CmaCh03G002380.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G002380.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr03: 3481281 .. 3481758 (-)
Sequence length	216
RNA-Seq Expression	CmaCh03G002380.1
Synteny	CmaCh03G002380.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATCCCTTTTTGCATTGCTCAAGCACAGTGGTGGTCATCCCTTGAAGAAAGCTGCTGCTGCTCCTGCACTGGCGTCGAGTGTTTTTATCGTCCCGTAATTTATTTAATATTTTATTTTTTGTGCGCTTGTTTAAAGCATCGATTTTGCACGGTCTGAGCGCTACGTTATAGAGTTGATATATAGTTTGTGTATAGTACGAAATCATTGGTGAACCAGTTCCTACTCTCAAGGAAAAGAGTGAAGCAGCAAGCAAAACAATGTCGAGTGGTTATTTGTTATTTGAGGCTTTGAAGTTTTGGAGAAGAGTGAGGTCGAAGCGTCACGTCTTTGAGCTCTAAAAATTTAAGAAATTATTTGTTTGCCACAATGTCTTGGTTTTTGTACCTAATTTTTTTTATATTAATTGCTTATTAGGTTATTACAATGTGTTTTGTGGAGACTTGCCCGGAATAAGAGGTAGAATCTCTATTTAA

mRNA sequence

ATGTCATCCCTTTTTGCATTGCTCAAGCACAGTGGTGGTCATCCCTTGAAGAAAGCTGCTGCTGCTCCTGCACTGGCGTCGAGTTACGAAATCATTGGTGAACCAGTTCCTACTCTCAAGGAAAAGAGTGAAGCAGCAAGCAAAACAATGTCGAGTGGTTATTACAATGTGTTTTGTGGAGACTTGCCCGGAATAAGAGGTAGAATCTCTATTTAA

Coding sequence (CDS)

ATGTCATCCCTTTTTGCATTGCTCAAGCACAGTGGTGGTCATCCCTTGAAGAAAGCTGCTGCTGCTCCTGCACTGGCGTCGAGTTACGAAATCATTGGTGAACCAGTTCCTACTCTCAAGGAAAAGAGTGAAGCAGCAAGCAAAACAATGTCGAGTGGTTATTACAATGTGTTTTGTGGAGACTTGCCCGGAATAAGAGGTAGAATCTCTATTTAA

Protein sequence

MSSLFALLKHSGGHPLKKAAAAPALASSYEIIGEPVPTLKEKSEAASKTMSSGYYNVFCGDLPGIRGRISI

Homology

The following BLAST results are available for this feature:

BLAST of CmaCh03G002380.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh03G002380.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh03G002380.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh03G002380.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh03G002380	CmaCh03G002380	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh03G002380.1:exon:1320	CmaCh03G002380.1:exon:1320	exon
CmaCh03G002380.1:exon:1319	CmaCh03G002380.1:exon:1319	exon
CmaCh03G002380.1:exon:1318	CmaCh03G002380.1:exon:1318	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh03G002380.1:cds	CmaCh03G002380.1:cds_3	CDS
CmaCh03G002380.1:cds	CmaCh03G002380.1:cds_2	CDS
CmaCh03G002380.1:cds	CmaCh03G002380.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh03G002380.1	CmaCh03G002380.1-protein	polypeptide