CmaCh04G015020.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G015020.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	50S ribosomal protein L15
Location	Cma_Chr04: 7635831 .. 7638367 (+)
Sequence length	1805
RNA-Seq Expression	CmaCh04G015020.1
Synteny	CmaCh04G015020.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGACTCCCAGTTTATCCATGGCTGCTCTTCTTTCCTTATCTTCAAGTTCCTTGACCAGAACAGCCATTGCTCTGCCTCATCCAACCACTTCCTTCAAGGTAATTTTAATTCCTGACGTTATCTCATTTCAATTTTCTGGCGCGTTGATTCTTTTATCATTCACGGAACTCTGATTCACATACATTTCCAGGGAAATGTGAAGATTCTGAACTCAAAGCAGTTCAGCTTTTCTTCACTCAAGCTCAAATTCAAGGTGGGAGATGGAAAACCATTGGTTGTTCGCAGCCAGGCCGCTGCGTCTTCCTTGTCTGCCTCTCCCGTCGAGAGTGTGCGGTTCCGTCTGGACAATCTTGGACCACAGCAAGGTTCGAGGAAGAAGGGCAAGAGAAAGGGGAGAGGTATATCGGCGGGACAGGGTGGTAGCTGTGGATTTGGAATGAGAGGACAGAAATCAAGGTCTGGGCCTGGTGTAAGAAAAGGATTCGAAGGTGGACAGATGCCTCTTTATCGGAGAATTCCCAAACTTAGAGGAATTGCAGGAGGTAATTTCTATCATTCTGCTACTTCCCTTTTGTATTTGAATTATACAACTCTAGAATCTGGCTGGTAGGCGTCCGCAATGGCTAATTGGGCTAGTAGTTGTGGTTGCTTCATTGAGGGAGAGTTCAAATTCTCCTTTCTATCTTATCTTGAATACTTCCATTCATTGGCCACACTCTTTACCCCTTAATTTCTTTTAACCTTCTTAGTACATGGTGGTTGCTGGAGAAATCGCGATTGCTAATAGTTGTTTGTATTTATTGTACTCGTATTTGTGTAGTTCCTTATTCCTTGATCTAGGACATTCGGCCTTGTTAGATTTTAGGAGAATAGGACAACGGAGAAAAGCAGTCACTCTATAATCTGATGTCCTTCTCCTGGTTCCTTTCAAGATGATATAATTCGTATTACATTTGTATGAACTCATGATATTAAGCCGAACAATTTCTTTTCCTTTGCAAGGTATGCATGCTGGGTTACCTAAATATGTGCCAGTGAATCTGAAAGACATTGAAGCGGCAGGATTTCAGGAAGGGGAAGAGGTCTCTTTGGAAAGTTTGAAGGAGAAGGGCTTGATCAACCCATCAGGAAGAGAAAGGAAACTCCCATTAAAGGTACTGATGTCACGAGTATCTACATTGTGAAGATTACACAAAGTGTATATCAAAATTGACATGCTGCTCTTTCCGACTCCAAGAAGTGAAACCAAAACTGAATGATTTAAACAGATGTTTCTTAACTCATCAAGATTCTGGTATCTGATTCTTACTGTCTTAACTTCGTCTTTCCTTCAGATTTTAGCTGATGGAGAGCTAAGTGTGAAGCTAAATATCAAAGCTCGGGCTTTTTCATCAGCAGCAAAAGAGAAGCTTGAAGCTGTTGGCTGTTCCCTTACTGTATTACCTGGGCGAAAGAAGTGGGTTAAGCCATCAGTGGCTAAGAACCTCGCACGGGCTGATGAATACTTCGCAAAGAAAAGGGCTGCAGCAGCTGCTGCAGAACAAGCTGACTGACTCCAAAATTGCGGTTGGTGACAAATTCCAGGTTAAATCTCCTCCTCAGTAATTTTGGGCCTTAGCTAATTTGTGGGCATTAAGTCCAATTTCACATAGTTGTCTGATTGAATTGATGATTGATTTTCAAGTGCAAAATTTTCTCTCTGAAGATGTTGACGCTCTCTTTTACTTATATTAAATTACCATAACCATTAAAAAATAGCGCGTGGAATCCGAGTTGACTAGGGAGAAGAAGAGAACATCAAGAACGGATGATTCAGTTAATTTAGTCGTTGCCATCATTCTCAATCATGTCATCCACTTCGGTAAAAGTCTAGGACCCATTAAATTATTTCTGCTTATCTGAATAAACATCATCCATATCAGTTTGTACATATCCGTTTCACTCAACTGTTGAACTTTTAAGTTGATTTTAAGTCAAGCACGGAATTTCAGTAGAGCGATGGGGATAGCAATAGTCAAATTTGAAATCTTAGGTGAGTTTGATGACTGTTTGCTTCAATAAGTAATGTGCAGTGTTGTTTTGGATGCAAGGCATGTGGTTTATTAATCACATATTGGTTGATGACTCATTTCCTCCCATTCAATAATGCCCATTTGCGTCTAGAAAGTATGAAAGTGACAACTGATCCAAAAGCTGCATAGCTCATGGTGTTGCCCTTTCTAGTTTTCTCCATTATTCTATCAAATTTGGATTTTCTTTCCATGCCTTTTACTCTCTCTCGCTCAAGCTTTGGTTTGAATTTTGATGTCAAAGCCAATACCCAGGAGCCAAAAATGATGATCTTTCCAAACAAGCAGAGTTTATATTAAACGGAAAAGCAAGCTCAAAACTGTCTTTCAAAACCCACAGAAATCCTTAGGCTATCCCTTATATGGTAGTGGGAAAGCCTTTTCTACACGCCTTTATAGGGAAATTGTAGTTTATTAATGTTGAGGATAGTATACTGCTGATATGGAAATATAGATCAAGTTTTACC

mRNA sequence

CCGACTCCCAGTTTATCCATGGCTGCTCTTCTTTCCTTATCTTCAAGTTCCTTGACCAGAACAGCCATTGCTCTGCCTCATCCAACCACTTCCTTCAAGGGAAATGTGAAGATTCTGAACTCAAAGCAGTTCAGCTTTTCTTCACTCAAGCTCAAATTCAAGGTGGGAGATGGAAAACCATTGGTTGTTCGCAGCCAGGCCGCTGCGTCTTCCTTGTCTGCCTCTCCCGTCGAGAGTGTGCGGTTCCGTCTGGACAATCTTGGACCACAGCAAGGTTCGAGGAAGAAGGGCAAGAGAAAGGGGAGAGGTATATCGGCGGGACAGGGTGGTAGCTGTGGATTTGGAATGAGAGGACAGAAATCAAGGTCTGGGCCTGGTGTAAGAAAAGGATTCGAAGGTGGACAGATGCCTCTTTATCGGAGAATTCCCAAACTTAGAGGAATTGCAGGAGGTATGCATGCTGGGTTACCTAAATATGTGCCAGTGAATCTGAAAGACATTGAAGCGGCAGGATTTCAGGAAGGGGAAGAGGTCTCTTTGGAAAGTTTGAAGGAGAAGGGCTTGATCAACCCATCAGGAAGAGAAAGGAAACTCCCATTAAAGATTTTAGCTGATGGAGAGCTAAGTGTGAAGCTAAATATCAAAGCTCGGGCTTTTTCATCAGCAGCAAAAGAGAAGCTTGAAGCTGTTGGCTGTTCCCTTACTGTATTACCTGGGCGAAAGAAGTGGGTTAAGCCATCAGTGGCTAAGAACCTCGCACGGGCTGATGAATACTTCGCAAAGAAAAGGGCTGCAGCAGCTGCTGCAGAACAAGCTGACTGACTCCAAAATTGCGGTTGGTGACAAATTCCAGGTTAAATCTCCTCCTCAGTAATTTTGGGCCTTAGCTAATTTGTGGGCATTAAGTCCAATTTCACATAGTTGTCTGATTGAATTGATGATTGATTTTCAAGTGCAAAATTTTCTCTCTGAAGATGTTGACGCTCTCTTTTACTTATATTAAATTACCATAACCATTAAAAAATAGCGCGTGGAATCCGAGTTGACTAGGGAGAAGAAGAGAACATCAAGAACGGATGATTCAGTTAATTTAGTCGTTGCCATCATTCTCAATCATGTCATCCACTTCGGTAAAAGTCTAGGACCCATTAAATTATTTCTGCTTATCTGAATAAACATCATCCATATCAGTTTGTACATATCCGTTTCACTCAACTGTTGAACTTTTAAGTTGATTTTAAGTCAAGCACGGAATTTCAGTAGAGCGATGGGGATAGCAATAGTCAAATTTGAAATCTTAGGTGAGTTTGATGACTGTTTGCTTCAATAAGTAATGTGCAGTGTTGTTTTGGATGCAAGGCATGTGGTTTATTAATCACATATTGGTTGATGACTCATTTCCTCCCATTCAATAATGCCCATTTGCGTCTAGAAAGTATGAAAGTGACAACTGATCCAAAAGCTGCATAGCTCATGGTGTTGCCCTTTCTAGTTTTCTCCATTATTCTATCAAATTTGGATTTTCTTTCCATGCCTTTTACTCTCTCTCGCTCAAGCTTTGGTTTGAATTTTGATGTCAAAGCCAATACCCAGGAGCCAAAAATGATGATCTTTCCAAACAAGCAGAGTTTATATTAAACGGAAAAGCAAGCTCAAAACTGTCTTTCAAAACCCACAGAAATCCTTAGGCTATCCCTTATATGGTAGTGGGAAAGCCTTTTCTACACGCCTTTATAGGGAAATTGTAGTTTATTAATGTTGAGGATAGTATACTGCTGATATGGAAATATAGATCAAGTTTTACC

Coding sequence (CDS)

ATGGCTGCTCTTCTTTCCTTATCTTCAAGTTCCTTGACCAGAACAGCCATTGCTCTGCCTCATCCAACCACTTCCTTCAAGGGAAATGTGAAGATTCTGAACTCAAAGCAGTTCAGCTTTTCTTCACTCAAGCTCAAATTCAAGGTGGGAGATGGAAAACCATTGGTTGTTCGCAGCCAGGCCGCTGCGTCTTCCTTGTCTGCCTCTCCCGTCGAGAGTGTGCGGTTCCGTCTGGACAATCTTGGACCACAGCAAGGTTCGAGGAAGAAGGGCAAGAGAAAGGGGAGAGGTATATCGGCGGGACAGGGTGGTAGCTGTGGATTTGGAATGAGAGGACAGAAATCAAGGTCTGGGCCTGGTGTAAGAAAAGGATTCGAAGGTGGACAGATGCCTCTTTATCGGAGAATTCCCAAACTTAGAGGAATTGCAGGAGGTATGCATGCTGGGTTACCTAAATATGTGCCAGTGAATCTGAAAGACATTGAAGCGGCAGGATTTCAGGAAGGGGAAGAGGTCTCTTTGGAAAGTTTGAAGGAGAAGGGCTTGATCAACCCATCAGGAAGAGAAAGGAAACTCCCATTAAAGATTTTAGCTGATGGAGAGCTAAGTGTGAAGCTAAATATCAAAGCTCGGGCTTTTTCATCAGCAGCAAAAGAGAAGCTTGAAGCTGTTGGCTGTTCCCTTACTGTATTACCTGGGCGAAAGAAGTGGGTTAAGCCATCAGTGGCTAAGAACCTCGCACGGGCTGATGAATACTTCGCAAAGAAAAGGGCTGCAGCAGCTGCTGCAGAACAAGCTGACTGA

Protein sequence

MAALLSLSSSSLTRTAIALPHPTTSFKGNVKILNSKQFSFSSLKLKFKVGDGKPLVVRSQAAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEKGLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKPSVAKNLARADEYFAKKRAAAAAAEQAD

Homology

[Close]

BLAST of CmaCh04G015020.1 vs. ExPASy Swiss-Prot
Match: P25873 (50S ribosomal protein L15, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL15 PE=1 SV=2)

HSP 1 Score: 337.4 bits (864), Expect = 1.5e-91
Identity = 193/274 (70.44%), Postives = 217/274 (79.20%), Query Frame = 0


Query: 1   MAALLSLSSSSLT-RTAIALPHPTTSFKGNVKILNSKQFSFSSLKLKFKVGD------GK 60
           MA  LS+SS+ LT R    L   +TSFKGNV +L +      SLKL   +         +
Sbjct: 1   MATPLSISSNPLTSRHCYRLHLSSTSFKGNVSVLGANPSQILSLKLNQTLKTRNQQQFAR 60

Query: 61  PLVVRSQAAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQ 120
           PLVV SQ AA+  S++ V   RFRLDNLGPQ GSRKK KRKGRGISAGQG SCGFGMRGQ
Sbjct: 61  PLVVVSQTAAT--SSAVVAPERFRLDNLGPQPGSRKKQKRKGRGISAGQGASCGFGMRGQ 120

Query: 121 KSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVS 180
           KSRSGPG+ +GFEGGQ  LYRR+PKLRGIAGGM +GLPKY+PVN+KDIE AGFQEG+EVS
Sbjct: 121 KSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYLPVNIKDIETAGFQEGDEVS 180

Query: 181 LESLKEKGLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPG 240
           LE+LK+KGLINPSGRERKLPLKIL  GELS+KL  KARAFS+ AKEKLEA GC+LTVLPG
Sbjct: 181 LETLKQKGLINPSGRERKLPLKILGTGELSMKLTFKARAFSTQAKEKLEASGCTLTVLPG 240

Query: 241 RKKWVKPSVAKNLARADEYFAKKRAAAAAAEQAD 268
           RKKWVKPSVAKN ARADEYFAKKRAAAA A  ++
Sbjct: 241 RKKWVKPSVAKNQARADEYFAKKRAAAAEAATSE 272

[Close]

BLAST of CmaCh04G015020.1 vs. ExPASy Swiss-Prot
Match: P22798 (50S ribosomal protein L15, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL15 PE=1 SV=3)

HSP 1 Score: 337.0 bits (863), Expect = 1.9e-91
Identity = 187/271 (69.00%), Postives = 221/271 (81.55%), Query Frame = 0


Query: 1   MAALLSLSSSSLTRTAIALPHPTTSFKGNVKILNSKQFSFSSLKLKFK---VGDGKPLVV 60
           MA+LLSLSS+    TA +  +P+++FKGN+       F+F+ LKL  +     +   LVV
Sbjct: 1   MASLLSLSSTP-PSTANSNNYPSSTFKGNINNFRINPFNFAPLKLHLRNIVKKESTRLVV 60

Query: 61  RSQAAASSLSAS--PVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKS 120
            + A++S++S S       RFRLDNLGPQ GSRKKGKRKGRG +AGQGGSCGFGMRGQKS
Sbjct: 61  VASASSSNVSPSIGSGSETRFRLDNLGPQPGSRKKGKRKGRGHAAGQGGSCGFGMRGQKS 120

Query: 121 RSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLE 180
           RSGPG+ +GFEGGQMPLYRRIPKLRGIAGGM AGLPKYVP+NL+DIE AGF+EGEEVSLE
Sbjct: 121 RSGPGIMRGFEGGQMPLYRRIPKLRGIAGGMRAGLPKYVPINLRDIEVAGFKEGEEVSLE 180

Query: 181 SLKEKGLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRK 240
           SLK KG+INPSGRER+LPLKIL +GELS KL IKARAFS +AKEKLEA GCS+TVLPGRK
Sbjct: 181 SLKAKGIINPSGRERRLPLKILGEGELSTKLQIKARAFSGSAKEKLEAAGCSVTVLPGRK 240

Query: 241 KWVKPSVAKNLARADEYFAKKRAAAAAAEQA 267
           K++K SV KNLARADEYFAKKRAA+A+  ++
Sbjct: 241 KYIKESVRKNLARADEYFAKKRAASASEAES 270

[Close]

BLAST of CmaCh04G015020.1 vs. ExPASy Swiss-Prot
Match: P31165 (50S ribosomal protein L15, chloroplastic (Fragment) OS=Pisum sativum OX=3888 GN=RPL15 PE=2 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 1.4e-86
Identity = 184/263 (69.96%), Postives = 210/263 (79.85%), Query Frame = 0


Query: 7   LSSSSLTRTAIALPHPTTSFKGNVKILNSKQFSFSSLKL---KFKVGDGKPLVVRSQAAA 66
           +S++SL   + +LP   + FKGNVK L +K      LK+   K +V      VV   A+A
Sbjct: 1   MSAASLIPVS-SLPSLASPFKGNVKTLVAKPCLCPCLKIQRTKLRVS-----VVNKAASA 60

Query: 67  SSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRK 126
            ++ +S  E+VRFRLDNLGPQ GSRK+ KRKGRGI+AGQG SCGFGMRGQKSRSGPG+ +
Sbjct: 61  YNVKSSG-ENVRFRLDNLGPQPGSRKRPKRKGRGIAAGQGASCGFGMRGQKSRSGPGIMR 120

Query: 127 GFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEKGLI 186
           GFEGGQMPLYRR+PKLRGIAGGMHAGLPKYV VNL DIE AGFQ+GEEVSLE+LK K +I
Sbjct: 121 GFEGGQMPLYRRLPKLRGIAGGMHAGLPKYVNVNLTDIENAGFQDGEEVSLETLKAKRVI 180

Query: 187 NPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKPSVA 246
           NPSGRERKLPLKILADGELS KL IKA AFS++AKEKLE  GCSL VLPGRKKWVKPSVA
Sbjct: 181 NPSGRERKLPLKILADGELSKKLTIKAGAFSTSAKEKLEYAGCSLIVLPGRKKWVKPSVA 240

Query: 247 KNLARADEYFAKKRAAAAAAEQA 267
           KNLARA+EYFAKKR    A+E A
Sbjct: 241 KNLARAEEYFAKKRGGETASEPA 256

[Close]

BLAST of CmaCh04G015020.1 vs. ExPASy Swiss-Prot
Match: P31160 (50S ribosomal protein L15 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=rplO PE=3 SV=2)

HSP 1 Score: 138.3 bits (347), Expect = 1.3e-31
Identity = 83/158 (52.53%), Postives = 107/158 (67.72%), Query Frame = 0


Query: 77  RLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI 136
           +LDNL PQ G++K+ +R GRGI+AGQG SCGFGMRGQKSRSG   R GFEGGQMPLYRR+
Sbjct: 2   KLDNLAPQPGAKKRKRRVGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRV 61

Query: 137 PKLRGIAGGMHAGLPK---YVPVNLKDIEAAGFQEGEEVSLESLKEKGLINPSGRERKLP 196
           PKL+      H  L     Y  VN+  +  AG   G EV+LESL   G++     +   P
Sbjct: 62  PKLK------HFPLINRKFYTVVNVGAL--AGLAAGTEVTLESLMAVGIVT----QNDGP 121

Query: 197 LKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVL 232
           LKIL DGELSV L++ A AF++ A++K+EA G S+ ++
Sbjct: 122 LKILGDGELSVSLSVSAAAFTATAQQKIEAAGGSIALV 147

[Close]

BLAST of CmaCh04G015020.1 vs. ExPASy Swiss-Prot
Match: Q5N0U8 (50S ribosomal protein L15 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=rplO PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.3e-31
Identity = 83/158 (52.53%), Postives = 107/158 (67.72%), Query Frame = 0


Query: 77  RLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI 136
           +LDNL PQ G++K+ +R GRGI+AGQG SCGFGMRGQKSRSG   R GFEGGQMPLYRR+
Sbjct: 2   KLDNLAPQPGAKKRKRRVGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRV 61

Query: 137 PKLRGIAGGMHAGLPK---YVPVNLKDIEAAGFQEGEEVSLESLKEKGLINPSGRERKLP 196
           PKL+      H  L     Y  VN+  +  AG   G EV+LESL   G++     +   P
Sbjct: 62  PKLK------HFPLINRKFYTVVNVGAL--AGLAAGTEVTLESLMAVGIVT----QNDGP 121

Query: 197 LKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVL 232
           LKIL DGELSV L++ A AF++ A++K+EA G S+ ++
Sbjct: 122 LKILGDGELSVSLSVSAAAFTATAQQKIEAAGGSIALV 147

[Close]

BLAST of CmaCh04G015020.1 vs. ExPASy TrEMBL
Match: A0A6J1J6D0 (50S ribosomal protein L15, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111482969 PE=3 SV=1)

HSP 1 Score: 496.9 bits (1278), Expect = 5.3e-137
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0


Query: 1   MAALLSLSSSSLTRTAIALPHPTTSFKGNVKILNSKQFSFSSLKLKFKVGDGKPLVVRSQ 60
           MAALLSLSSSSLTRTAIALPHPTTSFKGNVKILNSKQFSFSSLKLKFKVGDGKPLVVRSQ
Sbjct: 1   MAALLSLSSSSLTRTAIALPHPTTSFKGNVKILNSKQFSFSSLKLKFKVGDGKPLVVRSQ 60

Query: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 180
           VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 240

Query: 241 SVAKNLARADEYFAKKRAAAAAAEQAD 268
           SVAKNLARADEYFAKKRAAAAAAEQAD
Sbjct: 241 SVAKNLARADEYFAKKRAAAAAAEQAD 267

[Close]

BLAST of CmaCh04G015020.1 vs. ExPASy TrEMBL
Match: A0A6J1H0G5 (50S ribosomal protein L15, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111458464 PE=3 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 7.6e-136
Identity = 265/267 (99.25%), Postives = 265/267 (99.25%), Query Frame = 0


Query: 1   MAALLSLSSSSLTRTAIALPHPTTSFKGNVKILNSKQFSFSSLKLKFKVGDGKPLVVRSQ 60
           MAALLSLSSSSLTRTAIALPHPTT FKGNVKILNSKQFSFS LKLKFKVGDGKPLVVRSQ
Sbjct: 1   MAALLSLSSSSLTRTAIALPHPTTPFKGNVKILNSKQFSFSPLKLKFKVGDGKPLVVRSQ 60

Query: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 180
           VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 240

Query: 241 SVAKNLARADEYFAKKRAAAAAAEQAD 268
           SVAKNLARADEYFAKKRAAAAAAEQAD
Sbjct: 241 SVAKNLARADEYFAKKRAAAAAAEQAD 267

[Close]

BLAST of CmaCh04G015020.1 vs. ExPASy TrEMBL
Match: A0A0A0KUI5 (Ribosomal_L18e/L15P domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G609730 PE=3 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 2.5e-123
Identity = 244/266 (91.73%), Postives = 251/266 (94.36%), Query Frame = 0


Query: 1   MAALLSLSSSSLTRTAIALPHPTTSFKGNVKILNSKQFSFSSLKLKFKVGDGKPLVVRSQ 60
           MAAL SLSS SLTRTA ALP+PTTSFKGNV ILNSK  S SSL+LK K  DGK LVVR+Q
Sbjct: 1   MAALFSLSSPSLTRTATALPYPTTSFKGNVNILNSKHLSISSLRLKSKSVDGKHLVVRNQ 60

Query: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAASSLSASP E+VRFRLDNLGPQ GSRK+GKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAASSLSASPAENVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 180
           VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIE AGFQEGEEVSLESLKEK
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLESLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEA GCSLTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP 240

Query: 241 SVAKNLARADEYFAKKRAAAAAAEQA 267
           SVAKNLARA+EYFAKK+AAAAAAEQA
Sbjct: 241 SVAKNLARAEEYFAKKKAAAAAAEQA 266

[Close]

BLAST of CmaCh04G015020.1 vs. ExPASy TrEMBL
Match: A0A1S3BFG1 (50S ribosomal protein L15, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489288 PE=3 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 1.7e-122
Identity = 241/266 (90.60%), Postives = 251/266 (94.36%), Query Frame = 0


Query: 1   MAALLSLSSSSLTRTAIALPHPTTSFKGNVKILNSKQFSFSSLKLKFKVGDGKPLVVRSQ 60
           MAAL SLSS+SLTRTA ALP+PTTSFKGNV ILNSK  S SS KLKFK  DGK LVVR+Q
Sbjct: 1   MAALFSLSSTSLTRTATALPYPTTSFKGNVSILNSKHLSISSPKLKFKAVDGKHLVVRNQ 60

Query: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAASSL ASP ++VRFRLDNLGPQ GSRK+GKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAASSLYASPADNVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 180
           VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIE AGFQEGEEVSLE+LKEK
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEA GCSLTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP 240

Query: 241 SVAKNLARADEYFAKKRAAAAAAEQA 267
           SVAKNLARA+EYFAKK+AAAAAAEQ+
Sbjct: 241 SVAKNLARAEEYFAKKKAAAAAAEQS 266

[Close]

BLAST of CmaCh04G015020.1 vs. ExPASy TrEMBL
Match: A0A6J1DAS8 (50S ribosomal protein L15, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111018748 PE=3 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 2.0e-120
Identity = 237/266 (89.10%), Postives = 251/266 (94.36%), Query Frame = 0


Query: 1   MAALLSLSSSSLTRTAIALPHPTTSFKGNVKILNSKQFSFSSLKLKFKVGDGKPLVVRSQ 60
           MA+LLSLS+SSL+R A A+  PTTSFKG+VKILNSK F+ SS +LKFKVGDGK LV R+Q
Sbjct: 1   MASLLSLSASSLSRAATAVSLPTTSFKGDVKILNSKPFNISSFRLKFKVGDGKHLVFRNQ 60

Query: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAASSLSAS VE VRFRLDNLGPQ GSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAASSLSASSVEGVRFRLDNLGPQPGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 180
           VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIE AGFQEGEEVSLE+LKEK
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKIL DGELSVKLNIKAR+FSSAAK+KLEAVGCSLTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILGDGELSVKLNIKARSFSSAAKQKLEAVGCSLTVLPGRKKWVKP 240

Query: 241 SVAKNLARADEYFAKKRAAAAAAEQA 267
           SVAKNLARA+EYFAKK+AAAAA +QA
Sbjct: 241 SVAKNLARAEEYFAKKKAAAAAEDQA 266

[Close]

BLAST of CmaCh04G015020.1 vs. NCBI nr
Match: XP_022984826.1 (50S ribosomal protein L15, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 496.9 bits (1278), Expect = 1.1e-136
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0


Query: 1   MAALLSLSSSSLTRTAIALPHPTTSFKGNVKILNSKQFSFSSLKLKFKVGDGKPLVVRSQ 60
           MAALLSLSSSSLTRTAIALPHPTTSFKGNVKILNSKQFSFSSLKLKFKVGDGKPLVVRSQ
Sbjct: 1   MAALLSLSSSSLTRTAIALPHPTTSFKGNVKILNSKQFSFSSLKLKFKVGDGKPLVVRSQ 60

Query: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 180
           VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 240

Query: 241 SVAKNLARADEYFAKKRAAAAAAEQAD 268
           SVAKNLARADEYFAKKRAAAAAAEQAD
Sbjct: 241 SVAKNLARADEYFAKKRAAAAAAEQAD 267

[Close]

BLAST of CmaCh04G015020.1 vs. NCBI nr
Match: XP_022956924.1 (50S ribosomal protein L15, chloroplastic-like [Cucurbita moschata] >KAG6601285.1 50S ribosomal protein L15, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032073.1 50S ribosomal protein L15, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 493.0 bits (1268), Expect = 1.6e-135
Identity = 265/267 (99.25%), Postives = 265/267 (99.25%), Query Frame = 0


Query: 1   MAALLSLSSSSLTRTAIALPHPTTSFKGNVKILNSKQFSFSSLKLKFKVGDGKPLVVRSQ 60
           MAALLSLSSSSLTRTAIALPHPTT FKGNVKILNSKQFSFS LKLKFKVGDGKPLVVRSQ
Sbjct: 1   MAALLSLSSSSLTRTAIALPHPTTPFKGNVKILNSKQFSFSPLKLKFKVGDGKPLVVRSQ 60

Query: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 180
           VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 240

Query: 241 SVAKNLARADEYFAKKRAAAAAAEQAD 268
           SVAKNLARADEYFAKKRAAAAAAEQAD
Sbjct: 241 SVAKNLARADEYFAKKRAAAAAAEQAD 267

[Close]

BLAST of CmaCh04G015020.1 vs. NCBI nr
Match: XP_023521047.1 (50S ribosomal protein L15, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 491.9 bits (1265), Expect = 3.5e-135
Identity = 266/268 (99.25%), Postives = 267/268 (99.63%), Query Frame = 0


Query: 1   MAALLSLSSSSLTRTAIALPHPTTSFKGNVKILNSKQFSFSSLKLKFKVGDGKPLVVRSQ 60
           MAALLSLSSSSLTRTAIALPHPTTSFKGNVK+LNSKQFSFSSLKLKFKVGDGKPLVVRSQ
Sbjct: 1   MAALLSLSSSSLTRTAIALPHPTTSFKGNVKVLNSKQFSFSSLKLKFKVGDGKPLVVRSQ 60

Query: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 180
           VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 240

Query: 241 SVAKNLARADEYFAKKR-AAAAAAEQAD 268
           SVAKNLARADEYFAKKR AAAAAAEQAD
Sbjct: 241 SVAKNLARADEYFAKKRAAAAAAAEQAD 268

[Close]

BLAST of CmaCh04G015020.1 vs. NCBI nr
Match: XP_038891383.1 (50S ribosomal protein L15, chloroplastic [Benincasa hispida])

HSP 1 Score: 458.0 bits (1177), Expect = 5.6e-125
Identity = 245/263 (93.16%), Postives = 253/263 (96.20%), Query Frame = 0


Query: 1   MAALLSLSSSSLTRTAIALPHPTTSFKGNVKILNSKQFSFSSLKLKFKVGDGKPLVVRSQ 60
           MAALLSLSS+SLTRTA ALP+PTTSFKGNVKILN KQ + SSL+LKFKVGDGK LVVR+Q
Sbjct: 1   MAALLSLSSTSLTRTATALPYPTTSFKGNVKILNPKQLTISSLRLKFKVGDGKHLVVRNQ 60

Query: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           A ASSLSASPVESVRFRLDNLGPQ GSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  APASSLSASPVESVRFRLDNLGPQPGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 180
           VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIE AGFQEGEEVSLE+LKEK
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEA GCSLTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP 240

Query: 241 SVAKNLARADEYFAKKRAAAAAA 264
           SVAKNLARA+EYFAKK+AAAA A
Sbjct: 241 SVAKNLARAEEYFAKKKAAAATA 263

[Close]

BLAST of CmaCh04G015020.1 vs. NCBI nr
Match: XP_004135093.1 (50S ribosomal protein L15, chloroplastic [Cucumis sativus] >KGN52087.1 hypothetical protein Csa_008981 [Cucumis sativus])

HSP 1 Score: 451.4 bits (1160), Expect = 5.3e-123
Identity = 244/266 (91.73%), Postives = 251/266 (94.36%), Query Frame = 0


Query: 1   MAALLSLSSSSLTRTAIALPHPTTSFKGNVKILNSKQFSFSSLKLKFKVGDGKPLVVRSQ 60
           MAAL SLSS SLTRTA ALP+PTTSFKGNV ILNSK  S SSL+LK K  DGK LVVR+Q
Sbjct: 1   MAALFSLSSPSLTRTATALPYPTTSFKGNVNILNSKHLSISSLRLKSKSVDGKHLVVRNQ 60

Query: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAASSLSASP E+VRFRLDNLGPQ GSRK+GKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAASSLSASPAENVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 180
           VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIE AGFQEGEEVSLESLKEK
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLESLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEA GCSLTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP 240

Query: 241 SVAKNLARADEYFAKKRAAAAAAEQA 267
           SVAKNLARA+EYFAKK+AAAAAAEQA
Sbjct: 241 SVAKNLARAEEYFAKKKAAAAAAEQA 266

[Close]

BLAST of CmaCh04G015020.1 vs. TAIR 10
Match: AT3G25920.1 (ribosomal protein L15 )

HSP 1 Score: 337.4 bits (864), Expect = 1.0e-92
Identity = 193/274 (70.44%), Postives = 217/274 (79.20%), Query Frame = 0


Query: 1   MAALLSLSSSSLT-RTAIALPHPTTSFKGNVKILNSKQFSFSSLKLKFKVGD------GK 60
           MA  LS+SS+ LT R    L   +TSFKGNV +L +      SLKL   +         +
Sbjct: 1   MATPLSISSNPLTSRHCYRLHLSSTSFKGNVSVLGANPSQILSLKLNQTLKTRNQQQFAR 60

Query: 61  PLVVRSQAAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQ 120
           PLVV SQ AA+  S++ V   RFRLDNLGPQ GSRKK KRKGRGISAGQG SCGFGMRGQ
Sbjct: 61  PLVVVSQTAAT--SSAVVAPERFRLDNLGPQPGSRKKQKRKGRGISAGQGASCGFGMRGQ 120

Query: 121 KSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVS 180
           KSRSGPG+ +GFEGGQ  LYRR+PKLRGIAGGM +GLPKY+PVN+KDIE AGFQEG+EVS
Sbjct: 121 KSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYLPVNIKDIETAGFQEGDEVS 180

Query: 181 LESLKEKGLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPG 240
           LE+LK+KGLINPSGRERKLPLKIL  GELS+KL  KARAFS+ AKEKLEA GC+LTVLPG
Sbjct: 181 LETLKQKGLINPSGRERKLPLKILGTGELSMKLTFKARAFSTQAKEKLEASGCTLTVLPG 240

Query: 241 RKKWVKPSVAKNLARADEYFAKKRAAAAAAEQAD 268
           RKKWVKPSVAKN ARADEYFAKKRAAAA A  ++
Sbjct: 241 RKKWVKPSVAKNQARADEYFAKKRAAAAEAATSE 272

[Close]

BLAST of CmaCh04G015020.1 vs. TAIR 10
Match: AT5G64670.1 (Ribosomal protein L18e/L15 superfamily protein )

HSP 1 Score: 58.5 bits (140), Expect = 9.3e-09
Identity = 59/185 (31.89%), Postives = 97/185 (52.43%), Query Frame = 0


Query: 53  KPLVVRSQAAASSLSASPVESVR-FRLDNLGPQQGS--RKKGKRKGRGISAGQGGSCGFG 112
           +P  + +Q   S+  A   + +R + L +L   + +  RK   RKGRGI +G+G + G G
Sbjct: 37  RPSPISTQIPTSTSRALSFQGIRAYSLLSLNDLRDNVPRKLKTRKGRGIGSGKGKTAGRG 96

Query: 113 MRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNL----KDIEAAG 172
            +GQK+R    ++ GFEGGQ PL RR+PK RG           + PV L    K I A  
Sbjct: 97  HKGQKARG--TMKFGFEGGQTPLRRRLPK-RGFKNKFKL---HFQPVGLGKIAKLINAGK 156

Query: 173 FQEGEEVSLESLKEKGLINPSGRERKLPLKILADGELSVK--LNIKARAFSSAAKEKLEA 229
               E +++++LK+ G I   G++ +  ++++  G   +K  L+ +    +  AKE +EA
Sbjct: 157 IDSHELITMKTLKDVGAI---GKQIEDGVRLMGRGADDIKWPLHFEVSRVTVRAKEVVEA 212

The following BLAST results are available for this feature:

BLAST of CmaCh04G015020.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P25873	1.5e-91	70.44	50S ribosomal protein L15, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL1...	[more]
P22798	1.9e-91	69.00	50S ribosomal protein L15, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL15 P...	[more]
P31165	1.4e-86	69.96	50S ribosomal protein L15, chloroplastic (Fragment) OS=Pisum sativum OX=3888 GN=...	[more]
P31160	1.3e-31	52.53	50S ribosomal protein L15 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-80...	[more]
Q5N0U8	1.3e-31	52.53	50S ribosomal protein L15 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / S...	[more]

BLAST of CmaCh04G015020.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J6D0	5.3e-137	100.00	50S ribosomal protein L15, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1H0G5	7.6e-136	99.25	50S ribosomal protein L15, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A0A0KUI5	2.5e-123	91.73	Ribosomal_L18e/L15P domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_...	[more]
A0A1S3BFG1	1.7e-122	90.60	50S ribosomal protein L15, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489288...	[more]
A0A6J1DAS8	2.0e-120	89.10	50S ribosomal protein L15, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11...	[more]

BLAST of CmaCh04G015020.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022984826.1	1.1e-136	100.00	50S ribosomal protein L15, chloroplastic-like [Cucurbita maxima]	[more]
XP_022956924.1	1.6e-135	99.25	50S ribosomal protein L15, chloroplastic-like [Cucurbita moschata] >KAG6601285.1...	[more]
XP_023521047.1	3.5e-135	99.25	50S ribosomal protein L15, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_038891383.1	5.6e-125	93.16	50S ribosomal protein L15, chloroplastic [Benincasa hispida]	[more]
XP_004135093.1	5.3e-123	91.73	50S ribosomal protein L15, chloroplastic [Cucumis sativus] >KGN52087.1 hypotheti...	[more]

BLAST of CmaCh04G015020.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25920.1	1.0e-92	70.44	ribosomal protein L15	[more]
AT5G64670.1	9.3e-09	31.89	Ribosomal protein L18e/L15 superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021131	Ribosomal protein L18e/L15P	PFAM	PF00828	Ribosomal_L27A	coord: 102..229 e-value: 1.2E-30 score: 106.8
None	No IPR available	GENE3D	3.100.10.10		coord: 153..230 e-value: 2.3E-19 score: 71.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..126
None	No IPR available	PANTHER	PTHR12934:SF13	BNAA06G33230D PROTEIN	coord: 5..263
IPR005749	Ribosomal protein L15, bacterial-type	TIGRFAM	TIGR01071	TIGR01071	coord: 78..228 e-value: 7.9E-39 score: 130.7
IPR005749	Ribosomal protein L15, bacterial-type	PANTHER	PTHR12934	50S RIBOSOMAL PROTEIN L15	coord: 5..263
IPR001196	Ribosomal protein L15, conserved site	PROSITE	PS00475	RIBOSOMAL_L15	coord: 195..225
IPR030878	Ribosomal protein L15	HAMAP	MF_01341	Ribosomal_L15	coord: 78..231 score: 18.338247
IPR036227	Ribosomal L18e/L15P superfamily	SUPERFAMILY	52080	Ribosomal proteins L15p and L18e	coord: 79..230

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh04G015020	CmaCh04G015020	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh04G015020.1:exon:3904	CmaCh04G015020.1:exon:3904	exon
CmaCh04G015020.1:exon:3905	CmaCh04G015020.1:exon:3905	exon
CmaCh04G015020.1:exon:3906	CmaCh04G015020.1:exon:3906	exon
CmaCh04G015020.1:exon:3907	CmaCh04G015020.1:exon:3907	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh04G015020.1:five_prime_utr	CmaCh04G015020.1:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh04G015020.1:cds	CmaCh04G015020.1:cds	CDS
CmaCh04G015020.1:cds	CmaCh04G015020.1:cds_2	CDS
CmaCh04G015020.1:cds	CmaCh04G015020.1:cds_3	CDS
CmaCh04G015020.1:cds	CmaCh04G015020.1:cds_4	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh04G015020.1:three_prime_utr	CmaCh04G015020.1:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh04G015020.1	CmaCh04G015020.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
cellular_component	GO:0022625	cytosolic large ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003729	mRNA binding