CmaCh03G003410.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G003410.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Late embryogenesis abundant protein B19.3
Location	Cma_Chr03: 4111933 .. 4113187 (+)
Sequence length	838
RNA-Seq Expression	CmaCh03G003410.1
Synteny	CmaCh03G003410.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTTCTCCAAAGGGCCTAAAATTCAAACCCTTTCGTATTCATATTCACACAAGCCAGAAAGCAAGAAAAGAAGGAATATGGCGGCGCAGCAGGAGAGATCGGAGCTGGAGGCCAAAGCAAAGCAGGGAGAGACCGTGGTTCCGGGCGGAACCGGCGGGAAAAGCCTCGAAGCTCAAGAACGTCTCGCCGAAGGTAATAATTGTCAGGAATCACGAACAATTCTTTATAATGACATTGACTCTTCGTAGAACCCTCAAACAGTCTATACTTGATCAATCGAGGCTCAATTCTTTCTTTAAAGTCTTCAAAGTTTAACACGACTACATTAAAGGTGACACTAATACTATATCTTTAAGAATTTTATGATAACATGACTACATTAAATTACGAATCTCACAGTATGGTCGAATTTTATTGACATGCCTCAAATTAAAGGCATAATTTTGATTTTAGGTTAAGAATCACGATTTTTCAGGATCGTATGGTATTGCTCATTTTAAGTCAAGCTCTTATAGCTTTTTATGGTCGAGTTAAGGGCATGGCTTTGATACCATTATTGTCGAATTTTATTGGCTATTCTTGAAATAAGTGAAACTTGGTTGGTTGAAGGTCGGAGCCGGGGCGGGCAGACGAGGAAAGAGCAGTTGGGGTATGAAGGGTATCAGGAGATGGGGCACCGAGGAGGAGAGACGAGAAGGGAGCAGATGGGGCAAGAAGGGTACCAAGAGATGGGCAAGAAAGGTGGGCTGAGCACCATGGATAAGTCCGCCTCCGAGCGGGTGGAGGAGGAAGGAATCGAGATCGACGAGTCCAAGTTCAGGACCAAGGACCGCTGAACCACCCTGGCTTTGGTATATGTACAATAATATGTATGTGGGCGGGTGTTTTTCATTTCCTTTACTGTTCTACTTTATGGTTGCCTTTTGTTTTCTCGACACGTGCACGTCGGTGCCTTATCGGTGGGGGGTTTGGTATTTGCGGAAGGGACGAATTTTGCTGTACCTTGTGTTCTCTTCTGCATGGAAATAGAAGTAGGGGGCTTGAAGTTATAAACTTACGACATGCTTTATTCAACTTTTGTTCGGTCATACACTTCATTTGTGCATGTCCCCGTCCCCAGTATCTTCTTGAGACACGGACTATCTTGACTTTTTAAGTATCGGATTCTTTCGTGTCTATATTGAATTATTTACGACATATTTACGACATACAATCGAAGCACTCAGAGCTCAGATTCGTCTCCTTACTCGTCCAC

mRNA sequence

ACTTCTCCAAAGGGCCTAAAATTCAAACCCTTTCGTATTCATATTCACACAAGCCAGAAAGCAAGAAAAGAAGGAATATGGCGGCGCAGCAGGAGAGATCGGAGCTGGAGGCCAAAGCAAAGCAGGGAGAGACCGTGGTTCCGGGCGGAACCGGCGGGAAAAGCCTCGAAGCTCAAGAACGTCTCGCCGAAGGTCGGAGCCGGGGCGGGCAGACGAGGAAAGAGCAGTTGGGGTATGAAGGGTATCAGGAGATGGGGCACCGAGGAGGAGAGACGAGAAGGGAGCAGATGGGGCAAGAAGGGTACCAAGAGATGGGCAAGAAAGGTGGGCTGAGCACCATGGATAAGTCCGCCTCCGAGCGGGTGGAGGAGGAAGGAATCGAGATCGACGAGTCCAAGTTCAGGACCAAGGACCGCTGAACCACCCTGGCTTTGGTATATGTACAATAATATGTATGTGGGCGGGTGTTTTTCATTTCCTTTACTGTTCTACTTTATGGTTGCCTTTTGTTTTCTCGACACGTGCACGTCGGTGCCTTATCGGTGGGGGGTTTGGTATTTGCGGAAGGGACGAATTTTGCTGTACCTTGTGTTCTCTTCTGCATGGAAATAGAAGTAGGGGGCTTGAAGTTATAAACTTACGACATGCTTTATTCAACTTTTGTTCGGTCATACACTTCATTTGTGCATGTCCCCGTCCCCAGTATCTTCTTGAGACACGGACTATCTTGACTTTTTAAGTATCGGATTCTTTCGTGTCTATATTGAATTATTTACGACATATTTACGACATACAATCGAAGCACTCAGAGCTCAGATTCGTCTCCTTACTCGTCCAC

Coding sequence (CDS)

ATGGCGGCGCAGCAGGAGAGATCGGAGCTGGAGGCCAAAGCAAAGCAGGGAGAGACCGTGGTTCCGGGCGGAACCGGCGGGAAAAGCCTCGAAGCTCAAGAACGTCTCGCCGAAGGTCGGAGCCGGGGCGGGCAGACGAGGAAAGAGCAGTTGGGGTATGAAGGGTATCAGGAGATGGGGCACCGAGGAGGAGAGACGAGAAGGGAGCAGATGGGGCAAGAAGGGTACCAAGAGATGGGCAAGAAAGGTGGGCTGAGCACCATGGATAAGTCCGCCTCCGAGCGGGTGGAGGAGGAAGGAATCGAGATCGACGAGTCCAAGTTCAGGACCAAGGACCGCTGA

Protein sequence

MAAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGYEGYQEMGHRGGETRREQMGQEGYQEMGKKGGLSTMDKSASERVEEEGIEIDESKFRTKDR

Homology

[Close]

BLAST of CmaCh03G003410.1 vs. ExPASy Swiss-Prot
Match: Q5KTS7 (Carrot ABA-induced in somatic embryos 3 OS=Daucus carota OX=4039 GN=CAISE3 PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 4.6e-39
Identity = 85/110 (77.27%), Postives = 101/110 (91.82%), Query Frame = 0


Query: 2   AAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGYEGYQEMGH 61
           + Q++RSEL+A+AKQGETVVPGGTGGKSLEAQE LAEGRS+GG TRKEQLG EGYQE+G 
Sbjct: 3   SGQEKRSELDARAKQGETVVPGGTGGKSLEAQEHLAEGRSKGGHTRKEQLGTEGYQEIGT 62

Query: 62  RGGETRREQMGQEGYQEMGKKGGLSTMDKSASERVEEEGIEIDESKFRTK 112
           +GGETRREQMG+EGY++MG+ GGL+T DKS +ER EEEGI+ID+SKFRTK
Sbjct: 63  KGGETRREQMGKEGYEQMGRMGGLATKDKSGAERAEEEGIDIDQSKFRTK 112

[Close]

BLAST of CmaCh03G003410.1 vs. ExPASy Swiss-Prot
Match: I1N2Z5 (Protein SLE1 OS=Glycine max OX=3847 GN=SLE1 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 7.9e-39
Identity = 86/106 (81.13%), Postives = 95/106 (89.62%), Query Frame = 0


Query: 4   QQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGYEGYQEMGHRG 63
           Q  R EL+ KA+QGETVVPGGTGGKSLEAQE LAEGRSRGGQTRK+QLG EGY EMG +G
Sbjct: 5   QANREELDEKARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKQQLGSEGYHEMGTKG 64

Query: 64  GETRREQMGQEGYQEMGKKGGLSTMDKSASERVEEEGIEIDESKFR 110
           G+TR+EQMG+EGYQEMG+KGGLSTMDKS  ER EEEGIEIDESKF+
Sbjct: 65  GQTRKEQMGREGYQEMGRKGGLSTMDKSGGERAEEEGIEIDESKFK 110

[Close]

BLAST of CmaCh03G003410.1 vs. ExPASy Swiss-Prot
Match: Q02400 (Late embryogenesis abundant protein B19.3 OS=Hordeum vulgare OX=4513 GN=B19.3 PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.1e-35
Identity = 85/130 (65.38%), Postives = 99/130 (76.15%), Query Frame = 0


Query: 2   AAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQ---------------- 61
           + QQERSEL+  A++GETVVPGGTGGK+LEAQE LAEGRSRGGQ                
Sbjct: 3   SGQQERSELDRMAREGETVVPGGTGGKTLEAQEHLAEGRSRGGQTRKDQLGEEGYREMGH 62

Query: 62  ----TRKEQLGYEGYQEMGHRGGETRREQMGQEGYQEMGKKGGLSTMDKSASERVEEEGI 112
               TRKEQLG EGY+EMGH+GGETR+EQMG+EGY EMG+KGGLSTM++S  ER   EGI
Sbjct: 63  KGGETRKEQLGEEGYREMGHKGGETRKEQMGEEGYHEMGRKGGLSTMEESGGERAAREGI 122

[Close]

BLAST of CmaCh03G003410.1 vs. ExPASy Swiss-Prot
Match: Q05191 (Late embryogenesis abundant protein B19.4 OS=Hordeum vulgare OX=4513 GN=B19.4 PE=2 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.2e-33
Identity = 85/150 (56.67%), Postives = 100/150 (66.67%), Query Frame = 0


Query: 2   AAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQ---------------- 61
           + QQERSEL+  A++GETVVPGGTGGK+LEAQE LAEGRSRGGQ                
Sbjct: 3   SGQQERSELDRMAREGETVVPGGTGGKTLEAQEHLAEGRSRGGQTRKEQLGEEGYREMGH 62

Query: 62  ------------------------TRKEQLGYEGYQEMGHRGGETRREQMGQEGYQEMGK 112
                                   TRKEQLG EGY+EMGH+GGETR+EQMG+EGY+EMG+
Sbjct: 63  KGGETRKEQLGEEGYREMGHKGGETRKEQLGEEGYREMGHKGGETRKEQMGEEGYREMGR 122

[Close]

BLAST of CmaCh03G003410.1 vs. ExPASy Swiss-Prot
Match: Q07187 (Em-like protein GEA1 OS=Arabidopsis thaliana OX=3702 GN=EM1 PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 2.9e-33
Identity = 88/152 (57.89%), Postives = 99/152 (65.13%), Query Frame = 0


Query: 1   MAAQQ-ERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQT------------- 60
           MA++Q  R EL+ KAKQGETVVPGGTGG SLEAQE LAEGRS+GGQT             
Sbjct: 1   MASKQLSREELDEKAKQGETVVPGGTGGHSLEAQEHLAEGRSKGGQTRKEQLGHEGYQEI 60

Query: 61  ---------------------------RKEQLGYEGYQEMGHRGGETRREQMGQEGYQEM 112
                                      RKEQLG+EGYQEMGH+GGE R+EQ+G EGY+EM
Sbjct: 61  GHKGGEARKEQLGHEGYQEMGHKGGEARKEQLGHEGYQEMGHKGGEARKEQLGHEGYKEM 120

[Close]

BLAST of CmaCh03G003410.1 vs. ExPASy TrEMBL
Match: A0A6J1IMD5 (carrot ABA-induced in somatic embryos 3 OS=Cucurbita maxima OX=3661 GN=LOC111478342 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.7e-50
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MAAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGYEGYQEMG 60
           MAAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGYEGYQEMG
Sbjct: 1   MAAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGYEGYQEMG 60

Query: 61  HRGGETRREQMGQEGYQEMGKKGGLSTMDKSASERVEEEGIEIDESKFRTKDR 114
           HRGGETRREQMGQEGYQEMGKKGGLSTMDKSASERVEEEGIEIDESKFRTKDR
Sbjct: 61  HRGGETRREQMGQEGYQEMGKKGGLSTMDKSASERVEEEGIEIDESKFRTKDR 113

[Close]

BLAST of CmaCh03G003410.1 vs. ExPASy TrEMBL
Match: A0A6J1GDL3 (carrot ABA-induced in somatic embryos 3 OS=Cucurbita moschata OX=3662 GN=LOC111453221 PE=3 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.3e-49
Identity = 111/113 (98.23%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MAAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGYEGYQEMG 60
           MAAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLG+EGYQEMG
Sbjct: 1   MAAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGHEGYQEMG 60

Query: 61  HRGGETRREQMGQEGYQEMGKKGGLSTMDKSASERVEEEGIEIDESKFRTKDR 114
           HRGGETRREQMGQEGYQEMGKKGGLSTMDKSA+ERVEEEGIEIDESKFRTKDR
Sbjct: 61  HRGGETRREQMGQEGYQEMGKKGGLSTMDKSAAERVEEEGIEIDESKFRTKDR 113

[Close]

BLAST of CmaCh03G003410.1 vs. ExPASy TrEMBL
Match: A0A5D3E0M2 (Protein SLE1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1212G00010 PE=3 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 7.2e-43
Identity = 96/113 (84.96%), Postives = 108/113 (95.58%), Query Frame = 0


Query: 1   MAAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGYEGYQEMG 60
           MA+QQ+RSEL+AKAKQGETVVPGGTGGKSL+AQERLAEGRS+GGQTRKEQLG+EGYQE+G
Sbjct: 1   MASQQQRSELDAKAKQGETVVPGGTGGKSLDAQERLAEGRSKGGQTRKEQLGHEGYQELG 60

Query: 61  HRGGETRREQMGQEGYQEMGKKGGLSTMDKSASERVEEEGIEIDESKFRTKDR 114
           H+GGE R+EQMGQEGYQEMG+KGGLSTMDKS  ER EEEGIEIDES+F TK+R
Sbjct: 61  HQGGEARKEQMGQEGYQEMGRKGGLSTMDKSGGERAEEEGIEIDESRFTTKNR 113

[Close]

BLAST of CmaCh03G003410.1 vs. ExPASy TrEMBL
Match: A0A5A7T8F9 (Protein SLE1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold141G00540 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.6e-42
Identity = 95/113 (84.07%), Postives = 108/113 (95.58%), Query Frame = 0


Query: 1   MAAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGYEGYQEMG 60
           MA+QQ+RSEL+AKAKQGETVVPGGTGGKSL+AQERLAEGRS+GGQTRKEQLG+EGY+E+G
Sbjct: 1   MASQQQRSELDAKAKQGETVVPGGTGGKSLDAQERLAEGRSKGGQTRKEQLGHEGYEELG 60

Query: 61  HRGGETRREQMGQEGYQEMGKKGGLSTMDKSASERVEEEGIEIDESKFRTKDR 114
           H+GGE R+EQMGQEGYQEMG+KGGLSTMDKS  ER EEEGIEIDES+F TK+R
Sbjct: 61  HQGGEARKEQMGQEGYQEMGRKGGLSTMDKSGGERAEEEGIEIDESRFTTKNR 113

[Close]

BLAST of CmaCh03G003410.1 vs. ExPASy TrEMBL
Match: A0A1S3CMG8 (protein SLE1 OS=Cucumis melo OX=3656 GN=LOC103502145 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.6e-42
Identity = 95/113 (84.07%), Postives = 108/113 (95.58%), Query Frame = 0


Query: 1   MAAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGYEGYQEMG 60
           MA+QQ+RSEL+AKAKQGETVVPGGTGGKSL+AQERLAEGRS+GGQTRKEQLG+EGY+E+G
Sbjct: 1   MASQQQRSELDAKAKQGETVVPGGTGGKSLDAQERLAEGRSKGGQTRKEQLGHEGYEELG 60

Query: 61  HRGGETRREQMGQEGYQEMGKKGGLSTMDKSASERVEEEGIEIDESKFRTKDR 114
           H+GGE R+EQMGQEGYQEMG+KGGLSTMDKS  ER EEEGIEIDES+F TK+R
Sbjct: 61  HQGGEARKEQMGQEGYQEMGRKGGLSTMDKSGGERAEEEGIEIDESRFTTKNR 113

[Close]

BLAST of CmaCh03G003410.1 vs. NCBI nr
Match: XP_022978321.1 (carrot ABA-induced in somatic embryos 3 [Cucurbita maxima])

HSP 1 Score: 207.6 bits (527), Expect = 5.6e-50
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MAAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGYEGYQEMG 60
           MAAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGYEGYQEMG
Sbjct: 1   MAAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGYEGYQEMG 60

Query: 61  HRGGETRREQMGQEGYQEMGKKGGLSTMDKSASERVEEEGIEIDESKFRTKDR 114
           HRGGETRREQMGQEGYQEMGKKGGLSTMDKSASERVEEEGIEIDESKFRTKDR
Sbjct: 61  HRGGETRREQMGQEGYQEMGKKGGLSTMDKSASERVEEEGIEIDESKFRTKDR 113

[Close]

BLAST of CmaCh03G003410.1 vs. NCBI nr
Match: XP_022949995.1 (carrot ABA-induced in somatic embryos 3 [Cucurbita moschata] >XP_022949996.1 carrot ABA-induced in somatic embryos 3 [Cucurbita moschata] >XP_023544726.1 carrot ABA-induced in somatic embryos 3 [Cucurbita pepo subsp. pepo] >KAG6603575.1 Carrot ABA-induced in somatic embryos 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 204.5 bits (519), Expect = 4.7e-49
Identity = 111/113 (98.23%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MAAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGYEGYQEMG 60
           MAAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLG+EGYQEMG
Sbjct: 1   MAAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGHEGYQEMG 60

Query: 61  HRGGETRREQMGQEGYQEMGKKGGLSTMDKSASERVEEEGIEIDESKFRTKDR 114
           HRGGETRREQMGQEGYQEMGKKGGLSTMDKSA+ERVEEEGIEIDESKFRTKDR
Sbjct: 61  HRGGETRREQMGQEGYQEMGKKGGLSTMDKSAAERVEEEGIEIDESKFRTKDR 113

[Close]

BLAST of CmaCh03G003410.1 vs. NCBI nr
Match: XP_038883209.1 (protein SLE1-like [Benincasa hispida])

HSP 1 Score: 186.0 bits (471), Expect = 1.7e-43
Identity = 100/113 (88.50%), Postives = 106/113 (93.81%), Query Frame = 0


Query: 1   MAAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGYEGYQEMG 60
           MA+QQERSEL+AKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLG EGYQE+G
Sbjct: 1   MASQQERSELDAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGQEGYQELG 60

Query: 61  HRGGETRREQMGQEGYQEMGKKGGLSTMDKSASERVEEEGIEIDESKFRTKDR 114
           H+GGE RREQ+G EGYQEMG+KGGLSTMDKS  ER  EEGIEIDESKFRTKDR
Sbjct: 61  HQGGEARREQIGHEGYQEMGRKGGLSTMDKSGGERAAEEGIEIDESKFRTKDR 113

[Close]

BLAST of CmaCh03G003410.1 vs. NCBI nr
Match: TYK29241.1 (protein SLE1 [Cucumis melo var. makuwa])

HSP 1 Score: 183.0 bits (463), Expect = 1.5e-42
Identity = 96/113 (84.96%), Postives = 108/113 (95.58%), Query Frame = 0


Query: 1   MAAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGYEGYQEMG 60
           MA+QQ+RSEL+AKAKQGETVVPGGTGGKSL+AQERLAEGRS+GGQTRKEQLG+EGYQE+G
Sbjct: 1   MASQQQRSELDAKAKQGETVVPGGTGGKSLDAQERLAEGRSKGGQTRKEQLGHEGYQELG 60

Query: 61  HRGGETRREQMGQEGYQEMGKKGGLSTMDKSASERVEEEGIEIDESKFRTKDR 114
           H+GGE R+EQMGQEGYQEMG+KGGLSTMDKS  ER EEEGIEIDES+F TK+R
Sbjct: 61  HQGGEARKEQMGQEGYQEMGRKGGLSTMDKSGGERAEEEGIEIDESRFTTKNR 113

[Close]

BLAST of CmaCh03G003410.1 vs. NCBI nr
Match: XP_008464211.1 (PREDICTED: protein SLE1 [Cucumis melo] >KAA0037755.1 protein SLE1 [Cucumis melo var. makuwa])

HSP 1 Score: 181.8 bits (460), Expect = 3.3e-42
Identity = 95/113 (84.07%), Postives = 108/113 (95.58%), Query Frame = 0


Query: 1   MAAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGYEGYQEMG 60
           MA+QQ+RSEL+AKAKQGETVVPGGTGGKSL+AQERLAEGRS+GGQTRKEQLG+EGY+E+G
Sbjct: 1   MASQQQRSELDAKAKQGETVVPGGTGGKSLDAQERLAEGRSKGGQTRKEQLGHEGYEELG 60

Query: 61  HRGGETRREQMGQEGYQEMGKKGGLSTMDKSASERVEEEGIEIDESKFRTKDR 114
           H+GGE R+EQMGQEGYQEMG+KGGLSTMDKS  ER EEEGIEIDES+F TK+R
Sbjct: 61  HQGGEARKEQMGQEGYQEMGRKGGLSTMDKSGGERAEEEGIEIDESRFTTKNR 113

[Close]

BLAST of CmaCh03G003410.1 vs. TAIR 10
Match: AT3G51810.1 (Stress induced protein )

HSP 1 Score: 142.5 bits (358), Expect = 2.1e-34
Identity = 88/152 (57.89%), Postives = 99/152 (65.13%), Query Frame = 0


Query: 1   MAAQQ-ERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQT------------- 60
           MA++Q  R EL+ KAKQGETVVPGGTGG SLEAQE LAEGRS+GGQT             
Sbjct: 1   MASKQLSREELDEKAKQGETVVPGGTGGHSLEAQEHLAEGRSKGGQTRKEQLGHEGYQEI 60

Query: 61  ---------------------------RKEQLGYEGYQEMGHRGGETRREQMGQEGYQEM 112
                                      RKEQLG+EGYQEMGH+GGE R+EQ+G EGY+EM
Sbjct: 61  GHKGGEARKEQLGHEGYQEMGHKGGEARKEQLGHEGYQEMGHKGGEARKEQLGHEGYKEM 120

[Close]

BLAST of CmaCh03G003410.1 vs. TAIR 10
Match: AT2G40170.1 (Stress induced protein )

HSP 1 Score: 121.3 bits (303), Expect = 4.9e-28
Identity = 70/111 (63.06%), Postives = 80/111 (72.07%), Query Frame = 0


Query: 1   MAAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGYEGYQEMG 60
           MA+QQE+ +L+ +AK+GETVVPGGTGGKS EAQ+ LAEGRSRGGQTRKEQL         
Sbjct: 1   MASQQEKKQLDERAKKGETVVPGGTGGKSFEAQQHLAEGRSRGGQTRKEQL--------- 60

Query: 61  HRGGETRREQMGQEGYQEMGKKGGLSTMDKSASERVEEEGIEIDESKFRTK 112
                      G EGYQ+MG+KGGLST DK   E  EEEG+EIDESKFRTK
Sbjct: 61  -----------GTEGYQQMGRKGGLSTGDKPGGEHAEEEGVEIDESKFRTK 91

The following BLAST results are available for this feature:

BLAST of CmaCh03G003410.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5KTS7	4.6e-39	77.27	Carrot ABA-induced in somatic embryos 3 OS=Daucus carota OX=4039 GN=CAISE3 PE=2 ...	[more]
I1N2Z5	7.9e-39	81.13	Protein SLE1 OS=Glycine max OX=3847 GN=SLE1 PE=2 SV=1	[more]
Q02400	1.1e-35	65.38	Late embryogenesis abundant protein B19.3 OS=Hordeum vulgare OX=4513 GN=B19.3 PE...	[more]
Q05191	2.2e-33	56.67	Late embryogenesis abundant protein B19.4 OS=Hordeum vulgare OX=4513 GN=B19.4 PE...	[more]
Q07187	2.9e-33	57.89	Em-like protein GEA1 OS=Arabidopsis thaliana OX=3702 GN=EM1 PE=2 SV=1	[more]

BLAST of CmaCh03G003410.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IMD5	2.7e-50	100.00	carrot ABA-induced in somatic embryos 3 OS=Cucurbita maxima OX=3661 GN=LOC111478...	[more]
A0A6J1GDL3	2.3e-49	98.23	carrot ABA-induced in somatic embryos 3 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A5D3E0M2	7.2e-43	84.96	Protein SLE1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1212G00010 ...	[more]
A0A5A7T8F9	1.6e-42	84.07	Protein SLE1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold141G00540 P...	[more]
A0A1S3CMG8	1.6e-42	84.07	protein SLE1 OS=Cucumis melo OX=3656 GN=LOC103502145 PE=3 SV=1	[more]

BLAST of CmaCh03G003410.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022978321.1	5.6e-50	100.00	carrot ABA-induced in somatic embryos 3 [Cucurbita maxima]	[more]
XP_022949995.1	4.7e-49	98.23	carrot ABA-induced in somatic embryos 3 [Cucurbita moschata] >XP_022949996.1 car...	[more]
XP_038883209.1	1.7e-43	88.50	protein SLE1-like [Benincasa hispida]	[more]
TYK29241.1	1.5e-42	84.96	protein SLE1 [Cucumis melo var. makuwa]	[more]
XP_008464211.1	3.3e-42	84.07	PREDICTED: protein SLE1 [Cucumis melo] >KAA0037755.1 protein SLE1 [Cucumis melo ...	[more]

BLAST of CmaCh03G003410.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51810.1	2.1e-34	57.89	Stress induced protein	[more]
AT2G40170.1	4.9e-28	63.06	Stress induced protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038956	Late embryogenesis abundant protein, LEA_5 subgroup	PFAM	PF00477	LEA_5	coord: 3..108 e-value: 3.5E-54 score: 181.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..113
None	No IPR available	PANTHER	PTHR34671:SF19	EMBRYONIC ABUNDANT PROTEIN 1	coord: 62..111
None	No IPR available	PANTHER	PTHR34671:SF19	EMBRYONIC ABUNDANT PROTEIN 1	coord: 1..64
IPR000389	Small hydrophilic plant seed protein	PANTHER	PTHR34671	EM-LIKE PROTEIN GEA1	coord: 1..64
IPR000389	Small hydrophilic plant seed protein	PANTHER	PTHR34671	EM-LIKE PROTEIN GEA1	coord: 62..111
IPR022377	Small hydrophilic plant seed protein, conserved site	PROSITE	PS00431	SMALL_HYDR_PLANT_SEED	coord: 17..25

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh03G003410	CmaCh03G003410	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh03G003410.1:exon:936	CmaCh03G003410.1:exon:936	exon
CmaCh03G003410.1:exon:937	CmaCh03G003410.1:exon:937	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh03G003410.1:five_prime_utr	CmaCh03G003410.1:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh03G003410.1:cds	CmaCh03G003410.1:cds	CDS
CmaCh03G003410.1:cds	CmaCh03G003410.1:cds_2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh03G003410.1:three_prime_utr	CmaCh03G003410.1:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh03G003410.1	CmaCh03G003410.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009737	response to abscisic acid