CmaCh03G007590.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G007590.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Anti-muellerian hormone type-2 receptor
Location	Cma_Chr03: 5959376 .. 5959858 (-)
Sequence length	483
RNA-Seq Expression	CmaCh03G007590.1
Synteny	CmaCh03G007590.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTACTGTCATCATCCTCTTTAGTTCGAGCATTGCCGGTTAATCGTTTGAATTCGTTTTGTAAACCGGCGAATCCACGGACGGCAGTGAAGATTCAGGCCATGGCAAAGGAAGGAAGCGAGAGCGAAGGGGGCATTGCAGAGACGTTGGCAATAGCCGGGGGGTTAGTGGCGACCCCAGTGATCGGTTGGTCGCTGTACACCCTGAAAACAACCGGGTGCGGGCTGCCGCCGGGGCCAGGCGGGTCACTCGGCGCATTGGAAGGCGTCAGCTACTTGGCGGTGGTGGGCATCGTGGGTTGGTCGGTATACACGAAGACGAAAACTGGATCTGGCCTGCCCAACGGCCCTTTTGGGCTTTTGGGCGCGGTGGAAGGTCTGTCGTACTTGAGTTTATTGGCTATCTTGGTCGTTTTTGGGTTGCAGTACTTCGAACAGGGGTACATCCCCGGCCCTCTTCCGGCTGCTCAGTGCTTTGGTTGA

mRNA sequence

ATGCTACTGTCATCATCCTCTTTAGTTCGAGCATTGCCGGTTAATCGTTTGAATTCGTTTTGTAAACCGGCGAATCCACGGACGGCAGTGAAGATTCAGGCCATGGCAAAGGAAGGAAGCGAGAGCGAAGGGGGCATTGCAGAGACGTTGGCAATAGCCGGGGGGTTAGTGGCGACCCCAGTGATCGGTTGGTCGCTGTACACCCTGAAAACAACCGGGTGCGGGCTGCCGCCGGGGCCAGGCGGGTCACTCGGCGCATTGGAAGGCGTCAGCTACTTGGCGGTGGTGGGCATCGTGGGTTGGTCGGTATACACGAAGACGAAAACTGGATCTGGCCTGCCCAACGGCCCTTTTGGGCTTTTGGGCGCGGTGGAAGGTCTGTCGTACTTGAGTTTATTGGCTATCTTGGTCGTTTTTGGGTTGCAGTACTTCGAACAGGGGTACATCCCCGGCCCTCTTCCGGCTGCTCAGTGCTTTGGTTGA

Coding sequence (CDS)

ATGCTACTGTCATCATCCTCTTTAGTTCGAGCATTGCCGGTTAATCGTTTGAATTCGTTTTGTAAACCGGCGAATCCACGGACGGCAGTGAAGATTCAGGCCATGGCAAAGGAAGGAAGCGAGAGCGAAGGGGGCATTGCAGAGACGTTGGCAATAGCCGGGGGGTTAGTGGCGACCCCAGTGATCGGTTGGTCGCTGTACACCCTGAAAACAACCGGGTGCGGGCTGCCGCCGGGGCCAGGCGGGTCACTCGGCGCATTGGAAGGCGTCAGCTACTTGGCGGTGGTGGGCATCGTGGGTTGGTCGGTATACACGAAGACGAAAACTGGATCTGGCCTGCCCAACGGCCCTTTTGGGCTTTTGGGCGCGGTGGAAGGTCTGTCGTACTTGAGTTTATTGGCTATCTTGGTCGTTTTTGGGTTGCAGTACTTCGAACAGGGGTACATCCCCGGCCCTCTTCCGGCTGCTCAGTGCTTTGGTTGA

Protein sequence

MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATPVIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSVYTKTKTGSGLPNGPFGLLGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPAAQCFG

Homology

[Close]

BLAST of CmaCh03G007590.1 vs. ExPASy TrEMBL
Match: A0A6J1IN27 (uncharacterized protein LOC111478511 OS=Cucurbita maxima OX=3661 GN=LOC111478511 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.7e-82
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP 60
           MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP
Sbjct: 1   MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP 60

Query: 61  VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSVYTKTKTGSGLPNGPFGL 120
           VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSVYTKTKTGSGLPNGPFGL
Sbjct: 61  VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSVYTKTKTGSGLPNGPFGL 120

Query: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPAAQCFG 161
           LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPAAQCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPAAQCFG 160

[Close]

BLAST of CmaCh03G007590.1 vs. ExPASy TrEMBL
Match: A0A6J1GEW2 (uncharacterized protein LOC111453326 OS=Cucurbita moschata OX=3662 GN=LOC111453326 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.5e-81
Identity = 158/160 (98.75%), Postives = 158/160 (98.75%), Query Frame = 0


Query: 1   MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP 60
           MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP
Sbjct: 1   MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP 60

Query: 61  VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSVYTKTKTGSGLPNGPFGL 120
           VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWS YTKTKTGSGLPNGPFGL
Sbjct: 61  VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSAYTKTKTGSGLPNGPFGL 120

Query: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPAAQCFG 161
           LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPA QCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 160

[Close]

BLAST of CmaCh03G007590.1 vs. ExPASy TrEMBL
Match: A0A5A7T239 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002180 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 8.2e-77
Identity = 149/160 (93.12%), Postives = 154/160 (96.25%), Query Frame = 0


Query: 1   MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP 60
           MLLSSSSL+R+LPV R N  CKPANPRT VK+QAMAKEGSESEGGIAET+AIAGGLVATP
Sbjct: 1   MLLSSSSLLRSLPVTRQNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP 60

Query: 61  VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSVYTKTKTGSGLPNGPFGL 120
           VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWS+YTKTKTGSGLPNGPFGL
Sbjct: 61  VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120

Query: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPAAQCFG 161
           LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPA QCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 160

[Close]

BLAST of CmaCh03G007590.1 vs. ExPASy TrEMBL
Match: A0A1S3B1A0 (uncharacterized protein LOC103485040 OS=Cucumis melo OX=3656 GN=LOC103485040 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 8.2e-77
Identity = 149/160 (93.12%), Postives = 154/160 (96.25%), Query Frame = 0


Query: 1   MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP 60
           MLLSSSSL+R+LPV R N  CKPANPRT VK+QAMAKEGSESEGGIAET+AIAGGLVATP
Sbjct: 1   MLLSSSSLLRSLPVTRQNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP 60

Query: 61  VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSVYTKTKTGSGLPNGPFGL 120
           VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWS+YTKTKTGSGLPNGPFGL
Sbjct: 61  VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120

Query: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPAAQCFG 161
           LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPA QCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 160

[Close]

BLAST of CmaCh03G007590.1 vs. ExPASy TrEMBL
Match: A0A0A0KKC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502600 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 7.0e-76
Identity = 147/160 (91.88%), Postives = 154/160 (96.25%), Query Frame = 0


Query: 1   MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP 60
           MLLSSSSL+++LPVNR N  CKPANPRT VK+QAMAKEGSESEGGIAET+AIAGGLVATP
Sbjct: 1   MLLSSSSLLQSLPVNRPNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP 60

Query: 61  VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSVYTKTKTGSGLPNGPFGL 120
           VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWS+YTKTKTGSGLPNGPFGL
Sbjct: 61  VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120

Query: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPAAQCFG 161
           LGAVEGLSYLSLLAILVVFGLQY +QGYIPGPLPA QCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYLDQGYIPGPLPADQCFG 160

[Close]

BLAST of CmaCh03G007590.1 vs. NCBI nr
Match: XP_022978571.1 (uncharacterized protein LOC111478511 [Cucurbita maxima])

HSP 1 Score: 315.1 bits (806), Expect = 3.5e-82
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP 60
           MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP
Sbjct: 1   MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP 60

Query: 61  VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSVYTKTKTGSGLPNGPFGL 120
           VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSVYTKTKTGSGLPNGPFGL
Sbjct: 61  VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSVYTKTKTGSGLPNGPFGL 120

Query: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPAAQCFG 161
           LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPAAQCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPAAQCFG 160

[Close]

BLAST of CmaCh03G007590.1 vs. NCBI nr
Match: XP_022950150.1 (uncharacterized protein LOC111453326 [Cucurbita moschata] >XP_023544302.1 uncharacterized protein LOC111803919 [Cucurbita pepo subsp. pepo] >KAG7034154.1 hypothetical protein SDJN02_03881, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 311.2 bits (796), Expect = 5.1e-81
Identity = 158/160 (98.75%), Postives = 158/160 (98.75%), Query Frame = 0


Query: 1   MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP 60
           MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP
Sbjct: 1   MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP 60

Query: 61  VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSVYTKTKTGSGLPNGPFGL 120
           VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWS YTKTKTGSGLPNGPFGL
Sbjct: 61  VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSAYTKTKTGSGLPNGPFGL 120

Query: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPAAQCFG 161
           LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPA QCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 160

[Close]

BLAST of CmaCh03G007590.1 vs. NCBI nr
Match: KAG6603983.1 (hypothetical protein SDJN03_04592, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 309.3 bits (791), Expect = 1.9e-80
Identity = 157/160 (98.12%), Postives = 157/160 (98.12%), Query Frame = 0


Query: 1   MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP 60
           MLLSSSSLVR LPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP
Sbjct: 1   MLLSSSSLVRELPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP 60

Query: 61  VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSVYTKTKTGSGLPNGPFGL 120
           VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWS YTKTKTGSGLPNGPFGL
Sbjct: 61  VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSAYTKTKTGSGLPNGPFGL 120

Query: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPAAQCFG 161
           LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPA QCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 160

[Close]

BLAST of CmaCh03G007590.1 vs. NCBI nr
Match: XP_038882163.1 (uncharacterized protein LOC120073396 [Benincasa hispida])

HSP 1 Score: 300.1 bits (767), Expect = 1.2e-77
Identity = 150/160 (93.75%), Postives = 156/160 (97.50%), Query Frame = 0


Query: 1   MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP 60
           MLLSSSSL+R+LPVNRLN  CKPANPRT VK+QAMAKEGSESEGGIAET+AIAGGLVATP
Sbjct: 1   MLLSSSSLLRSLPVNRLNLACKPANPRTRVKVQAMAKEGSESEGGIAETVAIAGGLVATP 60

Query: 61  VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSVYTKTKTGSGLPNGPFGL 120
           VIGWSLYTLKTTGCGLPPGPGGSLGALEG+SYLAVVGIVGWS+YTKTKTGSGLPNGPFGL
Sbjct: 61  VIGWSLYTLKTTGCGLPPGPGGSLGALEGISYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120

Query: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPAAQCFG 161
           LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPA QCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 160

[Close]

BLAST of CmaCh03G007590.1 vs. NCBI nr
Match: XP_008440700.1 (PREDICTED: uncharacterized protein LOC103485040 [Cucumis melo] >KAA0036236.1 uncharacterized protein E6C27_scaffold18G00340 [Cucumis melo var. makuwa] >TYK12631.1 uncharacterized protein E5676_scaffold255G002180 [Cucumis melo var. makuwa])

HSP 1 Score: 296.2 bits (757), Expect = 1.7e-76
Identity = 149/160 (93.12%), Postives = 154/160 (96.25%), Query Frame = 0


Query: 1   MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP 60
           MLLSSSSL+R+LPV R N  CKPANPRT VK+QAMAKEGSESEGGIAET+AIAGGLVATP
Sbjct: 1   MLLSSSSLLRSLPVTRQNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP 60

Query: 61  VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSVYTKTKTGSGLPNGPFGL 120
           VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWS+YTKTKTGSGLPNGPFGL
Sbjct: 61  VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120

Query: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPAAQCFG 161
           LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPA QCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 160

[Close]

BLAST of CmaCh03G007590.1 vs. TAIR 10
Match: AT3G50685.1 (unknown protein; Has 52 Blast hits to 46 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 206.5 bits (524), Expect = 1.6e-53
Identity = 100/130 (76.92%), Postives = 115/130 (88.46%), Query Frame = 0


Query: 31  KIQAMAKEGSESEGGIAETLAIAGGLVATPVIGWSLYTLKTTGCGLPPGPGGSLGALEGV 90
           ++ A AK+ +++ GG  ET AIAG LV+TPVIGWSLYTLKTTGCGLPPGP G +GALEGV
Sbjct: 30  RVVAKAKDNTDT-GGFLETAAIAGSLVSTPVIGWSLYTLKTTGCGLPPGPAGLIGALEGV 89

Query: 91  SYLAVVGIVGWSVYTKTKTGSGLPNGPFGLLGAVEGLSYLSLLAILVVFGLQYFEQGYIP 150
           SYL VVGIVGWS+YTKTKTGSGLPNGPFGLLGAVEGLSYLS+LAILVVFG+Q+ + G +P
Sbjct: 90  SYLVVVGIVGWSLYTKTKTGSGLPNGPFGLLGAVEGLSYLSVLAILVVFGIQFLDNGSVP 149

Query: 151 GPLPAAQCFG 161
           GPLP+ QCFG
Sbjct: 150 GPLPSDQCFG 158

The following BLAST results are available for this feature:

BLAST of CmaCh03G007590.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh03G007590.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IN27	1.7e-82	100.00	uncharacterized protein LOC111478511 OS=Cucurbita maxima OX=3661 GN=LOC111478511...	[more]
A0A6J1GEW2	2.5e-81	98.75	uncharacterized protein LOC111453326 OS=Cucurbita moschata OX=3662 GN=LOC1114533...	[more]
A0A5A7T239	8.2e-77	93.13	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B1A0	8.2e-77	93.13	uncharacterized protein LOC103485040 OS=Cucumis melo OX=3656 GN=LOC103485040 PE=...	[more]
A0A0A0KKC0	7.0e-76	91.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502600 PE=4 SV=1	[more]

BLAST of CmaCh03G007590.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022978571.1	3.5e-82	100.00	uncharacterized protein LOC111478511 [Cucurbita maxima]	[more]
XP_022950150.1	5.1e-81	98.75	uncharacterized protein LOC111453326 [Cucurbita moschata] >XP_023544302.1 unchar...	[more]
KAG6603983.1	1.9e-80	98.13	hypothetical protein SDJN03_04592, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038882163.1	1.2e-77	93.75	uncharacterized protein LOC120073396 [Benincasa hispida]	[more]
XP_008440700.1	1.7e-76	93.13	PREDICTED: uncharacterized protein LOC103485040 [Cucumis melo] >KAA0036236.1 unc...	[more]

BLAST of CmaCh03G007590.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50685.1	1.6e-53	76.92	unknown protein; Has 52 Blast hits to 46 proteins in 20 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37231	EXPRESSED PROTEIN	coord: 17..160

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh03G007590	CmaCh03G007590	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh03G007590.1:exon:339	CmaCh03G007590.1:exon:339	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh03G007590.1:cds	CmaCh03G007590.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh03G007590.1	CmaCh03G007590.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane