Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGAAATGAAAAGAGAAGAGGCGAGAGAGAAGGCAATGGCGACAGTTTTGTTTGGTGAGACAACAACGTCTTGAGAGAGAGACGTATGTGCTGACAAGCTCCGCCGAAAGATAAGCCCTTCTCCTCTTTCTTTTCAAATAAACATTATTCAACTTCAACATAATTGCGTTATCTTCTTGGCGTTTTTCAGCAGCAAATCGACTCATTAGTTTTAAATTACATACAGCGTTTGGATTTGATTCTCAATGGGTTTTTTCTGTTTTTTTTTTTTTTTTTTAAAGGAAGATGAGTGGGCAAAGCGAATGGTCCAAAACGCACGCCAAGTGTTTGTGAAAATGTTTGCGTCATTTAGACACGCCAATGGCATCGGTTGGGCGGGCAGGGGGAAAGAGGCGTACTGCCAGCGCCGCCCATGGGCGGATTATTCATCATGCCTGACTCATCTCCACATGATAAGCGAAGGGTATGTTTTGAATCACTGCTTTTTTATGGGGAATTTGTATTCTGAACTGTGCATGATTCATTCTTTTAATTGTGAATTATTTGTCAAATTAGGGCTAATCTGATCCCACCATTTATGATCCTTTGCCCTCTTTATTTGTTTATGTTAGATTCCCTTCCACATGA mRNA sequence ATGGAAATGAAAAGAGAAGAGGCGAGAGAGAAGGCAATGGCGACAGAAGATGAGTGGGCAAAGCGAATGGTCCAAAACGCACGCCAAGTGTTTGTGAAAATGTTTGCGTCATTTAGACACGCCAATGGCATCGGTTGGGCGGGCAGGGGGAAAGAGGCGTACTGCCAGCGCCGCCCATGGGCGGATTATTCATCATGCCTGACTCATCTCCACATGATAAGCGAAGGATTCCCTTCCACATGA Coding sequence (CDS) ATGGAAATGAAAAGAGAAGAGGCGAGAGAGAAGGCAATGGCGACAGAAGATGAGTGGGCAAAGCGAATGGTCCAAAACGCACGCCAAGTGTTTGTGAAAATGTTTGCGTCATTTAGACACGCCAATGGCATCGGTTGGGCGGGCAGGGGGAAAGAGGCGTACTGCCAGCGCCGCCCATGGGCGGATTATTCATCATGCCTGACTCATCTCCACATGATAAGCGAAGGATTCCCTTCCACATGA Protein sequence MEMKREEAREKAMATEDEWAKRMVQNARQVFVKMFASFRHANGIGWAGRGKEAYCQRRPWADYSSCLTHLHMISEGFPST
Homology
BLAST of CmaCh04G010000.1 vs. NCBI nr
Match: XP_023513511.1 (uncharacterized protein LOC111778095 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 114.8 bits (286), Expect = 3.5e-22 Identity = 52/54 (96.30%), Postives = 52/54 (96.30%), Query Frame = 0 Query: 23 MVQNARQVFVKMFASFRHANGIGWAGRGKEAYCQRRPWADYSSCLTHLHMISEG 77 MVQNARQVFVKMFASFRHANGIGWA R KEAYCQRRPWADYSSCLTHLHMISEG Sbjct: 1 MVQNARQVFVKMFASFRHANGIGWADRVKEAYCQRRPWADYSSCLTHLHMISEG 54
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_023513511.1 | 3.5e-22 | 96.30 | uncharacterized protein LOC111778095 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
CmaCh04G010000.1:exon:3555 | CmaCh04G010000.1:exon:3555 | exon |
CmaCh04G010000.1:exon:3556 | CmaCh04G010000.1:exon:3556 | exon |
CmaCh04G010000.1:exon:3557 | CmaCh04G010000.1:exon:3557 | exon |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
CmaCh04G010000.1:cds | CmaCh04G010000.1:cds | CDS |
CmaCh04G010000.1:cds | CmaCh04G010000.1:cds_2 | CDS |
CmaCh04G010000.1:cds | CmaCh04G010000.1:cds_3 | CDS |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
CmaCh04G010000.1 | CmaCh04G010000.1-protein | polypeptide |
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