CmaCh03G004580.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G004580.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine synthase
Location	Cma_Chr03: 4697309 .. 4699978 (+)
Sequence length	1098
RNA-Seq Expression	CmaCh03G004580.1
Synteny	CmaCh03G004580.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGAACGGTGAACAACATCCACCGCCCCGACACCTCAGTGAACGCGCCATAAACTCCGATTTTCTCTCCTTTTCTCTGCGAAAAAATGACGAACCTCAATCTGCTCCGTAAGGCGCTTGGATCGCACTTCATTTCTCATTCAGCAACGCCAAATCATGGCCTTCCTGTGTTTTTCCGCCAATCTTCAAGATTCTTCTCGATGGAAGGGGAACAATCACCTCCTGAATCGTCCGCCAATTCTTTTCTTGATACATTGGAAACAGCAGGTATGAAGCTCGTTCCTACGTCTTCGTCGAGTCTGGACGATGTTCTCGTGTCGTGTGTTATGTTGGGAGAGGTTTAGGGTTTATAGATTGTGGCTGGTTTGAATTTTGGGAACAATTTTCTTTCTCGTTTATTTGAGCTTCTGGTAAATAAGTTTGGCTGATTGTACTAATCGATTCAGGTTTTTTTGATTCTGTAAGTTTTGAGTAATTTGGAATGCATTAATCGCTACGAAAGCCTTTTGGTGTCCTTACTGCTATACTGTTATCATTTAGGTAGCTGATTTTTTGTCTGATTCTACGTAGTGCAATGCCTAATGAGTTTTTTGTTACACTCTTATCAGGTTTGGTGTATGGAAAATTGTATGGTATCACAAGGAATGTTCTCAAGACAGACATTGTCAATTTGCTTGAAGGATGTAATTTGAGTTTGGATGATGTCAAAGTTGAATACAACCGGAGTTTCACGCCAACCTCTATGTAATGTTCTTCTTTTGCATATTTTGAATATAGATGCTTTCTGTAGCTTTCTGTATTAGGTTTTACCATCGTAGTTATGGTTCTATTCCTACTGCATCTTGGAAACTAAAATAATCAAAGAATATCTAATTGCCCTTTTGATCCTTAAAGCATTAATACAAATGCAGTCCTTAGGCCTGGATTATTAGCTACATGTTAATCTATGGAATATGCGTTCAATTAAGCGCGTTGTACCTTTTCTGTAAAAGGGTTATATTTCTAAGGAGAAACCCAATTGTGTAATGTTTATGGATGTTGAGTAACACTGGTGTTCGAGGTTGGTTTTCATTAAATATTTATGGATGTTGTAATCAGGATGATGCAATTCCCCTCCCGGAAGTCCTATGATAATGCTTTTCGAGTGATTGGAAGAAGAGGTCGCATATACAGATTGGAGCGGGTGATGTTCTGATGGATATCTAATAAAAAATGGATTTATTTTTTGTCTTGTTTTAAAATTTAGAAACATATTAACTTCTATTCTAAATTTCAGGCTGATCGTTCGCAGTGGGACCTTCTTTCACCTTACAATGGAAAAACTGTAATGCCATTTTTTAAAAATTATGAACTTATTGTCCATTGAGAAATCTCTTTACCATTCATATTCTTGTTTTTGTTATTGGCATCTTTGATCAGAAAGCAATCCATTCTACTTTATCTTTGTTTATCTAATATCATATGCTCGAATGGCATGGTTTCGAGGATCAAGCATACATATCAATATGTTCTCTGCTATTCTACTGCATGATGGTTAATTTCAATGGATTGTTCCTTACATCTCCAAAACTGATTATAGAGAAACTACTTTTTCATGTTAAACTGTTTAGAAGGGAGTAAGAAAAATGTTAGCCAAGGTCCTCGGTCTGGATCCCCCTTTAGTAGCTTCTCGAGGATATAAAACTGTTGTAACGACTTCAACTTAGAAGATTAAGGGTTTTTTTTTTCGTAAGATCGTTTATAATGAAAAAATAACATGATGATGTGATTAGATTTTCAATTGAAACTTGATATTTCAAGATTAAGAATTGGCTACCTTTCTGGTCGCAAGTTTGTTGTTCGTAAAATCATGTGCAACTTATTGTGCAGACTGCAGTTAATGGGTGTCTCATATTAAATTTAAGCCTCTCAACTCTGGATTGGTTCGGACTTTTTTCCTGTGGGATTAAATTTTCTTTGTACATACAGGTTCTTCTGCAAGGAATACCTCGAAATGCAGCGCTAGATGACGTGGAGCGCTTCTTATCTGGCTGTGACTATGATGCAACCTTAATCAATATGTTTTTCAGGTAGAGATCAATTATTTGTACCAAAGTTTCATACATCAATGAAAAAAAGTAATAATAGTTTAAAAAAAAGAAAAGTTCAGAATTAGTATTGTAGTACTTGTAGGAATTCTGTGTGATGCATCATTTATACATCATTGCAGGGCATCCATTCCAGAGCCCATCAGAATGGCGACAGTGCTGTTCCCTTCACCAACACAAGCAATGCATGCATTTCTTACTAAGAACAGAGGCTTTTGTCTGAACAACCAAATTTTGATGCGGGTTCTCCAATAACTAGTTACTGTTGTCATCTATATTCTACACATTTTTGGTTGGCTCGGTGTCTGGGCGTTCTGAAGTAGTCGTATGAGTTACGACTTGCATCTTCATATCTCAAGCCTCAAGTTATCTGAGTCACATGCATCATTCAAAGTGACCTGAATTCATTTGTAAGGAAGGATATCTGGATTACATAAAAATAAGGTTGTCGAATTATCGTGAAACTAGGCAGTTTTTGTTGTGTGACTGCTAGCCAACCCTTTTCACTATGGCCTTCATAGATTGCCGAACTTTTAATTATGTATCTAACAAATTAAATCTTTAAACATTAATTAATTTTCAT

mRNA sequence

TTGGAACGGTGAACAACATCCACCGCCCCGACACCTCAGTGAACGCGCCATAAACTCCGATTTTCTCTCCTTTTCTCTGCGAAAAAATGACGAACCTCAATCTGCTCCGTAAGGCGCTTGGATCGCACTTCATTTCTCATTCAGCAACGCCAAATCATGGCCTTCCTGTGTTTTTCCGCCAATCTTCAAGATTCTTCTCGATGGAAGGGGAACAATCACCTCCTGAATCGTCCGCCAATTCTTTTCTTGATACATTGGAAACAGCAGGTTTGGTGTATGGAAAATTGTATGGTATCACAAGGAATGTTCTCAAGACAGACATTGTCAATTTGCTTGAAGGATGTAATTTGAGTTTGGATGATGTCAAAGTTGAATACAACCGGAGTTTCACGCCAACCTCTATGATGATGCAATTCCCCTCCCGGAAGTCCTATGATAATGCTTTTCGAGTGATTGGAAGAAGAGGTCGCATATACAGATTGGAGCGGGCTGATCGTTCGCAGTGGGACCTTCTTTCACCTTACAATGGAAAAACTGTTCTTCTGCAAGGAATACCTCGAAATGCAGCGCTAGATGACGTGGAGCGCTTCTTATCTGGCTGTGACTATGATGCAACCTTAATCAATATGTTTTTCAGGGCATCCATTCCAGAGCCCATCAGAATGGCGACAGTGCTGTTCCCTTCACCAACACAAGCAATGCATGCATTTCTTACTAAGAACAGAGGCTTTTGTCTGAACAACCAAATTTTGATGCGGGTTCTCCAATAACTAGTTACTGTTGTCATCTATATTCTACACATTTTTGGTTGGCTCGGTGTCTGGGCGTTCTGAAGTAGTCGTATGAGTTACGACTTGCATCTTCATATCTCAAGCCTCAAGTTATCTGAGTCACATGCATCATTCAAAGTGACCTGAATTCATTTGTAAGGAAGGATATCTGGATTACATAAAAATAAGGTTGTCGAATTATCGTGAAACTAGGCAGTTTTTGTTGTGTGACTGCTAGCCAACCCTTTTCACTATGGCCTTCATAGATTGCCGAACTTTTAATTATGTATCTAACAAATTAAATCTTTAAACATTAATTAATTTTCAT

Coding sequence (CDS)

ATGACGAACCTCAATCTGCTCCGTAAGGCGCTTGGATCGCACTTCATTTCTCATTCAGCAACGCCAAATCATGGCCTTCCTGTGTTTTTCCGCCAATCTTCAAGATTCTTCTCGATGGAAGGGGAACAATCACCTCCTGAATCGTCCGCCAATTCTTTTCTTGATACATTGGAAACAGCAGGTTTGGTGTATGGAAAATTGTATGGTATCACAAGGAATGTTCTCAAGACAGACATTGTCAATTTGCTTGAAGGATGTAATTTGAGTTTGGATGATGTCAAAGTTGAATACAACCGGAGTTTCACGCCAACCTCTATGATGATGCAATTCCCCTCCCGGAAGTCCTATGATAATGCTTTTCGAGTGATTGGAAGAAGAGGTCGCATATACAGATTGGAGCGGGCTGATCGTTCGCAGTGGGACCTTCTTTCACCTTACAATGGAAAAACTGTTCTTCTGCAAGGAATACCTCGAAATGCAGCGCTAGATGACGTGGAGCGCTTCTTATCTGGCTGTGACTATGATGCAACCTTAATCAATATGTTTTTCAGGGCATCCATTCCAGAGCCCATCAGAATGGCGACAGTGCTGTTCCCTTCACCAACACAAGCAATGCATGCATTTCTTACTAAGAACAGAGGCTTTTGTCTGAACAACCAAATTTTGATGCGGGTTCTCCAATAA

Protein sequence

MTNLNLLRKALGSHFISHSATPNHGLPVFFRQSSRFFSMEGEQSPPESSANSFLDTLETAGLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKSYDNAFRVIGRRGRIYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATLINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ

Homology

[Close]

BLAST of CmaCh03G004580.1 vs. ExPASy TrEMBL
Match: A0A6J1INA4 (uncharacterized protein LOC111477976 OS=Cucurbita maxima OX=3661 GN=LOC111477976 PE=4 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 6.1e-126
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0


Query: 1   MTNLNLLRKALGSHFISHSATPNHGLPVFFRQSSRFFSMEGEQSPPESSANSFLDTLETA 60
           MTNLNLLRKALGSHFISHSATPNHGLPVFFRQSSRFFSMEGEQSPPESSANSFLDTLETA
Sbjct: 1   MTNLNLLRKALGSHFISHSATPNHGLPVFFRQSSRFFSMEGEQSPPESSANSFLDTLETA 60

Query: 61  GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKSYDNAF 120
           GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKSYDNAF
Sbjct: 61  GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKSYDNAF 120

Query: 121 RVIGRRGRIYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATLIN 180
           RVIGRRGRIYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATLIN
Sbjct: 121 RVIGRRGRIYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATLIN 180

Query: 181 MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 228
           MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Sbjct: 181 MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227

[Close]

BLAST of CmaCh03G004580.1 vs. ExPASy TrEMBL
Match: A0A6J1GDZ1 (uncharacterized protein LOC111453126 OS=Cucurbita moschata OX=3662 GN=LOC111453126 PE=4 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 6.5e-120
Identity = 217/227 (95.59%), Postives = 220/227 (96.92%), Query Frame = 0


Query: 1   MTNLNLLRKALGSHFISHSATPNHGLPVFFRQSSRFFSMEGEQSPPESSANSFLDTLETA 60
           MTNLNLLRKALGSHF S SATPNHGLPVFFRQSSRFFS EGEQSPPESSANSFLDT ETA
Sbjct: 1   MTNLNLLRKALGSHFTSRSATPNHGLPVFFRQSSRFFSTEGEQSPPESSANSFLDTSETA 60

Query: 61  GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKSYDNAF 120
           GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPS K+YDNAF
Sbjct: 61  GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSWKAYDNAF 120

Query: 121 RVIGRRGRIYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATLIN 180
           RVIGRRGR+YRLERADRSQWDLLSPYNGK +LLQGIPRNAALDDVERFLSGCDYDAT IN
Sbjct: 121 RVIGRRGRMYRLERADRSQWDLLSPYNGKIILLQGIPRNAALDDVERFLSGCDYDATSIN 180

Query: 181 MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 228
           MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Sbjct: 181 MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227

[Close]

BLAST of CmaCh03G004580.1 vs. ExPASy TrEMBL
Match: A0A6J1I6U3 (uncharacterized protein LOC111471264 OS=Cucurbita maxima OX=3661 GN=LOC111471264 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.2e-108
Identity = 196/227 (86.34%), Postives = 210/227 (92.51%), Query Frame = 0


Query: 1   MTNLNLLRKALGSHFISHSATPNHGLPVFFRQSSRFFSMEGEQSPPESSANSFLDTLETA 60
           M+ L LLRKALGSHF++ SA  NHGLPVFFRQS RFFS EGEQ P E  A+SFLDT +TA
Sbjct: 1   MSALGLLRKALGSHFVTPSARANHGLPVFFRQSPRFFSTEGEQPPLEPPADSFLDTSKTA 60

Query: 61  GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKSYDNAF 120
           GLVYGKLYGITRN LKTDIVNLLEGCNL+LDDVKVEYNRSFTPTSMMMQFPSR++YDNAF
Sbjct: 61  GLVYGKLYGITRNTLKTDIVNLLEGCNLNLDDVKVEYNRSFTPTSMMMQFPSRQAYDNAF 120

Query: 121 RVIGRRGRIYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATLIN 180
           RVIGR+GR+YRLERADRSQWD+LSPYNGKTVLLQGIPRNA ++DVERFL GCDYDAT IN
Sbjct: 121 RVIGRKGRLYRLERADRSQWDILSPYNGKTVLLQGIPRNALVEDVERFLLGCDYDATSIN 180

Query: 181 MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 228
           MFFRAS PEP+RMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Sbjct: 181 MFFRASFPEPMRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227

[Close]

BLAST of CmaCh03G004580.1 vs. ExPASy TrEMBL
Match: A0A6J1HGY5 (uncharacterized protein LOC111463377 OS=Cucurbita moschata OX=3662 GN=LOC111463377 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 9.1e-106
Identity = 192/227 (84.58%), Postives = 208/227 (91.63%), Query Frame = 0


Query: 1   MTNLNLLRKALGSHFISHSATPNHGLPVFFRQSSRFFSMEGEQSPPESSANSFLDTLETA 60
           M+ L LLRKAL SHF++ SA  NHGLPVFFRQS RFFS EGEQ P ES A+ FLDT +TA
Sbjct: 1   MSALGLLRKALRSHFVTPSARANHGLPVFFRQSPRFFSTEGEQPPLESPADPFLDTSKTA 60

Query: 61  GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKSYDNAF 120
           GLVYGKL GITRN LKTDIVNLLEGCNL+LDDVKVEYNRSFTPTSMMMQFPSR++YDNAF
Sbjct: 61  GLVYGKLSGITRNTLKTDIVNLLEGCNLNLDDVKVEYNRSFTPTSMMMQFPSRQAYDNAF 120

Query: 121 RVIGRRGRIYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATLIN 180
           RVIGR+GR+YRLERADRSQWD+LSPY+GKTVLLQGIPRNA ++DVERFL GCDYDAT IN
Sbjct: 121 RVIGRKGRLYRLERADRSQWDILSPYSGKTVLLQGIPRNALVEDVERFLLGCDYDATSIN 180

Query: 181 MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 228
           MFFRAS PEP+R+ATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Sbjct: 181 MFFRASFPEPMRLATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227

[Close]

BLAST of CmaCh03G004580.1 vs. ExPASy TrEMBL
Match: A0A6J1CQY2 (uncharacterized protein LOC111013764 OS=Momordica charantia OX=3673 GN=LOC111013764 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 3.0e-101
Identity = 186/229 (81.22%), Postives = 204/229 (89.08%), Query Frame = 0


Query: 1   MTNLNLLRKALGSHFISHSATPNHGLPVFFRQSS--RFFSMEGEQSPPESSANSFLDTLE 60
           M+NL+LLRK  GSHF+S +   +HG PVFFR+S   R FS E EQ P E  A+SFLDT +
Sbjct: 1   MSNLSLLRKEFGSHFLSRAPRTSHGFPVFFRESPTIRLFSTEAEQPPSEPPADSFLDTSK 60

Query: 61  TAGLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKSYDN 120
           T GLVYGKLYGITRN LKTDIVNLLEGCNL LDDVKV+YNRSFTPTSMMMQFPSR++YDN
Sbjct: 61  T-GLVYGKLYGITRNTLKTDIVNLLEGCNLGLDDVKVDYNRSFTPTSMMMQFPSRQAYDN 120

Query: 121 AFRVIGRRGRIYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATL 180
           A RVIGR+GR+YRLERADRSQWDLLSPYNGKTVLLQG+PRNA  +DVERFLSGC+YDAT 
Sbjct: 121 AIRVIGRKGRLYRLERADRSQWDLLSPYNGKTVLLQGLPRNAMQEDVERFLSGCNYDATS 180

Query: 181 INMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 228
           INMFFRAS+PEP+RMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Sbjct: 181 INMFFRASVPEPMRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 228

[Close]

BLAST of CmaCh03G004580.1 vs. NCBI nr
Match: XP_022977775.1 (uncharacterized protein LOC111477976 [Cucurbita maxima])

HSP 1 Score: 459.9 bits (1182), Expect = 1.3e-125
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0


Query: 1   MTNLNLLRKALGSHFISHSATPNHGLPVFFRQSSRFFSMEGEQSPPESSANSFLDTLETA 60
           MTNLNLLRKALGSHFISHSATPNHGLPVFFRQSSRFFSMEGEQSPPESSANSFLDTLETA
Sbjct: 1   MTNLNLLRKALGSHFISHSATPNHGLPVFFRQSSRFFSMEGEQSPPESSANSFLDTLETA 60

Query: 61  GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKSYDNAF 120
           GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKSYDNAF
Sbjct: 61  GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKSYDNAF 120

Query: 121 RVIGRRGRIYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATLIN 180
           RVIGRRGRIYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATLIN
Sbjct: 121 RVIGRRGRIYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATLIN 180

Query: 181 MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 228
           MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Sbjct: 181 MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227

[Close]

BLAST of CmaCh03G004580.1 vs. NCBI nr
Match: XP_022949855.1 (uncharacterized protein LOC111453126 [Cucurbita moschata])

HSP 1 Score: 439.9 bits (1130), Expect = 1.3e-119
Identity = 217/227 (95.59%), Postives = 220/227 (96.92%), Query Frame = 0


Query: 1   MTNLNLLRKALGSHFISHSATPNHGLPVFFRQSSRFFSMEGEQSPPESSANSFLDTLETA 60
           MTNLNLLRKALGSHF S SATPNHGLPVFFRQSSRFFS EGEQSPPESSANSFLDT ETA
Sbjct: 1   MTNLNLLRKALGSHFTSRSATPNHGLPVFFRQSSRFFSTEGEQSPPESSANSFLDTSETA 60

Query: 61  GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKSYDNAF 120
           GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPS K+YDNAF
Sbjct: 61  GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSWKAYDNAF 120

Query: 121 RVIGRRGRIYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATLIN 180
           RVIGRRGR+YRLERADRSQWDLLSPYNGK +LLQGIPRNAALDDVERFLSGCDYDAT IN
Sbjct: 121 RVIGRRGRMYRLERADRSQWDLLSPYNGKIILLQGIPRNAALDDVERFLSGCDYDATSIN 180

Query: 181 MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 228
           MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Sbjct: 181 MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227

[Close]

BLAST of CmaCh03G004580.1 vs. NCBI nr
Match: XP_023544682.1 (uncharacterized protein LOC111804194 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 439.5 bits (1129), Expect = 1.8e-119
Identity = 217/227 (95.59%), Postives = 220/227 (96.92%), Query Frame = 0


Query: 1   MTNLNLLRKALGSHFISHSATPNHGLPVFFRQSSRFFSMEGEQSPPESSANSFLDTLETA 60
           MTNLNLLRKALGSHFIS SATPNHGLPVFFRQSSRFFS EGEQSPPESSA+SFLDT    
Sbjct: 1   MTNLNLLRKALGSHFISRSATPNHGLPVFFRQSSRFFSTEGEQSPPESSADSFLDTSGAT 60

Query: 61  GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKSYDNAF 120
           GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRK+YDNAF
Sbjct: 61  GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAF 120

Query: 121 RVIGRRGRIYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATLIN 180
           RVIGRRGR+YRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDAT IN
Sbjct: 121 RVIGRRGRMYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATSIN 180

Query: 181 MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 228
           MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Sbjct: 181 MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227

[Close]

BLAST of CmaCh03G004580.1 vs. NCBI nr
Match: XP_022972751.1 (uncharacterized protein LOC111471264 [Cucurbita maxima])

HSP 1 Score: 402.5 bits (1033), Expect = 2.4e-108
Identity = 196/227 (86.34%), Postives = 210/227 (92.51%), Query Frame = 0


Query: 1   MTNLNLLRKALGSHFISHSATPNHGLPVFFRQSSRFFSMEGEQSPPESSANSFLDTLETA 60
           M+ L LLRKALGSHF++ SA  NHGLPVFFRQS RFFS EGEQ P E  A+SFLDT +TA
Sbjct: 1   MSALGLLRKALGSHFVTPSARANHGLPVFFRQSPRFFSTEGEQPPLEPPADSFLDTSKTA 60

Query: 61  GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKSYDNAF 120
           GLVYGKLYGITRN LKTDIVNLLEGCNL+LDDVKVEYNRSFTPTSMMMQFPSR++YDNAF
Sbjct: 61  GLVYGKLYGITRNTLKTDIVNLLEGCNLNLDDVKVEYNRSFTPTSMMMQFPSRQAYDNAF 120

Query: 121 RVIGRRGRIYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATLIN 180
           RVIGR+GR+YRLERADRSQWD+LSPYNGKTVLLQGIPRNA ++DVERFL GCDYDAT IN
Sbjct: 121 RVIGRKGRLYRLERADRSQWDILSPYNGKTVLLQGIPRNALVEDVERFLLGCDYDATSIN 180

Query: 181 MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 228
           MFFRAS PEP+RMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Sbjct: 181 MFFRASFPEPMRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227

[Close]

BLAST of CmaCh03G004580.1 vs. NCBI nr
Match: XP_023518188.1 (uncharacterized protein LOC111781730 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 397.1 bits (1019), Expect = 1.0e-106
Identity = 193/227 (85.02%), Postives = 208/227 (91.63%), Query Frame = 0


Query: 1   MTNLNLLRKALGSHFISHSATPNHGLPVFFRQSSRFFSMEGEQSPPESSANSFLDTLETA 60
           M+ L LLRKAL SHF++ SA  NHGLPVFFRQS RFFS EGEQ P E  A+ FLDT +TA
Sbjct: 35  MSALGLLRKALRSHFVTPSARANHGLPVFFRQSPRFFSTEGEQPPSEPPADPFLDTSKTA 94

Query: 61  GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKSYDNAF 120
           GLVYGKLYGITRN LKTDIVNLLEGCNL+LDDVKVEYNRSFTPTSMMMQFPSR++YDNAF
Sbjct: 95  GLVYGKLYGITRNTLKTDIVNLLEGCNLNLDDVKVEYNRSFTPTSMMMQFPSRQAYDNAF 154

Query: 121 RVIGRRGRIYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATLIN 180
           RVIGR+GR+YRLERADRSQWD+LSPYNGKTVLLQGIPRNA ++DVERFL GCDYDAT IN
Sbjct: 155 RVIGRKGRLYRLERADRSQWDILSPYNGKTVLLQGIPRNALVEDVERFLLGCDYDATSIN 214

Query: 181 MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 228
           MFFRAS PEP+R+ATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Sbjct: 215 MFFRASFPEPMRLATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 261

[Close]

BLAST of CmaCh03G004580.1 vs. TAIR 10
Match: AT5G02740.1 (Ribosomal protein S24e family protein )

HSP 1 Score: 174.9 bits (442), Expect = 7.5e-44
Identity = 97/229 (42.36%), Postives = 134/229 (58.52%), Query Frame = 0


Query: 4   LNLLRKALGSHFISHSATP---NHGLPVFFRQSSRFFSMEGEQSPPESSANSFLDTLETA 63
           +++ R A+ S        P      LP F ++  +  S   EQ PP S            
Sbjct: 1   MSITRSAIRSSLCLRKLDPEISRSSLP-FLQEWRKCLSTATEQPPPASPLPPPPGGSPGE 60

Query: 64  GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNR--SFTPTSMMMQFPSRKSYDN 123
           G  YGK  G +++ LKTDI+N+LEGC+L+ DD+K  Y R  + TP ++ +QFPS  +YD 
Sbjct: 61  GRFYGKFSGFSKHALKTDIMNVLEGCSLTSDDLKFNYPRGGNLTPAAVFVQFPSLSAYDK 120

Query: 124 AFRVIGRRGRIYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATL 183
           A R I ++G++YRLE+A R+QWD + PY GK V L GIP NA  DD++RFLSGC Y    
Sbjct: 121 ALRNIAKKGKLYRLEKAARAQWDPIVPYEGKVVALHGIPVNAITDDIDRFLSGCLYYPGS 180

Query: 184 INMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 228
           I       +    R+A V F S TQAM+A++TKNR F LN +I ++VLQ
Sbjct: 181 IQFLTVQGLGTSKRVALVRFTSQTQAMNAYITKNRNFLLNQRITLQVLQ 228

[Close]

BLAST of CmaCh03G004580.1 vs. TAIR 10
Match: AT5G02740.2 (Ribosomal protein S24e family protein )

HSP 1 Score: 140.2 bits (352), Expect = 2.1e-33
Identity = 75/176 (42.61%), Postives = 104/176 (59.09%), Query Frame = 0


Query: 4   LNLLRKALGSHFISHSATP---NHGLPVFFRQSSRFFSMEGEQSPPESSANSFLDTLETA 63
           +++ R A+ S        P      LP F ++  +  S   EQ PP S            
Sbjct: 1   MSITRSAIRSSLCLRKLDPEISRSSLP-FLQEWRKCLSTATEQPPPASPLPPPPGGSPGE 60

Query: 64  GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNR--SFTPTSMMMQFPSRKSYDN 123
           G  YGK  G +++ LKTDI+N+LEGC+L+ DD+K  Y R  + TP ++ +QFPS  +YD 
Sbjct: 61  GRFYGKFSGFSKHALKTDIMNVLEGCSLTSDDLKFNYPRGGNLTPAAVFVQFPSLSAYDK 120

Query: 124 AFRVIGRRGRIYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDY 175
           A R I ++G++YRLE+A R+QWD + PY GK V L GIP NA  DD++RFLSGC Y
Sbjct: 121 ALRNIAKKGKLYRLEKAARAQWDPIVPYEGKVVALHGIPVNAITDDIDRFLSGCLY 175

The following BLAST results are available for this feature:

BLAST of CmaCh03G004580.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh03G004580.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1INA4	6.1e-126	100.00	uncharacterized protein LOC111477976 OS=Cucurbita maxima OX=3661 GN=LOC111477976...	[more]
A0A6J1GDZ1	6.5e-120	95.59	uncharacterized protein LOC111453126 OS=Cucurbita moschata OX=3662 GN=LOC1114531...	[more]
A0A6J1I6U3	1.2e-108	86.34	uncharacterized protein LOC111471264 OS=Cucurbita maxima OX=3661 GN=LOC111471264...	[more]
A0A6J1HGY5	9.1e-106	84.58	uncharacterized protein LOC111463377 OS=Cucurbita moschata OX=3662 GN=LOC1114633...	[more]
A0A6J1CQY2	3.0e-101	81.22	uncharacterized protein LOC111013764 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]

BLAST of CmaCh03G004580.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022977775.1	1.3e-125	100.00	uncharacterized protein LOC111477976 [Cucurbita maxima]	[more]
XP_022949855.1	1.3e-119	95.59	uncharacterized protein LOC111453126 [Cucurbita moschata]	[more]
XP_023544682.1	1.8e-119	95.59	uncharacterized protein LOC111804194 [Cucurbita pepo subsp. pepo]	[more]
XP_022972751.1	2.4e-108	86.34	uncharacterized protein LOC111471264 [Cucurbita maxima]	[more]
XP_023518188.1	1.0e-106	85.02	uncharacterized protein LOC111781730 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh03G004580.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02740.1	7.5e-44	42.36	Ribosomal protein S24e family protein	[more]
AT5G02740.2	2.1e-33	42.61	Ribosomal protein S24e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR48167	EXPRESSED PROTEIN	coord: 7..227

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh03G004580	CmaCh03G004580	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh03G004580.1:exon:1318	CmaCh03G004580.1:exon:1318	exon
CmaCh03G004580.1:exon:1319	CmaCh03G004580.1:exon:1319	exon
CmaCh03G004580.1:exon:1320	CmaCh03G004580.1:exon:1320	exon
CmaCh03G004580.1:exon:1321	CmaCh03G004580.1:exon:1321	exon
CmaCh03G004580.1:exon:1322	CmaCh03G004580.1:exon:1322	exon
CmaCh03G004580.1:exon:1323	CmaCh03G004580.1:exon:1323	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh03G004580.1:five_prime_utr	CmaCh03G004580.1:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh03G004580.1:cds	CmaCh03G004580.1:cds	CDS
CmaCh03G004580.1:cds	CmaCh03G004580.1:cds_2	CDS
CmaCh03G004580.1:cds	CmaCh03G004580.1:cds_3	CDS
CmaCh03G004580.1:cds	CmaCh03G004580.1:cds_4	CDS
CmaCh03G004580.1:cds	CmaCh03G004580.1:cds_5	CDS
CmaCh03G004580.1:cds	CmaCh03G004580.1:cds_6	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh03G004580.1:three_prime_utr	CmaCh03G004580.1:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh03G004580.1	CmaCh03G004580.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding