CmaCh03G007010.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G007010.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr03: 5731945 .. 5732540 (-)
Sequence length	498
RNA-Seq Expression	CmaCh03G007010.1
Synteny	CmaCh03G007010.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATTTTATCCGTTCCATCATTGTGTTCTTATGGAGAAAAGTGGATGGCCTGGTCGGGACTGTGGAGAACACTATCTTAAACCAAAAACAAACTGTCAACGGTTAGGGACGGACGGAAAGCCGATGTTCTTAGTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTGTTGGGGGACTAAAAGTGTCCTTTTTACTCAAAAACACGACAAAAGCCAAGCAGGTCCGGGTTTGGTCACGTGGTTCCCAGAGGCGCCCTGTTCGTCCTTGTTCTTCATCCATGTAGCCGTTAATGTCTTGTTGGTTTCTGATCTGTAGTTTATGAGTTTGAAGGCGATGAAGGTGGCAAAACACGACGGCACCAACCCCCAAAGGTTTGATTTTTAATGCTCCTCGTAGACCACCCAATGCAACGCTTCCACTTTTCCCGCTATCCAATTGGTATCCTTTCGGCTCTCTTTTTTTCCTTTTCAAAATTGTAATCTTTTTAGCCCTTTTGAGTAGCTTTCTTTTTGGGTACAGCCTGTCTGAATCTAATCTGCAGTTTTCAGTAAAACATCGTGGCCTCGTGGGTGGGTACTCTTACTCCTTCTGA

mRNA sequence

ATGTCATTTTATCCGTTCCATCATTGTGTTCTTATGGAGAAAAGTGGATGGCCTGGTCGGGACTGTGGAGAACACTATCTTAAACCAAAAACAAACTGTCAACGGTTAGGGACGGACGGAAAGCCGATTGTCCTTTTTACTCAAAAACACGACAAAAGCCAAGCAGGTCCGGGTTTGGTCACGTGGTTCCCAGAGGCGCCCTGTTCGTCCTTGTTCTTCATCCATGTAGCCGTTAATGTCTTGTTGTTTATGAGTTTGAAGGCGATGAAGGTGGCAAAACACGACGGCACCAACCCCCAAAGACCACCCAATGCAACGCTTCCACTTTTCCCGCTATCCAATTGGTATCCTTTCGGCTCTCTTTTTTTCCTTTTCAAAATTGTAATCTTTTTAGCCCTTTTGAGTAGCTTTCTTTTTGGGTACAGCCTGTCTGAATCTAATCTGCAGTTTTCAGTAAAACATCGTGGCCTCGTGGGTGGGTACTCTTACTCCTTCTGA

Coding sequence (CDS)

ATGTCATTTTATCCGTTCCATCATTGTGTTCTTATGGAGAAAAGTGGATGGCCTGGTCGGGACTGTGGAGAACACTATCTTAAACCAAAAACAAACTGTCAACGGTTAGGGACGGACGGAAAGCCGATTGTCCTTTTTACTCAAAAACACGACAAAAGCCAAGCAGGTCCGGGTTTGGTCACGTGGTTCCCAGAGGCGCCCTGTTCGTCCTTGTTCTTCATCCATGTAGCCGTTAATGTCTTGTTGTTTATGAGTTTGAAGGCGATGAAGGTGGCAAAACACGACGGCACCAACCCCCAAAGACCACCCAATGCAACGCTTCCACTTTTCCCGCTATCCAATTGGTATCCTTTCGGCTCTCTTTTTTTCCTTTTCAAAATTGTAATCTTTTTAGCCCTTTTGAGTAGCTTTCTTTTTGGGTACAGCCTGTCTGAATCTAATCTGCAGTTTTCAGTAAAACATCGTGGCCTCGTGGGTGGGTACTCTTACTCCTTCTGA

Protein sequence

MSFYPFHHCVLMEKSGWPGRDCGEHYLKPKTNCQRLGTDGKPIVLFTQKHDKSQAGPGLVTWFPEAPCSSLFFIHVAVNVLLFMSLKAMKVAKHDGTNPQRPPNATLPLFPLSNWYPFGSLFFLFKIVIFLALLSSFLFGYSLSESNLQFSVKHRGLVGGYSYSF

Homology

The following BLAST results are available for this feature:

BLAST of CmaCh03G007010.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh03G007010.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh03G007010.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh03G007010.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh03G007010	CmaCh03G007010	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh03G007010.1:exon:567	CmaCh03G007010.1:exon:567	exon
CmaCh03G007010.1:exon:566	CmaCh03G007010.1:exon:566	exon
CmaCh03G007010.1:exon:565	CmaCh03G007010.1:exon:565	exon
CmaCh03G007010.1:exon:564	CmaCh03G007010.1:exon:564	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh03G007010.1:cds	CmaCh03G007010.1:cds_4	CDS
CmaCh03G007010.1:cds	CmaCh03G007010.1:cds_3	CDS
CmaCh03G007010.1:cds	CmaCh03G007010.1:cds_2	CDS
CmaCh03G007010.1:cds	CmaCh03G007010.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh03G007010.1	CmaCh03G007010.1-protein	polypeptide