CmaCh02G016560.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh02G016560.1
TypemRNA
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr02: 9381693 .. 9382672 (+)
Sequence length312
RNA-Seq ExpressionCmaCh02G016560.1
SyntenyCmaCh02G016560.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACACGCGCCAAGAAACGAACTCACTCGATTAGGAGCGGCGAAAGCGACGACGGTAGGGCTTCCAACTTCCGGCGAAGGGGATCGGCTGAAACATTTGCAAATTCTTCTCGGACCTGAGCTCAGAACCTTTCGAATTTGGTAAACGTGAGTTCATCTTCAGGTGCGTCTTAGAAATCGATGGTTGTTGTAGTCTCGAGTTGCATTCCCATAATCTGCTTCCATTCTCCACTTCTCGGAGCTCCTCACATGGCTTCGGTTATAGAGTTTCTATTCTGGTTACATGTGTTCAAAAGCTTGTCTGTAATTTGTGATCTAAGGATGAACACGAAAGAGGTATCATAGGAGCTTCTTAACGTATGCCTAAATTTATAATGTTTGCCTAAATTTTCTATTGTTTGAATTGCGAGTTGCAGTCTTTGTTAGAACTCTGCAAGGAGACGGAAGATTTCATCAGCCAGGGCAAAAGCACTTGGACATATTGTGCAATCCTACTAGAGGTGAGCATTTTCTGTATAGATTCTTGGTTAGTTCAGTCACCTATAGGAGCTTGAGTGAGCTTGATTTCATTTTTGTACTTCGCAAATAATTAGAACCTGTCTGCATTATTTATTTGATTGTTCTTATATTGAAGAACGCCTTGAATTTTTCTCTATTATTCAAGTCTATGAATGTTTATCAGTCAATGAGCTCAGGACAATATATTTGGATTGGTCTGCAAATGAGCTTGATTTTTTCTCTATTATTCAAATCTATTGGTTTCAATAAGAACATCCTTCTTTCACGTCTTGTAATAATTTCATAAGCCAAACCATATCTTTTGATCAAGAACACCTTTTTTCAGGCTATGGGTTTGGATGCTTTAAAAAGTACCTGAAGGAGTCTTATACATCTCTCATTTTAGGGGTGAAAAGAATGCTTACATGCTCAAATTATTCCACAGTTGGTGCAGGCAGCCTACTAAGGAATATGTGCTGA

mRNA sequence

ATGGCACACGCGCCAAGAAACGAACTCACTCGATTAGGAGCGGCGAAAGCGACGACGAACCTTTCGAATTTGGTAAACGTGAGTTCATCTTCAGTCTTTGTTAGAACTCTGCAAGGAGACGGAAGATTTCATCAGCCAGGGCAAAAGCACTTGGACATATTGTGCAATCCTACTAGAGGCTATGGGTTTGGATGCTTTAAAAAGTACCTGAAGGAGTCTTATACATCTCTCATTTTAGGGGTGAAAAGAATGCTTACATGCTCAAATTATTCCACAGTTGGTGCAGGCAGCCTACTAAGGAATATGTGCTGA

Coding sequence (CDS)

ATGGCACACGCGCCAAGAAACGAACTCACTCGATTAGGAGCGGCGAAAGCGACGACGAACCTTTCGAATTTGGTAAACGTGAGTTCATCTTCAGTCTTTGTTAGAACTCTGCAAGGAGACGGAAGATTTCATCAGCCAGGGCAAAAGCACTTGGACATATTGTGCAATCCTACTAGAGGCTATGGGTTTGGATGCTTTAAAAAGTACCTGAAGGAGTCTTATACATCTCTCATTTTAGGGGTGAAAAGAATGCTTACATGCTCAAATTATTCCACAGTTGGTGCAGGCAGCCTACTAAGGAATATGTGCTGA

Protein sequence

MAHAPRNELTRLGAAKATTNLSNLVNVSSSSVFVRTLQGDGRFHQPGQKHLDILCNPTRGYGFGCFKKYLKESYTSLILGVKRMLTCSNYSTVGAGSLLRNMC
Homology
The following BLAST results are available for this feature:
BLAST of CmaCh02G016560.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh02G016560.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmaCh02G016560CmaCh02G016560gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh02G016560.1:exon:1878CmaCh02G016560.1:exon:1878exon
CmaCh02G016560.1:exon:1879CmaCh02G016560.1:exon:1879exon
CmaCh02G016560.1:exon:1880CmaCh02G016560.1:exon:1880exon
CmaCh02G016560.1:exon:1881CmaCh02G016560.1:exon:1881exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh02G016560.1:cdsCmaCh02G016560.1:cdsCDS
CmaCh02G016560.1:cdsCmaCh02G016560.1:cds_2CDS
CmaCh02G016560.1:cdsCmaCh02G016560.1:cds_3CDS
CmaCh02G016560.1:cdsCmaCh02G016560.1:cds_4CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmaCh02G016560.1CmaCh02G016560.1-proteinpolypeptide