
CmaCh03G013240.1 (mRNA) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCCATAGTTCAAAAATTGTACGATGCTTGCAAGGCATCATTTTCTACCAGTGTTCCGGTGTCAGAAGAGGCTCTGCAGAAGGTCATTACTCTCTTAGGTGTGTGCAAATAAGTAATTCGCTTATTTTCTTGATAAGTCTTTTTCGTACAAAATTTCACTCAATAAGCTGTTTTTTTAGGATGCATCGCGTATCTTTATGAGTTTGTACAATTCTGTTTCAGATGAACTGAAGCCATCTAATGTGGGTCTCGAACGAGAGTCGCAGTTAGCTCGTGGTTGGAAAGGTTCACTGAATGTTACTAATGGGAAGAAAGGTCGAAAGGGCGCACACCAATATCCACCAACTATACAATATCTACACTTGCATGAATGTGATAGATTCTCGGTAAATGATCGCATTGATATGTTAACTTCTGGTTATTCCCCACCCCCTGCTCCATTAGTGCCATCTCTCGAAGGAACTATTTCTCGTTGTGTGCAGATCGGAATCTTTTGCATGCCTCCAGGTTCTATCATTCCACTTCATAATCATCCTGGAATGACTGTATTGAGCAAGCTTCTATATGGTGCATTACATGTACGATCATATGATTGGCTTGATCTGCCTGAGTTCATAGATCTGTCTCAAGGTATTTCTTTCTCATCCATGGAACCCACCTCAAGCTTGATAGAAGCCCAGTTCTAGTTTTTTGTGAGATCAGAAAATTAAGAATTTATTAGTGCTTATGTAATGAATTGTGAAGCAGTGCTATTATTATTGATTTTTTGATTAGAGACAATTTCATTGATAATTGAAATTTACGATGTTTATAAAGGACCTTCCCAATTTACCATGAGTGAATGTATAACTATAGAAGTAGAAATATTAGACGGTTTACACCTAGATATAGCTTGGTAAATAACATTGTCGAAGAATTTTGTATAAGTCTCGTGTCTTTTTTGCAAGTATTCTTTGATTTCTTTCTTTCCAAATATTCCAAAAGAAAGTCATGATGAGGTTTGTCCATAGTAGGGCTTTTGCATTCTTGAAAGTGTGGTACGTTAAGGCCATGTCCAATAGATCTTTTACCTCCCTTGGAAATGTGAGATGTCATTCGAATATATTGGGAATTGTTGTCCAGAAATTCTGAGTGTATATGCATTGCATAAATAAATAGTTTTGTGATTTGTTTTCTTTTTTTTTTTTCTTTTTTTTTTTTGTTTTTGCATAATGGACACCAATTTGGAAATAGAGTTATGTAGGCTATTGTTTTTTTTTAAAGATTTTCACTTGTGCTAATGGCTTTATGCATATTTCTCAAATGAAGAATTTCACCTTTTTTAGGTGATGAACTTTCCATACTGTCTTTCCTAGCGCTATTTCCCAAGTAGTAGCTTGTCTTAGCATTTATAATGCAATTGTACTTTTCAATTCAATACGGTCCTATCTGGCATTATTAGTTCTCTGTTTTGACTGTTTACTTCATTTGTGAAAAGTTGATACTAACGTTTTCCTTTAATCCCCTGGATGACAATGATGCTTTCCTTTCTGAAAACAAACGTTTTTGGAAATGGCAGACGGCAATATCCACCAACTATAAAATATCTACACTTGCATGAATGTCACAGATTTTCAGCTGGCGAGGTTCCTCTAGTCCACGGATCATTGTGGATCTGTTTCTAGAGGCGTTACTTGCTCCTGAAAAGCTACTCTCATGATCATGCAACTATTTTAAAACGAGTGCCCCCATCAATATTAGACTTTGTGTATAGTGAATACTCTCAGGTTCAAAAGAATGGGATCGAGTAGCTTGTAGGTGAAATGTCGGCTGCTGGGCTCATCCTGCTTAGTTGGGGTCTGTTTCCAACAGTCATAATAGTTCAAATGGAGGGTCTGTTTCCAACAGAGTCTTAATAGTTAAAAAGAAGCGTCTATTTCTAACAGTCTTATTAGTTAAAAGGAGCTTATGGCTATTTTGATGGGGGTACAGAAGTGGAGATCTTACCTTTTTTTGGCTAGAACATTCATAATTCATTCCTACGAGAAAAGCTCACATGACTGGTTGTTGCAGTAATTAGTCAGAATGGAACATCAAAGGTGGCTTAGTAATTTTGGTGAGTAAGGATCTATGTGTTGAATGATCTCAAGTTTCAAGAAAGAGCGTAAGAAATCATGAATAGCGATCTGATAATAACATAAGGGGTGTGAAATTGAAGTTGGGAATTTTGGTCTACTTGAAGAACTTTGGTCTACTGAACTTCAATAGAAATCACCGGTAGTTATATGAAAGGAAAAGTTTACTCCTGTTATTACAACCCGAACTGATTACTCAAAAACAGTCGGTAAGGTGTCTTATCACTTGGTTTTTCTCTGCCTTCCACCATGAATATCCACCATGCTTTTCACGTGTCCTAGCAGAAATTGTAAGAAGGATCCACTTTCTGTCTTGTGACCTCAACTCAGGGCTAGCTACCTTCGAGCTTGACACCCTTTAGCAATTCTGGGAGAGTGCATTTCGGCTAAAAGACCCTGATGGAGCTGCAAGTTTTTGTTTAGCGCCAAGGCTAGTTAGTAGAGGAAGTTTAGTGGGAACCTTATATATCATCATAGCACAACGCTTTCCATCTTTTTACCCTGAGGACAAGGTAAAAGCTTGGGCAGGAAGTAATTTTAGGAGACATATCCTCCCATACGTTTTATGTATGGTAGGAGGGAGGCATGAGGTAAAGTGCATAAAGCGAGTTGTTAAAGGGAATATTTGGTGATTTGGGAGGGTGAAGGGTAGCTACTCAGACATCCCGAATATATATCCTTCCATACATTTTATGTATGGTAGAATTTCATGCAATTGTCTGCATTGTTTATCGTAATTGTTTTTGCTCTAAACATCTGCCCTGGGAAGAAAGAAAGAAATTGCTTGAGTTGAATCTTTTCCTCATTCCGTGAATAGCATTTGATGTAGTGATATATTTGAAATGATCCATTTTTGGGACGAATGTGAAACCGTTATTTTTTCCGGGCTTGGTTATTTTGTTCACTTTCCTTTCTTTGAGTAAAAGTTTCAGTATAAAATTTTATTTGAGTTGTATCCTCAGCCAGACCTGCAAAACTAGTTAGGGACTGTGAGATGATTGCACCTTGTGGAACTACAATTCTTTATCCAGATCGAGGTGGCAACATTCATCATTTCAAAGCCATAACTCCCTGCGCAATCTTCGACATTCTTTCACCGCCTTACTCGTCTGCAGATGGGCGACACTGCTCTTATTTCCGGAGGTCACCTAGGCGAGAGATTTCAGGTATCGTTTGTTTCCTCTGGATTTCTTTCTTGCTTCTACTTCTACACTGCTCTTATCTCCGCTCTCTTCCAATTCAAAGGTCTTGACCAACTGTGTGGAACTGAAACCGGTCCCTCAGAAGTTACTTGGTTGGACGAGATTCAGCCACCTGAAAACTTCGTGGTCCGGCGGGGCCTGTACAAAGGCCCCATTATTAGACAATGGAGTTAATACTGTAGAGCATCATTTAGTGGGATTGGCTCGAAAAATCAACGAACCATCCAGTTAAACTACACCAGCGATTCTTAACTGGTTCAATAATTGTATGTTAAGAATACTGAGGAGGGAGTCTTCTTCGATGTAATTGAATTGTATAATTGAAAGTTAAGAAAAAGACTGAATAATAAATGAAAAATGTCTGTGGTAGAAGATTGTAACGCTGGATTTGACTTTGATATCAATCAATTAATGTGATTAAATTTGAATTGCA ATGCCCATAGTTCAAAAATTGTACGATGCTTGCAAGGCATCATTTTCTACCAGTGTTCCGGTGTCAGAAGAGGCTCTGCAGAAGGTCATTACTCTCTTAGATGAACTGAAGCCATCTAATGTGGGTCTCGAACGAGAGTCGCAGTTAGCTCGTGGTTGGAAAGGTTCACTGAATGTTACTAATGGGAAGAAAGGTCGAAAGGGCGCACACCAATATCCACCAACTATACAATATCTACACTTGCATGAATGTGATAGATTCTCGGTAAATGATCGCATTGATATGTTAACTTCTGGTTATTCCCCACCCCCTGCTCCATTAGTGCCATCTCTCGAAGGAACTATTTCTCGTTGTGTGCAGATCGGAATCTTTTGCATGCCTCCAGGTTCTATCATTCCACTTCATAATCATCCTGGAATGACTGTATTGAGCAAGCTTCTATATGGTGCATTACATGTACGATCATATGATTGGCTTGATCTGCCTGAGTTCATAGATCTGTCTCAAGATCGAGGTGGCAACATTCATCATTTCAAAGCCATAACTCCCTGCGCAATCTTCGACATTCTTTCACCGCCTTACTCGTCTGCAGATGGGCGACACTGCTCTTATTTCCGGAGGTCACCTAGGCGAGAGATTTCAGGTCTTGACCAACTGTGTGGAACTGAAACCGGTCCCTCAGAAGTTACTTGGTTGGACGAGATTCAGCCACCTGAAAACTTCGTGGTCCGGCGGGGCCTGTACAAAGGCCCCATTATTAGACAATGGAGTTAATACTGTAGAGCATCATTTAGTGGGATTGGCTCGAAAAATCAACGAACCATCCAGTTAAACTACACCAGCGATTCTTAACTGGTTCAATAATTGTATGTTAAGAATACTGAGGAGGGAGTCTTCTTCGATGTAATTGAATTGTATAATTGAAAGTTAAGAAAAAGACTGAATAATAAATGAAAAATGTCTGTGGTAGAAGATTGTAACGCTGGATTTGACTTTGATATCAATCAATTAATGTGATTAAATTTGAATTGCA ATGCCCATAGTTCAAAAATTGTACGATGCTTGCAAGGCATCATTTTCTACCAGTGTTCCGGTGTCAGAAGAGGCTCTGCAGAAGGTCATTACTCTCTTAGATGAACTGAAGCCATCTAATGTGGGTCTCGAACGAGAGTCGCAGTTAGCTCGTGGTTGGAAAGGTTCACTGAATGTTACTAATGGGAAGAAAGGTCGAAAGGGCGCACACCAATATCCACCAACTATACAATATCTACACTTGCATGAATGTGATAGATTCTCGGTAAATGATCGCATTGATATGTTAACTTCTGGTTATTCCCCACCCCCTGCTCCATTAGTGCCATCTCTCGAAGGAACTATTTCTCGTTGTGTGCAGATCGGAATCTTTTGCATGCCTCCAGGTTCTATCATTCCACTTCATAATCATCCTGGAATGACTGTATTGAGCAAGCTTCTATATGGTGCATTACATGTACGATCATATGATTGGCTTGATCTGCCTGAGTTCATAGATCTGTCTCAAGATCGAGGTGGCAACATTCATCATTTCAAAGCCATAACTCCCTGCGCAATCTTCGACATTCTTTCACCGCCTTACTCGTCTGCAGATGGGCGACACTGCTCTTATTTCCGGAGGTCACCTAGGCGAGAGATTTCAGGTCTTGACCAACTGTGTGGAACTGAAACCGGTCCCTCAGAAGTTACTTGGTTGGACGAGATTCAGCCACCTGAAAACTTCGTGGTCCGGCGGGGCCTGTACAAAGGCCCCATTATTAGACAATGGAGTTAA MPIVQKLYDACKASFSTSVPVSEEALQKVITLLDELKPSNVGLERESQLARGWKGSLNVTNGKKGRKGAHQYPPTIQYLHLHECDRFSVNDRIDMLTSGYSPPPAPLVPSLEGTISRCVQIGIFCMPPGSIIPLHNHPGMTVLSKLLYGALHVRSYDWLDLPEFIDLSQDRGGNIHHFKAITPCAIFDILSPPYSSADGRHCSYFRRSPRREISGLDQLCGTETGPSEVTWLDEIQPPENFVVRRGLYKGPIIRQWS Homology
BLAST of CmaCh03G013240.1 vs. ExPASy Swiss-Prot
Match: Q9LXT4 (Plant cysteine oxidase 5 OS=Arabidopsis thaliana OX=3702 GN=PCO5 PE=1 SV=1) HSP 1 Score: 250.4 bits (638), Expect = 2.2e-65 Identity = 135/277 (48.74%), Postives = 165/277 (59.57%), Query Frame = 0
BLAST of CmaCh03G013240.1 vs. ExPASy Swiss-Prot
Match: Q9SJI9 (Plant cysteine oxidase 4 OS=Arabidopsis thaliana OX=3702 GN=PCO4 PE=1 SV=2) HSP 1 Score: 249.6 bits (636), Expect = 3.8e-65 Identity = 132/275 (48.00%), Postives = 172/275 (62.55%), Query Frame = 0
BLAST of CmaCh03G013240.1 vs. ExPASy Swiss-Prot
Match: Q9LXG9 (Plant cysteine oxidase 1 OS=Arabidopsis thaliana OX=3702 GN=PCO1 PE=1 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 1.4e-38 Identity = 96/276 (34.78%), Postives = 133/276 (48.19%), Query Frame = 0
BLAST of CmaCh03G013240.1 vs. ExPASy Swiss-Prot
Match: Q1G3U6 (Plant cysteine oxidase 3 OS=Arabidopsis thaliana OX=3702 GN=PCO3 PE=1 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 3.4e-37 Identity = 98/285 (34.39%), Postives = 136/285 (47.72%), Query Frame = 0
BLAST of CmaCh03G013240.1 vs. ExPASy Swiss-Prot
Match: Q8LGJ5 (Plant cysteine oxidase 2 OS=Arabidopsis thaliana OX=3702 GN=PCO2 PE=1 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 4.6e-34 Identity = 95/279 (34.05%), Postives = 132/279 (47.31%), Query Frame = 0
BLAST of CmaCh03G013240.1 vs. ExPASy TrEMBL
Match: A0A6J1IUW9 (Cysteine dioxygenase OS=Cucurbita maxima OX=3661 GN=LOC111478613 PE=3 SV=1) HSP 1 Score: 451.1 bits (1159), Expect = 3.2e-123 Identity = 225/280 (80.36%), Postives = 225/280 (80.36%), Query Frame = 0
BLAST of CmaCh03G013240.1 vs. ExPASy TrEMBL
Match: A0A6J1EDM8 (Cysteine dioxygenase OS=Cucurbita moschata OX=3662 GN=LOC111433333 PE=3 SV=1) HSP 1 Score: 440.3 bits (1131), Expect = 5.7e-120 Identity = 219/280 (78.21%), Postives = 221/280 (78.93%), Query Frame = 0
BLAST of CmaCh03G013240.1 vs. ExPASy TrEMBL
Match: A0A6J1CMJ3 (Cysteine dioxygenase OS=Momordica charantia OX=3673 GN=LOC111012346 PE=3 SV=1) HSP 1 Score: 391.0 bits (1003), Expect = 3.9e-105 Identity = 197/280 (70.36%), Postives = 207/280 (73.93%), Query Frame = 0
BLAST of CmaCh03G013240.1 vs. ExPASy TrEMBL
Match: A0A5B6ZY62 (Cysteine dioxygenase OS=Davidia involucrata OX=16924 GN=Din_017827 PE=3 SV=1) HSP 1 Score: 353.2 bits (905), Expect = 9.1e-94 Identity = 176/278 (63.31%), Postives = 199/278 (71.58%), Query Frame = 0
BLAST of CmaCh03G013240.1 vs. ExPASy TrEMBL
Match: A0A6P5SDS9 (Cysteine dioxygenase OS=Prunus avium OX=42229 GN=LOC110755144 PE=3 SV=1) HSP 1 Score: 349.0 bits (894), Expect = 1.7e-92 Identity = 171/278 (61.51%), Postives = 199/278 (71.58%), Query Frame = 0
BLAST of CmaCh03G013240.1 vs. NCBI nr
Match: XP_022978749.1 (plant cysteine oxidase 4-like [Cucurbita maxima]) HSP 1 Score: 451.1 bits (1159), Expect = 6.6e-123 Identity = 225/280 (80.36%), Postives = 225/280 (80.36%), Query Frame = 0
BLAST of CmaCh03G013240.1 vs. NCBI nr
Match: XP_022926131.1 (plant cysteine oxidase 4-like [Cucurbita moschata] >XP_022926132.1 plant cysteine oxidase 4-like [Cucurbita moschata]) HSP 1 Score: 440.3 bits (1131), Expect = 1.2e-119 Identity = 219/280 (78.21%), Postives = 221/280 (78.93%), Query Frame = 0
BLAST of CmaCh03G013240.1 vs. NCBI nr
Match: KAG7034648.1 (Plant cysteine oxidase 4 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 437.2 bits (1123), Expect = 9.9e-119 Identity = 218/280 (77.86%), Postives = 219/280 (78.21%), Query Frame = 0
BLAST of CmaCh03G013240.1 vs. NCBI nr
Match: XP_023543202.1 (plant cysteine oxidase 4-like [Cucurbita pepo subsp. pepo] >XP_023543203.1 plant cysteine oxidase 4-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 436.8 bits (1122), Expect = 1.3e-118 Identity = 219/280 (78.21%), Postives = 220/280 (78.57%), Query Frame = 0
BLAST of CmaCh03G013240.1 vs. NCBI nr
Match: XP_022142152.1 (plant cysteine oxidase 4-like isoform X1 [Momordica charantia] >XP_022142153.1 plant cysteine oxidase 4-like isoform X1 [Momordica charantia] >XP_022142155.1 plant cysteine oxidase 4-like isoform X1 [Momordica charantia] >XP_022142156.1 plant cysteine oxidase 4-like isoform X1 [Momordica charantia]) HSP 1 Score: 391.0 bits (1003), Expect = 8.1e-105 Identity = 197/280 (70.36%), Postives = 207/280 (73.93%), Query Frame = 0
BLAST of CmaCh03G013240.1 vs. TAIR 10
Match: AT3G58670.1 (Protein of unknown function (DUF1637) ) HSP 1 Score: 250.4 bits (638), Expect = 1.6e-66 Identity = 135/277 (48.74%), Postives = 165/277 (59.57%), Query Frame = 0
BLAST of CmaCh03G013240.1 vs. TAIR 10
Match: AT3G58670.2 (Protein of unknown function (DUF1637) ) HSP 1 Score: 250.4 bits (638), Expect = 1.6e-66 Identity = 135/277 (48.74%), Postives = 165/277 (59.57%), Query Frame = 0
BLAST of CmaCh03G013240.1 vs. TAIR 10
Match: AT3G58670.3 (Protein of unknown function (DUF1637) ) HSP 1 Score: 250.4 bits (638), Expect = 1.6e-66 Identity = 135/277 (48.74%), Postives = 165/277 (59.57%), Query Frame = 0
BLAST of CmaCh03G013240.1 vs. TAIR 10
Match: AT2G42670.1 (Protein of unknown function (DUF1637) ) HSP 1 Score: 249.6 bits (636), Expect = 2.7e-66 Identity = 132/275 (48.00%), Postives = 172/275 (62.55%), Query Frame = 0
BLAST of CmaCh03G013240.1 vs. TAIR 10
Match: AT2G42670.2 (Protein of unknown function (DUF1637) ) HSP 1 Score: 248.4 bits (633), Expect = 6.1e-66 Identity = 131/276 (47.46%), Postives = 172/276 (62.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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