CmaCh02G014790.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh02G014790.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	protein IQ-DOMAIN 14-like
Location	Cma_Chr02: 8470456 .. 8473484 (-)
Sequence length	1656
RNA-Seq Expression	CmaCh02G014790.1
Synteny	CmaCh02G014790.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCACTACCCTCCCCTCTTTTGGTCCCATATTTACAATATCATTTCTTCTTCTATTTCCATTCCCATACCTCTCTCTTCAACCTCCCATTTCTTCTTCTTCCTCTTCTCTGAACCCGCCATGGCCCAAACCATTACCAAAACCCACGCCTCCGACCGCCGCCACACCCCTTAAGCCTCTAATGGGCAAAGCCTTCAAATGGTTCCGCAGCCTCCTCGGTCTCAAAAAACCCGACCCACTTACACCCAACAATCCTAATTCCAATAAGCTCAAGCCCAAATGGCACTTCGCCAAATCCTACAAGGACAACACCAAGACCCGTCACCATGACTCCACCGCCTCCAATCCCGACCACCACGCCGTCGCCATCGCTGCCGCCTCCGCTGCAGTTGCCGAAGCCGCCGTCGCCGCCGCTCATGCCGCAGCTGCCGTCGTCAAGCTCACTAATAGTGGACGGTCCGTGCCCAGCATGACGGTTGCCCATGCCTTTCACGAGGCTGAGTGGGCCGCCATCAAAATCCAGGCGGCATTTCGTGGATTTCTGGTTCGTTTTTTATACTCTTCATCTTTTAAAATTTGGTTTAATTCATTTGTAGTGCCAAAAACACCTTGGAAAGAGATTTAAAGTCAAATTTGGAATTCAACCATTTCATTCTCTATTATTTGGTTTAGAATCTCAACTAATAAAATCTCCAACTTTTGACATTGGGATTACCAAAAAGCATCCTTTTTTTCTTTTTTTGTTTTTTTTGTCTTAGCTGTTGGGTGTGGTGCACACTCATAGCTCTCTACTCACTCACAAGTCACATCTCAAATCAAATCAGATTAAATATTAAAAATAATATACAATTTCCAAAAATTAATAAAGCTTTTTACAAAGTGGTTGGACGATTGCTTTCCAATGGGAAACGGGAAGGATTTTCTTACATTGAAACACGAAAGTTTCTTCCGGACGACGTCGTTTTCGTAGTACTGGTTTCCAACTACAAAACGGTGTCGTCTTATCTCTTCATCTGAACACCGCGTGTGACCCTTCCCCTGCAGTTCTGCCACCTGTCACTTTAACTCCCTTTTATTGTAAGGTGGAAGGGAGCTTTCACCATATTGATGCTCTGGATTCTCTCTTCTGTACTTACATTTGTTTATTTATTTATTTTATTTCATTTTTGGAAATTGTTTAAAGAAAAGGAAATGTTCAGATTGTAGATGGTGCTGAGTGTTTGCTATCTTTGTATTCTCTATCTTCAATTTACCCTCTCGACTTTACTTTTTCTTATATCATTTACGAAAAATGTTACTTTTTTCTTCATTTTGATCTCAGAAAAAGCTCTGTCATTTCAAGAAAAGTGATTTTTTATGGTAAAAAACTTAGCTTTCACCTTTTTTAACCCAGACCCAGGTGAAAGTTCTCATCTTTTTAGGAACCCAGTTGAGATATCACAAACCCAAAAGAAAATGAAGCTAGGGGGCTTGTTTTGTTTGGTGGCATAGGTGGATCAGATGTAAGAGATGCCTAGTGGGGTTGGTTCGTCCGGTTTGATGGAAATGGAATTAGGCTCTGTTTGGCTACAGTTTTATGCCATTCTTCTTTTGGATATATGTTTTATGAATATAACATTGTTTGGAAGAAGCTTTGCATATAGGACATTGGGTTGGTTCGGAGTATTTAATGTTGTACTGAACTGTACCAAGTTATGGCATTCTGTAATGTCTGTCTTCTTCATGTTTAGCCAGCTTTTCACTTGAGGAAGTCTTTATGGGAATTAAATACTGATATGATTTCCTTTCAGCCTTTTCCACTTGGGTTTGATTGTTTTTGTCTGTTTCATTTGATGAAGGCAAGGAAGGCATTGAGAGCTCTACGAGGGTTGGTGAAACTTCAGGCTTTGGTTCGAGGCCATATCGAGAGGAAGCGGACAGCTGAATGGATACAGAGGATGCAAGCGTTACTCAGAGCACAGGCACGGGCTCGATCAGGACGGAGTCAATGTTATGAAGTTTCGCATTCGGATATCAAATCGTCTAGTTTCTCTACTCTTGTGAGTTTTGTTTAGTTCCCCATATTGTAGCAGCAGCATCAAACATGGCTGCCTTGGCTAAAGATCTTTTGTTTTGTAGGATCCTGCTACGCCGGAGAAATTTGAACACAGCCCACATACAAGGAGCACTAGGTTTAAACAGATGCAGAGGAGTGGCTCAAGATTTACAACTATTGATGTTGAAAAAATTGATAGAATCCTTGAAATCGAGAATGATAAGACTCAGTTTAAGTTGAAACCCAAGAGCCTCTTTAGCTCCATCAAGCTTGCTCTGTCTTCTGAACTGCCTTCATCAAAAGAGTCTGAAACTCAATGTCCATTTAAATTCTCTCATGAAGTTGAGGAGAGCTCTTTCTTTTCCGTCTCGTCAAGGGGTGCTAGTACGAAGAAAAGCCCGTTCACCCCGACCAAGAGCGACAGTACGAGGAGCTATTTCAGTGGCGACTTGGAGTATCCGAGCTACATGGCCTGTACTGAATCTTCAAGAGCTAAAATGAGATCATATAGTGCTCCGAGACAGCGCCCACAGTACGAGAGATCGAGTTCTGCTAAGCGGGGTTCTGCATATGGCGTTGGGGAATCAAGATTGACTCCACAGCAGGTATCAACATTGCAGTCCAATTTTGTTGGGAAAGCTTATCCTGGTTCAGGTCGACTCGACCAACTCGGTATGCCTGTGGGTTACAGATACTGACGCCGTCTAATATCTCACTTTTCTTACCCCTCTTCTACTTCACAATAGTTGCTTACTTATATCAGTAGTCTTAATAATGAACTTTGAGACCTGAGGTCTGCCAAGTTTTCAATCTTAGAACTAGAAAGACATATCATTGTTCTTAGAATTTTCATGATGGTAGTAATCTATGTTCTGTTCTGTTTCTACTCTATTTTTCACGTATTCGACTCCAAAAAGACAATGATCCCATCTTCCCCAAGTTTCTCTCAAGTTTCTTACAGATATTAGAACAGTTTATCCATGTACGAAACAGGGC

mRNA sequence

CCACTACCCTCCCCTCTTTTGGTCCCATATTTACAATATCATTTCTTCTTCTATTTCCATTCCCATACCTCTCTCTTCAACCTCCCATTTCTTCTTCTTCCTCTTCTCTGAACCCGCCATGGCCCAAACCATTACCAAAACCCACGCCTCCGACCGCCGCCACACCCCTTAAGCCTCTAATGGGCAAAGCCTTCAAATGGTTCCGCAGCCTCCTCGGTCTCAAAAAACCCGACCCACTTACACCCAACAATCCTAATTCCAATAAGCTCAAGCCCAAATGGCACTTCGCCAAATCCTACAAGGACAACACCAAGACCCGTCACCATGACTCCACCGCCTCCAATCCCGACCACCACGCCGTCGCCATCGCTGCCGCCTCCGCTGCAGTTGCCGAAGCCGCCGTCGCCGCCGCTCATGCCGCAGCTGCCGTCGTCAAGCTCACTAATAGTGGACGGTCCGTGCCCAGCATGACGGTTGCCCATGCCTTTCACGAGGCTGAGTGGGCCGCCATCAAAATCCAGGCGGCATTTCGTGGATTTCTGGCAAGGAAGGCATTGAGAGCTCTACGAGGGTTGGTGAAACTTCAGGCTTTGGTTCGAGGCCATATCGAGAGGAAGCGGACAGCTGAATGGATACAGAGGATGCAAGCGTTACTCAGAGCACAGGCACGGGCTCGATCAGGACGGAGTCAATGTTATGAAGTTTCGCATTCGGATATCAAATCGTCTAGTTTCTCTACTCTTGATCCTGCTACGCCGGAGAAATTTGAACACAGCCCACATACAAGGAGCACTAGGTTTAAACAGATGCAGAGGAGTGGCTCAAGATTTACAACTATTGATGTTGAAAAAATTGATAGAATCCTTGAAATCGAGAATGATAAGACTCAGTTTAAGTTGAAACCCAAGAGCCTCTTTAGCTCCATCAAGCTTGCTCTGTCTTCTGAACTGCCTTCATCAAAAGAGTCTGAAACTCAATGTCCATTTAAATTCTCTCATGAAGTTGAGGAGAGCTCTTTCTTTTCCGTCTCGTCAAGGGGTGCTAGTACGAAGAAAAGCCCGTTCACCCCGACCAAGAGCGACAGTACGAGGAGCTATTTCAGTGGCGACTTGGAGTATCCGAGCTACATGGCCTGTACTGAATCTTCAAGAGCTAAAATGAGATCATATAGTGCTCCGAGACAGCGCCCACAGTACGAGAGATCGAGTTCTGCTAAGCGGGGTTCTGCATATGGCGTTGGGGAATCAAGATTGACTCCACAGCAGGTATCAACATTGCAGTCCAATTTTGTTGGGAAAGCTTATCCTGGTTCAGGTCGACTCGACCAACTCGGTATGCCTGTGGGTTACAGATACTGACGCCGTCTAATATCTCACTTTTCTTACCCCTCTTCTACTTCACAATAGTTGCTTACTTATATCAGTAGTCTTAATAATGAACTTTGAGACCTGAGGTCTGCCAAGTTTTCAATCTTAGAACTAGAAAGACATATCATTGTTCTTAGAATTTTCATGATGGTAGTAATCTATGTTCTGTTCTGTTTCTACTCTATTTTTCACGTATTCGACTCCAAAAAGACAATGATCCCATCTTCCCCAAGTTTCTCTCAAGTTTCTTACAGATATTAGAACAGTTTATCCATGTACGAAACAGGGC

Coding sequence (CDS)

ATGGGCAAAGCCTTCAAATGGTTCCGCAGCCTCCTCGGTCTCAAAAAACCCGACCCACTTACACCCAACAATCCTAATTCCAATAAGCTCAAGCCCAAATGGCACTTCGCCAAATCCTACAAGGACAACACCAAGACCCGTCACCATGACTCCACCGCCTCCAATCCCGACCACCACGCCGTCGCCATCGCTGCCGCCTCCGCTGCAGTTGCCGAAGCCGCCGTCGCCGCCGCTCATGCCGCAGCTGCCGTCGTCAAGCTCACTAATAGTGGACGGTCCGTGCCCAGCATGACGGTTGCCCATGCCTTTCACGAGGCTGAGTGGGCCGCCATCAAAATCCAGGCGGCATTTCGTGGATTTCTGGCAAGGAAGGCATTGAGAGCTCTACGAGGGTTGGTGAAACTTCAGGCTTTGGTTCGAGGCCATATCGAGAGGAAGCGGACAGCTGAATGGATACAGAGGATGCAAGCGTTACTCAGAGCACAGGCACGGGCTCGATCAGGACGGAGTCAATGTTATGAAGTTTCGCATTCGGATATCAAATCGTCTAGTTTCTCTACTCTTGATCCTGCTACGCCGGAGAAATTTGAACACAGCCCACATACAAGGAGCACTAGGTTTAAACAGATGCAGAGGAGTGGCTCAAGATTTACAACTATTGATGTTGAAAAAATTGATAGAATCCTTGAAATCGAGAATGATAAGACTCAGTTTAAGTTGAAACCCAAGAGCCTCTTTAGCTCCATCAAGCTTGCTCTGTCTTCTGAACTGCCTTCATCAAAAGAGTCTGAAACTCAATGTCCATTTAAATTCTCTCATGAAGTTGAGGAGAGCTCTTTCTTTTCCGTCTCGTCAAGGGGTGCTAGTACGAAGAAAAGCCCGTTCACCCCGACCAAGAGCGACAGTACGAGGAGCTATTTCAGTGGCGACTTGGAGTATCCGAGCTACATGGCCTGTACTGAATCTTCAAGAGCTAAAATGAGATCATATAGTGCTCCGAGACAGCGCCCACAGTACGAGAGATCGAGTTCTGCTAAGCGGGGTTCTGCATATGGCGTTGGGGAATCAAGATTGACTCCACAGCAGGTATCAACATTGCAGTCCAATTTTGTTGGGAAAGCTTATCCTGGTTCAGGTCGACTCGACCAACTCGGTATGCCTGTGGGTTACAGATACTGA

Protein sequence

MGKAFKWFRSLLGLKKPDPLTPNNPNSNKLKPKWHFAKSYKDNTKTRHHDSTASNPDHHAVAIAAASAAVAEAAVAAAHAAAAVVKLTNSGRSVPSMTVAHAFHEAEWAAIKIQAAFRGFLARKALRALRGLVKLQALVRGHIERKRTAEWIQRMQALLRAQARARSGRSQCYEVSHSDIKSSSFSTLDPATPEKFEHSPHTRSTRFKQMQRSGSRFTTIDVEKIDRILEIENDKTQFKLKPKSLFSSIKLALSSELPSSKESETQCPFKFSHEVEESSFFSVSSRGASTKKSPFTPTKSDSTRSYFSGDLEYPSYMACTESSRAKMRSYSAPRQRPQYERSSSAKRGSAYGVGESRLTPQQVSTLQSNFVGKAYPGSGRLDQLGMPVGYRY

Homology

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BLAST of CmaCh02G014790.1 vs. ExPASy Swiss-Prot
Match: Q2NNE0 (Protein IQ-DOMAIN 22 OS=Arabidopsis thaliana OX=3702 GN=IQD22 PE=1 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 2.3e-61
Identity = 199/488 (40.78%), Postives = 263/488 (53.89%), Query Frame = 0


Query: 1   MGKAFKWFRSLLGLKKPDP-------LTPNNPNSNKLKPKWHFAKSYKDNTKT------- 60
           MGKA +WFRSL G+KKPDP        TP+   S+ LK +W F KS ++   T       
Sbjct: 1   MGKASRWFRSLFGVKKPDPGYPDLSVETPSRSTSSNLKRRWSFVKSKREKESTPINQVPH 60

Query: 61  ------------RHHDST---------------ASNPDHHAVAIAAASAAVAEAAVAAAH 120
                        HH S+               + + D HA+A+AAA+AAVAEAAVAAA+
Sbjct: 61  TPSLPNSTPPPPSHHQSSPRRRRKQKPMWEDEGSEDSDKHAIAVAAATAAVAEAAVAAAN 120

Query: 121 AAAAVVKLTN-SGRSVPSMTVA------------------HAFHEAEWAAIKIQAAFRGF 180
           AAAAVV+LT+ SGRS  S   A                  H     E A IKIQ+ FRG+
Sbjct: 121 AAAAVVRLTSTSGRSTRSPVKARFSDGFDDVVAHGSKFYGHGRDSCELAVIKIQSIFRGY 180

Query: 181 LARKALRALRGLVKLQALVRGHIERKRTAEWIQRMQALLRAQARARSGR----SQCYEVS 240
           LA++ALRAL+GLV+LQA+VRGHIERKR +  ++RM AL+RAQAR R+ R     +     
Sbjct: 181 LAKRALRALKGLVRLQAIVRGHIERKRMSVHLRRMHALVRAQARVRATRVIVTPESSSSQ 240

Query: 241 HSDIKSSSFSTLDPATPEKFEHSPHTRSTRFKQ---MQRSGSR--------------FTT 300
            ++ KSS F    P TPEK EHS  +RS++       +R+GS+              F+ 
Sbjct: 241 SNNTKSSHFQNPGPPTPEKLEHSISSRSSKLAHSHLFKRNGSKASDNNRLYPAHRETFSA 300

Query: 301 IDVEKIDRILEIEND--KTQFKLKPKSLFSSIKLALSSELPSSKESETQCPFKFSHEVEE 360
            D E  ++IL+I+     +  +     +F S  L L +   S     T      SHE   
Sbjct: 301 TDEE--EKILQIDRKHISSYTRRNRPDMFYSSHLILDNAGLSEPVFATPFSPSSSHEEIT 360

Query: 361 SSFFSVS------SRGASTKKSPFTPTK---SDSTRSYFSGDLEYPSYMACTESSRAKMR 393
           S F +        S  + +K+S FT +    SD T+S   GD  +PSYMACTESSRAK R
Sbjct: 361 SQFCTAENSPQLYSATSRSKRSAFTASSIAPSDCTKSCCDGD--HPSYMACTESSRAKAR 420

[Close]

BLAST of CmaCh02G014790.1 vs. ExPASy Swiss-Prot
Match: Q9LYP2 (Protein IQ-DOMAIN 24 OS=Arabidopsis thaliana OX=3702 GN=IQD24 PE=1 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.6e-38
Identity = 149/379 (39.31%), Postives = 207/379 (54.62%), Query Frame = 0


Query: 7   WFRSLLGLKKPDPLTPNNPNSNKLKPKWHFA--KSYKDNTKTRHH-----DSTASNPDHH 66
           +F  L G KK +  TPN       + +W FA   S+ +N  + H      D    N D H
Sbjct: 3   FFGRLFGSKKQEKATPN-------RRRWSFATRSSHPENDSSSHSSKRRGDEDVLNGDKH 62

Query: 67  AVAIAAASAAVAEAAVAAAHAAAAVVKLTNSGR--SVPSMTVAHAFHEAEW-AAIKIQAA 126
           A+A+AAA+AAVAEAA+AAA AAA VV+LTN GR  SV  ++ ++     E+ AA+KIQ+A
Sbjct: 63  AIAVAAATAAVAEAALAAARAAAEVVRLTNGGRNSSVKQISRSNRRWSQEYKAAMKIQSA 122

Query: 127 FRGFLARKALRALRGLVKLQALVRGHIERKRTAEWIQRMQALLRAQARARSGRSQCYEVS 186
           FRG+LAR+ALRAL+ LVKLQALV+GHI RK+TA+ ++RMQ L+R QARAR+ RS     S
Sbjct: 123 FRGYLARRALRALKALVKLQALVKGHIVRKQTADMLRRMQTLVRLQARARASRS-----S 182

Query: 187 HSDIKSSSFSTLDPATPEKF----------------------EHSPHTRSTRFKQMQRSG 246
           H    S   + + P++P+ F                        SP   S    Q +   
Sbjct: 183 HVSDSSHPPTLMIPSSPQSFHARCVSEAEYSKVIAMDHHHNNHRSPMGSSRLLDQWRTEE 242

Query: 247 SRFTTIDV-EKIDRILEIENDKTQFKLKPKSLFSSIKLALSSELPSSKESETQCPFKFSH 306
           S ++     E  D+ILE++  K  F+  P+   S +       +P+S E+  Q   +   
Sbjct: 243 SLWSAPKYNEDDDKILEVDTWKPHFRESPRKRGSLV-------VPTSVENSPQLRSR--- 302

Query: 307 EVEESSFFSVSSRGASTKKSPFTPTKSDSTRSYFSGDLEYPSYMACTESSRAKMRSYSAP 353
                   + SS G S +K+PFTP +S+    Y+SG   +P+YMA TES +AK+RS SAP
Sbjct: 303 --------TGSSSGGSRRKTPFTPARSE--YEYYSG--YHPNYMANTESYKAKVRSQSAP 347

[Close]

BLAST of CmaCh02G014790.1 vs. ExPASy Swiss-Prot
Match: Q9FIT1 (Protein IQ-DOMAIN 23 OS=Arabidopsis thaliana OX=3702 GN=IQD23 PE=1 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 5.0e-32
Identity = 143/378 (37.83%), Postives = 202/378 (53.44%), Query Frame = 0


Query: 7   WFRSLLGLKKPDPLTPNNPNSNKLKPKWHFAKSYKDNTKTRHHDSTAS-------NPDHH 66
           +F  L G KK      +   S++ K +W F     +++K     ++AS       + D H
Sbjct: 3   FFGRLFGSKKKS----DKAASSRDKRRWSFTTRSSNSSKRAPAVTSASVVEQNGLDADKH 62

Query: 67  AVAIAAASAAVAEAAVAAAHAAAAVVKLT--NSGRSVPSMTVAHAFH----EAEW----- 126
           A+A+AAA+AAVAEAA+ AAHAAA VV+LT  N GR+V     +  F        W     
Sbjct: 63  AIAVAAATAAVAEAALTAAHAAAEVVRLTSGNGGRNVGGGGNSSVFQIGRSNRRWAQENI 122

Query: 127 AAIKIQAAFRGFLARKALRALRGLVKLQALVRGHIERKRTAEWIQRMQALLR--AQARAR 186
           AA+KIQ+AFRG+LAR+ALRAL+ LVKLQALVRGHI RK+TA+ ++RMQ L+R  +QARAR
Sbjct: 123 AAMKIQSAFRGYLARRALRALKALVKLQALVRGHIVRKQTADMLRRMQTLVRLQSQARAR 182

Query: 187 SGRSQCYEVSHSDIKSSSFSTLDPATPEKFEHSPHTRSTRFKQM----QRSGSR---FTT 246
           + RS     SHS     S + L   +      S HTR     ++     R GS+   +  
Sbjct: 183 ASRS-----SHSSASFHSSTALLFPSSSSSPRSLHTRCVSNAEVSSLDHRGGSKRLDWQA 242

Query: 247 IDVEKIDRILEIENDKTQFKLKPKSLFSSIKLALSSELPSSKESETQCPFKFSHEVEESS 306
            + E  D+ILE++  K  +  KP      ++   ++E P  ++     P       E S 
Sbjct: 243 EESENGDKILEVDTWKPHYHPKP------LRSERNNESPRKRQQSLLGP----RSTENSP 302

Query: 307 FFSVSSRGASTKKSPFTPTKSDS-----TRSYFSGDLEYPSYMACTESSRAKMRSYSAPR 353
              V S G S +++PFTPT            Y+SG   +P+YMA TES +AK+RS SAP+
Sbjct: 303 --QVGSSG-SRRRTPFTPTSRSEYSWGCNNYYYSG--YHPNYMANTESYKAKVRSQSAPK 356

[Close]

BLAST of CmaCh02G014790.1 vs. ExPASy Swiss-Prot
Match: Q9LK76 (Protein IQ-domain 26 OS=Arabidopsis thaliana OX=3702 GN=IQD26 PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.8e-29
Identity = 140/381 (36.75%), Postives = 195/381 (51.18%), Query Frame = 0


Query: 1   MGKAFKWFRSLLGLKK---PDPLTPNNPNSNKLKPKWHFAKSYKDNTKTRHH-DSTASNP 60
           MG+A +WF+ + G+KK    +     +          H      D+   R +   T    
Sbjct: 1   MGRAARWFKGIFGMKKSKEKENCVSGDVGGEAGGSNIHRKVLQADSVWLRTYLAETDKEQ 60

Query: 61  DHHAVAIAAASAAVAEAAVAAAHAAAAVVKLTNSGRSVPSMTVAHAFHEAEWAAIKIQAA 120
           + HA+A+AAA+AA A+AAVAAA AA AVV+LT++GRS      A       WAA+KIQ+ 
Sbjct: 61  NKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSNGRSGGYSGNA----MERWAAVKIQSV 120

Query: 121 FRGFLARKALRALRGLVKLQALVRGHIERKRTAEWIQRMQALLRAQARARSGRSQCYEVS 180
           F+G+LARKALRAL+GLVKLQALVRG++ RKR AE +  MQAL+RAQ   RS R     + 
Sbjct: 121 FKGYLARKALRALKGLVKLQALVRGYLVRKRAAETLHSMQALIRAQTSVRSQRINRNNMF 180

Query: 181 HSDIKSSSFSTLDPATPEKFEHSPHTRSTRFKQMQRSGSRFTTIDVEKIDRILEIENDKT 240
           H      S   LD +  E   HS     +  KQ   + + +     E   +I+EI+  KT
Sbjct: 181 H---PRHSLERLDDSRSE--IHSKRISISVEKQSNHNNNAYD----ETSPKIVEIDTYKT 240

Query: 241 QFKLKPKSLFSSIKLALSSELPSSKESETQCP---FKFSHEVEESSFFSVSSRGASTKKS 300
             K + K +  ++       +  +K+ E   P    KF    + +  FS S    +   +
Sbjct: 241 --KSRSKRMNVAVSECGDDFIYQAKDFEWSFPGEKCKFP-TAQNTPRFSSSMANNNYYYT 300

Query: 301 PFTPTKSDSTRSYFSGD---LEYPSYMACTESSRAKMRSYSAPRQRPQYERSS----SAK 360
           P +P KS    + F      L  PSYMA T+S +AK+RS+SAPRQRP  +R S     A 
Sbjct: 301 PPSPAKSVCRDACFRPSYPGLMTPSYMANTQSFKAKVRSHSAPRQRPDRKRLSLDEIMAA 360

Query: 361 RGSAYGVGESRLTPQQVSTLQ 368
           R S  GV   +  PQ  +  Q
Sbjct: 361 RSSVSGVRMVQPQPQPQTQTQ 365

[Close]

BLAST of CmaCh02G014790.1 vs. ExPASy Swiss-Prot
Match: Q9ZU28 (Protein IQ-DOMAIN 27 OS=Arabidopsis thaliana OX=3702 GN=IQD27 PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.3e-21
Identity = 125/390 (32.05%), Postives = 180/390 (46.15%), Query Frame = 0


Query: 1   MGKAFKWFRSLLGLKKPDPLTPNNPNSNKLKPKWHFAKSYKDNTKTRHHD---------- 60
           MG+A +WF+ + G KK              K + H   S  D+ K   H           
Sbjct: 1   MGRAARWFKGMFGTKKS-------------KDRSHV--SGGDSVKGGDHSGDFNVPRDSV 60

Query: 61  -------STASNPDHHAVAIAAASAAVAEAAVAAAHAAAAVVKLTNSGRSVPSMTVAHAF 120
                   T  + + +A+A+A A+A  A+AAV     +AAVV+LT+ GR+   +      
Sbjct: 61  LLGTILTDTEKDQNKNAIAVATATATAADAAV-----SAAVVRLTSEGRAGDIIIT---- 120

Query: 121 HEAEWAAIKIQAAFRGFLARKALRALRGLVKLQALVRGHIERKRTAEWIQRMQALLRAQA 180
            E  WAA+KIQ  FRG LARKALRAL+G+VKLQALVRG++ RKR A  +Q +Q L+R Q 
Sbjct: 121 KEERWAAVKIQKVFRGSLARKALRALKGIVKLQALVRGYLVRKRAAAMLQSIQTLIRVQT 180

Query: 181 RARS---GRSQCYEVSHSDIKSSSFSTLDPATPEKFEHSPHTRSTRFKQMQRSGSRFTTI 240
             RS    RS   E ++      SF   D AT +        +  R+  M+RS SR  + 
Sbjct: 181 AMRSKRINRSLNKEYNNMFQPRQSFDKFDEATFDDRRTKIVEKDDRY--MRRSSSRSRSR 240

Query: 241 DVEKIDRILEIENDKTQFKLKPKSLFSSIKLALSSELPSSKESETQCPFKFSHEVEESSF 300
            V  +  + + E D   F  K   L    +L  S E      ++   P    H    + +
Sbjct: 241 QVHNVVSMSDYEGD---FVYKGNDL----ELCFSDEKWKFATAQ-NTPRLLHHHSANNRY 300

Query: 301 FSVSSRGASTKKSPFTPTKSDSTRSY--FSGDLEYPSYMACTESSRAKMRSYSAPRQRPQ 360
           + + S           P KS   ++   +   +  P YM  T+S +AK+RS+SAPRQR +
Sbjct: 301 YVMQS-----------PAKSVGGKALCDYESSVSTPGYMEKTKSFKAKVRSHSAPRQRSE 345

Query: 361 YERSS----SAKRGSAYGVGESRLTPQQVS 365
            +R S     A + S  GV  S   P + S
Sbjct: 361 RQRLSLDEVMASKSSVSGVSMSHQHPPRHS 345

[Close]

BLAST of CmaCh02G014790.1 vs. TAIR 10
Match: AT4G23060.1 (IQ-domain 22 )

HSP 1 Score: 237.7 bits (605), Expect = 1.6e-62
Identity = 199/488 (40.78%), Postives = 263/488 (53.89%), Query Frame = 0


Query: 1   MGKAFKWFRSLLGLKKPDP-------LTPNNPNSNKLKPKWHFAKSYKDNTKT------- 60
           MGKA +WFRSL G+KKPDP        TP+   S+ LK +W F KS ++   T       
Sbjct: 1   MGKASRWFRSLFGVKKPDPGYPDLSVETPSRSTSSNLKRRWSFVKSKREKESTPINQVPH 60

Query: 61  ------------RHHDST---------------ASNPDHHAVAIAAASAAVAEAAVAAAH 120
                        HH S+               + + D HA+A+AAA+AAVAEAAVAAA+
Sbjct: 61  TPSLPNSTPPPPSHHQSSPRRRRKQKPMWEDEGSEDSDKHAIAVAAATAAVAEAAVAAAN 120

Query: 121 AAAAVVKLTN-SGRSVPSMTVA------------------HAFHEAEWAAIKIQAAFRGF 180
           AAAAVV+LT+ SGRS  S   A                  H     E A IKIQ+ FRG+
Sbjct: 121 AAAAVVRLTSTSGRSTRSPVKARFSDGFDDVVAHGSKFYGHGRDSCELAVIKIQSIFRGY 180

Query: 181 LARKALRALRGLVKLQALVRGHIERKRTAEWIQRMQALLRAQARARSGR----SQCYEVS 240
           LA++ALRAL+GLV+LQA+VRGHIERKR +  ++RM AL+RAQAR R+ R     +     
Sbjct: 181 LAKRALRALKGLVRLQAIVRGHIERKRMSVHLRRMHALVRAQARVRATRVIVTPESSSSQ 240

Query: 241 HSDIKSSSFSTLDPATPEKFEHSPHTRSTRFKQ---MQRSGSR--------------FTT 300
            ++ KSS F    P TPEK EHS  +RS++       +R+GS+              F+ 
Sbjct: 241 SNNTKSSHFQNPGPPTPEKLEHSISSRSSKLAHSHLFKRNGSKASDNNRLYPAHRETFSA 300

Query: 301 IDVEKIDRILEIEND--KTQFKLKPKSLFSSIKLALSSELPSSKESETQCPFKFSHEVEE 360
            D E  ++IL+I+     +  +     +F S  L L +   S     T      SHE   
Sbjct: 301 TDEE--EKILQIDRKHISSYTRRNRPDMFYSSHLILDNAGLSEPVFATPFSPSSSHEEIT 360

Query: 361 SSFFSVS------SRGASTKKSPFTPTK---SDSTRSYFSGDLEYPSYMACTESSRAKMR 393
           S F +        S  + +K+S FT +    SD T+S   GD  +PSYMACTESSRAK R
Sbjct: 361 SQFCTAENSPQLYSATSRSKRSAFTASSIAPSDCTKSCCDGD--HPSYMACTESSRAKAR 420

[Close]

BLAST of CmaCh02G014790.1 vs. TAIR 10
Match: AT5G07240.1 (IQ-domain 24 )

HSP 1 Score: 161.8 bits (408), Expect = 1.1e-39
Identity = 149/379 (39.31%), Postives = 207/379 (54.62%), Query Frame = 0


Query: 7   WFRSLLGLKKPDPLTPNNPNSNKLKPKWHFA--KSYKDNTKTRHH-----DSTASNPDHH 66
           +F  L G KK +  TPN       + +W FA   S+ +N  + H      D    N D H
Sbjct: 3   FFGRLFGSKKQEKATPN-------RRRWSFATRSSHPENDSSSHSSKRRGDEDVLNGDKH 62

Query: 67  AVAIAAASAAVAEAAVAAAHAAAAVVKLTNSGR--SVPSMTVAHAFHEAEW-AAIKIQAA 126
           A+A+AAA+AAVAEAA+AAA AAA VV+LTN GR  SV  ++ ++     E+ AA+KIQ+A
Sbjct: 63  AIAVAAATAAVAEAALAAARAAAEVVRLTNGGRNSSVKQISRSNRRWSQEYKAAMKIQSA 122

Query: 127 FRGFLARKALRALRGLVKLQALVRGHIERKRTAEWIQRMQALLRAQARARSGRSQCYEVS 186
           FRG+LAR+ALRAL+ LVKLQALV+GHI RK+TA+ ++RMQ L+R QARAR+ RS     S
Sbjct: 123 FRGYLARRALRALKALVKLQALVKGHIVRKQTADMLRRMQTLVRLQARARASRS-----S 182

Query: 187 HSDIKSSSFSTLDPATPEKF----------------------EHSPHTRSTRFKQMQRSG 246
           H    S   + + P++P+ F                        SP   S    Q +   
Sbjct: 183 HVSDSSHPPTLMIPSSPQSFHARCVSEAEYSKVIAMDHHHNNHRSPMGSSRLLDQWRTEE 242

Query: 247 SRFTTIDV-EKIDRILEIENDKTQFKLKPKSLFSSIKLALSSELPSSKESETQCPFKFSH 306
           S ++     E  D+ILE++  K  F+  P+   S +       +P+S E+  Q   +   
Sbjct: 243 SLWSAPKYNEDDDKILEVDTWKPHFRESPRKRGSLV-------VPTSVENSPQLRSR--- 302

Query: 307 EVEESSFFSVSSRGASTKKSPFTPTKSDSTRSYFSGDLEYPSYMACTESSRAKMRSYSAP 353
                   + SS G S +K+PFTP +S+    Y+SG   +P+YMA TES +AK+RS SAP
Sbjct: 303 --------TGSSSGGSRRKTPFTPARSE--YEYYSG--YHPNYMANTESYKAKVRSQSAP 347

[Close]

BLAST of CmaCh02G014790.1 vs. TAIR 10
Match: AT5G62070.1 (IQ-domain 23 )

HSP 1 Score: 140.2 bits (352), Expect = 3.5e-33
Identity = 143/378 (37.83%), Postives = 202/378 (53.44%), Query Frame = 0


Query: 7   WFRSLLGLKKPDPLTPNNPNSNKLKPKWHFAKSYKDNTKTRHHDSTAS-------NPDHH 66
           +F  L G KK      +   S++ K +W F     +++K     ++AS       + D H
Sbjct: 3   FFGRLFGSKKKS----DKAASSRDKRRWSFTTRSSNSSKRAPAVTSASVVEQNGLDADKH 62

Query: 67  AVAIAAASAAVAEAAVAAAHAAAAVVKLT--NSGRSVPSMTVAHAFH----EAEW----- 126
           A+A+AAA+AAVAEAA+ AAHAAA VV+LT  N GR+V     +  F        W     
Sbjct: 63  AIAVAAATAAVAEAALTAAHAAAEVVRLTSGNGGRNVGGGGNSSVFQIGRSNRRWAQENI 122

Query: 127 AAIKIQAAFRGFLARKALRALRGLVKLQALVRGHIERKRTAEWIQRMQALLR--AQARAR 186
           AA+KIQ+AFRG+LAR+ALRAL+ LVKLQALVRGHI RK+TA+ ++RMQ L+R  +QARAR
Sbjct: 123 AAMKIQSAFRGYLARRALRALKALVKLQALVRGHIVRKQTADMLRRMQTLVRLQSQARAR 182

Query: 187 SGRSQCYEVSHSDIKSSSFSTLDPATPEKFEHSPHTRSTRFKQM----QRSGSR---FTT 246
           + RS     SHS     S + L   +      S HTR     ++     R GS+   +  
Sbjct: 183 ASRS-----SHSSASFHSSTALLFPSSSSSPRSLHTRCVSNAEVSSLDHRGGSKRLDWQA 242

Query: 247 IDVEKIDRILEIENDKTQFKLKPKSLFSSIKLALSSELPSSKESETQCPFKFSHEVEESS 306
            + E  D+ILE++  K  +  KP      ++   ++E P  ++     P       E S 
Sbjct: 243 EESENGDKILEVDTWKPHYHPKP------LRSERNNESPRKRQQSLLGP----RSTENSP 302

Query: 307 FFSVSSRGASTKKSPFTPTKSDS-----TRSYFSGDLEYPSYMACTESSRAKMRSYSAPR 353
              V S G S +++PFTPT            Y+SG   +P+YMA TES +AK+RS SAP+
Sbjct: 303 --QVGSSG-SRRRTPFTPTSRSEYSWGCNNYYYSG--YHPNYMANTESYKAKVRSQSAPK 356

[Close]

BLAST of CmaCh02G014790.1 vs. TAIR 10
Match: AT3G16490.1 (IQ-domain 26 )

HSP 1 Score: 131.7 bits (330), Expect = 1.3e-30
Identity = 140/381 (36.75%), Postives = 195/381 (51.18%), Query Frame = 0


Query: 1   MGKAFKWFRSLLGLKK---PDPLTPNNPNSNKLKPKWHFAKSYKDNTKTRHH-DSTASNP 60
           MG+A +WF+ + G+KK    +     +          H      D+   R +   T    
Sbjct: 1   MGRAARWFKGIFGMKKSKEKENCVSGDVGGEAGGSNIHRKVLQADSVWLRTYLAETDKEQ 60

Query: 61  DHHAVAIAAASAAVAEAAVAAAHAAAAVVKLTNSGRSVPSMTVAHAFHEAEWAAIKIQAA 120
           + HA+A+AAA+AA A+AAVAAA AA AVV+LT++GRS      A       WAA+KIQ+ 
Sbjct: 61  NKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSNGRSGGYSGNA----MERWAAVKIQSV 120

Query: 121 FRGFLARKALRALRGLVKLQALVRGHIERKRTAEWIQRMQALLRAQARARSGRSQCYEVS 180
           F+G+LARKALRAL+GLVKLQALVRG++ RKR AE +  MQAL+RAQ   RS R     + 
Sbjct: 121 FKGYLARKALRALKGLVKLQALVRGYLVRKRAAETLHSMQALIRAQTSVRSQRINRNNMF 180

Query: 181 HSDIKSSSFSTLDPATPEKFEHSPHTRSTRFKQMQRSGSRFTTIDVEKIDRILEIENDKT 240
           H      S   LD +  E   HS     +  KQ   + + +     E   +I+EI+  KT
Sbjct: 181 H---PRHSLERLDDSRSE--IHSKRISISVEKQSNHNNNAYD----ETSPKIVEIDTYKT 240

Query: 241 QFKLKPKSLFSSIKLALSSELPSSKESETQCP---FKFSHEVEESSFFSVSSRGASTKKS 300
             K + K +  ++       +  +K+ E   P    KF    + +  FS S    +   +
Sbjct: 241 --KSRSKRMNVAVSECGDDFIYQAKDFEWSFPGEKCKFP-TAQNTPRFSSSMANNNYYYT 300

Query: 301 PFTPTKSDSTRSYFSGD---LEYPSYMACTESSRAKMRSYSAPRQRPQYERSS----SAK 360
           P +P KS    + F      L  PSYMA T+S +AK+RS+SAPRQRP  +R S     A 
Sbjct: 301 PPSPAKSVCRDACFRPSYPGLMTPSYMANTQSFKAKVRSHSAPRQRPDRKRLSLDEIMAA 360

Query: 361 RGSAYGVGESRLTPQQVSTLQ 368
           R S  GV   +  PQ  +  Q
Sbjct: 361 RSSVSGVRMVQPQPQPQTQTQ 365

[Close]

BLAST of CmaCh02G014790.1 vs. TAIR 10
Match: AT1G51960.1 (IQ-domain 27 )

HSP 1 Score: 104.8 bits (260), Expect = 1.7e-22
Identity = 125/390 (32.05%), Postives = 180/390 (46.15%), Query Frame = 0


Query: 1   MGKAFKWFRSLLGLKKPDPLTPNNPNSNKLKPKWHFAKSYKDNTKTRHHD---------- 60
           MG+A +WF+ + G KK              K + H   S  D+ K   H           
Sbjct: 1   MGRAARWFKGMFGTKKS-------------KDRSHV--SGGDSVKGGDHSGDFNVPRDSV 60

Query: 61  -------STASNPDHHAVAIAAASAAVAEAAVAAAHAAAAVVKLTNSGRSVPSMTVAHAF 120
                   T  + + +A+A+A A+A  A+AAV     +AAVV+LT+ GR+   +      
Sbjct: 61  LLGTILTDTEKDQNKNAIAVATATATAADAAV-----SAAVVRLTSEGRAGDIIIT---- 120

Query: 121 HEAEWAAIKIQAAFRGFLARKALRALRGLVKLQALVRGHIERKRTAEWIQRMQALLRAQA 180
            E  WAA+KIQ  FRG LARKALRAL+G+VKLQALVRG++ RKR A  +Q +Q L+R Q 
Sbjct: 121 KEERWAAVKIQKVFRGSLARKALRALKGIVKLQALVRGYLVRKRAAAMLQSIQTLIRVQT 180

Query: 181 RARS---GRSQCYEVSHSDIKSSSFSTLDPATPEKFEHSPHTRSTRFKQMQRSGSRFTTI 240
             RS    RS   E ++      SF   D AT +        +  R+  M+RS SR  + 
Sbjct: 181 AMRSKRINRSLNKEYNNMFQPRQSFDKFDEATFDDRRTKIVEKDDRY--MRRSSSRSRSR 240

Query: 241 DVEKIDRILEIENDKTQFKLKPKSLFSSIKLALSSELPSSKESETQCPFKFSHEVEESSF 300
            V  +  + + E D   F  K   L    +L  S E      ++   P    H    + +
Sbjct: 241 QVHNVVSMSDYEGD---FVYKGNDL----ELCFSDEKWKFATAQ-NTPRLLHHHSANNRY 300

Query: 301 FSVSSRGASTKKSPFTPTKSDSTRSY--FSGDLEYPSYMACTESSRAKMRSYSAPRQRPQ 360
           + + S           P KS   ++   +   +  P YM  T+S +AK+RS+SAPRQR +
Sbjct: 301 YVMQS-----------PAKSVGGKALCDYESSVSTPGYMEKTKSFKAKVRSHSAPRQRSE 345

Query: 361 YERSS----SAKRGSAYGVGESRLTPQQVS 365
            +R S     A + S  GV  S   P + S
Sbjct: 361 RQRLSLDEVMASKSSVSGVSMSHQHPPRHS 345

The following BLAST results are available for this feature:

BLAST of CmaCh02G014790.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2NNE0	2.3e-61	40.78	Protein IQ-DOMAIN 22 OS=Arabidopsis thaliana OX=3702 GN=IQD22 PE=1 SV=1	[more]
Q9LYP2	1.6e-38	39.31	Protein IQ-DOMAIN 24 OS=Arabidopsis thaliana OX=3702 GN=IQD24 PE=1 SV=1	[more]
Q9FIT1	5.0e-32	37.83	Protein IQ-DOMAIN 23 OS=Arabidopsis thaliana OX=3702 GN=IQD23 PE=1 SV=1	[more]
Q9LK76	1.8e-29	36.75	Protein IQ-domain 26 OS=Arabidopsis thaliana OX=3702 GN=IQD26 PE=1 SV=1	[more]
Q9ZU28	2.3e-21	32.05	Protein IQ-DOMAIN 27 OS=Arabidopsis thaliana OX=3702 GN=IQD27 PE=1 SV=1	[more]

BLAST of CmaCh02G014790.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23060.1	1.6e-62	40.78	IQ-domain 22	[more]
AT5G07240.1	1.1e-39	39.31	IQ-domain 24	[more]
AT5G62070.1	3.5e-33	37.83	IQ-domain 23	[more]
AT3G16490.1	1.3e-30	36.75	IQ-domain 26	[more]
AT1G51960.1	1.7e-22	32.05	IQ-domain 27	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000048	IQ motif, EF-hand binding site	SMART	SM00015	iq_5	coord: 105..127 e-value: 3.2E-4 score: 30.0 coord: 128..149 e-value: 110.0 score: 5.0
IPR000048	IQ motif, EF-hand binding site	PFAM	PF00612	IQ	coord: 133..147 e-value: 0.24 score: 11.3 coord: 108..127 e-value: 9.2E-7 score: 28.1
IPR000048	IQ motif, EF-hand binding site	PROSITE	PS50096	IQ	coord: 106..134 score: 10.4749
IPR000048	IQ motif, EF-hand binding site	PROSITE	PS50096	IQ	coord: 130..157 score: 8.3338
IPR025064	Domain of unknown function DUF4005	PFAM	PF13178	DUF4005	coord: 289..349 e-value: 1.5E-10 score: 41.6
None	No IPR available	GENE3D	1.20.5.190		coord: 107..148 e-value: 9.2E-8 score: 33.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..210
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 282..303
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 325..345
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 325..358
None	No IPR available	PANTHER	PTHR32295	IQ-DOMAIN 5-RELATED	coord: 1..387
None	No IPR available	PANTHER	PTHR32295:SF11	CALMODULIN BINDING PROTEIN IQD22	coord: 1..387
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 97..153

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh02G014790	CmaCh02G014790	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh02G014790.1:exon:2452	CmaCh02G014790.1:exon:2452	exon
CmaCh02G014790.1:exon:2451	CmaCh02G014790.1:exon:2451	exon
CmaCh02G014790.1:exon:2450	CmaCh02G014790.1:exon:2450	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh02G014790.1:three_prime_utr	CmaCh02G014790.1:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh02G014790.1:cds	CmaCh02G014790.1:cds_3	CDS
CmaCh02G014790.1:cds	CmaCh02G014790.1:cds_2	CDS
CmaCh02G014790.1:cds	CmaCh02G014790.1:cds	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh02G014790.1:five_prime_utr	CmaCh02G014790.1:five_prime_utr	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh02G014790.1	CmaCh02G014790.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0005516	calmodulin binding