CmaCh04G009060.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G009060.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Thioredoxin domain-containing protein
Location	Cma_Chr04: 4711490 .. 4714195 (+)
Sequence length	816
RNA-Seq Expression	CmaCh04G009060.1
Synteny	CmaCh04G009060.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATTTTGCCCAGGACCTTCACGCTTTCTCGCCTCGCACTCACAGCTACCGTTCTCTCTAATTCCTTCCTCCCATGGCTACGGTTCTCGGTTCCCTCGCTCTTCCCTCTTCCTCCGTCTTGGCTTCCACCACCTTCTCCGGCCGTCGGACCTCCCTCGTGCTTCCGCGCTACAGAGCATTGAAGATCGGACACAGCTTCACTTCCCATTCTGTAAAATCTGCGAGATCGAATGCCAGATTTACTCATCGTTCTGACAGAGTCGTCTGCGACGGTCAGGAAACTTCTTCCATAGGTTCGGATTTTGTTCTGTTGTTTTCTTTTATTGTGTTGTTTGGCTTTTGGGAGAAGGGAAGAAAGGAAAATTTAGGACACTTGTAAGTTTGGTGAATTGATGAAGATCATACTCTTGAGTATCTATTGGTGTTTGGTTTGGTTTTGATAAAAGTTGAAACTAAACTGTATAATTAACAAATAGTAGGTTAGATCATTACTAGAGTTATATGCGGCAACTACTTGTGCGTTAAATGAAGTCTCACAAATAGTGTCTACCATTAAAAGCTTCGAACACATCGAGTATATTGTAGTTGTCCATGTTAAGTGAAGTGACCTCTTGTATTTAGTTGATTTTGTGGGTTCAGTAGCTGACTGATGAAAAAGGAGTTGGCCAATTTTCAAAGAAGCTGCATTAAATTGTCAATTTTCAATTCCTTTTTTATCCAATCAACTACTTAACTTTGACAGGTAGCTAACTGTCAGGCATTCAATCCTTCTCTTATTTATAAGGGGAGGATTGTTTATGAGGTTTTATCAATAGGGATATAATTATAACTTTTAAAACCATAAGGATTAAATCTAACTTTCTCCAAACTATTGGGATCACATTTGTAATTCACCTACTATGTTTTAGTCCTCTGAAGCCTGACAGATTTGAAGGTAAAATCCTGGGATGGCAAGTTGCAATCAATCTAAATTGGGCTGTGGAAATGTGTTTCCATTTGAAAGTGAAAGATCAAGCATTAAAATTTCAAATGAATTACTACATTAACCATAAAGATTGGATAGCAAGAGTTAACTACTGATTAAGGTATATTCTCTCGACCAAGAGATCATATATCTATAACTAAATTATGCTTAACTCATGTGCTTAAGATATGTACACTTGGTCATAATGTCCAAAGTGCTCCATATCCCTCCCGTAGAGGTTTTCTGGGTTTGTTGCAGTTGGAAGAGAGGTGCCTCTGATACCAACTTAAGTTATAAAATGAAGGGAATGTACTTAATGTTGCTCAGTGGGCAAAATAAATTATATGTGATTGGAGCTCTTCTTTAGTTTATATGTTGCCATGGTCAATCAGTGGACACCCAATAGGTGAGTGACAAACCAATTCTCTGCACCCTTGTGAATATGATTTCTGCTGTGCCTGGGTCTTATGCCGTTATAGAGAGTCGTCAGTAGGGAGCTGGTCTGATACTGGCTCAGTTTGTTTGGAATTTTGGAGAAAGTGGTTTACTCGTCTCTCTCTCCTGGTTCTTCCCGGTAACCCCATTCTTTTGCGTGTGTATGAGTGAGCATGTTTTGGTGTATGCATCTTGATTTGCAGGGGAGCCAACATTTACCTTTTATGTATGGCATGAGATTCTGAGTCATTTACAGCATTTGTTGTTGGTTGTCTTTCCTGCACACCATTTTTTATTGTTATTATGAATCGTTAATTTGGAATAACAGATGTTTAAGTATAGAAAAACGTTTACCAAATAGTGCATTTAAGCTATACCTTTATATTCTAATATATACACATGCATGAACATATTTATTTTATCTATGAAGATCATGGGGTGGGGACGTCGAAATATTTAGTTTTGAGTATTAAGAATGTGATACTTTCAATTGACTTTGAGTTCAGGCTCTGTATCATTGGTTGTACTGATTCTTGATCACTTGCCTTTGGGATAATTCCTGCAGTGTGACAGCACTCAGTTCATGTTAGAACATTCACATAGGAATTTGTTATCCATAAAATAACATTTTAATCTATATTTTCTTTTGACTCTTCTCTTCCGTCTGACTGATTCTCAGATCAGCAATATACCTGCAACTACTTTTTATTTCTCTAACTTTCTTCCCCCCAAAAGAAAGCCCTTGTCGAGGTTTAACAAATCACATGTTTCTCGAATGTTGCAGTACCTTCTGCTTCAGAAGCTACTTGGCAGTCACAGGTTATTGAATCTCGTGTACCGGTTCTAGTTGAATTCTGGGCTCCATGGTGCGGTCCTTGCCGAATGATTCATCCGGTTGTTGATGAACTATCCAAGGAGTATGCAGGAAAGTTTAAATTTTACAAGGTAAATACTGATCAGGAAGCTGAGATTGCATCCCGATATGCTATCAGAAGCGTCCCCACTGTCATTATCTTCAAAAATGGTGAGAAGAAGGAGGCAATAATTGGTGCAGTTACCAAAACAACTCTGACTGACAGCATGGACAAATTCTTGTAGAGATGGGTGATAAAAAAGTACGTATAGAAAGAATAAAAGCTGCTTTCTCATAGTTTATTGAATTTCTCCTCTAAATCTGATGATGAATTCTCTAGTCTGGAAATAAACTCTCCTCGTTTTTACAAATAGTTCTTAATGCAACTGTATCTTCTTTGGTCATGTTTATTGCCACAATACCTTTTCTATGAATGCATCTTTTTTTTTTTTT

mRNA sequence

CAAATTTTGCCCAGGACCTTCACGCTTTCTCGCCTCGCACTCACAGCTACCGTTCTCTCTAATTCCTTCCTCCCATGGCTACGGTTCTCGGTTCCCTCGCTCTTCCCTCTTCCTCCGTCTTGGCTTCCACCACCTTCTCCGGCCGTCGGACCTCCCTCGTGCTTCCGCGCTACAGAGCATTGAAGATCGGACACAGCTTCACTTCCCATTCTGTAAAATCTGCGAGATCGAATGCCAGATTTACTCATCGTTCTGACAGAGTCGTCTGCGACGGTCAGGAAACTTCTTCCATAGTACCTTCTGCTTCAGAAGCTACTTGGCAGTCACAGGTTATTGAATCTCGTGTACCGGTTCTAGTTGAATTCTGGGCTCCATGGTGCGGTCCTTGCCGAATGATTCATCCGGTTGTTGATGAACTATCCAAGGAGTATGCAGGAAAGTTTAAATTTTACAAGGTAAATACTGATCAGGAAGCTGAGATTGCATCCCGATATGCTATCAGAAGCGTCCCCACTGTCATTATCTTCAAAAATGGTGAGAAGAAGGAGGCAATAATTGGTGCAGTTACCAAAACAACTCTGACTGACAGCATGGACAAATTCTTGTAGAGATGGGTGATAAAAAAGTACGTATAGAAAGAATAAAAGCTGCTTTCTCATAGTTTATTGAATTTCTCCTCTAAATCTGATGATGAATTCTCTAGTCTGGAAATAAACTCTCCTCGTTTTTACAAATAGTTCTTAATGCAACTGTATCTTCTTTGGTCATGTTTATTGCCACAATACCTTTTCTATGAATGCATCTTTTTTTTTTTTT

Coding sequence (CDS)

ATGGCTACGGTTCTCGGTTCCCTCGCTCTTCCCTCTTCCTCCGTCTTGGCTTCCACCACCTTCTCCGGCCGTCGGACCTCCCTCGTGCTTCCGCGCTACAGAGCATTGAAGATCGGACACAGCTTCACTTCCCATTCTGTAAAATCTGCGAGATCGAATGCCAGATTTACTCATCGTTCTGACAGAGTCGTCTGCGACGGTCAGGAAACTTCTTCCATAGTACCTTCTGCTTCAGAAGCTACTTGGCAGTCACAGGTTATTGAATCTCGTGTACCGGTTCTAGTTGAATTCTGGGCTCCATGGTGCGGTCCTTGCCGAATGATTCATCCGGTTGTTGATGAACTATCCAAGGAGTATGCAGGAAAGTTTAAATTTTACAAGGTAAATACTGATCAGGAAGCTGAGATTGCATCCCGATATGCTATCAGAAGCGTCCCCACTGTCATTATCTTCAAAAATGGTGAGAAGAAGGAGGCAATAATTGGTGCAGTTACCAAAACAACTCTGACTGACAGCATGGACAAATTCTTGTAG

Protein sequence

MATVLGSLALPSSSVLASTTFSGRRTSLVLPRYRALKIGHSFTSHSVKSARSNARFTHRSDRVVCDGQETSSIVPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYAGKFKFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL

Homology

[Close]

BLAST of CmaCh04G009060.1 vs. ExPASy Swiss-Prot
Match: Q9SEU6 (Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g15360 PE=2 SV=2)

HSP 1 Score: 174.1 bits (440), Expect = 1.4e-42
Identity = 88/174 (50.57%), Postives = 120/174 (68.97%), Query Frame = 0


Query: 8   LALPSSSVLASTTFSGRRTSLV-LPRYRALKIGHSFTSHSVKSARSNARFTHRSDRVVCD 67
           +A   SS  A+ + S RR S      +R LK   S  + S     +      R  R+ C+
Sbjct: 18  IAASVSSSSAAPSVSRRRISPARFLEFRGLKSSRSLVTQSASLGANRRTRIARGGRIACE 77

Query: 68  GQETSSI---VPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYAGKF 127
            Q+T++    VP+ S++ WQ++V+ES VPVLVEFWAPWCGPCRMIHP+VD+L+K++AGKF
Sbjct: 78  AQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKF 137

Query: 128 KFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL 178
           KFYK+NTD+    A+RY IRSVPTVIIFK GEKK++IIGAV + TL  ++++FL
Sbjct: 138 KFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPRETLEKTIERFL 191

[Close]

BLAST of CmaCh04G009060.1 vs. ExPASy Swiss-Prot
Match: Q7X8R5 (Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0530600 PE=2 SV=2)

HSP 1 Score: 160.6 bits (405), Expect = 1.6e-38
Identity = 92/186 (49.46%), Postives = 121/186 (65.05%), Query Frame = 0


Query: 1   MATVLGSLALPSSSVLAS---TTFSGRRTSLVLP----RYRALKIGHSFTSHSVKSARSN 60
           MA+ L +     SS LAS   +  S RR   V P    RY+AL+    F          N
Sbjct: 1   MASALAASTAVCSSPLASASASASSARRLRAVPPSRGIRYQALRADSGFA--------GN 60

Query: 61  ARFTHRSDRVVC--DGQETSSIVPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPV 120
            R   R   VVC   GQ+TS  VP  +++TWQS V+ES +PVLV +WA WCGPC+MI PV
Sbjct: 61  RRGGGRGASVVCAVQGQDTSIQVPEVTKSTWQSLVMESELPVLVGYWATWCGPCKMIDPV 120

Query: 121 VDELSKEYAGKFKFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTD 178
           V +LSKEY GK K YK+NTD+  +IAS+Y +RS+PT++IFKNGEKK+A+IGAV ++TL  
Sbjct: 121 VGKLSKEYEGKLKCYKLNTDENPDIASQYGVRSIPTMMIFKNGEKKDAVIGAVPESTLIA 178

[Close]

BLAST of CmaCh04G009060.1 vs. ExPASy Swiss-Prot
Match: P07591 (Thioredoxin M-type, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=2)

HSP 1 Score: 160.2 bits (404), Expect = 2.1e-38
Identity = 78/148 (52.70%), Postives = 108/148 (72.97%), Query Frame = 0


Query: 30  LPRYRALKIGHSFTSHSVKSARSNARFTHRSDRVVCDGQETSSIVPSASEATWQSQVIES 89
           +P +R LK      S SV S+ S  +F + S  VVC   E    V   ++++W+  V+ES
Sbjct: 35  VPTFRGLKRSFPALSSSVSSS-SPRQFRYSS--VVCKASEAVKEVQDVNDSSWKEFVLES 94

Query: 90  RVPVLVEFWAPWCGPCRMIHPVVDELSKEYAGKFKFYKVNTDQEAEIASRYAIRSVPTVI 149
            VPV+V+FWAPWCGPC++I PV+DEL+KEY+GK   YK+NTD+   IA++Y IRS+PTV+
Sbjct: 95  EVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVL 154

Query: 150 IFKNGEKKEAIIGAVTKTTLTDSMDKFL 178
            FKNGE+KE+IIGAV K+TLTDS++K+L
Sbjct: 155 FFKNGERKESIIGAVPKSTLTDSIEKYL 179

[Close]

BLAST of CmaCh04G009060.1 vs. ExPASy Swiss-Prot
Match: O48737 (Thioredoxin M1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g03680 PE=1 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.7e-38
Identity = 74/158 (46.84%), Postives = 111/158 (70.25%), Query Frame = 0


Query: 20  TFSGRRTSLVLPRYRALKIGHSFTSHSVKSARSNARFTHRSDRVVCDGQETSSIVPSASE 79
           +FS R+   VLP    L+     T  S+ S   N+R +     V+C+ Q+T++ +P  ++
Sbjct: 27  SFSTRQMFSVLPESSGLR-----TRVSLSSLSKNSRVSRLRRGVICEAQDTATGIPVVND 86

Query: 80  ATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYAGKFKFYKVNTDQEAEIASR 139
           +TW S V+++  PV V+FWAPWCGPC+MI P+V+EL+++YAG+FKFYK+NTD+      +
Sbjct: 87  STWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATPGQ 146

Query: 140 YAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL 178
           Y +RS+PT++IF NGEKK+ IIGAV+K TL  S++KFL
Sbjct: 147 YGVRSIPTIMIFVNGEKKDTIIGAVSKDTLATSINKFL 179

[Close]

BLAST of CmaCh04G009060.1 vs. ExPASy Swiss-Prot
Match: Q9SEU8 (Thioredoxin M2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TRXM2 PE=1 SV=2)

HSP 1 Score: 158.7 bits (400), Expect = 6.1e-38
Identity = 77/165 (46.67%), Postives = 112/165 (67.88%), Query Frame = 0


Query: 13  SSVLASTTFSGRRTSLVLPRYRALKIGHSFTSHSVKSARSNARFTHRSDRVVCDGQETSS 72
           SS  ++++ S RR   VLP    L+I  S +  S+ S     R +     VVC+ QET++
Sbjct: 22  SSSPSASSLSSRRMFAVLPESSGLRIRLSLSPASLTSIH-QPRVSRLRRAVVCEAQETTT 81

Query: 73  IVPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYAGKFKFYKVNTDQ 132
            +   +++TW S V+++  PV+V+FWAPWCGPC+MI P+V++L++ Y GK KFYK+NTD+
Sbjct: 82  DIQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDE 141

Query: 133 EAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL 178
                 +Y +RS+PT++IF  GEKK+ IIGAV KTTLT S+DKFL
Sbjct: 142 SPNTPGQYGVRSIPTIMIFVGGEKKDTIIGAVPKTTLTSSLDKFL 185

[Close]

BLAST of CmaCh04G009060.1 vs. ExPASy TrEMBL
Match: A0A6J1IKG3 (uncharacterized protein LOC111477886 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477886 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 7.7e-92
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MATVLGSLALPSSSVLASTTFSGRRTSLVLPRYRALKIGHSFTSHSVKSARSNARFTHRS 60
           MATVLGSLALPSSSVLASTTFSGRRTSLVLPRYRALKIGHSFTSHSVKSARSNARFTHRS
Sbjct: 1   MATVLGSLALPSSSVLASTTFSGRRTSLVLPRYRALKIGHSFTSHSVKSARSNARFTHRS 60

Query: 61  DRVVCDGQETSSIVPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYA 120
           DRVVCDGQETSSIVPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYA
Sbjct: 61  DRVVCDGQETSSIVPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYA 120

Query: 121 GKFKFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL 178
           GKFKFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL
Sbjct: 121 GKFKFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL 177

[Close]

BLAST of CmaCh04G009060.1 vs. ExPASy TrEMBL
Match: A0A6J1IKH3 (uncharacterized protein LOC111477886 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111477886 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 3.7e-86
Identity = 170/177 (96.05%), Postives = 170/177 (96.05%), Query Frame = 0


Query: 1   MATVLGSLALPSSSVLASTTFSGRRTSLVLPRYRALKIGHSFTSHSVKSARSNARFTHRS 60
           MATVLGSLALPSSSVLASTTFSGRRTSLVLPRYRALKIGHSFTSHSVKSARSNARFTHRS
Sbjct: 1   MATVLGSLALPSSSVLASTTFSGRRTSLVLPRYRALKIGHSFTSHSVKSARSNARFTHRS 60

Query: 61  DRVVCDGQETSSIVPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYA 120
           DRVVCD       VPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYA
Sbjct: 61  DRVVCD-------VPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYA 120

Query: 121 GKFKFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL 178
           GKFKFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL
Sbjct: 121 GKFKFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL 170

[Close]

BLAST of CmaCh04G009060.1 vs. ExPASy TrEMBL
Match: A0A6J1FMY5 (uncharacterized protein LOC111446910 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446910 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 4.5e-84
Identity = 163/177 (92.09%), Postives = 169/177 (95.48%), Query Frame = 0


Query: 1   MATVLGSLALPSSSVLASTTFSGRRTSLVLPRYRALKIGHSFTSHSVKSARSNARFTHRS 60
           MATVL SLALPSSSVLASTTFSGRRTSL LPRYRALK+GHSFTSHS+KSARSNARFTHRS
Sbjct: 1   MATVLDSLALPSSSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRS 60

Query: 61  DRVVCDGQETSSIVPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYA 120
            RVVC+GQETSSIVPSASEATWQSQVIES VPVLVEFWAPWCGPCRMIHPVVDELS EYA
Sbjct: 61  GRVVCEGQETSSIVPSASEATWQSQVIESGVPVLVEFWAPWCGPCRMIHPVVDELSDEYA 120

Query: 121 GKFKFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL 178
           GKFKFYKVNTD+EA IAS+ AIRS+PTVIIFKNGEKKEAIIGAV KTTLTDSMDKFL
Sbjct: 121 GKFKFYKVNTDEEAGIASQCAIRSIPTVIIFKNGEKKEAIIGAVPKTTLTDSMDKFL 177

[Close]

BLAST of CmaCh04G009060.1 vs. ExPASy TrEMBL
Match: A0A6J1FSJ8 (uncharacterized protein LOC111446910 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446910 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.2e-78
Identity = 156/177 (88.14%), Postives = 162/177 (91.53%), Query Frame = 0


Query: 1   MATVLGSLALPSSSVLASTTFSGRRTSLVLPRYRALKIGHSFTSHSVKSARSNARFTHRS 60
           MATVL SLALPSSSVLASTTFSGRRTSL LPRYRALK+GHSFTSHS+KSARSNARFTHRS
Sbjct: 1   MATVLDSLALPSSSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRS 60

Query: 61  DRVVCDGQETSSIVPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYA 120
            RVVC+       VPSASEATWQSQVIES VPVLVEFWAPWCGPCRMIHPVVDELS EYA
Sbjct: 61  GRVVCE-------VPSASEATWQSQVIESGVPVLVEFWAPWCGPCRMIHPVVDELSDEYA 120

Query: 121 GKFKFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL 178
           GKFKFYKVNTD+EA IAS+ AIRS+PTVIIFKNGEKKEAIIGAV KTTLTDSMDKFL
Sbjct: 121 GKFKFYKVNTDEEAGIASQCAIRSIPTVIIFKNGEKKEAIIGAVPKTTLTDSMDKFL 170

[Close]

BLAST of CmaCh04G009060.1 vs. ExPASy TrEMBL
Match: A0A6J1J2W9 (uncharacterized protein LOC111482904 OS=Cucurbita maxima OX=3661 GN=LOC111482904 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 6.3e-70
Identity = 133/177 (75.14%), Postives = 155/177 (87.57%), Query Frame = 0


Query: 1   MATVLGSLALPSSSVLASTTFSGRRTSLVLPRYRALKIGHSFTSHSVKSARSNARFTHRS 60
           MATVL SL LP SS LAST FSGRR+S+ LP+YR LKIGHSFTS S++SARSNARF  RS
Sbjct: 1   MATVLDSLTLPCSSALASTAFSGRRSSVALPQYRGLKIGHSFTSQSIRSARSNARFAQRS 60

Query: 61  DRVVCDGQETSSIVPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYA 120
            R+VC+ QET++IVP+ASEATW S V++S +PVLVEFWAPWCGPCRMIHP+VDELSK+YA
Sbjct: 61  GRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYA 120

Query: 121 GKFKFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL 178
           GKFKFYKV+TD  + +ASRY IRS+PTVIIFK+GEKKEAIIGAV K TLT S++KFL
Sbjct: 121 GKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 177

[Close]

BLAST of CmaCh04G009060.1 vs. NCBI nr
Match: XP_022977621.1 (uncharacterized protein LOC111477886 isoform X1 [Cucurbita maxima])

HSP 1 Score: 346.3 bits (887), Expect = 1.6e-91
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MATVLGSLALPSSSVLASTTFSGRRTSLVLPRYRALKIGHSFTSHSVKSARSNARFTHRS 60
           MATVLGSLALPSSSVLASTTFSGRRTSLVLPRYRALKIGHSFTSHSVKSARSNARFTHRS
Sbjct: 1   MATVLGSLALPSSSVLASTTFSGRRTSLVLPRYRALKIGHSFTSHSVKSARSNARFTHRS 60

Query: 61  DRVVCDGQETSSIVPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYA 120
           DRVVCDGQETSSIVPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYA
Sbjct: 61  DRVVCDGQETSSIVPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYA 120

Query: 121 GKFKFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL 178
           GKFKFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL
Sbjct: 121 GKFKFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL 177

[Close]

BLAST of CmaCh04G009060.1 vs. NCBI nr
Match: XP_022977631.1 (uncharacterized protein LOC111477886 isoform X2 [Cucurbita maxima])

HSP 1 Score: 327.4 bits (838), Expect = 7.6e-86
Identity = 170/177 (96.05%), Postives = 170/177 (96.05%), Query Frame = 0


Query: 1   MATVLGSLALPSSSVLASTTFSGRRTSLVLPRYRALKIGHSFTSHSVKSARSNARFTHRS 60
           MATVLGSLALPSSSVLASTTFSGRRTSLVLPRYRALKIGHSFTSHSVKSARSNARFTHRS
Sbjct: 1   MATVLGSLALPSSSVLASTTFSGRRTSLVLPRYRALKIGHSFTSHSVKSARSNARFTHRS 60

Query: 61  DRVVCDGQETSSIVPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYA 120
           DRVVCD       VPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYA
Sbjct: 61  DRVVCD-------VPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYA 120

Query: 121 GKFKFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL 178
           GKFKFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL
Sbjct: 121 GKFKFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL 170

[Close]

BLAST of CmaCh04G009060.1 vs. NCBI nr
Match: XP_022941602.1 (uncharacterized protein LOC111446910 isoform X1 [Cucurbita moschata])

HSP 1 Score: 320.5 bits (820), Expect = 9.3e-84
Identity = 163/177 (92.09%), Postives = 169/177 (95.48%), Query Frame = 0


Query: 1   MATVLGSLALPSSSVLASTTFSGRRTSLVLPRYRALKIGHSFTSHSVKSARSNARFTHRS 60
           MATVL SLALPSSSVLASTTFSGRRTSL LPRYRALK+GHSFTSHS+KSARSNARFTHRS
Sbjct: 1   MATVLDSLALPSSSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRS 60

Query: 61  DRVVCDGQETSSIVPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYA 120
            RVVC+GQETSSIVPSASEATWQSQVIES VPVLVEFWAPWCGPCRMIHPVVDELS EYA
Sbjct: 61  GRVVCEGQETSSIVPSASEATWQSQVIESGVPVLVEFWAPWCGPCRMIHPVVDELSDEYA 120

Query: 121 GKFKFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL 178
           GKFKFYKVNTD+EA IAS+ AIRS+PTVIIFKNGEKKEAIIGAV KTTLTDSMDKFL
Sbjct: 121 GKFKFYKVNTDEEAGIASQCAIRSIPTVIIFKNGEKKEAIIGAVPKTTLTDSMDKFL 177

[Close]

BLAST of CmaCh04G009060.1 vs. NCBI nr
Match: KAG7031370.1 (Thioredoxin M4, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 319.3 bits (817), Expect = 2.1e-83
Identity = 162/177 (91.53%), Postives = 169/177 (95.48%), Query Frame = 0


Query: 1   MATVLGSLALPSSSVLASTTFSGRRTSLVLPRYRALKIGHSFTSHSVKSARSNARFTHRS 60
           MATVL SLALPSSSVLASTTFSGRRTSL LPRYRALK+GHSFTSHS+KSARSNARFTHRS
Sbjct: 1   MATVLDSLALPSSSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRS 60

Query: 61  DRVVCDGQETSSIVPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYA 120
            RVVC+GQETSSIVPSASEATWQSQVIES +PVLVEFWAPWCGPCRMIHPVVDELS EYA
Sbjct: 61  GRVVCEGQETSSIVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIHPVVDELSDEYA 120

Query: 121 GKFKFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL 178
           GKFKFYKVNTD+EA IAS+ AIRS+PTVIIFKNGEKKEAIIGAV KTTLTDSMDKFL
Sbjct: 121 GKFKFYKVNTDEEAGIASQCAIRSIPTVIIFKNGEKKEAIIGAVPKTTLTDSMDKFL 177

[Close]

BLAST of CmaCh04G009060.1 vs. NCBI nr
Match: XP_023539212.1 (uncharacterized protein LOC111799921 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 316.2 bits (809), Expect = 1.8e-82
Identity = 160/177 (90.40%), Postives = 168/177 (94.92%), Query Frame = 0


Query: 1   MATVLGSLALPSSSVLASTTFSGRRTSLVLPRYRALKIGHSFTSHSVKSARSNARFTHRS 60
           MATVL SLALPSSSVLASTTFSGRRTSL LPRYRALK+GHSFTSHS+KSARSNARFTHRS
Sbjct: 1   MATVLDSLALPSSSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRS 60

Query: 61  DRVVCDGQETSSIVPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYA 120
            RVVC+GQETSSIVPSASEATWQSQVIES +PVLVEFWAPWCGPCRMIHPVVDELS+EYA
Sbjct: 61  GRVVCEGQETSSIVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIHPVVDELSEEYA 120

Query: 121 GKFKFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL 178
           GKFKFYKVNTD+EA IAS+ AIRS+PT IIFKNGEKKEAIIGAV KTTLTD MDKFL
Sbjct: 121 GKFKFYKVNTDEEAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPKTTLTDIMDKFL 177

[Close]

BLAST of CmaCh04G009060.1 vs. TAIR 10
Match: AT3G15360.1 (thioredoxin M-type 4 )

HSP 1 Score: 174.1 bits (440), Expect = 1.0e-43
Identity = 88/174 (50.57%), Postives = 120/174 (68.97%), Query Frame = 0


Query: 8   LALPSSSVLASTTFSGRRTSLV-LPRYRALKIGHSFTSHSVKSARSNARFTHRSDRVVCD 67
           +A   SS  A+ + S RR S      +R LK   S  + S     +      R  R+ C+
Sbjct: 18  IAASVSSSSAAPSVSRRRISPARFLEFRGLKSSRSLVTQSASLGANRRTRIARGGRIACE 77

Query: 68  GQETSSI---VPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYAGKF 127
            Q+T++    VP+ S++ WQ++V+ES VPVLVEFWAPWCGPCRMIHP+VD+L+K++AGKF
Sbjct: 78  AQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKF 137

Query: 128 KFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL 178
           KFYK+NTD+    A+RY IRSVPTVIIFK GEKK++IIGAV + TL  ++++FL
Sbjct: 138 KFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPRETLEKTIERFL 191

[Close]

BLAST of CmaCh04G009060.1 vs. TAIR 10
Match: AT1G03680.1 (thioredoxin M-type 1 )

HSP 1 Score: 159.1 bits (401), Expect = 3.3e-39
Identity = 74/158 (46.84%), Postives = 111/158 (70.25%), Query Frame = 0


Query: 20  TFSGRRTSLVLPRYRALKIGHSFTSHSVKSARSNARFTHRSDRVVCDGQETSSIVPSASE 79
           +FS R+   VLP    L+     T  S+ S   N+R +     V+C+ Q+T++ +P  ++
Sbjct: 27  SFSTRQMFSVLPESSGLR-----TRVSLSSLSKNSRVSRLRRGVICEAQDTATGIPVVND 86

Query: 80  ATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYAGKFKFYKVNTDQEAEIASR 139
           +TW S V+++  PV V+FWAPWCGPC+MI P+V+EL+++YAG+FKFYK+NTD+      +
Sbjct: 87  STWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATPGQ 146

Query: 140 YAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL 178
           Y +RS+PT++IF NGEKK+ IIGAV+K TL  S++KFL
Sbjct: 147 YGVRSIPTIMIFVNGEKKDTIIGAVSKDTLATSINKFL 179

[Close]

BLAST of CmaCh04G009060.1 vs. TAIR 10
Match: AT4G03520.1 (Thioredoxin superfamily protein )

HSP 1 Score: 158.7 bits (400), Expect = 4.4e-39
Identity = 77/165 (46.67%), Postives = 112/165 (67.88%), Query Frame = 0


Query: 13  SSVLASTTFSGRRTSLVLPRYRALKIGHSFTSHSVKSARSNARFTHRSDRVVCDGQETSS 72
           SS  ++++ S RR   VLP    L+I  S +  S+ S     R +     VVC+ QET++
Sbjct: 22  SSSPSASSLSSRRMFAVLPESSGLRIRLSLSPASLTSIH-QPRVSRLRRAVVCEAQETTT 81

Query: 73  IVPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYAGKFKFYKVNTDQ 132
            +   +++TW S V+++  PV+V+FWAPWCGPC+MI P+V++L++ Y GK KFYK+NTD+
Sbjct: 82  DIQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDE 141

Query: 133 EAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL 178
                 +Y +RS+PT++IF  GEKK+ IIGAV KTTLT S+DKFL
Sbjct: 142 SPNTPGQYGVRSIPTIMIFVGGEKKDTIIGAVPKTTLTSSLDKFL 185

[Close]

BLAST of CmaCh04G009060.1 vs. TAIR 10
Match: AT2G15570.1 (Thioredoxin superfamily protein )

HSP 1 Score: 111.7 bits (278), Expect = 6.1e-25
Identity = 43/100 (43.00%), Postives = 71/100 (71.00%), Query Frame = 0


Query: 78  SEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYAGKFKFYKVNTDQEAEIA 137
           ++ +W+  V++S  PVLVEF+  WCGPCRM+H ++DE++ +YAGK   Y +N D +  +A
Sbjct: 72  TQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLPVA 131

Query: 138 SRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL 178
             Y I++VP V++FKNGEK+E+I+G + K     ++++ L
Sbjct: 132 EEYEIKAVPVVLLFKNGEKRESIMGTMPKEFYISAIERVL 171

[Close]

BLAST of CmaCh04G009060.1 vs. TAIR 10
Match: AT2G15570.2 (Thioredoxin superfamily protein )

HSP 1 Score: 111.7 bits (278), Expect = 6.1e-25
Identity = 44/107 (41.12%), Postives = 72/107 (67.29%), Query Frame = 0


Query: 71  SSIVPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYAGKFKFYKVNT 130
           S      ++ +W+  V++S  PVLVEF+  WCGPCRM+H ++DE++ +YAGK   Y +N 
Sbjct: 66  SRAAAEVTQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNA 125

Query: 131 DQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL 178
           D +  +A  Y I++VP V++FKNGEK+E+I+G + K     ++++ L
Sbjct: 126 DNDLPVAEEYEIKAVPVVLLFKNGEKRESIMGTMPKEFYISAIERVL 172

The following BLAST results are available for this feature:

BLAST of CmaCh04G009060.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SEU6	1.4e-42	50.57	Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g15360 PE=2 ...	[more]
Q7X8R5	1.6e-38	49.46	Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0...	[more]
P07591	2.1e-38	52.70	Thioredoxin M-type, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=2	[more]
O48737	4.7e-38	46.84	Thioredoxin M1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g03680 PE=1 ...	[more]
Q9SEU8	6.1e-38	46.67	Thioredoxin M2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TRXM2 PE=1 SV=2	[more]

BLAST of CmaCh04G009060.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IKG3	7.7e-92	100.00	uncharacterized protein LOC111477886 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1IKH3	3.7e-86	96.05	uncharacterized protein LOC111477886 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1FMY5	4.5e-84	92.09	uncharacterized protein LOC111446910 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FSJ8	2.2e-78	88.14	uncharacterized protein LOC111446910 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1J2W9	6.3e-70	75.14	uncharacterized protein LOC111482904 OS=Cucurbita maxima OX=3661 GN=LOC111482904...	[more]

BLAST of CmaCh04G009060.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022977621.1	1.6e-91	100.00	uncharacterized protein LOC111477886 isoform X1 [Cucurbita maxima]	[more]
XP_022977631.1	7.6e-86	96.05	uncharacterized protein LOC111477886 isoform X2 [Cucurbita maxima]	[more]
XP_022941602.1	9.3e-84	92.09	uncharacterized protein LOC111446910 isoform X1 [Cucurbita moschata]	[more]
KAG7031370.1	2.1e-83	91.53	Thioredoxin M4, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosper...	[more]
XP_023539212.1	1.8e-82	90.40	uncharacterized protein LOC111799921 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh04G009060.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15360.1	1.0e-43	50.57	thioredoxin M-type 4	[more]
AT1G03680.1	3.3e-39	46.84	thioredoxin M-type 1	[more]
AT4G03520.1	4.4e-39	46.67	Thioredoxin superfamily protein	[more]
AT2G15570.1	6.1e-25	43.00	Thioredoxin superfamily protein	[more]
AT2G15570.2	6.1e-25	41.12	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 141..152 score: 37.36 coord: 93..101 score: 64.57 coord: 101..110 score: 61.5
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 74..177 e-value: 8.9E-36 score: 124.2
None	No IPR available	PANTHER	PTHR45663:SF24	THIOREDOXIN-1-LIKE	coord: 9..177
None	No IPR available	PANTHER	PTHR45663	GEO12009P1	coord: 9..177
None	No IPR available	CDD	cd02947	TRX_family	coord: 80..174 e-value: 2.78791E-39 score: 127.289
IPR005746	Thioredoxin	TIGRFAM	TIGR01068	TIGR01068	coord: 78..176 e-value: 5.8E-36 score: 120.7
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 77..174 e-value: 6.5E-31 score: 106.4
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 68..177 score: 14.348388
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 94..112
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 74..176

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh04G009060	CmaCh04G009060	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh04G009060.1:exon:428	CmaCh04G009060.1:exon:428	exon
CmaCh04G009060.1:exon:429	CmaCh04G009060.1:exon:429	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh04G009060.1:five_prime_utr	CmaCh04G009060.1:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh04G009060.1:cds	CmaCh04G009060.1:cds	CDS
CmaCh04G009060.1:cds	CmaCh04G009060.1:cds_2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh04G009060.1:three_prime_utr	CmaCh04G009060.1:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh04G009060.1	CmaCh04G009060.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006662	glycerol ether metabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0015035	protein-disulfide reductase activity
molecular_function	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor