CmaCh02G011920.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh02G011920.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	COP9 signalosome complex subunit 2
Location	Cma_Chr02: 7051384 .. 7056743 (-)
Sequence length	1713
RNA-Seq Expression	CmaCh02G011920.1
Synteny	CmaCh02G011920.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGGGGCTAAGAGGGGTCTCTTTCCCAAATCCAAACGGAAGGATACAGTGAGTGGCCAACGGAACGGATTCGCTAAATTGTTGAGAAAATCTCTCCAAGAACTCCGTCTTTCAGTAGATCGTTCAGTACTCGCCGCTGCTTACTACCGATCGCCTCCGCTCTCCGTCTTCCACTTTGCAATCCAATCTCGCAACCATGGGTTCCGGTCTTTCTTATTCCCTCTCTCGTTATTTCATTGTTTCTTTCTTGGATTCTGCCTTTGTTTAGGTTTTTAGCAAGTTCGACTTCCTGCTGATCGACGCGTTTGCAATGCCTGCCATTTCATTTCCCTTTTTCCTCTTTCTTAATTTGATTCGTTTCTGCGAGTGTAATTAACTTGTTTCAAAGAATTATGCATCATTCATGGTTTGAATTGTTGTCTTACGCATGGAAACCTGGCTTCTTTCATCTTACGCTTGTTCTTGTTTGATGCCCATATAATTAATTTATCTTAATTCGACTTTGTTGTTGTTTCTTCTTCATTTTCTTCTCTCTTGAACACCGCTTGGAAAAGAATTAAGATTTCTTGTGTAGTAATTAATGTCTTAAACCGTATGGGCAGATGCGGATATGGAAGATTATGGTTTTGAATACTCGGACGATGAGCCTGAAGAGCAGGACGTTGATATTGAAAATCAATACTACAATTCTAAAGGTACCGAAATGCTGTCTTCAAGATTTGCAATTACATTCTTTTTTTGTCATATGATGTTTTCCTGTTTTAGATAGCTATTCAATCCAATTCCTGCTCTTCAAAGCCTAGTTTCATAGAACCAATTGCTTCGAGCTTTTGGTGGACACAATGGTTATATAGAACATGGGAATTGTTTGAGCTGTTTGTTTCCCTTCGTTTAATATCCGTTCTTTTAAATATATGGAATTTTAGTTAATGATATCACTTGGGAGTTTGTATAATCGTTCCTATTGCCCGTAATTTTATGGAATTTAATCCAAAAAAATTTATAATTCATCAAGAACTTTTACTTAACACTGTACACAATCTGATTCTTGATTATAATGAAAATTGTTTGGTTTTCCTTGTTCTCCGTATTCATTTTCAATTGATGATAGCCGTATCTTTGTTTTGTTGAAAAGGCAGGAATTTTTGATCTGGCACCCTAGATTCATACAATTATTCAAAACATACTATTTTCTAATTAAAAGAATTGGCTCTCACACCCATGTAAACGTCTCCAGTTTTCTTCTGGAGCTTTTAAATATCTTTTTCTTTGTCTATGTCCTTACGTTTGGACATGATTTGTATCTTTATTATTTACCTCATCTCTATACAATGTTGAATCACTTTTTATGCCTTCCCTTCCTATCAATTTCTTCACAAATAGGTCTGGTTGAAATGGACCCCGAAGGAGCTCTTGCAGGGTTTGCTGAGGTGGTACGCATGGAACCCGAGAAGGCAGAGTGGTAAGTTTGGTATTGATTTCTTTGTTTCTTCTTGCTAGATTCCTGGAAATGGGTTCTAACAGGTTCACTATCCTATAATTTTTCACTCATTCATTTTGGACATTTAAGGTGACTGGCTGTGTTTTATACGTTCTTACAGTAGTGGGGTGCCTAAGTTTAACTTTAATTTTCTAATCAAGCATGTAGTGTAGCTTCTCAAGGACGAGGCTTATATACTTCTGAAAATGGAAAGCTTTGGATCAAAGGAATCCTAATTTCTATTGTCGATTTTGATCTTATATGACTTGGGATTCTTCATAATAGTTAATGTCATGTCCTTTTAGGTTTTTTTCATGACTTGACCACAGCTCATTAGTTGGTCTTAGATATCTTTTTTTGAAAGATTCGATATGTTGCATTCAATCATATATGAAACTACCTTCTCTCTCTACAATCTACCTAGAATTATATCTCGGTTCTAGCTCTGCTGTTGTGACCTTTTGTTTTGTTTTTTTTTTTTTCTTTTCTGGATTTTCTAGGGGCTTCAAGGCTCTCAAGCAAACTGTCAAGCTTTATTATAGACTGGGGAGGTACAAAGAAATGATGGAGTCATATCGAGTGATGCTGACATATATAAAATCGGCAGTGACTCGTAATTATAGTGAGAAATGTATAAACAACATCATGGATTTTGTATCTGGATCAGCAAGTCAGAGCTTTGGTCTCTTGCAAGAATTTTATCAAACCACTTTGAAAGCCCTTGAAGAGGCAAAGAATGAGGTAAGTAAATGATTCTACTTTTACTATCTCATGCATTGTTTAATCATGATGGCTTATGTTCTGTTTCTTCCTTGTGGTGCAGAGGCTTTGGTTCAAAACTAATTTAAAACTCTGCAAAATTTGGTTTGATATTGGTGAATATGGTCGTATGATTAAGGTAACTTTAATTTTCAGGGTTTTATATTTATTCTCATAAAAGAAATTTGTTTGCATATTAAGTGATCTAATTAATTTATTTTCACCTCTAGATTTTGAAGGAACTCCACAAGTCCTGTCAAAGAGAAGATGGTACAGATGATCAAAAGAAAGGAAGTCAACTGCTGGAGGTATATGCAATTGAGATTCAGATGTATACAGAGACTAAAAATAACAAAAAGCTCAAGGTATTGATTCTCTACCATTCTTGTTCATTCCATTCTTAGTTCAGTGATTTTAAAAGACCAAGCACCCGCACCACCACTCTGAAGTACAATTCCTTTGCAGCCAACTTTCCTCTAAAATCAATGTAATAGTATTAACCTTTACCTCTGAAAGGGTTCGTAGCTTTTTGGCTTTGGTTGTATAAAATTCAGCCATTCCTACACATCCCAGGTTCGAATTAAAAAAGGTATTAGCCCTACCCAAGGAACTTTAATTTCCTTCTTAATCTAGTGAGACATGAAACTGAGGAGAGGAAGCCTTTGAAAGATCTAGGGTAAGACACGGATATAAAGTAGGTATTTTAGTAGCTTGTGGAAGCCCAAGAGAAGAGGGTGCACTGCAGGAAAGGTATTTTAGTCCCTTTGTTCATTGTGCTTGGAACAGGTTGTTTACCTTGATTGGTTTGAATTAGGTGGTTTTTTGTTCTCCAGTGTATCTCTCGGTATATTTGTTTTGCGTCTCTGGAAGCTACAGGCTAGCCATTTGGCGTCATGCAATCAAAACCATCCCTTGGCCAGTTATTTTATTTTATTTTTATTTTTATAAAGCATAATTAGTTGCATATTCTCTTTTCTTTATTGCTATTTGTCTTGGTATGTCATCCCTCTATTTCTATCTAAGATGCCTAGTTGAACTCCCATGAGCTCTTCTTTAGCTGTATAATTGCTTTATTTTGATCTCGAATATTTTTGCCTTGTATTTTCTTGTTATTGTGATGCAGCAATTATACCAGAAAGCTCTTGCAATCAAGTCGGCCATACCCCATCCACGAATTATGGGAATAATTCGGGAGTGTGGAGGAAAGATGCACATGGCAGAGCGTCAGTGGCCAGAAGCAGCTACTGATTTCTTTGAGGCTTTTAAGAACTATGATGAAGCTGGGAACCAAAGGCGTATCCAATGCCTGAAGTATGCCCCCTTTCTGCTTTCCTTTTGTACTTATACCTTGTTACTGCAAGACATTTAAAACAAAACTGAATTTTAGTAAATTTGTACATTGAACTCCTGCATAAAAAATACAACATGAGAACCCTAAACTTCAGCGACCCCATGGCATGCTACGATGCAGAAAGAAAAACGTAGACTATGTTAGGTTTCTGGGGAAGTGGTACAAGATTCATCCCCACCCATTATTTTTAATTGTTTGATTGTGCCCAAAGCATCAAGATGATGAACTAATTTCAAATTTCCATTTTATTTTGACGTTTACTTAGCATTAGAACCTGGCATTTGACTAATGCAATTTAGCCTAGTCAGAATTTGTTTTGTTTTCTACTTCTAATTCCTACTATTACTTGAAACTTGCCCATAGCATTGCCTTAATTGAAGTAACCTTGGAGTATAATTTACTTTTATTATCATTTCCTTTTCCATGTCTATCCTAACAAAATTTGGTGAAATTTAAATCGGGAAATAATTTTTTTCTCATTCTCTTGTGGCATCCACTATTCAAGCAATCAATTTATCTTAATTATTTCTCTTATACCAACTAATCATTCAGTCCCCCTCCAGATATCTAGTTTTGGCTAATATGCTGATGGAATCTGAAGTTAATCCATTTGATGGTCAAGAGGCAAAACCGTAAGTTTCAGCCATTGAATTCTGCTTCAAGTTTCTTTTTGATCTCCCCCTGATATCTAGTTTGCAGGTATAAAAATGACCCCGAGATTTTGGCGATGACCAATCTTATTGCTGCGTACCAAAGGAATGAGATACTTGAGTTTGAGAAAATTCTCAAGGTAACTGTGTGAAGGAGACATATATGTCTGCATAGGAAAACAATAATGTTTGATTTAAATGTTCTTTTCACAGAGCAATAGGAAAACAATAATGGACGATCCATTCATTCGGAATTACATTGAAGATCTGTTGAAGAATGTCAGAACCCAAGTGTTGCTCAAACTTATCAAGCCTTACACAAGAATTCGGATTCCATTTATTTCAAAGGTGACAGCTTTACTTGTGTGTGTGTGTGTCTTTTTCCTGTTCATTTTTTAAACCAACTTGCACAATTTCTTGATAATGCGATGTGGTTGGAACTTACCAAACCTTGCACAACTTGCACAATGTCCTGTGTGTGGAGGTTTCTGAATGCGGTGTTAATTTCCCCACGTCCCAGAAAGAAAAAAGAAAAAACTAAATTTGCTTCTACTTCACCAGGAACTTAATGTGCCGGAGAAAGATGTTGAGCAATTGTTAGTATCACTAATCCTGGATAATCGCATTGATGGCCACATCGATCAAGTCAACCGTCTTTTGGAGCGTGGTGACAGGTATGTTCTTTCCAGCCCCGTTTTTTCAAATGATGCAGAAAAAGTAAGAACATAATGTGAAATTGGTAATCCACCCCACCCCCTGCAGGTCAAAGGGAATGAAGAAGTATACTGCCATAGATAAATGGAACACCCAGTTGAAATCCCTCTATCAAACTGTGAGCAACCGAGTATATTGAGCCTCATTGGATAATCCCGATGGGGAAGTATGTCGATTTTAGCCTCAAACATGGTATGGTTTATCACTTTTTTCACCTTGAGCTTGAACTTGTAATGTGCTATACTAGATTTCTGATGAACCAAACTTAGAATATAATTATACAAGTTCAGACCTGGCATTTTGTTCGGGTATTGTTTGAGCTATGTTCAAGTTAGTTTTGCAACGAAGAATGCATCAAAGATATTCGTGATACCTAGTTGAATAATAAGTGTCTTTTTTTTAA

mRNA sequence

ATGAAGGGGGCTAAGAGGGGTCTCTTTCCCAAATCCAAACGGAAGGATACAATCGTTCAGTACTCGCCGCTGCTTACTACCGATCGCCTCCGCTCTCCGTCTTCCACTTTGCAATCCAATCTCGCAACCATGGGTTCCGATGCGGATATGGAAGATTATGGTTTTGAATACTCGGACGATGAGCCTGAAGAGCAGGACGTTGATATTGAAAATCAATACTACAATTCTAAAGGTCTGGTTGAAATGGACCCCGAAGGAGCTCTTGCAGGGTTTGCTGAGGTGGTACGCATGGAACCCGAGAAGGCAGAGTGGGGCTTCAAGGCTCTCAAGCAAACTGTCAAGCTTTATTATAGACTGGGGAGGTACAAAGAAATGATGGAGTCATATCGAGTGATGCTGACATATATAAAATCGGCAGTGACTCGTAATTATAGTGAGAAATGTATAAACAACATCATGGATTTTGTATCTGGATCAGCAAGTCAGAGCTTTGGTCTCTTGCAAGAATTTTATCAAACCACTTTGAAAGCCCTTGAAGAGGCAAAGAATGAGAGGCTTTGGTTCAAAACTAATTTAAAACTCTGCAAAATTTGGTTTGATATTGGTGAATATGGTCGTATGATTAAGATTTTGAAGGAACTCCACAAGTCCTGTCAAAGAGAAGATGGTACAGATGATCAAAAGAAAGGAAGTCAACTGCTGGAGGTATATGCAATTGAGATTCAGATGTATACAGAGACTAAAAATAACAAAAAGCTCAAGCAATTATACCAGAAAGCTCTTGCAATCAAGTCGGCCATACCCCATCCACGAATTATGGGAATAATTCGGGAGTGTGGAGGAAAGATGCACATGGCAGAGCGTCAGTGGCCAGAAGCAGCTACTGATTTCTTTGAGGCTTTTAAGAACTATGATGAAGCTGGGAACCAAAGGCGTATCCAATGCCTGAAATATCTAGTTTTGGCTAATATGCTGATGGAATCTGAAGTTAATCCATTTGATGGTCAAGAGGCAAAACCGTATAAAAATGACCCCGAGATTTTGGCGATGACCAATCTTATTGCTGCGTACCAAAGGAATGAGATACTTGAGTTTGAGAAAATTCTCAAGAGCAATAGGAAAACAATAATGGACGATCCATTCATTCGGAATTACATTGAAGATCTGTTGAAGAATGTCAGAACCCAAGTGTTGCTCAAACTTATCAAGCCTTACACAAGAATTCGGATTCCATTTATTTCAAAGGAACTTAATGTGCCGGAGAAAGATGTTGAGCAATTGTTAGTATCACTAATCCTGGATAATCGCATTGATGGCCACATCGATCAAGTCAACCGTCTTTTGGAGCGTGGTGACAGGTCAAAGGGAATGAAGAAGTATACTGCCATAGATAAATGGAACACCCAGTTGAAATCCCTCTATCAAACTGTGAGCAACCGAGTATATTGAGCCTCATTGGATAATCCCGATGGGGAAGTATGTCGATTTTAGCCTCAAACATGGTATGGTTTATCACTTTTTTCACCTTGAGCTTGAACTTGTAATGTGCTATACTAGATTTCTGATGAACCAAACTTAGAATATAATTATACAAGTTCAGACCTGGCATTTTGTTCGGGTATTGTTTGAGCTATGTTCAAGTTAGTTTTGCAACGAAGAATGCATCAAAGATATTCGTGATACCTAGTTGAATAATAAGTGTCTTTTTTTTAA

Coding sequence (CDS)

ATGAAGGGGGCTAAGAGGGGTCTCTTTCCCAAATCCAAACGGAAGGATACAATCGTTCAGTACTCGCCGCTGCTTACTACCGATCGCCTCCGCTCTCCGTCTTCCACTTTGCAATCCAATCTCGCAACCATGGGTTCCGATGCGGATATGGAAGATTATGGTTTTGAATACTCGGACGATGAGCCTGAAGAGCAGGACGTTGATATTGAAAATCAATACTACAATTCTAAAGGTCTGGTTGAAATGGACCCCGAAGGAGCTCTTGCAGGGTTTGCTGAGGTGGTACGCATGGAACCCGAGAAGGCAGAGTGGGGCTTCAAGGCTCTCAAGCAAACTGTCAAGCTTTATTATAGACTGGGGAGGTACAAAGAAATGATGGAGTCATATCGAGTGATGCTGACATATATAAAATCGGCAGTGACTCGTAATTATAGTGAGAAATGTATAAACAACATCATGGATTTTGTATCTGGATCAGCAAGTCAGAGCTTTGGTCTCTTGCAAGAATTTTATCAAACCACTTTGAAAGCCCTTGAAGAGGCAAAGAATGAGAGGCTTTGGTTCAAAACTAATTTAAAACTCTGCAAAATTTGGTTTGATATTGGTGAATATGGTCGTATGATTAAGATTTTGAAGGAACTCCACAAGTCCTGTCAAAGAGAAGATGGTACAGATGATCAAAAGAAAGGAAGTCAACTGCTGGAGGTATATGCAATTGAGATTCAGATGTATACAGAGACTAAAAATAACAAAAAGCTCAAGCAATTATACCAGAAAGCTCTTGCAATCAAGTCGGCCATACCCCATCCACGAATTATGGGAATAATTCGGGAGTGTGGAGGAAAGATGCACATGGCAGAGCGTCAGTGGCCAGAAGCAGCTACTGATTTCTTTGAGGCTTTTAAGAACTATGATGAAGCTGGGAACCAAAGGCGTATCCAATGCCTGAAATATCTAGTTTTGGCTAATATGCTGATGGAATCTGAAGTTAATCCATTTGATGGTCAAGAGGCAAAACCGTATAAAAATGACCCCGAGATTTTGGCGATGACCAATCTTATTGCTGCGTACCAAAGGAATGAGATACTTGAGTTTGAGAAAATTCTCAAGAGCAATAGGAAAACAATAATGGACGATCCATTCATTCGGAATTACATTGAAGATCTGTTGAAGAATGTCAGAACCCAAGTGTTGCTCAAACTTATCAAGCCTTACACAAGAATTCGGATTCCATTTATTTCAAAGGAACTTAATGTGCCGGAGAAAGATGTTGAGCAATTGTTAGTATCACTAATCCTGGATAATCGCATTGATGGCCACATCGATCAAGTCAACCGTCTTTTGGAGCGTGGTGACAGGTCAAAGGGAATGAAGAAGTATACTGCCATAGATAAATGGAACACCCAGTTGAAATCCCTCTATCAAACTGTGAGCAACCGAGTATATTGA

Protein sequence

MKGAKRGLFPKSKRKDTIVQYSPLLTTDRLRSPSSTLQSNLATMGSDADMEDYGFEYSDDEPEEQDVDIENQYYNSKGLVEMDPEGALAGFAEVVRMEPEKAEWGFKALKQTVKLYYRLGRYKEMMESYRVMLTYIKSAVTRNYSEKCINNIMDFVSGSASQSFGLLQEFYQTTLKALEEAKNERLWFKTNLKLCKIWFDIGEYGRMIKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWPEAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEILEFEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKYTAIDKWNTQLKSLYQTVSNRVY

Homology

[Close]

BLAST of CmaCh02G011920.1 vs. ExPASy Swiss-Prot
Match: Q8W207 (COP9 signalosome complex subunit 2 OS=Arabidopsis thaliana OX=3702 GN=CSN2 PE=1 SV=1)

HSP 1 Score: 770.8 bits (1989), Expect = 9.3e-222
Identity = 383/438 (87.44%), Postives = 411/438 (93.84%), Query Frame = 0


Query: 44  MGSDADMEDYGFEYSDDEPEEQDVDIENQYYNSKGLVEMDPEGALAGFAEVVRMEPEKAE 103
           M SDADMEDYGFEYSD+E EEQDVDIENQYYNSKG+VE +PE AL+GFAEVV+MEPEKA+
Sbjct: 1   MASDADMEDYGFEYSDEEQEEQDVDIENQYYNSKGMVETEPEEALSGFAEVVQMEPEKAD 60

Query: 104 WGFKALKQTVKLYYRLGRYKEMMESYRVMLTYIKSAVTRNYSEKCINNIMDFVSGSASQS 163
           WGFKALKQTVK+YYRLG+YKEMME+Y  MLTYIKSAVTRNYSEKCINNIMDFVSGSASQ+
Sbjct: 61  WGFKALKQTVKIYYRLGKYKEMMEAYTEMLTYIKSAVTRNYSEKCINNIMDFVSGSASQN 120

Query: 164 FGLLQEFYQTTLKALEEAKNERLWFKTNLKLCKIWFDIGEYGRMIKILKELHKSCQREDG 223
            GLLQEFYQTTLKALEEAKNERLWFKTNLKLC IWFDIGEY RM KILKELHKSCQ+EDG
Sbjct: 121 TGLLQEFYQTTLKALEEAKNERLWFKTNLKLCNIWFDIGEYRRMTKILKELHKSCQKEDG 180

Query: 224 TDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKM 283
           TDDQKKGSQLLEVYAIEIQ+YTETK+NKKLKQLY KALAIKSAIPHPRIMGIIRECGGKM
Sbjct: 181 TDDQKKGSQLLEVYAIEIQIYTETKDNKKLKQLYHKALAIKSAIPHPRIMGIIRECGGKM 240

Query: 284 HMAERQWPEAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKN 343
           HMAERQW EAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKN
Sbjct: 241 HMAERQWEEAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKN 300

Query: 344 DPEILAMTNLIAAYQRNEILEFEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIK 403
           DPEILAMTNLIAAYQRNEI+EFE+ILKSNR+TIMDDPFIRNY+EDLLK VRTQVLLKLIK
Sbjct: 301 DPEILAMTNLIAAYQRNEIIEFERILKSNRRTIMDDPFIRNYMEDLLKKVRTQVLLKLIK 360

Query: 404 PYTRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKYTAI 463
           PYT+I IPFISKELNVPE DV +LLVSLILD+RIDGHID++NR L RGD   G K + A+
Sbjct: 361 PYTKIGIPFISKELNVPETDVTELLVSLILDSRIDGHIDEMNRYLLRGDSGNGRKLHKAV 420

Query: 464 DKWNTQLKSLYQTVSNRV 482
           DKWN+QLKSL   +++RV
Sbjct: 421 DKWNSQLKSLSSNITSRV 438

[Close]

BLAST of CmaCh02G011920.1 vs. ExPASy Swiss-Prot
Match: Q6IR75 (COP9 signalosome complex subunit 2 (Fragment) OS=Xenopus laevis OX=8355 GN=csn2 PE=2 SV=1)

HSP 1 Score: 579.3 bits (1492), Expect = 4.0e-164
Identity = 285/433 (65.82%), Postives = 351/433 (81.06%), Query Frame = 0


Query: 49  DMEDYGFEYSDDEPEEQDVDIENQYYNSKGLVEMDPEGALAGFAEVVRMEPEKAEWGFKA 108
           D EDY  EYS+D   E +VD+ENQYYNSK L E DP+ AL+ F +V+ +E EK EWGFKA
Sbjct: 10  DEEDYDLEYSEDSNSEPNVDLENQYYNSKALKEDDPKAALSSFQKVLELEGEKGEWGFKA 69

Query: 109 LKQTVKLYYRLGRYKEMMESYRVMLTYIKSAVTRNYSEKCINNIMDFVSGSASQSFGLLQ 168
           LKQ +K+ ++LG Y EMM  Y+ +LTYI+SAVTRNYSEK IN+I+D++  S S+   LLQ
Sbjct: 70  LKQMIKINFKLGNYPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYI--STSKQMDLLQ 129

Query: 169 EFYQTTLKALEEAKNERLWFKTNLKLCKIWFDIGEYGRMIKILKELHKSCQREDGTDDQK 228
           EFY+TTL AL++AKN+RLWFKTN KL K++ +  EYG++ KIL++LH+SCQ +DG DD K
Sbjct: 130 EFYETTLDALKDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDGEDDLK 189

Query: 229 KGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAER 288
           KG+QLLE+YA+EIQMYT  KNNKKLK LY+++L IKSAIPHP IMG+IRECGGKMH+ E 
Sbjct: 190 KGTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREG 249

Query: 289 QWPEAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEIL 348
           ++ +A TDFFEAFKNYDE+G+ RR  CLKYLVLANMLM+S +NPFD QEAKPYKNDPEIL
Sbjct: 250 EFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLMKSGINPFDSQEAKPYKNDPEIL 309

Query: 349 AMTNLIAAYQRNEILEFEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRI 408
           AMTNL++AYQ N+I EFEKILK+N   IMDDPFIR +IE+LL+N+RTQVL+KLIKPYTRI
Sbjct: 310 AMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRI 369

Query: 409 RIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKYTAIDKWNT 468
            IPFISKELN+   DVE LLV  ILDN I G IDQVN+LLE   + +G  +YTA+DKW  
Sbjct: 370 HIPFISKELNIDVADVESLLVQCILDNTIHGRIDQVNQLLELDHQKRGGARYTALDKWTN 429

Query: 469 QLKSLYQTVSNRV 482
           QL SL Q V +++
Sbjct: 430 QLNSLNQAVVSKL 440

[Close]

BLAST of CmaCh02G011920.1 vs. ExPASy Swiss-Prot
Match: P61201 (COP9 signalosome complex subunit 2 OS=Homo sapiens OX=9606 GN=COPS2 PE=1 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 5.7e-163
Identity = 283/433 (65.36%), Postives = 351/433 (81.06%), Query Frame = 0


Query: 49  DMEDYGFEYSDDEPEEQDVDIENQYYNSKGLVEMDPEGALAGFAEVVRMEPEKAEWGFKA 108
           D EDY  EYS+D   E +VD+ENQYYNSK L E DP+ AL+ F +V+ +E EK EWGFKA
Sbjct: 12  DEEDYDLEYSEDSNSEPNVDLENQYYNSKALKEDDPKAALSSFQKVLELEGEKGEWGFKA 71

Query: 109 LKQTVKLYYRLGRYKEMMESYRVMLTYIKSAVTRNYSEKCINNIMDFVSGSASQSFGLLQ 168
           LKQ +K+ ++L  + EMM  Y+ +LTYI+SAVTRNYSEK IN+I+D++  S S+   LLQ
Sbjct: 72  LKQMIKINFKLTNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYI--STSKQMDLLQ 131

Query: 169 EFYQTTLKALEEAKNERLWFKTNLKLCKIWFDIGEYGRMIKILKELHKSCQREDGTDDQK 228
           EFY+TTL+AL++AKN+RLWFKTN KL K++ +  EYG++ KIL++LH+SCQ +DG DD K
Sbjct: 132 EFYETTLEALKDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDGEDDLK 191

Query: 229 KGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAER 288
           KG+QLLE+YA+EIQMYT  KNNKKLK LY+++L IKSAIPHP IMG+IRECGGKMH+ E 
Sbjct: 192 KGTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREG 251

Query: 289 QWPEAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEIL 348
           ++ +A TDFFEAFKNYDE+G+ RR  CLKYLVLANMLM+S +NPFD QEAKPYKNDPEIL
Sbjct: 252 EFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLMKSGINPFDSQEAKPYKNDPEIL 311

Query: 349 AMTNLIAAYQRNEILEFEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRI 408
           AMTNL++AYQ N+I EFEKILK+N   IMDDPFIR +IE+LL+N+RTQVL+KLIKPYTRI
Sbjct: 312 AMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRI 371

Query: 409 RIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKYTAIDKWNT 468
            IPFISKELN+   DVE LLV  ILDN I G IDQVN+LLE   + +G  +YTA+DKW  
Sbjct: 372 HIPFISKELNIDVADVESLLVQCILDNTIHGRIDQVNQLLELDHQKRGGARYTALDKWTN 431

Query: 469 QLKSLYQTVSNRV 482
           QL SL Q V +++
Sbjct: 432 QLNSLNQAVVSKL 442

[Close]

BLAST of CmaCh02G011920.1 vs. ExPASy Swiss-Prot
Match: P61202 (COP9 signalosome complex subunit 2 OS=Mus musculus OX=10090 GN=Cops2 PE=1 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 5.7e-163
Identity = 283/433 (65.36%), Postives = 351/433 (81.06%), Query Frame = 0


Query: 49  DMEDYGFEYSDDEPEEQDVDIENQYYNSKGLVEMDPEGALAGFAEVVRMEPEKAEWGFKA 108
           D EDY  EYS+D   E +VD+ENQYYNSK L E DP+ AL+ F +V+ +E EK EWGFKA
Sbjct: 12  DEEDYDLEYSEDSNSEPNVDLENQYYNSKALKEDDPKAALSSFQKVLELEGEKGEWGFKA 71

Query: 109 LKQTVKLYYRLGRYKEMMESYRVMLTYIKSAVTRNYSEKCINNIMDFVSGSASQSFGLLQ 168
           LKQ +K+ ++L  + EMM  Y+ +LTYI+SAVTRNYSEK IN+I+D++  S S+   LLQ
Sbjct: 72  LKQMIKINFKLTNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYI--STSKQMDLLQ 131

Query: 169 EFYQTTLKALEEAKNERLWFKTNLKLCKIWFDIGEYGRMIKILKELHKSCQREDGTDDQK 228
           EFY+TTL+AL++AKN+RLWFKTN KL K++ +  EYG++ KIL++LH+SCQ +DG DD K
Sbjct: 132 EFYETTLEALKDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDGEDDLK 191

Query: 229 KGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAER 288
           KG+QLLE+YA+EIQMYT  KNNKKLK LY+++L IKSAIPHP IMG+IRECGGKMH+ E 
Sbjct: 192 KGTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREG 251

Query: 289 QWPEAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEIL 348
           ++ +A TDFFEAFKNYDE+G+ RR  CLKYLVLANMLM+S +NPFD QEAKPYKNDPEIL
Sbjct: 252 EFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLMKSGINPFDSQEAKPYKNDPEIL 311

Query: 349 AMTNLIAAYQRNEILEFEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRI 408
           AMTNL++AYQ N+I EFEKILK+N   IMDDPFIR +IE+LL+N+RTQVL+KLIKPYTRI
Sbjct: 312 AMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRI 371

Query: 409 RIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKYTAIDKWNT 468
            IPFISKELN+   DVE LLV  ILDN I G IDQVN+LLE   + +G  +YTA+DKW  
Sbjct: 372 HIPFISKELNIDVADVESLLVQCILDNTIHGRIDQVNQLLELDHQKRGGARYTALDKWTN 431

Query: 469 QLKSLYQTVSNRV 482
           QL SL Q V +++
Sbjct: 432 QLNSLNQAVVSKL 442

[Close]

BLAST of CmaCh02G011920.1 vs. ExPASy Swiss-Prot
Match: P61203 (COP9 signalosome complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Cops2 PE=1 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 5.7e-163
Identity = 283/433 (65.36%), Postives = 351/433 (81.06%), Query Frame = 0


Query: 49  DMEDYGFEYSDDEPEEQDVDIENQYYNSKGLVEMDPEGALAGFAEVVRMEPEKAEWGFKA 108
           D EDY  EYS+D   E +VD+ENQYYNSK L E DP+ AL+ F +V+ +E EK EWGFKA
Sbjct: 12  DEEDYDLEYSEDSNSEPNVDLENQYYNSKALKEDDPKAALSSFQKVLELEGEKGEWGFKA 71

Query: 109 LKQTVKLYYRLGRYKEMMESYRVMLTYIKSAVTRNYSEKCINNIMDFVSGSASQSFGLLQ 168
           LKQ +K+ ++L  + EMM  Y+ +LTYI+SAVTRNYSEK IN+I+D++  S S+   LLQ
Sbjct: 72  LKQMIKINFKLTNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYI--STSKQMDLLQ 131

Query: 169 EFYQTTLKALEEAKNERLWFKTNLKLCKIWFDIGEYGRMIKILKELHKSCQREDGTDDQK 228
           EFY+TTL+AL++AKN+RLWFKTN KL K++ +  EYG++ KIL++LH+SCQ +DG DD K
Sbjct: 132 EFYETTLEALKDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDGEDDLK 191

Query: 229 KGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAER 288
           KG+QLLE+YA+EIQMYT  KNNKKLK LY+++L IKSAIPHP IMG+IRECGGKMH+ E 
Sbjct: 192 KGTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREG 251

Query: 289 QWPEAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEIL 348
           ++ +A TDFFEAFKNYDE+G+ RR  CLKYLVLANMLM+S +NPFD QEAKPYKNDPEIL
Sbjct: 252 EFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLMKSGINPFDSQEAKPYKNDPEIL 311

Query: 349 AMTNLIAAYQRNEILEFEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRI 408
           AMTNL++AYQ N+I EFEKILK+N   IMDDPFIR +IE+LL+N+RTQVL+KLIKPYTRI
Sbjct: 312 AMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRI 371

Query: 409 RIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKYTAIDKWNT 468
            IPFISKELN+   DVE LLV  ILDN I G IDQVN+LLE   + +G  +YTA+DKW  
Sbjct: 372 HIPFISKELNIDVADVESLLVQCILDNTIHGRIDQVNQLLELDHQKRGGARYTALDKWTN 431

Query: 469 QLKSLYQTVSNRV 482
           QL SL Q V +++
Sbjct: 432 QLNSLNQAVVSKL 442

[Close]

BLAST of CmaCh02G011920.1 vs. TAIR 10
Match: AT2G26990.1 (proteasome family protein )

HSP 1 Score: 770.8 bits (1989), Expect = 6.6e-223
Identity = 383/438 (87.44%), Postives = 411/438 (93.84%), Query Frame = 0


Query: 44  MGSDADMEDYGFEYSDDEPEEQDVDIENQYYNSKGLVEMDPEGALAGFAEVVRMEPEKAE 103
           M SDADMEDYGFEYSD+E EEQDVDIENQYYNSKG+VE +PE AL+GFAEVV+MEPEKA+
Sbjct: 1   MASDADMEDYGFEYSDEEQEEQDVDIENQYYNSKGMVETEPEEALSGFAEVVQMEPEKAD 60

Query: 104 WGFKALKQTVKLYYRLGRYKEMMESYRVMLTYIKSAVTRNYSEKCINNIMDFVSGSASQS 163
           WGFKALKQTVK+YYRLG+YKEMME+Y  MLTYIKSAVTRNYSEKCINNIMDFVSGSASQ+
Sbjct: 61  WGFKALKQTVKIYYRLGKYKEMMEAYTEMLTYIKSAVTRNYSEKCINNIMDFVSGSASQN 120

Query: 164 FGLLQEFYQTTLKALEEAKNERLWFKTNLKLCKIWFDIGEYGRMIKILKELHKSCQREDG 223
            GLLQEFYQTTLKALEEAKNERLWFKTNLKLC IWFDIGEY RM KILKELHKSCQ+EDG
Sbjct: 121 TGLLQEFYQTTLKALEEAKNERLWFKTNLKLCNIWFDIGEYRRMTKILKELHKSCQKEDG 180

Query: 224 TDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKM 283
           TDDQKKGSQLLEVYAIEIQ+YTETK+NKKLKQLY KALAIKSAIPHPRIMGIIRECGGKM
Sbjct: 181 TDDQKKGSQLLEVYAIEIQIYTETKDNKKLKQLYHKALAIKSAIPHPRIMGIIRECGGKM 240

Query: 284 HMAERQWPEAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKN 343
           HMAERQW EAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKN
Sbjct: 241 HMAERQWEEAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKN 300

Query: 344 DPEILAMTNLIAAYQRNEILEFEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIK 403
           DPEILAMTNLIAAYQRNEI+EFE+ILKSNR+TIMDDPFIRNY+EDLLK VRTQVLLKLIK
Sbjct: 301 DPEILAMTNLIAAYQRNEIIEFERILKSNRRTIMDDPFIRNYMEDLLKKVRTQVLLKLIK 360

Query: 404 PYTRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKYTAI 463
           PYT+I IPFISKELNVPE DV +LLVSLILD+RIDGHID++NR L RGD   G K + A+
Sbjct: 361 PYTKIGIPFISKELNVPETDVTELLVSLILDSRIDGHIDEMNRYLLRGDSGNGRKLHKAV 420

Query: 464 DKWNTQLKSLYQTVSNRV 482
           DKWN+QLKSL   +++RV
Sbjct: 421 DKWNSQLKSLSSNITSRV 438

[Close]

BLAST of CmaCh02G011920.1 vs. TAIR 10
Match: AT1G29150.1 (non-ATPase subunit 9 )

HSP 1 Score: 97.4 bits (241), Expect = 3.2e-20
Identity = 80/326 (24.54%), Postives = 152/326 (46.63%), Query Frame = 0


Query: 127 ESYRVMLTYIK---SAVTRNYSEKCINNIMDFVS---GSASQSFGLLQEFYQTTLKALEE 186
           E  R +LT ++   S + +  + K +  I+D V+   G+      L +E  + T      
Sbjct: 61  EDLRKLLTKLRPFFSLIPKAKTAKIVRGIIDAVAKIPGTTDLQITLCKEMVEWT----RA 120

Query: 187 AKNERLWFKTNLKLCKIWFDIGEYGRMIKILKELHKSCQREDGTDDQKKGSQLLEVYAIE 246
            K   L  +   +L  +  +  EY   + +L  L K  +R    DD+     L+++  +E
Sbjct: 121 EKRTFLRQRVEARLAALLMENKEYVEALALLSTLVKEVRR---LDDK---LLLVDIDLLE 180

Query: 247 IQMYTETKNNKKLKQLYQKALAIKSAI-PHPRIMGIIRECGGKMHMAERQWPEAATDFFE 306
            +++   +N  K K     A    +AI   P   G I    G +H  E+ +    + FFE
Sbjct: 181 SKLHFSLRNLPKAKAALTAARTAANAIYVPPAQQGTIDLQSGILHAEEKDYKTGYSYFFE 240

Query: 307 AFKNYDEAGNQRRIQCLKYLVLANMLME--SEVNPFDGQEAKPYKNDPEILAMTNLIAAY 366
           AF++++  G+ R +  LKY++L  +++    +V      +A      P++ AM  +  A+
Sbjct: 241 AFESFNALGDPRAVFSLKYMLLCKIMVSQADDVAGIISSKAGLQYVGPDLDAMKAVADAH 300

Query: 367 QRNEILEFEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFISKEL 426
            +  +  FE  L+  +  + DDP +  ++  L   +  Q L +LI+P++R+ I  I++ +
Sbjct: 301 SKRSLKLFENALRDYKAQLEDDPIVHRHLSSLYDTLLEQNLCRLIEPFSRVEIAHIAELI 360

Query: 427 NVPEKDVEQLLVSLILDNRIDGHIDQ 444
            +P   VE+ L  +ILD +  G +DQ
Sbjct: 361 GLPLDHVEKKLSQMILDKKFAGTLDQ 376

[Close]

BLAST of CmaCh02G011920.1 vs. TAIR 10
Match: AT1G20200.1 (PAM domain (PCI/PINT associated module) protein )

HSP 1 Score: 44.3 bits (103), Expect = 3.3e-04
Identity = 54/215 (25.12%), Postives = 87/215 (40.47%), Query Frame = 0


Query: 256 LYQKALAIKSAIPHPRIMGIIRECG-----GKMHMAERQWPEAATDFFEAFKNYDEAGNQ 315
           LY +A  ++S  P        + C      GK+   + ++ +A     +A +    A   
Sbjct: 217 LYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALG 276

Query: 316 RRIQCLKYLVLANMLM----ESEVNPFDGQE--AKPYKNDPEILAMTNLIAAYQRNEILE 375
            RIQC K+ +L  +L+    E  +    G E   +PY        +TN   A +  ++  
Sbjct: 277 FRIQCNKWAILVRLLLGEIPERSIFTQKGMEKALRPY------FELTN---AVRIGDLEL 336

Query: 376 FEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFISKELNV----P 435
           F  + +    T   D    N I  L  NV    L  +   Y+RI +P ++K+L +    P
Sbjct: 337 FRTVQEKFLDTFAQDR-THNLIVRLRHNVIRTGLRNISISYSRISLPDVAKKLRLNSENP 396

Query: 436 EKDVEQLLVSLILDNRIDGHIDQVNRLL---ERGD 453
             D E ++   I D  ID  ID  N  +   E GD
Sbjct: 397 VADAESIVAKAIRDGAIDATIDHKNGCMVSKETGD 421

The following BLAST results are available for this feature:

BLAST of CmaCh02G011920.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W207	9.3e-222	87.44	COP9 signalosome complex subunit 2 OS=Arabidopsis thaliana OX=3702 GN=CSN2 PE=1 ...	[more]
Q6IR75	4.0e-164	65.82	COP9 signalosome complex subunit 2 (Fragment) OS=Xenopus laevis OX=8355 GN=csn2 ...	[more]
P61201	5.7e-163	65.36	COP9 signalosome complex subunit 2 OS=Homo sapiens OX=9606 GN=COPS2 PE=1 SV=1	[more]
P61202	5.7e-163	65.36	COP9 signalosome complex subunit 2 OS=Mus musculus OX=10090 GN=Cops2 PE=1 SV=1	[more]
P61203	5.7e-163	65.36	COP9 signalosome complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Cops2 PE=1 S...	[more]

BLAST of CmaCh02G011920.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G26990.1	6.6e-223	87.44	proteasome family protein	[more]
AT1G29150.1	3.2e-20	24.54	non-ATPase subunit 9	[more]
AT1G20200.1	3.3e-04	25.12	PAM domain (PCI/PINT associated module) protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00753	PINT	coord: 384..466 e-value: 1.8E-22 score: 90.7
None	No IPR available	GENE3D	1.25.40.570		coord: 107..482 e-value: 1.7E-111 score: 375.0
None	No IPR available	PANTHER	PTHR10678	26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2	coord: 44..481
None	No IPR available	PANTHER	PTHR10678:SF12	SUBFAMILY NOT NAMED	coord: 44..481
IPR000717	Proteasome component (PCI) domain	SMART	SM00088	PINT_4	coord: 384..466 e-value: 1.8E-22 score: 90.7
IPR000717	Proteasome component (PCI) domain	PFAM	PF01399	PCI	coord: 349..449 e-value: 1.3E-25 score: 90.0
IPR000717	Proteasome component (PCI) domain	PROSITE	PS50250	PCI	coord: 286..455 score: 25.594427
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 378..454

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh02G011920	CmaCh02G011920	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh02G011920.1:exon:2701	CmaCh02G011920.1:exon:2701	exon
CmaCh02G011920.1:exon:2700	CmaCh02G011920.1:exon:2700	exon
CmaCh02G011920.1:exon:2699	CmaCh02G011920.1:exon:2699	exon
CmaCh02G011920.1:exon:2698	CmaCh02G011920.1:exon:2698	exon
CmaCh02G011920.1:exon:2697	CmaCh02G011920.1:exon:2697	exon
CmaCh02G011920.1:exon:2696	CmaCh02G011920.1:exon:2696	exon
CmaCh02G011920.1:exon:2695	CmaCh02G011920.1:exon:2695	exon
CmaCh02G011920.1:exon:2694	CmaCh02G011920.1:exon:2694	exon
CmaCh02G011920.1:exon:2693	CmaCh02G011920.1:exon:2693	exon
CmaCh02G011920.1:exon:2692	CmaCh02G011920.1:exon:2692	exon
CmaCh02G011920.1:exon:2691	CmaCh02G011920.1:exon:2691	exon
CmaCh02G011920.1:exon:2690	CmaCh02G011920.1:exon:2690	exon
CmaCh02G011920.1:exon:2689	CmaCh02G011920.1:exon:2689	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh02G011920.1:three_prime_utr	CmaCh02G011920.1:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh02G011920.1:cds	CmaCh02G011920.1:cds_13	CDS
CmaCh02G011920.1:cds	CmaCh02G011920.1:cds_12	CDS
CmaCh02G011920.1:cds	CmaCh02G011920.1:cds_11	CDS
CmaCh02G011920.1:cds	CmaCh02G011920.1:cds_10	CDS
CmaCh02G011920.1:cds	CmaCh02G011920.1:cds_9	CDS
CmaCh02G011920.1:cds	CmaCh02G011920.1:cds_8	CDS
CmaCh02G011920.1:cds	CmaCh02G011920.1:cds_7	CDS
CmaCh02G011920.1:cds	CmaCh02G011920.1:cds_6	CDS
CmaCh02G011920.1:cds	CmaCh02G011920.1:cds_5	CDS
CmaCh02G011920.1:cds	CmaCh02G011920.1:cds_4	CDS
CmaCh02G011920.1:cds	CmaCh02G011920.1:cds_3	CDS
CmaCh02G011920.1:cds	CmaCh02G011920.1:cds_2	CDS
CmaCh02G011920.1:cds	CmaCh02G011920.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh02G011920.1	CmaCh02G011920.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000338	protein deneddylation
cellular_component	GO:0008180	COP9 signalosome
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0000502	proteasome complex