CmaCh04G027710.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G027710.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	KH domain-containing protein
Location	Cma_Chr04: 18620450 .. 18624965 (+)
Sequence length	3580
RNA-Seq Expression	CmaCh04G027710.1
Synteny	CmaCh04G027710.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGGTCAGAGGAACAGTTATGGAAAACGGAACCATTCTCAGTCTGATTATGCTGAAAATGGAGGGAACAGACGAAGAAGTCATGGTGATGACCGAGACCAGTTTGTCATAGATCCAGAGGATACTGTTTACCGGTATTTGTGCCCTGTAAAAAAGATTGGTAGTGTTATTGGAAGAGGAGGGGAGATAGTGAAGCAGTTAAGGATAGATACTAAATCAAAGATTAGAATTGGAGAAACAGTGCCTGGATGTGATGAGCGTGTTATAACTATCTACAGTCCAAGCAATGAGATTAATTCCATGGAAGATAGTGATTATGTTTCTCCTGCTCAGGAGGCCTTGTTTAAAGTGCATGATAGAGTTGTGGCTGATGACTTAAATGAGGAGGAATCTGAGGGAGGAGGTCCCCATGTCACAGCGAGAATTCTTGTACCATCTGATCAAATTGGTTGTATTATTGGGAAAGGTGGACAGATTGTGCAGAATATTCGCACTGAGACTGGGGCACTGGTTCGAATTCTTAAGGATGATCATTTGCCACGTTGTGCTCTGAATTCTGATGAACTTGTACAGGTAAGTGGATGGATTTACCAAATGTTTTTGCTCCTTTACAGTATTTATTTAGTTGAAGTTATGTGTTTCAGGTTTCTGGTGAACCCTCGATTGTGAAGAAAGCCTTGTACCAGATTGCATCTCGACTGCATGACAATCCATCACGATCTCAGCATCTACTTGCTTCTGCCATACCTGGTGTCTATGCTTCTGGTGGTTCAATTTTGGCTCCCACACATGGTGCTCCAATAATGGGATTAGCCCCATTGGTTGGTCCGTATGGAGGTTATAAAGGTGATAGTGGTAATTGGTCCAGGTCTTTATATTCAGCTCCAAGAGAAGAATTGTCTTCAGCAAAAGAGTTTTCTCTCCGACTGGTATGTCCAAGTGAAAATATTGGAGGTGTCATTGGAAAAGGTGGAGCCGTAATCAATCAAATTAGACAGGAGACTAAGGCTGCCATAAAAGTTGATAGTTCTACTGAAGGAGATGATAGCTTGATTAATATTTCATCTAAGGAGGTTTAATCTAATCTTTTATTTCTCTGTTTTTGTTGGCTGTGGATTATAATTCTGACATCTTTGTTACTGCTTCAGTTCTTTGAAGATTCATATTCTCCCACATTGGAAGCTGCATTGCGCTTGCAACCAAGATGCAGTGAGAAAGTAGAAAGAGATTCTGGGATTATTTCATTCACAACCCGCCTGCTTGTGCCTACATCACGAATTGGTTGCCTAATTGGTAAAGGTGGAGCTATCATTACTGAGTTGAGAAGGCTCACCAAAGCTAATATTCGAATACTGTCAAAAGAGAACCTTCCTAAGGTTGCCTTGGAGGATGATGAAATGGTGCAGGTAGTCACTGTTAATTGATTGATATTCATTTTCTTGTCGTGATAAACTCATATGTTTCATATGGCTTGGGTTGGTTTGGGTTAATTTGGTTTGTTTTTATGATTAGATATCTGGGGATCTTGATGTCGCCAAGGAGGCTCTTGTACATATAGTGACTAGGCTAAGAGCCAACCTTTTTGATAGAGAAGGTGCTCTCTCTGCTATGCTGCCTGTTCTGCCTTATCTTCCCCTATCAGCTGATGGTTCAGATAGTCTAAATTATGATGGGAGAGATAGTAAAAGACATGGGCGTGGACATTCTTATTCTAGTGGTTATGGGGGTTTCAGTGATTTGGCTGCTGGTGATGGTTATGGAAGTTACAGTGGTTCACAGGTATGTATATTATCCTTGACACATATAATGCCAGATAAAGTTTTGAAAATTTCCACCTATCTGCCTTTAATTGAAAATAAATTCATTTTTCATCTTGATATTTAACTTATTATTGGTCAAAATCTAACGACCCAACATCTAATTTGCAACTAAAGCCAACCTTTTTCTTTGTAGATTGGTGGTGGTGGTGGTAATGCATACGGGGCCTATGGAAATTTTTCTATGGGACGAAGTGGTAGCTCAGGGTAAATTATTCTCTTCATCTCCATTTCTTGTTGTCAATCTAGAAAGCAGGAAAAATTATTTGGATTGACCTTCTGCAGTTGGTGCACCTATTAATTATTTTGTCAAATCTTGCATATCTTTATAAGCATTATGATCAGATTTAATTAGTTAATGTATAGGTAGTGTATAACATTAGTTAGTTCATGTATAGAAAGTGTATATCTTTATAAGCATTATGAATCGATTTTAATTTTTCCTTAGGGTTTCTGGACATGGCAGTGAACCTCGGAGGAGAAATTATTCCTAGCTTGGCAGTCATTATTTACTGGTATGTTATTCTCTTCTCCCTTGGGGTAGGAATAAAGAGAGAAAATATGGAAGAAAAGATAACTTCACCTGTTCTATAACGCTAGCCAAAGAACCACTGACAATTGTTAGTTTGATAAACATAAGCTATCCGGTCTCCCTATGCTCAAAATTCTGATACAATTATTTTCCCCTTGCCTTTCCCTTCCCATTAAAACAGCTGAGATTTATGAAGCCTGAGGCCAGCCTACTGCCTTAACCTGAAGATCAGATGAACCAGCGTTTGACATATTCATGGCCCACCTTGATGCTACCTTTAGTCGGACTATGCCTGAAGATCTTGTTGACTCTTAATTCTAACTCGTCCACACACCAAGATGACCATGAATAAAATCTTGAGCTCCTAAGAACCTACTAGCCAAAATTCCTGGGTTTTTTTGTTGTTTTTTCCTGCACAAATATTGAACTATGAAACCATGTTTACTTCCGCAATGGACACCCGTGGAGTTTTCGTTTTGTGTGGTTTTACTACTATAAGATTTGTTTATAATTCACGATGTCAAGGAAGTTCCTTTTCTTTTTTCTTTTCTATTCTTTTTTACCATGGATTGCAGCCCATATCTGCATCGTTCACCTGAATTGTGCAGGGATTAAGTGTCATACCCTGCTCTCTTGCACCCAACAGTCATTCATTTTTATGGCGATATAACATCCCTACTTTAGACTTATTAATTTCTGAAAAAAAGAAAGGGTTTTCTTATTTAGTAGCAAGAGTACTCTACTCAGGGGTAGCGTGTTTGATCCTTTGAGTGAACTTAATAAGAAAAACCTTTGATGTCTTTTTGGTCTAGGCCTGGAAGTGGGCTGGGGTGTGCCTCTAGATTACTGGGTTGAGGTCCCTAATGCCGGGTTATTTGAAAAAAAAAAAAAAAAAAAATTATCAAGTCCCAACAGTGTTGTTTCAGAATATGGAATGAGCATAACAAAAGAGGTCAGATCGTTTTATAGTTCTTCAAGATATAGCTATTGAACTTTGTGAAATTGGAAATAATATGTGGCTTAAAGATGTATTCGATCCTTTGAATGAAATAACTTGTTGCATAGCTTGTCGAAACCTGCCATACATCTTTTATGATCTCTTTTGTCCATTTCTAAGCTTCTGTAAAAACCCTTTAGTTTTCACCACCAGACTTGATTTTTTATTTCAACATCATTCTGCCATTTGAAGTACGGCAGGGCAGATATTTATACCATCGTTCCACAACAACACACGACAACCTTTACCTCTTATAGCCACGCTAAAACATGCTGTTTTAGTTTTTCCATAAAGTGGAAGGCTATATTATGCCAAGCCGGTGTCTTATTCTATACTTGACTGGGTAAAGGTAAGAGCAGTTATAGTTTGAGAATGCATTGCTTTTTTTATTGCTTATACTGTCTGTCAGGCTATCTTATGCCATGCATTTTGTTTTCTTTTTTCTGTGTTCTAATTTCATATTGGATATACAGTACTTTATCTTCAAAGGACTGTTATCTTTTGTTAACGTATCTATGTACTGGGTTACTCGCAAAAAAGCACCTCTTCTTCTATGGAAGGACATAACATTCTCTGACCTTGGACATGGTCTATGCTAACATGGAAACTTCTGTTGTAGCTAGAACTGTTGTAAGAACCGTGCTGGTCTCATGGCTAGTATTAGCTGTTGCTGAATGTAACTGGATTTTAATCCTTTAGAAAATAAAGGTTAGGTAAACTTCGTCAGTACTACAGATTGTCAGTATTCGGAACAAAACTGAGTTCTTTTGATCTTTTAGAGTCGTCTTCAAGGTAGATGGTTGCTTCTTGGGGACAGAGACTTAACATGGCCTGTCTACAATCAATTCGAAGATTAATTCAGAGCTGATGGATAGAATCATGGATAGAATTATATGTTGATTGAATTGAGACTGAAGTTAAATGGGTAAGAATCTGTATTTTTTTTTTCAATAGAATTATTTCAATGTTTTATTGTTCGAAATTTAGAATTCATTATAATGAATAATATTGCGTTACAATTTCTAATGTGCATATGGTCAGTATGAAACAATAGCCTTTAGTATTGTAACCTACTTCTATATTAAGGCAAATGTTCCCACACTTGGGTTTTCTGAGAGGTTGTGGCTATTGATCAAGTTGAACACCCTAATTGGTTTTGTTAGCTAC

mRNA sequence

ATGGCTGGTCAGAGGAACAGTTATGGAAAACGGAACCATTCTCAGTCTGATTATGCTGAAAATGGAGGGAACAGACGAAGAAGTCATGGTGATGACCGAGACCAGTTTGTCATAGATCCAGAGGATACTGTTTACCGGTATTTGTGCCCTGTAAAAAAGATTGGTAGTGTTATTGGAAGAGGAGGGGAGATAGTGAAGCAGTTAAGGATAGATACTAAATCAAAGATTAGAATTGGAGAAACAGTGCCTGGATGTGATGAGCGTGTTATAACTATCTACAGTCCAAGCAATGAGATTAATTCCATGGAAGATAGTGATTATGTTTCTCCTGCTCAGGAGGCCTTGTTTAAAGTGCATGATAGAGTTGTGGCTGATGACTTAAATGAGGAGGAATCTGAGGGAGGAGGTCCCCATGTCACAGCGAGAATTCTTGTACCATCTGATCAAATTGGTTGTATTATTGGGAAAGGTGGACAGATTGTGCAGAATATTCGCACTGAGACTGGGGCACTGGTTCGAATTCTTAAGGATGATCATTTGCCACGTTGTGCTCTGAATTCTGATGAACTTGTACAGGTTTCTGGTGAACCCTCGATTGTGAAGAAAGCCTTGTACCAGATTGCATCTCGACTGCATGACAATCCATCACGATCTCAGCATCTACTTGCTTCTGCCATACCTGGTGTCTATGCTTCTGGTGGTTCAATTTTGGCTCCCACACATGGTGCTCCAATAATGGGATTAGCCCCATTGGTTGGTCCGTATGGAGGTTATAAAGGTGATAGTGGTAATTGGTCCAGGTCTTTATATTCAGCTCCAAGAGAAGAATTGTCTTCAGCAAAAGAGTTTTCTCTCCGACTGGTATGTCCAAGTGAAAATATTGGAGGTGTCATTGGAAAAGGTGGAGCCGTAATCAATCAAATTAGACAGGAGACTAAGGCTGCCATAAAAGTTGATAGTTCTACTGAAGGAGATGATAGCTTGATTAATATTTCATCTAAGGAGTTCTTTGAAGATTCATATTCTCCCACATTGGAAGCTGCATTGCGCTTGCAACCAAGATGCAGTGAGAAAGTAGAAAGAGATTCTGGGATTATTTCATTCACAACCCGCCTGCTTGTGCCTACATCACGAATTGGTTGCCTAATTGGTAAAGGTGGAGCTATCATTACTGAGTTGAGAAGGCTCACCAAAGCTAATATTCGAATACTGTCAAAAGAGAACCTTCCTAAGGTTGCCTTGGAGGATGATGAAATGGTGCAGATATCTGGGGATCTTGATGTCGCCAAGGAGGCTCTTGTACATATAGTGACTAGGCTAAGAGCCAACCTTTTTGATAGAGAAGGTGCTCTCTCTGCTATGCTGCCTGTTCTGCCTTATCTTCCCCTATCAGCTGATGGTTCAGATAGTCTAAATTATGATGGGAGAGATAGTAAAAGACATGGGCGTGGACATTCTTATTCTAGTGGTTATGGGGGTTTCAGTGATTTGGCTGCTGGTGATGGTTATGGAAGTTACAGTGGTTCACAGATTGGTGGTGGTGGTGGTAATGCATACGGGGCCTATGGAAATTTTTCTATGGGACGAAGTGGTAGCTCAGGGGTTTCTGGACATGGCAGTGAACCTCGGAGGAGAAATTATTCCTAGCTTGGCAGTCATTATTTACTGCTGAGATTTATGAAGCCTGAGGCCAGCCTACTGCCTTAACCTGAAGATCAGATGAACCAGCGTTTGACATATTCATGGCCCACCTTGATGCTACCTTTAGTCGGACTATGCCTGAAGATCTTGTTGACTCTTAATTCTAACTCGTCCACACACCAAGATGACCATGAATAAAATCTTGAGCTCCTAAGAACCTACTAGCCAAAATTCCTGGGTTTTTTTGTTGTTTTTTCCTGCACAAATATTGAACTATGAAACCATGTTTACTTCCGCAATGGACACCCGTGGAGTTTTCGTTTTGTGTGGTTTTACTACTATAAGATTTGTTTATAATTCACGATGTCAAGGAAGTTCCTTTTCTTTTTTCTTTTCTATTCTTTTTTACCATGGATTGCAGCCCATATCTGCATCGTTCACCTGAATTGTGCAGGGATTAAGTGTCATACCCTGCTCTCTTGCACCCAACAGTCATTCATTTTTATGGCGATATAACATCCCTACTTTAGACTTATTAATTTCTGAAAAAAAGAAAGGGTTTTCTTATTTAGTAGCAAGAGTACTCTACTCAGGGGTAGCGTGTTTGATCCTTTGAGTGAACTTAATAAGAAAAACCTTTGATGTCTTTTTGGTCTAGGCCTGGAAGTGGGCTGGGGTGTGCCTCTAGATTACTGGGTTGAGGTCCCTAATGCCGGGTTATTTGAAAAAAAAAAAAAAAAAAAATTATCAAGTCCCAACAGTGTTGTTTCAGAATATGGAATGAGCATAACAAAAGAGGTCAGATCGTTTTATAGTTCTTCAAGATATAGCTATTGAACTTTGTGAAATTGGAAATAATATGTGGCTTAAAGATGTATTCGATCCTTTGAATGAAATAACTTGTTGCATAGCTTGTCGAAACCTGCCATACATCTTTTATGATCTCTTTTGTCCATTTCTAAGCTTCTGTAAAAACCCTTTAGTTTTCACCACCAGACTTGATTTTTTATTTCAACATCATTCTGCCATTTGAAGTACGGCAGGGCAGATATTTATACCATCGTTCCACAACAACACACGACAACCTTTACCTCTTATAGCCACGCTAAAACATGCTGTTTTAGTTTTTCCATAAAGTGGAAGGCTATATTATGCCAAGCCGGTGTCTTATTCTATACTTGACTGGGTAAAGGTAAGAGCAGTTATAGTTTGAGAATGCATTGCTTTTTTTATTGCTTATACTGTCTGTCAGGCTATCTTATGCCATGCATTTTGTTTTCTTTTTTCTGTGTTCTAATTTCATATTGGATATACAGTACTTTATCTTCAAAGGACTGTTATCTTTTGTTAACGTATCTATGTACTGGGTTACTCGCAAAAAAGCACCTCTTCTTCTATGGAAGGACATAACATTCTCTGACCTTGGACATGGTCTATGCTAACATGGAAACTTCTGTTGTAGCTAGAACTGTTGTAAGAACCGTGCTGGTCTCATGGCTAGTATTAGCTGTTGCTGAATGTAACTGGATTTTAATCCTTTAGAAAATAAAGAGTCGTCTTCAAGGTAGATGGTTGCTTCTTGGGGACAGAGACTTAACATGGCCTGTCTACAATCAATTCGAAGATTAATTCAGAGCTGATGGATAGAATCATGGATAGAATTATATGTTGATTGAATTGAGACTGAAGTTAAATGGGTAAGAATCTGTATTTTTTTTTTCAATAGAATTATTTCAATGTTTTATTGTTCGAAATTTAGAATTCATTATAATGAATAATATTGCGTTACAATTTCTAATGTGCATATGGTCAGTATGAAACAATAGCCTTTAGTATTGTAACCTACTTCTATATTAAGGCAAATGTTCCCACACTTGGGTTTTCTGAGAGGTTGTGGCTATTGATCAAGTTGAACACCCTAATTGGTTTTGTTAGCTAC

Coding sequence (CDS)

ATGGCTGGTCAGAGGAACAGTTATGGAAAACGGAACCATTCTCAGTCTGATTATGCTGAAAATGGAGGGAACAGACGAAGAAGTCATGGTGATGACCGAGACCAGTTTGTCATAGATCCAGAGGATACTGTTTACCGGTATTTGTGCCCTGTAAAAAAGATTGGTAGTGTTATTGGAAGAGGAGGGGAGATAGTGAAGCAGTTAAGGATAGATACTAAATCAAAGATTAGAATTGGAGAAACAGTGCCTGGATGTGATGAGCGTGTTATAACTATCTACAGTCCAAGCAATGAGATTAATTCCATGGAAGATAGTGATTATGTTTCTCCTGCTCAGGAGGCCTTGTTTAAAGTGCATGATAGAGTTGTGGCTGATGACTTAAATGAGGAGGAATCTGAGGGAGGAGGTCCCCATGTCACAGCGAGAATTCTTGTACCATCTGATCAAATTGGTTGTATTATTGGGAAAGGTGGACAGATTGTGCAGAATATTCGCACTGAGACTGGGGCACTGGTTCGAATTCTTAAGGATGATCATTTGCCACGTTGTGCTCTGAATTCTGATGAACTTGTACAGGTTTCTGGTGAACCCTCGATTGTGAAGAAAGCCTTGTACCAGATTGCATCTCGACTGCATGACAATCCATCACGATCTCAGCATCTACTTGCTTCTGCCATACCTGGTGTCTATGCTTCTGGTGGTTCAATTTTGGCTCCCACACATGGTGCTCCAATAATGGGATTAGCCCCATTGGTTGGTCCGTATGGAGGTTATAAAGGTGATAGTGGTAATTGGTCCAGGTCTTTATATTCAGCTCCAAGAGAAGAATTGTCTTCAGCAAAAGAGTTTTCTCTCCGACTGGTATGTCCAAGTGAAAATATTGGAGGTGTCATTGGAAAAGGTGGAGCCGTAATCAATCAAATTAGACAGGAGACTAAGGCTGCCATAAAAGTTGATAGTTCTACTGAAGGAGATGATAGCTTGATTAATATTTCATCTAAGGAGTTCTTTGAAGATTCATATTCTCCCACATTGGAAGCTGCATTGCGCTTGCAACCAAGATGCAGTGAGAAAGTAGAAAGAGATTCTGGGATTATTTCATTCACAACCCGCCTGCTTGTGCCTACATCACGAATTGGTTGCCTAATTGGTAAAGGTGGAGCTATCATTACTGAGTTGAGAAGGCTCACCAAAGCTAATATTCGAATACTGTCAAAAGAGAACCTTCCTAAGGTTGCCTTGGAGGATGATGAAATGGTGCAGATATCTGGGGATCTTGATGTCGCCAAGGAGGCTCTTGTACATATAGTGACTAGGCTAAGAGCCAACCTTTTTGATAGAGAAGGTGCTCTCTCTGCTATGCTGCCTGTTCTGCCTTATCTTCCCCTATCAGCTGATGGTTCAGATAGTCTAAATTATGATGGGAGAGATAGTAAAAGACATGGGCGTGGACATTCTTATTCTAGTGGTTATGGGGGTTTCAGTGATTTGGCTGCTGGTGATGGTTATGGAAGTTACAGTGGTTCACAGATTGGTGGTGGTGGTGGTAATGCATACGGGGCCTATGGAAATTTTTCTATGGGACGAAGTGGTAGCTCAGGGGTTTCTGGACATGGCAGTGAACCTCGGAGGAGAAATTATTCCTAG

Protein sequence

MAGQRNSYGKRNHSQSDYAENGGNRRRSHGDDRDQFVIDPEDTVYRYLCPVKKIGSVIGRGGEIVKQLRIDTKSKIRIGETVPGCDERVITIYSPSNEINSMEDSDYVSPAQEALFKVHDRVVADDLNEEESEGGGPHVTARILVPSDQIGCIIGKGGQIVQNIRTETGALVRILKDDHLPRCALNSDELVQVSGEPSIVKKALYQIASRLHDNPSRSQHLLASAIPGVYASGGSILAPTHGAPIMGLAPLVGPYGGYKGDSGNWSRSLYSAPREELSSAKEFSLRLVCPSENIGGVIGKGGAVINQIRQETKAAIKVDSSTEGDDSLINISSKEFFEDSYSPTLEAALRLQPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAMLPVLPYLPLSADGSDSLNYDGRDSKRHGRGHSYSSGYGGFSDLAAGDGYGSYSGSQIGGGGGNAYGAYGNFSMGRSGSSGVSGHGSEPRRRNYS

Homology

[Close]

BLAST of CmaCh04G027710.1 vs. ExPASy Swiss-Prot
Match: Q8W4B1 (RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana OX=3702 GN=RCF3 PE=1 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 6.5e-54
Identity = 154/468 (32.91%), Postives = 243/468 (51.92%), Query Frame = 0


Query: 9   GKRNHSQSDYAENGGNRRRSHGDDRDQFVIDPEDTVYRYLCPVKKIGSVIGRGGEIVKQL 68
           G  N  +      GGN R S              T YR LC   K G VIG+ G I+K +
Sbjct: 39  GGNNRYRGGGGGGGGNGRPSKSHPETM-----ATTTYRILCHDAKAGGVIGKSGTIIKSI 98

Query: 69  RIDTKSKIRIGETVPGCDERVITIYSPSNEINSMEDSD----YVSPAQEALFKVHDRVVA 128
           R  T + I + E VPG  ER+I I       N   D D      SPAQEALF VHDR++ 
Sbjct: 99  RQHTGAWINVHELVPGDAERIIEISD-----NRRRDPDGRMPSFSPAQEALFSVHDRILE 158

Query: 129 DDL---------NEEESEG----GGPHVTARILVPSDQIGCIIGKGGQIVQNIRTETGAL 188
            +           EEE  G    GG  V  R++V    +GC++GKGG+I++ +R ET   
Sbjct: 159 SEAQFGYGGPPPEEEEDYGGVRPGGGRVVTRLVVSRMHVGCLLGKGGKIIEQMRIETKTH 218

Query: 189 VRIL-KDDHLPRCALNSDELVQVSGEPSIVKKALYQIASRLHDNPSRSQHLLASAIPG-- 248
           +RIL ++ +LPRC   S+E+VQ+ GE + VK AL  ++SRL +    SQH   S   G  
Sbjct: 219 IRILPRESNLPRCVSLSEEIVQIVGELNAVKNALAIVSSRLRE----SQHRDRSNFQGRS 278

Query: 249 -----VYASGGSILAPTHGAPIMGLAPLVGPYGGYKGDS-----GNWSRSLYSAPREELS 308
                 +A+ G    P     +   +    P G ++ ++      N++    + P  E  
Sbjct: 279 HSPERSFAAAGDDYMP----QLRRQSSDRFPRGNFRNNNFSSRQSNYAEEAPAVPVGENV 338

Query: 309 SAKEFSLRLVCPSENIGGVIGKGGAVINQIRQETKAAIKVDSSTEG-DDSLINISSKEFF 368
            ++E   +++CP++ I  V+G+   +I+ ++ E    ++V     G D+ +I ISS+E  
Sbjct: 339 YSEELVFQILCPADKIVRVVGESQGIIDLLQNEIGVDVRVSDPVAGSDEQIITISSEEAP 398

Query: 369 EDSYSPTLEAALRLQPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLT 428
           +D + P  EA L +Q +  + +     +I  TTRLLVP+    CL GK G+ ++E+ RLT
Sbjct: 399 DDPFFPAQEALLHIQTQIIDLIPDKDNLI--TTRLLVPSRDSICLEGKAGS-VSEISRLT 458

Query: 429 KANIRILSKENLPKVALEDDEMVQISGDLDVAKEALVHIVTRLRANLF 446
             +++IL++E +P+ A  +D ++QI+G++  A+EALV +   LR+++F
Sbjct: 459 GTSVQILAREEIPRCASINDVVIQITGEIRAAREALVELTLLLRSHMF 485

[Close]

BLAST of CmaCh04G027710.1 vs. ExPASy Swiss-Prot
Match: P58223 (KH domain-containing protein At4g18375 OS=Arabidopsis thaliana OX=3702 GN=At4g18375 PE=2 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 2.4e-48
Identity = 173/565 (30.62%), Postives = 285/565 (50.44%), Query Frame = 0


Query: 10  KRNHSQSDYAENGGNRRRSHGDDRDQFVIDPEDTVYRYLCPVKKIGSVIGRGGEIVKQLR 69
           KR   Q + +E+  N++R    D+   +   E  VYR LCP+  +G VIG+ G+++  +R
Sbjct: 6   KRKQIQRNNSESNRNQKRRISHDK---INRDELVVYRILCPIDVVGGVIGKSGKVINAIR 65

Query: 70  IDTKSKIRIGETVPGCDERVITIYSPSNEIN-----SMEDSDYVSPAQEALFKVHDRVVA 129
            +TK+KI++ + + GC +RVITIY    E       +  +++ +  AQ+AL KV+D +VA
Sbjct: 66  HNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEIGFTKSENEPLCCAQDALLKVYDAIVA 125

Query: 130 DD--LNEEESEGGGPHVTARILVPSDQIGCIIGKGGQIVQNIRTETGALVRILKDD---- 189
            D   N + +     +   R+LVP  Q   +IGK G+ ++ IR  T A V+++  D    
Sbjct: 126 SDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDP 185

Query: 190 -HLPRCALNSDELVQVSGEPSIVKKALYQIASRLHD-NP-------SRSQHLLASAI--- 249
            H+  CA+  D +V +SGEP  VK+AL+ +++ ++  NP       S SQ + A+++   
Sbjct: 186 SHV--CAMEYDNVVVISGEPESVKQALFAVSAIMYKINPRENIPLDSTSQDVPAASVIVP 245

Query: 250 ----------PGVYASGGSILAPTHGAPIMGLAPLVGPYGGYKGDSGN----WSRSL-YS 309
                      G Y++   IL    G P    A  V  + GY   + N    ++ SL  +
Sbjct: 246 SDLSNSVYPQTGFYSNQDHILQQGAGVPSYFNALSVSDFQGYAETAANPVPVFASSLPVT 305

Query: 310 APREELSSAKEFSLRLVCPSENIGGVIGKGGAVINQIRQETKAAIKV-DSSTE-GDDS-L 369
                 S ++E   +++CP  NI  VIGKGG+ I +IR+ + + I+V DS T+ GDD  +
Sbjct: 306 HGFGGSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECV 365

Query: 370 INISSKEFFEDSYSPTLEAALRLQPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGA 429
           I +++ E  +D  S  +EA L LQ     +   D    +   +LLV +  IGC+IGK G+
Sbjct: 366 IIVTATESPDDMKSMAVEAVLLLQ-----EYINDEDAENVKMQLLVSSKVIGCVIGKSGS 425

Query: 430 IITELRRLTKANIRILSKENLPKVALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDRE 489
           +I E+R+ T ANI I   +         D++V++SG++   ++AL+ IV RLR ++   +
Sbjct: 426 VINEIRKRTNANICISKGKK--------DDLVEVSGEVSSVRDALIQIVLRLREDVLGDK 485

Query: 490 GALSAMLPVLPYLPLSADGSDSLNYDGRDSKRHGRGHSYSSGYGGFSDLAAGDGYGSYSG 534
            +++   P     P   D    L      S     G++  S     +  +   GYGS+  
Sbjct: 486 DSVATRKP-----PARTDNCSFL------SGSSNAGYTLPSFMSSMASTSGFHGYGSFP- 535

[Close]

BLAST of CmaCh04G027710.1 vs. ExPASy Swiss-Prot
Match: F4KDN0 (KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 5.5e-37
Identity = 162/627 (25.84%), Postives = 248/627 (39.55%), Query Frame = 0


Query: 4   QRNS---YGKRNHSQSDYAENGGNRRR---SHGDDRDQFVIDPEDTVYRYLCPVKKIGSV 63
           +RNS   + ++     D     G+ +R    H       V+      +R LCP+  +G+V
Sbjct: 2   ERNSVKFHAEKRSGAFDPGSGFGSSKRVKTHHTQLLSALVVPVGHAAFRLLCPLSHVGAV 61

Query: 64  IGRGGEIVKQLRIDTKSKIRIGETVPGCDERVITIYSPSN---------------EINSM 123
           IG+ G ++KQL+  T +KIR+ E   G  +RVITI + ++               E    
Sbjct: 62  IGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKLGANNNGNAEGEKK 121

Query: 124 EDSDYVSPAQEALFKVHDRVVADDLNEEESEGGGPHVTARILVPSDQIGCIIGKGGQIVQ 183
           E+   VS AQ AL KV + + A        E     V  R+L  S   G +IGKGGQ+V 
Sbjct: 122 EEEVEVSKAQGALIKVFELLAA--------EADSDTVVCRLLTESSHAGAVIGKGGQMVG 181

Query: 184 NIRTETGALVRILKDDHLPRCALNSDELVQVSGEPSIVKKALYQIASRLHDNPS------ 243
           +IR ETG  + I + ++LP CA   DE+V+V G    VKKAL  I+  L +  S      
Sbjct: 182 SIRKETGCKISI-RIENLPICADTDDEMVEVEGNAIAVKKALVSISRCLQNCQSIDKVRM 241

Query: 244 -----------RSQH-----LLASAIP--------------------GVYASGGSIL--- 303
                       S H     ++  ++P                    G  A    ++   
Sbjct: 242 VGNRPLEKEFQASLHRPIETIIQESLPRSVEVNPYDYRLRNDEIFPRGTVARANDVIPHD 301

Query: 304 --------APTHGA---------------------------------------------- 363
                   A   GA                                              
Sbjct: 302 TLHLRRIEAVPQGALRMHIEADRQDVLRRHVEADRQDALRRRIDVVPQETLYMPSDVLRG 361

Query: 364 -------------------------PIMGLAPLVGPYGGY------------KGDSGNWS 423
                                      MG+     P   Y            +G S ++ 
Sbjct: 362 DCFRQHRERDDSHDSLHRPFEMVPRDAMGMPFESFPRDAYGRPIETMTQETLRGQSADYL 421

Query: 424 RSLYSA-----------------------PREELSSAKEFSLRLVCPSENIGGVIGKGGA 446
              YS                        P E     ++   +++C +EN GGVIG GG 
Sbjct: 422 AHRYSTLDTHPHSFTTSASMANTATMKPPPSEVEVGNQDVVFKILCSTENAGGVIGTGGK 481

[Close]

BLAST of CmaCh04G027710.1 vs. ExPASy Swiss-Prot
Match: Q9SR13 (Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 7.5e-26
Identity = 66/173 (38.15%), Postives = 105/173 (60.69%), Query Frame = 0


Query: 40  PEDTVYRYLCPVKKIGSVIGRGGEIVKQLRIDTKSKIRIGETVPGCDERVITIYSPSNEI 99
           P +TV+R L P +K+GS+IGR G+++K++  +T+++I+I +  PG  ER + +       
Sbjct: 184 PGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKE--- 243

Query: 100 NSMEDSDYVSPAQEALFKVHDRVVADDLNEEESEGGGP-HVTARILVPSDQIGCIIGKGG 159
              E    + P+ + L +VH R+V D L+ E S+   P  V+ R+LVP+ Q G +IGK G
Sbjct: 244 ---EPESSLPPSMDGLLRVHMRIV-DGLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQG 303

Query: 160 QIVQNIRTETGALVRILKDDHLPRCALNSDELVQVSGEPSIVKKALYQIASRL 212
             V+ I+  +  +VR+L  + LP  AL  D +V+V GEP+ V +AL  IAS L
Sbjct: 304 GTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHL 349

[Close]

BLAST of CmaCh04G027710.1 vs. ExPASy Swiss-Prot
Match: Q61990 (Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.8e-19
Identity = 92/333 (27.63%), Postives = 149/333 (44.74%), Query Frame = 0


Query: 46  RYLCPVKKIGSVIGRGGEIVKQLRIDTKSKIRIGETVPGCDERVITIYSPSNEINSMEDS 105
           R L   K++GS+IG+ GE VK++R ++ ++I I E    C ER+IT+  P+N        
Sbjct: 17  RLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTN-------- 76

Query: 106 DYVSPAQEALFKVHDRVVADDLNEEESE-------GGGPHVTARILVPSDQIGCIIGKGG 165
                   A+FK    ++ D L E+ S           P VT R++VP+ Q G +IGKGG
Sbjct: 77  --------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 136

Query: 166 QIVQNIRTETGALVRILKDDHLPRCALNSDELVQVSGEPSIVKKALYQIASRLHDNPSR- 225
             ++ IR  TGA V++   D LP    +++  + ++G P  + + + QI   + ++P + 
Sbjct: 137 CKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKG 196

Query: 226 ----------SQHLLASAIPGVYASGGSILAPTHGAPIMGLAP-LVGP------------ 285
                     S  ++ +     Y++G    +  H  P M L P L GP            
Sbjct: 197 VTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYA 256

Query: 286 ---------------YGGYKGDSGNWSRSLYSAPREEL--------SSAKEFSLRLVCPS 325
                             +    GN   S   +   E+        +SA+  S  L  P+
Sbjct: 257 IPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPN 316

[Close]

BLAST of CmaCh04G027710.1 vs. ExPASy TrEMBL
Match: A0A6J1JP17 (KH domain-containing protein HEN4-like OS=Cucurbita maxima OX=3661 GN=LOC111487058 PE=4 SV=1)

HSP 1 Score: 1063.1 bits (2748), Expect = 3.8e-307
Identity = 548/548 (100.00%), Postives = 548/548 (100.00%), Query Frame = 0


Query: 1   MAGQRNSYGKRNHSQSDYAENGGNRRRSHGDDRDQFVIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSYGKRNHSQSDYAENGGNRRRSHGDDRDQFVIDPEDTVYRYLCPVKKIGSVIGR
Sbjct: 1   MAGQRNSYGKRNHSQSDYAENGGNRRRSHGDDRDQFVIDPEDTVYRYLCPVKKIGSVIGR 60

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGCDERVITIYSPSNEINSMEDSDYVSPAQEALFKVHD 120
           GGEIVKQLRIDTKSKIRIGETVPGCDERVITIYSPSNEINSMEDSDYVSPAQEALFKVHD
Sbjct: 61  GGEIVKQLRIDTKSKIRIGETVPGCDERVITIYSPSNEINSMEDSDYVSPAQEALFKVHD 120

Query: 121 RVVADDLNEEESEGGGPHVTARILVPSDQIGCIIGKGGQIVQNIRTETGALVRILKDDHL 180
           RVVADDLNEEESEGGGPHVTARILVPSDQIGCIIGKGGQIVQNIRTETGALVRILKDDHL
Sbjct: 121 RVVADDLNEEESEGGGPHVTARILVPSDQIGCIIGKGGQIVQNIRTETGALVRILKDDHL 180

Query: 181 PRCALNSDELVQVSGEPSIVKKALYQIASRLHDNPSRSQHLLASAIPGVYASGGSILAPT 240
           PRCALNSDELVQVSGEPSIVKKALYQIASRLHDNPSRSQHLLASAIPGVYASGGSILAPT
Sbjct: 181 PRCALNSDELVQVSGEPSIVKKALYQIASRLHDNPSRSQHLLASAIPGVYASGGSILAPT 240

Query: 241 HGAPIMGLAPLVGPYGGYKGDSGNWSRSLYSAPREELSSAKEFSLRLVCPSENIGGVIGK 300
           HGAPIMGLAPLVGPYGGYKGDSGNWSRSLYSAPREELSSAKEFSLRLVCPSENIGGVIGK
Sbjct: 241 HGAPIMGLAPLVGPYGGYKGDSGNWSRSLYSAPREELSSAKEFSLRLVCPSENIGGVIGK 300

Query: 301 GGAVINQIRQETKAAIKVDSSTEGDDSLINISSKEFFEDSYSPTLEAALRLQPRCSEKVE 360
           GGAVINQIRQETKAAIKVDSSTEGDDSLINISSKEFFEDSYSPTLEAALRLQPRCSEKVE
Sbjct: 301 GGAVINQIRQETKAAIKVDSSTEGDDSLINISSKEFFEDSYSPTLEAALRLQPRCSEKVE 360

Query: 361 RDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMV 420
           RDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMV
Sbjct: 361 RDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMV 420

Query: 421 QISGDLDVAKEALVHIVTRLRANLFDREGALSAMLPVLPYLPLSADGSDSLNYDGRDSKR 480
           QISGDLDVAKEALVHIVTRLRANLFDREGALSAMLPVLPYLPLSADGSDSLNYDGRDSKR
Sbjct: 421 QISGDLDVAKEALVHIVTRLRANLFDREGALSAMLPVLPYLPLSADGSDSLNYDGRDSKR 480

Query: 481 HGRGHSYSSGYGGFSDLAAGDGYGSYSGSQIGGGGGNAYGAYGNFSMGRSGSSGVSGHGS 540
           HGRGHSYSSGYGGFSDLAAGDGYGSYSGSQIGGGGGNAYGAYGNFSMGRSGSSGVSGHGS
Sbjct: 481 HGRGHSYSSGYGGFSDLAAGDGYGSYSGSQIGGGGGNAYGAYGNFSMGRSGSSGVSGHGS 540

Query: 541 EPRRRNYS 549
           EPRRRNYS
Sbjct: 541 EPRRRNYS 548

[Close]

BLAST of CmaCh04G027710.1 vs. ExPASy TrEMBL
Match: A0A6J1H3Q6 (KH domain-containing protein HEN4-like OS=Cucurbita moschata OX=3662 GN=LOC111459820 PE=4 SV=1)

HSP 1 Score: 1052.4 bits (2720), Expect = 6.7e-304
Identity = 545/550 (99.09%), Postives = 547/550 (99.45%), Query Frame = 0


Query: 1   MAGQRNSYGKRNHSQSDYAENGGNRRRSHGDDRDQFVIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSYGKRNHSQSDYAENGGNRRRSHGDDRDQFVIDPEDTVYRYLCPVKKIGSVIGR
Sbjct: 1   MAGQRNSYGKRNHSQSDYAENGGNRRRSHGDDRDQFVIDPEDTVYRYLCPVKKIGSVIGR 60

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGCDERVITIYSPSNEINSMEDSDYVSPAQEALFKVHD 120
           GGEIVKQLRIDTKSKIRIGETVPGCDERVITIYSPSNEINSMEDSDYVSPAQEALFKVHD
Sbjct: 61  GGEIVKQLRIDTKSKIRIGETVPGCDERVITIYSPSNEINSMEDSDYVSPAQEALFKVHD 120

Query: 121 RVVADDLNEEESEGGGPHVTARILVPSDQIGCIIGKGGQIVQNIRTETGALVRILKDDHL 180
           RVVADDLNEEESEGGG HVTARILVPSDQIGCIIGKGGQIVQNIRTETGALVRILKDDHL
Sbjct: 121 RVVADDLNEEESEGGGHHVTARILVPSDQIGCIIGKGGQIVQNIRTETGALVRILKDDHL 180

Query: 181 PRCALNSDELVQVSGEPSIVKKALYQIASRLHDNPSRSQHLLASAIPGVYASGGSILAPT 240
           PRCALNSDELVQVSGEPSIVKKALYQIASRLHDNPSRSQHLLASAIPGVYASGGSILAPT
Sbjct: 181 PRCALNSDELVQVSGEPSIVKKALYQIASRLHDNPSRSQHLLASAIPGVYASGGSILAPT 240

Query: 241 HGAPIMGLAPLVGPYGGYKGDSGNWSRSLYSAPREELSSAKEFSLRLVCPSENIGGVIGK 300
           HGAPIMGLAPLVGPYGGYKGDSGNWSRSLYSAPREELSSAKEFSLRLVCPSENIGGVIGK
Sbjct: 241 HGAPIMGLAPLVGPYGGYKGDSGNWSRSLYSAPREELSSAKEFSLRLVCPSENIGGVIGK 300

Query: 301 GGAVINQIRQETKAAIKVDSSTEGDDSLINISSKEFFEDSYSPTLEAALRLQPRCSEKVE 360
           GGAVINQIRQETKAAIKVDSSTEGDDSLINISSKEFFEDSYSPTLEAALRLQPRCSEKVE
Sbjct: 301 GGAVINQIRQETKAAIKVDSSTEGDDSLINISSKEFFEDSYSPTLEAALRLQPRCSEKVE 360

Query: 361 RDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMV 420
           RDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMV
Sbjct: 361 RDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMV 420

Query: 421 QISGDLDVAKEALVHIVTRLRANLFDREGALSAMLPVLPYLPLSADGSDSLNYDGRDSKR 480
           QISGDLDVAKEALVHIVTRLRANLFDREGALSAMLPVLPYLPLSADGSDSLNYDGRDSKR
Sbjct: 421 QISGDLDVAKEALVHIVTRLRANLFDREGALSAMLPVLPYLPLSADGSDSLNYDGRDSKR 480

Query: 481 HGRGHSYSSGYGGFSDLAAGDGYGSYSGSQI--GGGGGNAYGAYGNFSMGRSGSSGVSGH 540
           HGRGHSYSSGYGGF+DLAAGDGYGSYSGSQI  GGGGGNAYGAYGNFSMGRSGSSGVSGH
Sbjct: 481 HGRGHSYSSGYGGFTDLAAGDGYGSYSGSQIGGGGGGGNAYGAYGNFSMGRSGSSGVSGH 540

Query: 541 GSEPRRRNYS 549
           G+EPRRRNYS
Sbjct: 541 GNEPRRRNYS 550

[Close]

BLAST of CmaCh04G027710.1 vs. ExPASy TrEMBL
Match: A0A6J1BXI3 (KH domain-containing protein HEN4 OS=Momordica charantia OX=3673 GN=LOC111006233 PE=4 SV=1)

HSP 1 Score: 980.3 bits (2533), Expect = 3.2e-282
Identity = 505/550 (91.82%), Postives = 532/550 (96.73%), Query Frame = 0


Query: 1   MAGQRNSYGKRNHSQSDYAENGGNRRRSHGDDRDQFVIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSYGKRNHSQSDYAENGGN+RR+HG+DRDQFVIDPEDTVYRYLCPVKKIGSVIGR
Sbjct: 1   MAGQRNSYGKRNHSQSDYAENGGNKRRTHGEDRDQFVIDPEDTVYRYLCPVKKIGSVIGR 60

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGCDERVITIYSPSNEINSMEDS-DYVSPAQEALFKVH 120
           GGEIVKQLRIDTKSKIRIGETVPG DERVITIYS SNEINS+E+S DYV PAQEALFK+H
Sbjct: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEINSLEESDDYVCPAQEALFKIH 120

Query: 121 DRVVADDLNEEESEGGGPHVTARILVPSDQIGCIIGKGGQIVQNIRTETGALVRILKDDH 180
           DRVVADDLN+EES+GGG  VTAR+LVPSDQIGCIIGKGGQIVQNIRTETGA +RILKDDH
Sbjct: 121 DRVVADDLNDEESDGGGHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGAQIRILKDDH 180

Query: 181 LPRCALNSDELVQVSGEPSIVKKALYQIASRLHDNPSRSQHLLASAIPGVYASGGSILAP 240
           LPRCAL+SDELVQ+SGE  IV+KALY+IASRLHDNPSRSQHLLASA+P VY+SGGS++ P
Sbjct: 181 LPRCALSSDELVQISGEALIVRKALYRIASRLHDNPSRSQHLLASAMPNVYSSGGSLVTP 240

Query: 241 THGAPIMGLAPLVGPYGGYKGDSGNWSRSLYSAPREELSSAKEFSLRLVCPSENIGGVIG 300
           THG PIMGLAPLVGPYGGYKGDSGNWSRSLYSAPREELSS+KEFSLRL+CP+ENIGGVIG
Sbjct: 241 THGGPIMGLAPLVGPYGGYKGDSGNWSRSLYSAPREELSSSKEFSLRLICPTENIGGVIG 300

Query: 301 KGGAVINQIRQETKAAIKVDSS-TEGDDSLINISSKEFFEDSYSPTLEAALRLQPRCSEK 360
           KGGA+INQIRQETKAAIKVDSS TEGDD LINISSKEFFEDSYSPTLEAALRLQPRCSEK
Sbjct: 301 KGGAIINQIRQETKAAIKVDSSATEGDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEK 360

Query: 361 VERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDE 420
           VERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDE
Sbjct: 361 VERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDE 420

Query: 421 MVQISGDLDVAKEALVHIVTRLRANLFDREGALSAMLPVLPYLPLSADGSDSLNYDGRDS 480
           MVQISGDLDVAKEALVH+VTRLRANLFDREGALSAMLPVLPYLPLSADGSDSL+YDGRD 
Sbjct: 421 MVQISGDLDVAKEALVHVVTRLRANLFDREGALSAMLPVLPYLPLSADGSDSLSYDGRDG 480

Query: 481 KRHGRGHSYSSGYGGFSDLAAGDGYGSYSGSQIGGGGGNAYGAYGNFSMGRSGSSGVSGH 540
           KRHGRGHSYSSGYGGF+DLAAGDGYGSYSGSQI GGGG+AYGAYG+FSMGRSGSSGVSGH
Sbjct: 481 KRHGRGHSYSSGYGGFNDLAAGDGYGSYSGSQI-GGGGSAYGAYGSFSMGRSGSSGVSGH 540

Query: 541 GSEPRRRNYS 549
           GS  RRRNYS
Sbjct: 541 GSVSRRRNYS 549

[Close]

BLAST of CmaCh04G027710.1 vs. ExPASy TrEMBL
Match: A0A0A0KVM1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636640 PE=4 SV=1)

HSP 1 Score: 971.1 bits (2509), Expect = 2.0e-279
Identity = 507/558 (90.86%), Postives = 530/558 (94.98%), Query Frame = 0


Query: 1   MAGQRNSYGKRNHSQSDYAENGGNRRRSHGDDRDQFVIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSYGKRNHSQSDY+ENGGN+RRSHG+DRDQFVID EDTVYRYLCPVKKIGSVIGR
Sbjct: 61  MAGQRNSYGKRNHSQSDYSENGGNKRRSHGEDRDQFVIDSEDTVYRYLCPVKKIGSVIGR 120

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGCDERVITIYSPSNEINSMED-SDYVSPAQEALFKVH 120
           GGEIVKQLRIDTKSKIRIGETVPG DERVITIYS SNE NS+E+ SDYVSPAQEALFK+H
Sbjct: 121 GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNETNSLEESSDYVSPAQEALFKIH 180

Query: 121 DRVVADDLNEEESEGGGPHVTARILVPSDQIGCIIGKGGQIVQNIRTETGALVRILKDDH 180
           DRVVADD  +E+SEGGG  VTAR+LVPSDQIGCIIGKGGQIVQNIRTETGA VRILKDDH
Sbjct: 181 DRVVADDYMDEDSEGGGHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGAQVRILKDDH 240

Query: 181 LPRCALNSDELVQVSGEPSIVKKALYQIASRLHDNPSRSQHLLASAIPGVYASGGSILAP 240
           LPRCAL+SDELVQ+SGEP IVKKALYQIASRLHDNPSRSQHLLASAIPGVY+SGGS++AP
Sbjct: 241 LPRCALSSDELVQISGEPLIVKKALYQIASRLHDNPSRSQHLLASAIPGVYSSGGSLMAP 300

Query: 241 THGAPIMGLAPLVGPYGGYKGDSGNWSRSLYSAPREELSSAKEFSLRLVCPSENIGGVIG 300
           THGAPIMGLAPLV PYGGYKGDSGNWSRSLYSAPRE+LSS KEFSLRL+CP+ENIGGVIG
Sbjct: 301 THGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREDLSS-KEFSLRLICPTENIGGVIG 360

Query: 301 KGGAVINQIRQETKAAIKVDSS-TEGDDSLINISSKEFFEDSYSPTLEAALRLQPRCSEK 360
           KGGA+INQIRQETKAAIKVDSS TEGDD LINISSKEFFEDSYSPTLEAALRLQPRCSEK
Sbjct: 361 KGGAIINQIRQETKAAIKVDSSATEGDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEK 420

Query: 361 VERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDE 420
           VERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDE
Sbjct: 421 VERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDE 480

Query: 421 MVQISGDLDVAKEALVHIVTRLRANLFDREGALSAMLPVLPYLPLSADGSDSLNYDGRDS 480
           MVQISGDLDVAKEALVHIVTRLRANLFDREGALSA+LPVLPYLPLSADGSDSL+YDGR+ 
Sbjct: 481 MVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREG 540

Query: 481 KRHGRGHSYSSGYGGFSDLAAGDGYGSYSGSQI--------GGGGGNAYGAYGNFSMGRS 540
           KRHGRGHSYSSGYGGF+DLA GDGYGSYSGSQI        GGGGG AYGAYGNFS+GRS
Sbjct: 541 KRHGRGHSYSSGYGGFNDLAGGDGYGSYSGSQIGGGGSGGGGGGGGGAYGAYGNFSVGRS 600

Query: 541 GSSGVSGHGSEPRRRNYS 549
           GSSGVSGHGS  RRRNYS
Sbjct: 601 GSSGVSGHGSVSRRRNYS 617

[Close]

BLAST of CmaCh04G027710.1 vs. ExPASy TrEMBL
Match: A0A1S3C9E7 (KH domain-containing protein At4g18375 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498494 PE=4 SV=1)

HSP 1 Score: 968.4 bits (2502), Expect = 1.3e-278
Identity = 504/557 (90.48%), Postives = 530/557 (95.15%), Query Frame = 0


Query: 1   MAGQRNSYGKRNHSQSDYAENGGNRRRSHGDDRDQFVIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSYGKRNHSQSDY+ENGGN+RRSHG+DRDQFVID EDTVYRYLCPVKKIGSVIGR
Sbjct: 1   MAGQRNSYGKRNHSQSDYSENGGNKRRSHGEDRDQFVIDSEDTVYRYLCPVKKIGSVIGR 60

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGCDERVITIYSPSNEINSMED-SDYVSPAQEALFKVH 120
           GGEIVKQLR+DTKSKIRIGETVPG DERVITIYS SNE NS+E+ SDYVSPAQEALFK+H
Sbjct: 61  GGEIVKQLRVDTKSKIRIGETVPGSDERVITIYSASNETNSLEESSDYVSPAQEALFKIH 120

Query: 121 DRVVADDLNEEESEGGGPHVTARILVPSDQIGCIIGKGGQIVQNIRTETGALVRILKDDH 180
           DRVVADD  +E+SEGGG  VTAR+LVPSDQIGCIIGKGGQIVQNIRTETGA VRILKDDH
Sbjct: 121 DRVVADDFMDEDSEGGGHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGAQVRILKDDH 180

Query: 181 LPRCALNSDELVQVSGEPSIVKKALYQIASRLHDNPSRSQHLLASAIPGVYASGGSILAP 240
           LPRCAL+SDELVQ+SGEP IVKKALYQIASRLHDNPSRSQHLLASAIPGVY+SGGS++A 
Sbjct: 181 LPRCALSSDELVQISGEPLIVKKALYQIASRLHDNPSRSQHLLASAIPGVYSSGGSLMAS 240

Query: 241 THGAPIMGLAPLVGPYGGYKGDSGNWSRSLYSAPREELSSAKEFSLRLVCPSENIGGVIG 300
           THGAPIMGLAPLV PYGGYKGDSGNWSRSLYSAPRE+LSS KEFSLRL+CP+ENIGGVIG
Sbjct: 241 THGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREDLSS-KEFSLRLICPTENIGGVIG 300

Query: 301 KGGAVINQIRQETKAAIKVDSS-TEGDDSLINISSKEFFEDSYSPTLEAALRLQPRCSEK 360
           KGGA+INQIRQETKAAIKVDSS TEGDD LINISSKEFFEDSYSPTLEAALRLQPRCSEK
Sbjct: 301 KGGAIINQIRQETKAAIKVDSSATEGDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEK 360

Query: 361 VERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDE 420
           VERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDE
Sbjct: 361 VERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDE 420

Query: 421 MVQISGDLDVAKEALVHIVTRLRANLFDREGALSAMLPVLPYLPLSADGSDSLNYDGRDS 480
           MVQISGDLDVAKEAL+HIVTRLRANLFDREGALSA+LPVLPYLPLSADGSDSL+YDGR+ 
Sbjct: 421 MVQISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREG 480

Query: 481 KRHGRGHSYSSGYGGFSDLAAGDGYGSYSGSQI-------GGGGGNAYGAYGNFSMGRSG 540
           KRHGRGHSYSSGYGGF+DLA GDGYGSYSGSQI       GGGGG+AYGAYGNFS+GRSG
Sbjct: 481 KRHGRGHSYSSGYGGFNDLAGGDGYGSYSGSQIGSGGSGGGGGGGSAYGAYGNFSVGRSG 540

Query: 541 SSGVSGHGSEPRRRNYS 549
           SSGVSGHGS  RRRNYS
Sbjct: 541 SSGVSGHGSVSRRRNYS 556

[Close]

BLAST of CmaCh04G027710.1 vs. NCBI nr
Match: XP_022990045.1 (KH domain-containing protein HEN4-like [Cucurbita maxima])

HSP 1 Score: 1063.1 bits (2748), Expect = 7.8e-307
Identity = 548/548 (100.00%), Postives = 548/548 (100.00%), Query Frame = 0


Query: 1   MAGQRNSYGKRNHSQSDYAENGGNRRRSHGDDRDQFVIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSYGKRNHSQSDYAENGGNRRRSHGDDRDQFVIDPEDTVYRYLCPVKKIGSVIGR
Sbjct: 1   MAGQRNSYGKRNHSQSDYAENGGNRRRSHGDDRDQFVIDPEDTVYRYLCPVKKIGSVIGR 60

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGCDERVITIYSPSNEINSMEDSDYVSPAQEALFKVHD 120
           GGEIVKQLRIDTKSKIRIGETVPGCDERVITIYSPSNEINSMEDSDYVSPAQEALFKVHD
Sbjct: 61  GGEIVKQLRIDTKSKIRIGETVPGCDERVITIYSPSNEINSMEDSDYVSPAQEALFKVHD 120

Query: 121 RVVADDLNEEESEGGGPHVTARILVPSDQIGCIIGKGGQIVQNIRTETGALVRILKDDHL 180
           RVVADDLNEEESEGGGPHVTARILVPSDQIGCIIGKGGQIVQNIRTETGALVRILKDDHL
Sbjct: 121 RVVADDLNEEESEGGGPHVTARILVPSDQIGCIIGKGGQIVQNIRTETGALVRILKDDHL 180

Query: 181 PRCALNSDELVQVSGEPSIVKKALYQIASRLHDNPSRSQHLLASAIPGVYASGGSILAPT 240
           PRCALNSDELVQVSGEPSIVKKALYQIASRLHDNPSRSQHLLASAIPGVYASGGSILAPT
Sbjct: 181 PRCALNSDELVQVSGEPSIVKKALYQIASRLHDNPSRSQHLLASAIPGVYASGGSILAPT 240

Query: 241 HGAPIMGLAPLVGPYGGYKGDSGNWSRSLYSAPREELSSAKEFSLRLVCPSENIGGVIGK 300
           HGAPIMGLAPLVGPYGGYKGDSGNWSRSLYSAPREELSSAKEFSLRLVCPSENIGGVIGK
Sbjct: 241 HGAPIMGLAPLVGPYGGYKGDSGNWSRSLYSAPREELSSAKEFSLRLVCPSENIGGVIGK 300

Query: 301 GGAVINQIRQETKAAIKVDSSTEGDDSLINISSKEFFEDSYSPTLEAALRLQPRCSEKVE 360
           GGAVINQIRQETKAAIKVDSSTEGDDSLINISSKEFFEDSYSPTLEAALRLQPRCSEKVE
Sbjct: 301 GGAVINQIRQETKAAIKVDSSTEGDDSLINISSKEFFEDSYSPTLEAALRLQPRCSEKVE 360

Query: 361 RDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMV 420
           RDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMV
Sbjct: 361 RDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMV 420

Query: 421 QISGDLDVAKEALVHIVTRLRANLFDREGALSAMLPVLPYLPLSADGSDSLNYDGRDSKR 480
           QISGDLDVAKEALVHIVTRLRANLFDREGALSAMLPVLPYLPLSADGSDSLNYDGRDSKR
Sbjct: 421 QISGDLDVAKEALVHIVTRLRANLFDREGALSAMLPVLPYLPLSADGSDSLNYDGRDSKR 480

Query: 481 HGRGHSYSSGYGGFSDLAAGDGYGSYSGSQIGGGGGNAYGAYGNFSMGRSGSSGVSGHGS 540
           HGRGHSYSSGYGGFSDLAAGDGYGSYSGSQIGGGGGNAYGAYGNFSMGRSGSSGVSGHGS
Sbjct: 481 HGRGHSYSSGYGGFSDLAAGDGYGSYSGSQIGGGGGNAYGAYGNFSMGRSGSSGVSGHGS 540

Query: 541 EPRRRNYS 549
           EPRRRNYS
Sbjct: 541 EPRRRNYS 548

[Close]

BLAST of CmaCh04G027710.1 vs. NCBI nr
Match: XP_023544404.1 (KH domain-containing protein HEN4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1055.4 bits (2728), Expect = 1.6e-304
Identity = 544/548 (99.27%), Postives = 545/548 (99.45%), Query Frame = 0


Query: 1   MAGQRNSYGKRNHSQSDYAENGGNRRRSHGDDRDQFVIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSYGKRNHSQSDYAENGGNRRRSHGDDRDQFVIDPEDTVYRYLCPVKKIGSVIGR
Sbjct: 1   MAGQRNSYGKRNHSQSDYAENGGNRRRSHGDDRDQFVIDPEDTVYRYLCPVKKIGSVIGR 60

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGCDERVITIYSPSNEINSMEDSDYVSPAQEALFKVHD 120
           GGEIVKQLRIDTKSKIRIGETVPGCDERVITIYSPSNEINSMEDSDYVSPAQEALFKVHD
Sbjct: 61  GGEIVKQLRIDTKSKIRIGETVPGCDERVITIYSPSNEINSMEDSDYVSPAQEALFKVHD 120

Query: 121 RVVADDLNEEESEGGGPHVTARILVPSDQIGCIIGKGGQIVQNIRTETGALVRILKDDHL 180
           RVVADDLNEEESEGGG HVTARILVPSDQIGCIIGKGGQIVQNIRTETGALVRILKDDHL
Sbjct: 121 RVVADDLNEEESEGGGHHVTARILVPSDQIGCIIGKGGQIVQNIRTETGALVRILKDDHL 180

Query: 181 PRCALNSDELVQVSGEPSIVKKALYQIASRLHDNPSRSQHLLASAIPGVYASGGSILAPT 240
           PRCALNSDELVQVSGEPSIVKKALYQIASRLHDNPSRSQHLLASAIPGVYASGGSILAPT
Sbjct: 181 PRCALNSDELVQVSGEPSIVKKALYQIASRLHDNPSRSQHLLASAIPGVYASGGSILAPT 240

Query: 241 HGAPIMGLAPLVGPYGGYKGDSGNWSRSLYSAPREELSSAKEFSLRLVCPSENIGGVIGK 300
           HGAPIMGLAPLVGPYGGYKGD GNWSRSLYSAPR+ELSSAKEFSLRLVCPSENIGGVIGK
Sbjct: 241 HGAPIMGLAPLVGPYGGYKGDGGNWSRSLYSAPRDELSSAKEFSLRLVCPSENIGGVIGK 300

Query: 301 GGAVINQIRQETKAAIKVDSSTEGDDSLINISSKEFFEDSYSPTLEAALRLQPRCSEKVE 360
           GGAVINQIRQETKAAIKVDSSTEGDDSLINISSKEFFEDSYSPTLEAALRLQPRCSEKVE
Sbjct: 301 GGAVINQIRQETKAAIKVDSSTEGDDSLINISSKEFFEDSYSPTLEAALRLQPRCSEKVE 360

Query: 361 RDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMV 420
           RDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMV
Sbjct: 361 RDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMV 420

Query: 421 QISGDLDVAKEALVHIVTRLRANLFDREGALSAMLPVLPYLPLSADGSDSLNYDGRDSKR 480
           QISGDLDVAKEALVHIVTRLRANLFDREGALSAMLPVLPYLPLSADGSDSLNYDGRDSKR
Sbjct: 421 QISGDLDVAKEALVHIVTRLRANLFDREGALSAMLPVLPYLPLSADGSDSLNYDGRDSKR 480

Query: 481 HGRGHSYSSGYGGFSDLAAGDGYGSYSGSQIGGGGGNAYGAYGNFSMGRSGSSGVSGHGS 540
           HGRGHSYSSGYGGF DLAAGDGYGSYSGSQIGGGGGNAYGAYGNFSMGRSGSSGVSGHGS
Sbjct: 481 HGRGHSYSSGYGGFGDLAAGDGYGSYSGSQIGGGGGNAYGAYGNFSMGRSGSSGVSGHGS 540

Query: 541 EPRRRNYS 549
           EPRRRNYS
Sbjct: 541 EPRRRNYS 548

[Close]

BLAST of CmaCh04G027710.1 vs. NCBI nr
Match: XP_022958668.1 (KH domain-containing protein HEN4-like [Cucurbita moschata])

HSP 1 Score: 1052.4 bits (2720), Expect = 1.4e-303
Identity = 545/550 (99.09%), Postives = 547/550 (99.45%), Query Frame = 0


Query: 1   MAGQRNSYGKRNHSQSDYAENGGNRRRSHGDDRDQFVIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSYGKRNHSQSDYAENGGNRRRSHGDDRDQFVIDPEDTVYRYLCPVKKIGSVIGR
Sbjct: 1   MAGQRNSYGKRNHSQSDYAENGGNRRRSHGDDRDQFVIDPEDTVYRYLCPVKKIGSVIGR 60

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGCDERVITIYSPSNEINSMEDSDYVSPAQEALFKVHD 120
           GGEIVKQLRIDTKSKIRIGETVPGCDERVITIYSPSNEINSMEDSDYVSPAQEALFKVHD
Sbjct: 61  GGEIVKQLRIDTKSKIRIGETVPGCDERVITIYSPSNEINSMEDSDYVSPAQEALFKVHD 120

Query: 121 RVVADDLNEEESEGGGPHVTARILVPSDQIGCIIGKGGQIVQNIRTETGALVRILKDDHL 180
           RVVADDLNEEESEGGG HVTARILVPSDQIGCIIGKGGQIVQNIRTETGALVRILKDDHL
Sbjct: 121 RVVADDLNEEESEGGGHHVTARILVPSDQIGCIIGKGGQIVQNIRTETGALVRILKDDHL 180

Query: 181 PRCALNSDELVQVSGEPSIVKKALYQIASRLHDNPSRSQHLLASAIPGVYASGGSILAPT 240
           PRCALNSDELVQVSGEPSIVKKALYQIASRLHDNPSRSQHLLASAIPGVYASGGSILAPT
Sbjct: 181 PRCALNSDELVQVSGEPSIVKKALYQIASRLHDNPSRSQHLLASAIPGVYASGGSILAPT 240

Query: 241 HGAPIMGLAPLVGPYGGYKGDSGNWSRSLYSAPREELSSAKEFSLRLVCPSENIGGVIGK 300
           HGAPIMGLAPLVGPYGGYKGDSGNWSRSLYSAPREELSSAKEFSLRLVCPSENIGGVIGK
Sbjct: 241 HGAPIMGLAPLVGPYGGYKGDSGNWSRSLYSAPREELSSAKEFSLRLVCPSENIGGVIGK 300

Query: 301 GGAVINQIRQETKAAIKVDSSTEGDDSLINISSKEFFEDSYSPTLEAALRLQPRCSEKVE 360
           GGAVINQIRQETKAAIKVDSSTEGDDSLINISSKEFFEDSYSPTLEAALRLQPRCSEKVE
Sbjct: 301 GGAVINQIRQETKAAIKVDSSTEGDDSLINISSKEFFEDSYSPTLEAALRLQPRCSEKVE 360

Query: 361 RDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMV 420
           RDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMV
Sbjct: 361 RDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMV 420

Query: 421 QISGDLDVAKEALVHIVTRLRANLFDREGALSAMLPVLPYLPLSADGSDSLNYDGRDSKR 480
           QISGDLDVAKEALVHIVTRLRANLFDREGALSAMLPVLPYLPLSADGSDSLNYDGRDSKR
Sbjct: 421 QISGDLDVAKEALVHIVTRLRANLFDREGALSAMLPVLPYLPLSADGSDSLNYDGRDSKR 480

Query: 481 HGRGHSYSSGYGGFSDLAAGDGYGSYSGSQI--GGGGGNAYGAYGNFSMGRSGSSGVSGH 540
           HGRGHSYSSGYGGF+DLAAGDGYGSYSGSQI  GGGGGNAYGAYGNFSMGRSGSSGVSGH
Sbjct: 481 HGRGHSYSSGYGGFTDLAAGDGYGSYSGSQIGGGGGGGNAYGAYGNFSMGRSGSSGVSGH 540

Query: 541 GSEPRRRNYS 549
           G+EPRRRNYS
Sbjct: 541 GNEPRRRNYS 550

[Close]

BLAST of CmaCh04G027710.1 vs. NCBI nr
Match: XP_022133717.1 (KH domain-containing protein HEN4 [Momordica charantia])

HSP 1 Score: 980.3 bits (2533), Expect = 6.7e-282
Identity = 505/550 (91.82%), Postives = 532/550 (96.73%), Query Frame = 0


Query: 1   MAGQRNSYGKRNHSQSDYAENGGNRRRSHGDDRDQFVIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSYGKRNHSQSDYAENGGN+RR+HG+DRDQFVIDPEDTVYRYLCPVKKIGSVIGR
Sbjct: 1   MAGQRNSYGKRNHSQSDYAENGGNKRRTHGEDRDQFVIDPEDTVYRYLCPVKKIGSVIGR 60

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGCDERVITIYSPSNEINSMEDS-DYVSPAQEALFKVH 120
           GGEIVKQLRIDTKSKIRIGETVPG DERVITIYS SNEINS+E+S DYV PAQEALFK+H
Sbjct: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEINSLEESDDYVCPAQEALFKIH 120

Query: 121 DRVVADDLNEEESEGGGPHVTARILVPSDQIGCIIGKGGQIVQNIRTETGALVRILKDDH 180
           DRVVADDLN+EES+GGG  VTAR+LVPSDQIGCIIGKGGQIVQNIRTETGA +RILKDDH
Sbjct: 121 DRVVADDLNDEESDGGGHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGAQIRILKDDH 180

Query: 181 LPRCALNSDELVQVSGEPSIVKKALYQIASRLHDNPSRSQHLLASAIPGVYASGGSILAP 240
           LPRCAL+SDELVQ+SGE  IV+KALY+IASRLHDNPSRSQHLLASA+P VY+SGGS++ P
Sbjct: 181 LPRCALSSDELVQISGEALIVRKALYRIASRLHDNPSRSQHLLASAMPNVYSSGGSLVTP 240

Query: 241 THGAPIMGLAPLVGPYGGYKGDSGNWSRSLYSAPREELSSAKEFSLRLVCPSENIGGVIG 300
           THG PIMGLAPLVGPYGGYKGDSGNWSRSLYSAPREELSS+KEFSLRL+CP+ENIGGVIG
Sbjct: 241 THGGPIMGLAPLVGPYGGYKGDSGNWSRSLYSAPREELSSSKEFSLRLICPTENIGGVIG 300

Query: 301 KGGAVINQIRQETKAAIKVDSS-TEGDDSLINISSKEFFEDSYSPTLEAALRLQPRCSEK 360
           KGGA+INQIRQETKAAIKVDSS TEGDD LINISSKEFFEDSYSPTLEAALRLQPRCSEK
Sbjct: 301 KGGAIINQIRQETKAAIKVDSSATEGDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEK 360

Query: 361 VERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDE 420
           VERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDE
Sbjct: 361 VERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDE 420

Query: 421 MVQISGDLDVAKEALVHIVTRLRANLFDREGALSAMLPVLPYLPLSADGSDSLNYDGRDS 480
           MVQISGDLDVAKEALVH+VTRLRANLFDREGALSAMLPVLPYLPLSADGSDSL+YDGRD 
Sbjct: 421 MVQISGDLDVAKEALVHVVTRLRANLFDREGALSAMLPVLPYLPLSADGSDSLSYDGRDG 480

Query: 481 KRHGRGHSYSSGYGGFSDLAAGDGYGSYSGSQIGGGGGNAYGAYGNFSMGRSGSSGVSGH 540
           KRHGRGHSYSSGYGGF+DLAAGDGYGSYSGSQI GGGG+AYGAYG+FSMGRSGSSGVSGH
Sbjct: 481 KRHGRGHSYSSGYGGFNDLAAGDGYGSYSGSQI-GGGGSAYGAYGSFSMGRSGSSGVSGH 540

Query: 541 GSEPRRRNYS 549
           GS  RRRNYS
Sbjct: 541 GSVSRRRNYS 549

[Close]

BLAST of CmaCh04G027710.1 vs. NCBI nr
Match: XP_038889775.1 (KH domain-containing protein HEN4 [Benincasa hispida])

HSP 1 Score: 974.5 bits (2518), Expect = 3.7e-280
Identity = 507/552 (91.85%), Postives = 533/552 (96.56%), Query Frame = 0


Query: 1   MAGQRNSYGKRNHSQSDYAENGGNRRRSHGDDRDQFVIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSYGKRNHSQSDY+ENGGN+RRSHG+DRDQFVID EDTVYRYLCPVKKIGSVIGR
Sbjct: 1   MAGQRNSYGKRNHSQSDYSENGGNKRRSHGEDRDQFVIDSEDTVYRYLCPVKKIGSVIGR 60

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGCDERVITIYSPSNEINSMED-SDYVSPAQEALFKVH 120
           GGEIVKQLRIDTKSKIRIGETVPG DERVITIYS SNEINS+E+ SDYVSPAQEALFK+H
Sbjct: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSVSNEINSLEESSDYVSPAQEALFKIH 120

Query: 121 DRVVADDLNEEESEGGGPHVTARILVPSDQIGCIIGKGGQIVQNIRTETGALVRILKDDH 180
           DRVVADDL +E+SEGGG  VTAR+LVPSDQIGCIIGKGGQIVQNIRTETGA VRILKDDH
Sbjct: 121 DRVVADDLMDEDSEGGGHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGAQVRILKDDH 180

Query: 181 LPRCALNSDELVQVSGEPSIVKKALYQIASRLHDNPSRSQHLLASAIPGVYASGGSILAP 240
           LPRCAL+SDELVQ+SGEP IVKKALYQIASRLHDNPSRSQHLLASAIPGVY+SGGS++AP
Sbjct: 181 LPRCALSSDELVQISGEPLIVKKALYQIASRLHDNPSRSQHLLASAIPGVYSSGGSLMAP 240

Query: 241 THGAPIMGLAPLVGPYGGYKGDSGNWSRSLYSAPREELSSAKEFSLRLVCPSENIGGVIG 300
           THGAPIMGLAPLV PYGGYKGDSGNWSRSLYSAPRE+LSS KEFSLRL+CP+ENIGGVIG
Sbjct: 241 THGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREDLSS-KEFSLRLICPTENIGGVIG 300

Query: 301 KGGAVINQIRQETKAAIKVDSS-TEGDDSLINISSKEFFEDSYSPTLEAALRLQPRCSEK 360
           KGGA+INQIRQETKAAIKVDSS TEGDD LINISSKEFFEDSYSPTLEAALRLQPRCSEK
Sbjct: 301 KGGAIINQIRQETKAAIKVDSSATEGDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEK 360

Query: 361 VERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDE 420
           VERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDE
Sbjct: 361 VERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDE 420

Query: 421 MVQISGDLDVAKEALVHIVTRLRANLFDREGALSAMLPVLPYLPLSADGSDSLNYDGRDS 480
           MVQISGD+DVAKEALVHIVTRLRANLFDREGALSA+LPVLPYLPLSADGSDSL+YDGR+ 
Sbjct: 421 MVQISGDIDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREG 480

Query: 481 KRHGRGHSYSSGYGGFSDLAAGDGYGSYSGSQI--GGGGGNAYGAYGNFSMGRSGSSGVS 540
           KRHGRGHSYSSGYGGFSDLA GDGYGSYSGSQI  GGGGG+AYG+YG+FS+GRSGSSGVS
Sbjct: 481 KRHGRGHSYSSGYGGFSDLAGGDGYGSYSGSQIGGGGGGGSAYGSYGSFSVGRSGSSGVS 540

Query: 541 GHGSEPRRRNYS 549
           GHGS  RRRNYS
Sbjct: 541 GHGSVSRRRNYS 551

[Close]

BLAST of CmaCh04G027710.1 vs. TAIR 10
Match: AT5G15270.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 679.5 bits (1752), Expect = 2.3e-195
Identity = 359/545 (65.87%), Postives = 442/545 (81.10%), Query Frame = 0


Query: 5   RNSYGKRNHSQSDYAENGGNRRRSHGDDRDQFVIDPEDTVYRYLCPVKKIGSVIGRGGEI 64
           R+S+ KR+  QSDY +NGG++RR  GDDRD  VID +DTV+RYLCPVKKIGSVIGRGG+I
Sbjct: 12  RDSHRKRSRPQSDYDDNGGSKRRYRGDDRDSLVIDRDDTVFRYLCPVKKIGSVIGRGGDI 71

Query: 65  VKQLRIDTKSKIRIGETVPGCDERVITIYSPSNEINSMEDSDYV-SPAQEALFKVHDRVV 124
           VKQLR DT+SKIRIGE +PGCDERVITIYSPS+E N+  D + V SPAQ+ALF++HDRVV
Sbjct: 72  VKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGDGEKVLSPAQDALFRIHDRVV 131

Query: 125 ADDLNEEESEGGGPHVTARILVPSDQIGCIIGKGGQIVQNIRTETGALVRILKDDHLPRC 184
           ADD   E+S  G   VTA++LVPSDQIGCI+G+GGQIVQNIR+ETGA +RI+KD ++P C
Sbjct: 132 ADDARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIVKDRNMPLC 191

Query: 185 ALNSDELVQVSGEPSIVKKALYQIASRLHDNPSRSQHLLASAIPGVYASGGSILAPTHGA 244
           ALNSDEL+Q+SGE  IVKKAL QIASRLH+NPSRSQ+LL+S+  G Y + GS+++   G 
Sbjct: 192 ALNSDELIQISGEVLIVKKALLQIASRLHENPSRSQNLLSSS--GGYPA-GSLMSHAGGP 251

Query: 245 PIMGLAPLVGPYGGYKGDSGNWSRSLYSAPREELSSAKEFSLRLVCPSENIGGVIGKGGA 304
            ++GLAPL+G YG    D+G+WSR LY  PR +   A EF +RLV P ENI  VIGKGGA
Sbjct: 252 RLVGLAPLMGSYG---RDAGDWSRPLYQPPRND-PPATEFFIRLVSPVENIASVIGKGGA 311

Query: 305 VINQIRQETKAAIKVDSS-TEGDDSLINISSKEFFEDSYSPTLEAALRLQPRCSEKVERD 364
           +INQ+RQET+A IKVDSS TEG+D LI IS++E FED+YSPT+EA +RLQP+CS+KVERD
Sbjct: 312 LINQLRQETRATIKVDSSRTEGNDCLITISAREVFEDAYSPTIEAVMRLQPKCSDKVERD 371

Query: 365 SGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMVQI 424
           SG++SFTTRLLVP+SRIGC++GKGGAIITE+RR+TKANIRIL KENLPKVA +DDEMVQI
Sbjct: 372 SGLVSFTTRLLVPSSRIGCILGKGGAIITEMRRMTKANIRILGKENLPKVASDDDEMVQI 431

Query: 425 SGDLDVAKEALVHIVTRLRANLFDREGALSAMLPVLPYLPLSADGSDSLNYDGRDSKRHG 484
           SG+LDVAKEAL+ I +RLRAN+FDREGA+SA++PVLPY+P++ D  D  +YD RDS+R  
Sbjct: 432 SGELDVAKEALIQITSRLRANVFDREGAVSALMPVLPYVPVAPDAGDRFDYDSRDSRRLE 491

Query: 485 RGHSYSSGYGGFSDLAAGDGYGSYSGSQIGGGGGNAYGAYGNFSMGRSGSSGVSGHGSEP 544
           RG+ Y  GYG  S   + +GY  Y G+ +GG     YG YG ++ GRS SSG+S H S  
Sbjct: 492 RGNPYPGGYG--SSGVSAEGYSPY-GAPVGGSSSTPYGVYGGYASGRSSSSGLSSHSSTY 546

Query: 545 RRRNY 548
           RRRNY
Sbjct: 552 RRRNY 546

[Close]

BLAST of CmaCh04G027710.1 vs. TAIR 10
Match: AT5G15270.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 679.5 bits (1752), Expect = 2.3e-195
Identity = 359/545 (65.87%), Postives = 442/545 (81.10%), Query Frame = 0


Query: 5   RNSYGKRNHSQSDYAENGGNRRRSHGDDRDQFVIDPEDTVYRYLCPVKKIGSVIGRGGEI 64
           R+S+ KR+  QSDY +NGG++RR  GDDRD  VID +DTV+RYLCPVKKIGSVIGRGG+I
Sbjct: 12  RDSHRKRSRPQSDYDDNGGSKRRYRGDDRDSLVIDRDDTVFRYLCPVKKIGSVIGRGGDI 71

Query: 65  VKQLRIDTKSKIRIGETVPGCDERVITIYSPSNEINSMEDSDYV-SPAQEALFKVHDRVV 124
           VKQLR DT+SKIRIGE +PGCDERVITIYSPS+E N+  D + V SPAQ+ALF++HDRVV
Sbjct: 72  VKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGDGEKVLSPAQDALFRIHDRVV 131

Query: 125 ADDLNEEESEGGGPHVTARILVPSDQIGCIIGKGGQIVQNIRTETGALVRILKDDHLPRC 184
           ADD   E+S  G   VTA++LVPSDQIGCI+G+GGQIVQNIR+ETGA +RI+KD ++P C
Sbjct: 132 ADDARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIVKDRNMPLC 191

Query: 185 ALNSDELVQVSGEPSIVKKALYQIASRLHDNPSRSQHLLASAIPGVYASGGSILAPTHGA 244
           ALNSDEL+Q+SGE  IVKKAL QIASRLH+NPSRSQ+LL+S+  G Y + GS+++   G 
Sbjct: 192 ALNSDELIQISGEVLIVKKALLQIASRLHENPSRSQNLLSSS--GGYPA-GSLMSHAGGP 251

Query: 245 PIMGLAPLVGPYGGYKGDSGNWSRSLYSAPREELSSAKEFSLRLVCPSENIGGVIGKGGA 304
            ++GLAPL+G YG    D+G+WSR LY  PR +   A EF +RLV P ENI  VIGKGGA
Sbjct: 252 RLVGLAPLMGSYG---RDAGDWSRPLYQPPRND-PPATEFFIRLVSPVENIASVIGKGGA 311

Query: 305 VINQIRQETKAAIKVDSS-TEGDDSLINISSKEFFEDSYSPTLEAALRLQPRCSEKVERD 364
           +INQ+RQET+A IKVDSS TEG+D LI IS++E FED+YSPT+EA +RLQP+CS+KVERD
Sbjct: 312 LINQLRQETRATIKVDSSRTEGNDCLITISAREVFEDAYSPTIEAVMRLQPKCSDKVERD 371

Query: 365 SGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMVQI 424
           SG++SFTTRLLVP+SRIGC++GKGGAIITE+RR+TKANIRIL KENLPKVA +DDEMVQI
Sbjct: 372 SGLVSFTTRLLVPSSRIGCILGKGGAIITEMRRMTKANIRILGKENLPKVASDDDEMVQI 431

Query: 425 SGDLDVAKEALVHIVTRLRANLFDREGALSAMLPVLPYLPLSADGSDSLNYDGRDSKRHG 484
           SG+LDVAKEAL+ I +RLRAN+FDREGA+SA++PVLPY+P++ D  D  +YD RDS+R  
Sbjct: 432 SGELDVAKEALIQITSRLRANVFDREGAVSALMPVLPYVPVAPDAGDRFDYDSRDSRRLE 491

Query: 485 RGHSYSSGYGGFSDLAAGDGYGSYSGSQIGGGGGNAYGAYGNFSMGRSGSSGVSGHGSEP 544
           RG+ Y  GYG  S   + +GY  Y G+ +GG     YG YG ++ GRS SSG+S H S  
Sbjct: 492 RGNPYPGGYG--SSGVSAEGYSPY-GAPVGGSSSTPYGVYGGYASGRSSSSGLSSHSSTY 546

Query: 545 RRRNY 548
           RRRNY
Sbjct: 552 RRRNY 546

[Close]

BLAST of CmaCh04G027710.1 vs. TAIR 10
Match: AT1G14170.3 (RNA-binding KH domain-containing protein )

HSP 1 Score: 463.8 bits (1192), Expect = 2.0e-130
Identity = 253/482 (52.49%), Postives = 339/482 (70.33%), Query Frame = 0


Query: 5   RNSYGKRNHSQSDYAENGGNRRRSHGDDRDQFVIDPEDTVYRYLCPVKKIGSVIGRGGEI 64
           RN +GKR++ QS++  NGG++RR+  D+ DQ VI  EDTVYRYLCPVKK GS+IG+GGEI
Sbjct: 6   RNIHGKRSNLQSEFTGNGGSKRRNLHDETDQNVIASEDTVYRYLCPVKKTGSIIGKGGEI 65

Query: 65  VKQLRIDTKSKIRIGETVPGCDERVITIYSPSNEINSM-EDSDYVSPAQEALFKVHDRVV 124
            KQ+R +TKS +RI E +PGC+ERV+T+YS + E+N   +D + V PA +ALFKVHD VV
Sbjct: 66  AKQIRSETKSNMRINEALPGCEERVVTMYSTNEELNHFGDDGELVCPALDALFKVHDMVV 125

Query: 125 A-----DDLNEEESEGGGPHVTARILVPSDQIGCIIGKGGQIVQNIRTETGALVRILKDD 184
           A     D  +++   G    VT R+LVPSDQIGC+IGKGGQ++QN+R +T A +R++K D
Sbjct: 126 ADADQDDGTDDDNDLGEKQTVTVRMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVIK-D 185

Query: 185 HLPRCA--LNSDELVQVSGEPSIVKKALYQIASRLHDNPSRSQHLLASAIPGVYASGGSI 244
           HLP CA  L+ DEL+ + GEP +V++ALYQ+AS LHDNPSR QHLL S      +S  S+
Sbjct: 186 HLPACALTLSHDELLLIIGEPLVVREALYQVASLLHDNPSRFQHLLLS------SSSSSM 245

Query: 245 LAPTHGAPIMGLAPLVGPYGGYKGDSGNWSRSLYSAPREELSSAKEFSLRLVCPSENIGG 304
             P  GA +M  A L   +  Y             A R +++ A+EF +  +CP+EN+GG
Sbjct: 246 HQP--GAMLMS-AALTSSHRNY-------------AVRRDIADAREFCVCFICPAENVGG 305

Query: 305 VIGKGGAVINQIRQETKAAIKVDSS-TEGDDSLINISSKEFFEDSYSPTLEAALRLQPRC 364
           VIGKGG  INQIRQET A I+V++S T+ DD +I ISSKEF+ED  SP + AA+RLQ RC
Sbjct: 306 VIGKGGGFINQIRQETGATIRVNTSETDDDDCIIFISSKEFYEDQ-SPAVNAAIRLQQRC 365

Query: 365 SEKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALE 424
           SEKV +D+  ++ +TRLLV +S+IGCLIGKGGA+I+E+R +T+ANIRIL KE++PK+A E
Sbjct: 366 SEKVGKDANDLAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIARE 425

Query: 425 DDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAMLPVLPYLPLSADGSDSLNYDG 478
           D+EMVQI+G  D A +AL  ++ RLRAN FD +  L  +    PY+P   + S    Y  
Sbjct: 426 DEEMVQITGSPDAAMKALTQVILRLRANSFDMDHGLVLLPTSFPYIPQVTESSSKSKYAK 463

[Close]

BLAST of CmaCh04G027710.1 vs. TAIR 10
Match: AT1G14170.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 441.8 bits (1135), Expect = 8.0e-124
Identity = 240/453 (52.98%), Postives = 317/453 (69.98%), Query Frame = 0


Query: 34  DQFVIDPEDTVYRYLCPVKKIGSVIGRGGEIVKQLRIDTKSKIRIGETVPGCDERVITIY 93
           DQ VI  EDTVYRYLCPVKK GS+IG+GGEI KQ+R +TKS +RI E +PGC+ERV+T+Y
Sbjct: 10  DQNVIASEDTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMY 69

Query: 94  SPSNEINSM-EDSDYVSPAQEALFKVHDRVVA-----DDLNEEESEGGGPHVTARILVPS 153
           S + E+N   +D + V PA +ALFKVHD VVA     D  +++   G    VT R+LVPS
Sbjct: 70  STNEELNHFGDDGELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQTVTVRMLVPS 129

Query: 154 DQIGCIIGKGGQIVQNIRTETGALVRILKDDHLPRCA--LNSDELVQVSGEPSIVKKALY 213
           DQIGC+IGKGGQ++QN+R +T A +R++K DHLP CA  L+ DEL+ + GEP +V++ALY
Sbjct: 130 DQIGCVIGKGGQVIQNLRNDTNAQIRVIK-DHLPACALTLSHDELLLIIGEPLVVREALY 189

Query: 214 QIASRLHDNPSRSQHLLASAIPGVYASGGSILAPTHGAPIMGLAPLVGPYGGYKGDSGNW 273
           Q+AS LHDNPSR QHLL S      +S  S+  P  GA +M  A L   +  Y       
Sbjct: 190 QVASLLHDNPSRFQHLLLS------SSSSSMHQP--GAMLMS-AALTSSHRNY------- 249

Query: 274 SRSLYSAPREELSSAKEFSLRLVCPSENIGGVIGKGGAVINQIRQETKAAIKVDSS-TEG 333
                 A R +++ A+EF +  +CP+EN+GGVIGKGG  INQIRQET A I+V++S T+ 
Sbjct: 250 ------AVRRDIADAREFCVCFICPAENVGGVIGKGGGFINQIRQETGATIRVNTSETDD 309

Query: 334 DDSLINISSKEFFEDSYSPTLEAALRLQPRCSEKVERDSGIISFTTRLLVPTSRIGCLIG 393
           DD +I ISSKEF+ED  SP + AA+RLQ RCSEKV +D+  ++ +TRLLV +S+IGCLIG
Sbjct: 310 DDCIIFISSKEFYEDQ-SPAVNAAIRLQQRCSEKVGKDANDLAISTRLLVSSSQIGCLIG 369

Query: 394 KGGAIITELRRLTKANIRILSKENLPKVALEDDEMVQISGDLDVAKEALVHIVTRLRANL 453
           KGGA+I+E+R +T+ANIRIL KE++PK+A ED+EMVQI+G  D A +AL  ++ RLRAN 
Sbjct: 370 KGGAVISEMRSVTRANIRILQKEDVPKIAREDEEMVQITGSPDAAMKALTQVILRLRANS 429

Query: 454 FDREGALSAMLPVLPYLPLSADGSDSLNYDGRD 478
           FD +  L  +    PY+P   + S    Y  RD
Sbjct: 430 FDMDHGLVLLPTSFPYIPQVTESSSKSKYAKRD 438

[Close]

BLAST of CmaCh04G027710.1 vs. TAIR 10
Match: AT1G14170.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 434.9 bits (1117), Expect = 9.7e-122
Identity = 235/445 (52.81%), Postives = 312/445 (70.11%), Query Frame = 0


Query: 42  DTVYRYLCPVKKIGSVIGRGGEIVKQLRIDTKSKIRIGETVPGCDERVITIYSPSNEINS 101
           DTVYRYLCPVKK GS+IG+GGEI KQ+R +TKS +RI E +PGC+ERV+T+YS + E+N 
Sbjct: 10  DTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEELNH 69

Query: 102 M-EDSDYVSPAQEALFKVHDRVVA-----DDLNEEESEGGGPHVTARILVPSDQIGCIIG 161
             +D + V PA +ALFKVHD VVA     D  +++   G    VT R+LVPSDQIGC+IG
Sbjct: 70  FGDDGELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQTVTVRMLVPSDQIGCVIG 129

Query: 162 KGGQIVQNIRTETGALVRILKDDHLPRCA--LNSDELVQVSGEPSIVKKALYQIASRLHD 221
           KGGQ++QN+R +T A +R++K DHLP CA  L+ DEL+ + GEP +V++ALYQ+AS LHD
Sbjct: 130 KGGQVIQNLRNDTNAQIRVIK-DHLPACALTLSHDELLLIIGEPLVVREALYQVASLLHD 189

Query: 222 NPSRSQHLLASAIPGVYASGGSILAPTHGAPIMGLAPLVGPYGGYKGDSGNWSRSLYSAP 281
           NPSR QHLL S      +S  S+  P  GA +M  A L   +  Y             A 
Sbjct: 190 NPSRFQHLLLS------SSSSSMHQP--GAMLMS-AALTSSHRNY-------------AV 249

Query: 282 REELSSAKEFSLRLVCPSENIGGVIGKGGAVINQIRQETKAAIKVDSS-TEGDDSLINIS 341
           R +++ A+EF +  +CP+EN+GGVIGKGG  INQIRQET A I+V++S T+ DD +I IS
Sbjct: 250 RRDIADAREFCVCFICPAENVGGVIGKGGGFINQIRQETGATIRVNTSETDDDDCIIFIS 309

Query: 342 SKEFFEDSYSPTLEAALRLQPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITE 401
           SKEF+ED  SP + AA+RLQ RCSEKV +D+  ++ +TRLLV +S+IGCLIGKGGA+I+E
Sbjct: 310 SKEFYEDQ-SPAVNAAIRLQQRCSEKVGKDANDLAISTRLLVSSSQIGCLIGKGGAVISE 369

Query: 402 LRRLTKANIRILSKENLPKVALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALS 461
           +R +T+ANIRIL KE++PK+A ED+EMVQI+G  D A +AL  ++ RLRAN FD +  L 
Sbjct: 370 MRSVTRANIRILQKEDVPKIAREDEEMVQITGSPDAAMKALTQVILRLRANSFDMDHGLV 429

Query: 462 AMLPVLPYLPLSADGSDSLNYDGRD 478
            +    PY+P   + S    Y  RD
Sbjct: 430 LLPTSFPYIPQVTESSSKSKYAKRD 430

The following BLAST results are available for this feature:

BLAST of CmaCh04G027710.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W4B1	6.5e-54	32.91	RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana OX=3702 GN...	[more]
P58223	2.4e-48	30.62	KH domain-containing protein At4g18375 OS=Arabidopsis thaliana OX=3702 GN=At4g18...	[more]
F4KDN0	5.5e-37	25.84	KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 S...	[more]
Q9SR13	7.5e-26	38.15	Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV...	[more]
Q61990	1.8e-19	27.63	Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1	[more]

BLAST of CmaCh04G027710.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JP17	3.8e-307	100.00	KH domain-containing protein HEN4-like OS=Cucurbita maxima OX=3661 GN=LOC1114870...	[more]
A0A6J1H3Q6	6.7e-304	99.09	KH domain-containing protein HEN4-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1BXI3	3.2e-282	91.82	KH domain-containing protein HEN4 OS=Momordica charantia OX=3673 GN=LOC111006233...	[more]
A0A0A0KVM1	2.0e-279	90.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636640 PE=4 SV=1	[more]
A0A1S3C9E7	1.3e-278	90.48	KH domain-containing protein At4g18375 isoform X1 OS=Cucumis melo OX=3656 GN=LOC...	[more]

BLAST of CmaCh04G027710.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022990045.1	7.8e-307	100.00	KH domain-containing protein HEN4-like [Cucurbita maxima]	[more]
XP_023544404.1	1.6e-304	99.27	KH domain-containing protein HEN4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022958668.1	1.4e-303	99.09	KH domain-containing protein HEN4-like [Cucurbita moschata]	[more]
XP_022133717.1	6.7e-282	91.82	KH domain-containing protein HEN4 [Momordica charantia]	[more]
XP_038889775.1	3.7e-280	91.85	KH domain-containing protein HEN4 [Benincasa hispida]	[more]

BLAST of CmaCh04G027710.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15270.2	2.3e-195	65.87	RNA-binding KH domain-containing protein	[more]
AT5G15270.1	2.3e-195	65.87	RNA-binding KH domain-containing protein	[more]
AT1G14170.3	2.0e-130	52.49	RNA-binding KH domain-containing protein	[more]
AT1G14170.1	8.0e-124	52.98	RNA-binding KH domain-containing protein	[more]
AT1G14170.2	9.7e-122	52.81	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 137..212 e-value: 1.0E-14 score: 64.9 coord: 281..353 e-value: 4.1E-5 score: 33.0 coord: 41..123 e-value: 2.2E-6 score: 37.2 coord: 366..441 e-value: 9.4E-12 score: 55.0
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 285..333 e-value: 3.4E-10 score: 39.6 coord: 45..99 e-value: 2.7E-9 score: 36.7 coord: 369..436 e-value: 7.4E-14 score: 51.3 coord: 140..208 e-value: 7.4E-15 score: 54.5
None	No IPR available	GENE3D	3.30.310.210		coord: 41..219 e-value: 4.0E-36 score: 126.2 coord: 282..443 e-value: 1.4E-31 score: 111.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	PANTHER	PTHR10288:SF274	PROTEIN BTR1-LIKE	coord: 9..498
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 9..498
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 138..207 score: 18.113876
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 42..115 score: 12.726333
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 282..352 score: 13.732566
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 367..436 score: 15.933702
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 369..437 e-value: 1.79202E-18 score: 77.5167
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 284..334 e-value: 3.00894E-13 score: 62.8791
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 140..208 e-value: 1.82424E-20 score: 83.2947
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 44..119 e-value: 1.82659E-17 score: 74.8203
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 135..215
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 38..98
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 367..441
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 270..332

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh04G027710	CmaCh04G027710	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh04G027710.1:exon:1964	CmaCh04G027710.1:exon:1964	exon
CmaCh04G027710.1:exon:1965	CmaCh04G027710.1:exon:1965	exon
CmaCh04G027710.1:exon:1966	CmaCh04G027710.1:exon:1966	exon
CmaCh04G027710.1:exon:1967	CmaCh04G027710.1:exon:1967	exon
CmaCh04G027710.1:exon:1968	CmaCh04G027710.1:exon:1968	exon
CmaCh04G027710.1:exon:1969	CmaCh04G027710.1:exon:1969	exon
CmaCh04G027710.1:exon:1970	CmaCh04G027710.1:exon:1970	exon
CmaCh04G027710.1:exon:1971	CmaCh04G027710.1:exon:1971	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh04G027710.1:cds	CmaCh04G027710.1:cds	CDS
CmaCh04G027710.1:cds	CmaCh04G027710.1:cds_2	CDS
CmaCh04G027710.1:cds	CmaCh04G027710.1:cds_3	CDS
CmaCh04G027710.1:cds	CmaCh04G027710.1:cds_4	CDS
CmaCh04G027710.1:cds	CmaCh04G027710.1:cds_5	CDS
CmaCh04G027710.1:cds	CmaCh04G027710.1:cds_6	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh04G027710.1:three_prime_utr	CmaCh04G027710.1:three_prime_utr	three_prime_UTR
CmaCh04G027710.1:three_prime_utr	CmaCh04G027710.1:three_prime_utr_2	three_prime_UTR
CmaCh04G027710.1:three_prime_utr	CmaCh04G027710.1:three_prime_utr_3	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh04G027710.1	CmaCh04G027710.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003729	mRNA binding