CmaCh01G012220.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh01G012220.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	ethylene-responsive transcription factor 4
Location	Cma_Chr01: 8835781 .. 8838691 (-)
Sequence length	753
RNA-Seq Expression	CmaCh01G012220.1
Synteny	CmaCh01G012220.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTTTCCATCCAATTTCAAAAGAAGTATACGATCCCACGCGGCGCCGCAATCACAACCAAAATTGTCAGTTTTTTCCATTTTCCTTTTCTTTAAGTTGCCGTCAGCAACCGGTTACCGGTGGCACCCACGAACCAAACCTCCCACGTGACCACACCCACCGCCCCTCTATTTATCTCTGCCCCGCGTGACCACACCTTCCCCACATTTTAATTATTTATATATTCAATTACTAATTCTACCCTCACCACAATATTACATTATCTTAATATACCCCTTATAATAAAATATCAAATATGATATATATATATATGGATGGATAGTACTAAATATCTTTTTAACACTTTCATTTTTTATTTTCTTTTTTGTTATTAAAATAAAATAAAAAAATTTGACGTCATGATTACATGATATTACATGTGTTAAGGATAGTTGACCGTTCATTATAAGGAAAATATCTAGATATTTGCCTTACATTACGGATTACCATATTTTCCCCTTTACTAAATGCAAATATATTGTATTCATTTATTATTCTTTCCTTTTATCGCTATTTCCTTATTATTTGTAATTTACCTTATTTCTGTATTCTGTAAATGATTATAAATAAGAGAACTCTCACCACCATTTGGGTGTGGTGGATTAATCAAACATTCACATGGTATCAGAGCCCTTTTGGTTTAACAACCCTGATTCTTTCTTCTCTATGGCTTCCGAATCTTGTTATCATCTTCTTCCTTTCAATACTCTAATCCATATGATCACCATCAAACTTTCTTTCTCCAATTATCTTCTTTGGAAAAGCCAACTTCTCCCTCTTCTTGAGAGTCAAGACATGCTGGGCTATGTCGATGGAACTATGGTTCCACCACCTCGCTTTGAACCAGAAACCTCCTCAACATTCAACCCCAAATATTTGGCATGGAGAGCAGCCGATCAACGACTTCTCTGTCTCCTGCTCTCCTCTCTCACTGAGGAAGCCATGGCTGTTGTCGTTGGTCTCTCTACTGCACGTGATGTTTGGCTTGCGTTGGAAACTACGTTCAGCCATCAGTCAAAAGCTCGTGAACTGAGACTCAAGGATGACTTGCAGTTAATGAAACGTGGCACAAAACCTGTTGCTGAGTATGCCTGTGCCTTCAAAAAAATTTGTGACCAACTTCATGCCATTGGCAGACCCGTCGAGGACATTGATAAAATGCATTGGTTCCTTCGTGGACTCGGCACCGAATTTTCAGCTTTTTCTACTGCTCAGATGGCTCTCACCCCTATCCCCTGTTTTGCAGATCTAGTCTCTAAAACTGAAAGTTTTGAGTTGTTCCAGCGCTCCCTTGAGTCCTCTGACTCCACTCCTACAACATTCATAGCCACTAATCGTGGCCGCACCCATGAAAGTCACCCTGCTTTCTTTACCAACCAGCGAGGTCGTTCTTATTCTCACAAAAACAACTCTTCTAATCGAGGACGAACCCACTCAAGTCAGGGTCGTCGACCACCTCATTGCCAAATATGCCGCAAAGAGGGCCATTATGCTGACCGCTGCAACCAACGGTATGCTGACCTGATTCTTCTCACCACCATTTGGGTGTGGTGGATTAATCAAACATTCACAACATGTATATAAATAATATTATATATATATATATATATATTTAAACCTACATCAGTTGGGTTGAGTTAGAAAAATCTTTCGATTTTGAATTGGTTGGGTTGGTGACTCGAACCGTTCCAAATAAAGTTGAGTTAGAATAGGCTGTCACTGGCTTTTTTTTTAGTAATATTATAAAGCTCAAATATCAAATATTCACGAGTTATCGTATATCACTAATATCGATTACAAATGTCAAATATTATCAAAAAAATGCCAATACACATGGACCCATCCAAAATTTTCATTTTCCAAAAATTCAAAGGAAAAAATGTAAGCTAATTTAATTTTTTAATTTATTATTTATTATTTATAATTTTTAAGCCTGTTAAATTTTAAAAATTTTAATTGGAACTTAATCGCCACCACCCGAGTGGAGGAGACGGCGGAGCGGGGAGGCAAGGAAAGGGAGCGGTCAAACGCCTCGTTGACTGAGCTTTGAATATATTCATCACCTATGCTTCCTTTCATTTTCTTTTTCCAAAGGCTGCATGGGGCACGTGCTTTGTGCGTGATTCAAACGCTCCTTCTTCTACGCTCCAAAATTACTCCTCTTTTTTTTTTCCCTCTCTCTCTTCCGCCTATATAAACCCTAAATCCTTCCCCAATTTTCCCATCCGAATTTCATTTCGTATTAATTCCTCTCTGTAACCACAGTTCTTTACATTTTAAAACAGAACCGATTAATGGCTGCCGGAGACCGATCTACTTCAACCGCCGTCGTTGAGATCCGGTACAGAGGTGTTAGAAAGAGGCCATGGGGCCGTTACGCAGCGGAAATCCGCGACCCTCGCAAAAAAACTAGGGTCTGGCTTGGCACCTTCAACACGGCGGAGGAAGCTGCTCGTGCTTACGACACAGCGGCGCGTGAATTCCGAGGCGCTAATGCCAAAACCAACTTCCCAACTCCGAACGAATATCTCGTCGACGACAACAACAACAAGTTCCGTAGATCCACTTGCAGTAGTCCCAGCGAGAGCAGCACCGTGGACTCCTCTTCTGCTCCATCCCCGACGGATGCTTCCCTCACTCGCTTCCTCGATGGCAGCCACCCTCCGGCCATTTCCCGTCCAATCTTTTTCTTTGACGCGTTCGCTCAGGCGGAGAAGATGAGCGACTTTCACCGGACTGTAACCGTCGCTGTTGCCGGCGGATCGGCGAGCGACTCCGATTCCTCATCCGTAGTTGATTTCGACGATGATTCGCAAAAATCACGGCCGTTTGATTTTGACCTGAATCTTCCGGCGGTGGAAGTTGCCTGA

mRNA sequence

ATGACTTTCCATCCAATTTCAAAAGAAGTATACGATCCCACGCGGCGCCGCAATCACAACCAAAATTGTCAGTTTTTTCCATTTTCCTTTTCTTTAAGTTGCCGTCAGCAACCGGTTACCGGTGGCACCCACGAACCAAACCTCCCACTTCTTTACATTTTAAAACAGAACCGATTAATGGCTGCCGGAGACCGATCTACTTCAACCGCCGTCGTTGAGATCCGGTACAGAGGTGTTAGAAAGAGGCCATGGGGCCGTTACGCAGCGGAAATCCGCGACCCTCGCAAAAAAACTAGGGTCTGGCTTGGCACCTTCAACACGGCGGAGGAAGCTGCTCGTGCTTACGACACAGCGGCGCGTGAATTCCGAGGCGCTAATGCCAAAACCAACTTCCCAACTCCGAACGAATATCTCGTCGACGACAACAACAACAAGTTCCGTAGATCCACTTGCAGTAGTCCCAGCGAGAGCAGCACCGTGGACTCCTCTTCTGCTCCATCCCCGACGGATGCTTCCCTCACTCGCTTCCTCGATGGCAGCCACCCTCCGGCCATTTCCCGTCCAATCTTTTTCTTTGACGCGTTCGCTCAGGCGGAGAAGATGAGCGACTTTCACCGGACTGTAACCGTCGCTGTTGCCGGCGGATCGGCGAGCGACTCCGATTCCTCATCCGTAGTTGATTTCGACGATGATTCGCAAAAATCACGGCCGTTTGATTTTGACCTGAATCTTCCGGCGGTGGAAGTTGCCTGA

Coding sequence (CDS)

ATGACTTTCCATCCAATTTCAAAAGAAGTATACGATCCCACGCGGCGCCGCAATCACAACCAAAATTGTCAGTTTTTTCCATTTTCCTTTTCTTTAAGTTGCCGTCAGCAACCGGTTACCGGTGGCACCCACGAACCAAACCTCCCACTTCTTTACATTTTAAAACAGAACCGATTAATGGCTGCCGGAGACCGATCTACTTCAACCGCCGTCGTTGAGATCCGGTACAGAGGTGTTAGAAAGAGGCCATGGGGCCGTTACGCAGCGGAAATCCGCGACCCTCGCAAAAAAACTAGGGTCTGGCTTGGCACCTTCAACACGGCGGAGGAAGCTGCTCGTGCTTACGACACAGCGGCGCGTGAATTCCGAGGCGCTAATGCCAAAACCAACTTCCCAACTCCGAACGAATATCTCGTCGACGACAACAACAACAAGTTCCGTAGATCCACTTGCAGTAGTCCCAGCGAGAGCAGCACCGTGGACTCCTCTTCTGCTCCATCCCCGACGGATGCTTCCCTCACTCGCTTCCTCGATGGCAGCCACCCTCCGGCCATTTCCCGTCCAATCTTTTTCTTTGACGCGTTCGCTCAGGCGGAGAAGATGAGCGACTTTCACCGGACTGTAACCGTCGCTGTTGCCGGCGGATCGGCGAGCGACTCCGATTCCTCATCCGTAGTTGATTTCGACGATGATTCGCAAAAATCACGGCCGTTTGATTTTGACCTGAATCTTCCGGCGGTGGAAGTTGCCTGA

Protein sequence

MTFHPISKEVYDPTRRRNHNQNCQFFPFSFSLSCRQQPVTGGTHEPNLPLLYILKQNRLMAAGDRSTSTAVVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAAREFRGANAKTNFPTPNEYLVDDNNNKFRRSTCSSPSESSTVDSSSAPSPTDASLTRFLDGSHPPAISRPIFFFDAFAQAEKMSDFHRTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPFDFDLNLPAVEVA

Homology

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BLAST of CmaCh01G012220.1 vs. ExPASy Swiss-Prot
Match: O80340 (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=ERF4 PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.8e-35
Identity = 104/213 (48.83%), Postives = 125/213 (58.69%), Query Frame = 0


Query: 62  AGDRSTSTAVVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAARE 121
           A    T     EIRYRGVRKRPWGRYAAEIRDP KKTRVWLGTF+TAEEAARAYDTAAR+
Sbjct: 11  ATTNQTHNNAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARD 70

Query: 122 FRGANAKTNFPTPNEYLVDDNNNKFRRSTCSSPSESSTVDSSSAPSPTDASLTRFLDGSH 181
           FRGA AKTNFPT     ++ ++ K       SPS+SST+D +S P+    S T    G+ 
Sbjct: 71  FRGAKAKTNFPT----FLELSDQKVPTGFARSPSQSSTLDCASPPTLVVPSATA---GNV 130

Query: 182 PPAI-----------------SRPIFFFDAF-------AQAEKMSDFHRTVTVAVAG--- 241
           PP +                 SRP++F D          Q   ++   R+  V VA    
Sbjct: 131 PPQLELSLGGGGGGSCYQIPMSRPVYFLDLMGIGNVGRGQPPPVTSAFRSPVVHVATKMA 190

Query: 242 -GSASDSDSSSVVDFDDDSQK-SRPFDFDLNLP 246
            G+ SDSDSSSVVDF+   +K S+  D DLNLP
Sbjct: 191 CGAQSDSDSSSVVDFEGGMEKRSQLLDLDLNLP 216

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BLAST of CmaCh01G012220.1 vs. ExPASy Swiss-Prot
Match: Q40477 (Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum OX=4097 GN=ERF4 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 5.3e-27
Identity = 96/221 (43.44%), Postives = 117/221 (52.94%), Query Frame = 0


Query: 63  GDRSTSTAVVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAAREF 122
           G    +  V E+ YRGVRKRPWGRYAAEIRDP KK+RVWLGTF+TAEEAA+AYDTAAREF
Sbjct: 14  GGNVKTDGVKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREF 73

Query: 123 RGANAKTNFPTPNEYLVDDNNNKFRRSTCSSPSESSTVDSSS------AP--SPTDASLT 182
           RG  AKTNFP+P E                SPS SSTV+SSS      AP  +P +  LT
Sbjct: 74  RGPKAKTNFPSPTEN--------------QSPSHSSTVESSSGENGVHAPPHAPLELDLT 133

Query: 183 RFL-----DGS---------------HPPAIS-----RPIFFFDAFAQA---EKMSDFHR 242
           R L     DG                  P ++     +P+  FD+  +A    +   +H 
Sbjct: 134 RRLGSVAADGGDNCRRSGEVGYPIFHQQPTVAVLPNGQPVLLFDSLWRAGVVNRPQPYHV 193

Query: 243 T---VTVAVAGGSASDSDSSSVVDFDDDSQKSRPFDFDLNL 245
           T        AG   + SDSSS V+ ++     R  D DLNL
Sbjct: 194 TPMGFNGVNAGVGPTVSDSSSAVE-ENQYDGKRGIDLDLNL 219

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BLAST of CmaCh01G012220.1 vs. ExPASy Swiss-Prot
Match: Q9MAI5 (Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana OX=3702 GN=ERF8 PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 9.9e-26
Identity = 86/184 (46.74%), Postives = 108/184 (58.70%), Query Frame = 0


Query: 68  STAVVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAAREFRGANA 127
           S A  EIRYRGVRKRPWGRYAAEIRDP KKTRVWLGTF+TA++AARAYD AAR+FRG  A
Sbjct: 23  SNAAKEIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAARAYDAAARDFRGVKA 82

Query: 128 KTNFPTPNEYLVDDNNNKFRRSTCSSPSESST-VDSSSA-----PSPTDASLTRFLDGSH 187
           KTNF                    SSP++SST VDS +A     P   + SL        
Sbjct: 83  KTNFGV---------------IVGSSPTQSSTVVDSPTAARFITPPHLELSLGGGGACRR 142

Query: 188 PPAISRPIFFFDAFAQAEKMSDFHRTVTVAVAGGSASDSDSSSVVDFDDDSQK-SRPFDF 245
              +  P+++++       M+ + +  T     G  S+S++SSVVDF+  + K S P D 
Sbjct: 143 KIPLVHPVYYYN-------MATYPKMTTC----GVQSESETSSVVDFEGGAGKISPPLDL 180

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BLAST of CmaCh01G012220.1 vs. ExPASy Swiss-Prot
Match: Q9LW49 (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ERF4 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.9e-25
Identity = 94/224 (41.96%), Postives = 118/224 (52.68%), Query Frame = 0


Query: 63  GDRSTSTAVVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAAREF 122
           G    +  V E+ YRGVRKRPWGRYAAEIRDP KK+RVWLGTF+TAEEAA+AYDTAAREF
Sbjct: 14  GGNVKTNGVKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREF 73

Query: 123 RGANAKTNFPTPNEYLVDDNNNKFRRSTCSSPSESSTVDSSS------AP--SPTDASLT 182
           RG  AKTNFP P+E                S S SST++SSS      AP  +P +  LT
Sbjct: 74  RGPKAKTNFPLPSEN--------------QSTSHSSTMESSSGETGIHAPPHAPLELDLT 133

Query: 183 RFL-----DGS---------------HPPAIS-----RPIFFFDAF---AQAEKMSDFHR 242
           R L     DG                  P ++     +P+  FD+        +   +H 
Sbjct: 134 RRLGSVAADGGDNCRRSGEVGYPIFHQQPTVAVLPNGQPVLLFDSLWRPGVVNRPQPYH- 193

Query: 243 TVTVAV------AGGSASDSDSSSVVDFDDDSQKSRPFDFDLNL 245
            + +A+      AG   + SDSSSVV+ ++     R  D DLNL
Sbjct: 194 VMPMAMGFNGVNAGVDPTVSDSSSVVE-ENQYDGKRGIDLDLNL 221

[Close]

BLAST of CmaCh01G012220.1 vs. ExPASy Swiss-Prot
Match: Q9FE67 (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ERF9 PE=1 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 6.4e-25
Identity = 59/88 (67.05%), Postives = 69/88 (78.41%), Query Frame = 0


Query: 73  EIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAAREFRGANAKTNFP 132
           E+ +RGVRKRPWGRYAAEIRDP KKTRVWLGTF+TAEEAARAYDTAAREFRG+ AKTNFP
Sbjct: 30  EVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNFP 89

Query: 133 TPNEYLV----DDNNNKFRRSTCSSPSE 157
            P E        +N++   R+T ++  E
Sbjct: 90  LPGESTTVNDGGENDSYVNRTTVTTARE 117

[Close]

BLAST of CmaCh01G012220.1 vs. ExPASy TrEMBL
Match: A0A6J1IXY7 (ethylene-responsive transcription factor 4 OS=Cucurbita maxima OX=3661 GN=LOC111480939 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 4.1e-99
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 60  MAAGDRSTSTAVVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAA 119
           MAAGDRSTSTAVVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAA
Sbjct: 1   MAAGDRSTSTAVVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAA 60

Query: 120 REFRGANAKTNFPTPNEYLVDDNNNKFRRSTCSSPSESSTVDSSSAPSPTDASLTRFLDG 179
           REFRGANAKTNFPTPNEYLVDDNNNKFRRSTCSSPSESSTVDSSSAPSPTDASLTRFLDG
Sbjct: 61  REFRGANAKTNFPTPNEYLVDDNNNKFRRSTCSSPSESSTVDSSSAPSPTDASLTRFLDG 120

Query: 180 SHPPAISRPIFFFDAFAQAEKMSDFHRTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPFD 239
           SHPPAISRPIFFFDAFAQAEKMSDFHRTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPFD
Sbjct: 121 SHPPAISRPIFFFDAFAQAEKMSDFHRTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPFD 180

Query: 240 FDLNLPAVEVA 251
           FDLNLPAVEVA
Sbjct: 181 FDLNLPAVEVA 191

[Close]

BLAST of CmaCh01G012220.1 vs. ExPASy TrEMBL
Match: A0A6J1FTH9 (ethylene-responsive transcription factor 4 OS=Cucurbita moschata OX=3662 GN=LOC111446690 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 6.1e-95
Identity = 186/192 (96.88%), Postives = 188/192 (97.92%), Query Frame = 0


Query: 60  MAAGDRSTSTAVVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAA 119
           MAAGDRSTSTA VEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYD+AA
Sbjct: 1   MAAGDRSTSTAAVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDSAA 60

Query: 120 REFRGANAKTNFPTPNEYLVDD-NNNKFRRSTCSSPSESSTVDSSSAPSPTDASLTRFLD 179
           REFRGANAKTNFPTPNEYLVDD NNNKFRRS CSSPSESSTVDSSSAPSPTDASLTRFLD
Sbjct: 61  REFRGANAKTNFPTPNEYLVDDNNNNKFRRSACSSPSESSTVDSSSAPSPTDASLTRFLD 120

Query: 180 GSHPPAISRPIFFFDAFAQAEKMSDFHRTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPF 239
           GSHPPAISRPIFFFDAFAQAEKM+DF RTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPF
Sbjct: 121 GSHPPAISRPIFFFDAFAQAEKMNDFRRTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPF 180

Query: 240 DFDLNLPAVEVA 251
           DFDLNLPAVEVA
Sbjct: 181 DFDLNLPAVEVA 192

[Close]

BLAST of CmaCh01G012220.1 vs. ExPASy TrEMBL
Match: A0A6J1CD65 (ethylene-responsive transcription factor 4 OS=Momordica charantia OX=3673 GN=LOC111010466 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 1.5e-69
Identity = 151/197 (76.65%), Postives = 163/197 (82.74%), Query Frame = 0


Query: 60  MAAGDRSTSTAVV---EIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYD 119
           MAAGDR TS++     EIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYD
Sbjct: 1   MAAGDRPTSSSAAVTPEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYD 60

Query: 120 TAAREFRGANAKTNFPTPNEYLVDDNNNKFRRSTCSSPSESSTVDSSS---APSPTDASL 179
           TAAREFRG NAKTNFP P E+ V    N +R+S CSSPS+SSTVDSSS   AP P D +L
Sbjct: 61  TAAREFRGGNAKTNFPVPAEFAVLVGENHYRKSACSSPSQSSTVDSSSPSPAPPPVDPAL 120

Query: 180 TRFLDGSHPPAISRPIFFFDAFAQAEKMSDFHRTVTVAVAGGSASDSDSSSVVDFDDDSQ 239
           T F+DG    AISRPI+FFDAFAQAEK SDFHRTVTVAVAGGSASDSDSSSVV   + ++
Sbjct: 121 THFIDGG---AISRPIYFFDAFAQAEKTSDFHRTVTVAVAGGSASDSDSSSVVVDFNHTR 180

Query: 240 KSRPFDFDLNLPAVEVA 251
           K RP DFDLNLPAVEVA
Sbjct: 181 KPRPLDFDLNLPAVEVA 194

[Close]

BLAST of CmaCh01G012220.1 vs. ExPASy TrEMBL
Match: A0A5A7VEL4 (Ethylene-responsive transcription factor 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001630 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.3e-65
Identity = 152/196 (77.55%), Postives = 164/196 (83.67%), Query Frame = 0


Query: 60  MAAGDRSTSTA---VVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYD 119
           MAAGDRSTS A     EIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYD
Sbjct: 1   MAAGDRSTSAAPPNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYD 60

Query: 120 TAAREFRGANAKTNFPTPNEYLVDDNNN-KFRRSTC-SSPSESSTVDSSSAPSPTDASLT 179
           TAAREFRGANAKTNFP  N++L+ DNN+  F +S C SSPS SSTV+SSS PSPT ++  
Sbjct: 61  TAAREFRGANAKTNFPVQNDFLIVDNNHTNFHKSACSSSPSHSSTVESSS-PSPTPSN-- 120

Query: 180 RFLDGS-HPPAISRPIFFFDAFAQAEKMSDFHRTVTVAVAGGSASDSDSSSVVDFDDDSQ 239
            +LDG  H P ISRPIFFFDAFAQAEK+SDF RTVT A AG  ASDSDSSSVVDF D ++
Sbjct: 121 PYLDGGIHAPGISRPIFFFDAFAQAEKISDFRRTVTAAAAG--ASDSDSSSVVDF-DTTR 180

Query: 240 KSRPFDFDLNLPAVEV 250
           KSRP DFDLNLPAVEV
Sbjct: 181 KSRPLDFDLNLPAVEV 190

[Close]

BLAST of CmaCh01G012220.1 vs. ExPASy TrEMBL
Match: A0A1S3CLM9 (ethylene-responsive transcription factor 4 OS=Cucumis melo OX=3656 GN=LOC103501853 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.3e-65
Identity = 152/196 (77.55%), Postives = 164/196 (83.67%), Query Frame = 0


Query: 60  MAAGDRSTSTA---VVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYD 119
           MAAGDRSTS A     EIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYD
Sbjct: 1   MAAGDRSTSAAPPNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYD 60

Query: 120 TAAREFRGANAKTNFPTPNEYLVDDNNN-KFRRSTC-SSPSESSTVDSSSAPSPTDASLT 179
           TAAREFRGANAKTNFP  N++L+ DNN+  F +S C SSPS SSTV+SSS PSPT ++  
Sbjct: 61  TAAREFRGANAKTNFPVQNDFLIVDNNHTNFHKSACSSSPSHSSTVESSS-PSPTPSN-- 120

Query: 180 RFLDGS-HPPAISRPIFFFDAFAQAEKMSDFHRTVTVAVAGGSASDSDSSSVVDFDDDSQ 239
            +LDG  H P ISRPIFFFDAFAQAEK+SDF RTVT A AG  ASDSDSSSVVDF D ++
Sbjct: 121 PYLDGGIHAPGISRPIFFFDAFAQAEKISDFRRTVTAAAAG--ASDSDSSSVVDF-DTTR 180

Query: 240 KSRPFDFDLNLPAVEV 250
           KSRP DFDLNLPAVEV
Sbjct: 181 KSRPLDFDLNLPAVEV 190

[Close]

BLAST of CmaCh01G012220.1 vs. NCBI nr
Match: XP_022981946.1 (ethylene-responsive transcription factor 4 [Cucurbita maxima])

HSP 1 Score: 370.9 bits (951), Expect = 8.5e-99
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 60  MAAGDRSTSTAVVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAA 119
           MAAGDRSTSTAVVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAA
Sbjct: 1   MAAGDRSTSTAVVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAA 60

Query: 120 REFRGANAKTNFPTPNEYLVDDNNNKFRRSTCSSPSESSTVDSSSAPSPTDASLTRFLDG 179
           REFRGANAKTNFPTPNEYLVDDNNNKFRRSTCSSPSESSTVDSSSAPSPTDASLTRFLDG
Sbjct: 61  REFRGANAKTNFPTPNEYLVDDNNNKFRRSTCSSPSESSTVDSSSAPSPTDASLTRFLDG 120

Query: 180 SHPPAISRPIFFFDAFAQAEKMSDFHRTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPFD 239
           SHPPAISRPIFFFDAFAQAEKMSDFHRTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPFD
Sbjct: 121 SHPPAISRPIFFFDAFAQAEKMSDFHRTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPFD 180

Query: 240 FDLNLPAVEVA 251
           FDLNLPAVEVA
Sbjct: 181 FDLNLPAVEVA 191

[Close]

BLAST of CmaCh01G012220.1 vs. NCBI nr
Match: KAG6607891.1 (Ethylene-responsive transcription factor 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 361.7 bits (927), Expect = 5.1e-96
Identity = 186/191 (97.38%), Postives = 188/191 (98.43%), Query Frame = 0


Query: 60  MAAGDRSTSTAVVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAA 119
           MAAGDRSTSTA VEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYD+AA
Sbjct: 1   MAAGDRSTSTAAVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDSAA 60

Query: 120 REFRGANAKTNFPTPNEYLVDDNNNKFRRSTCSSPSESSTVDSSSAPSPTDASLTRFLDG 179
           REFRGANAKTNFPTPNEYLVDDNNNKFRRS CSSPSESSTVDSSSAPSPTDASLTRFLDG
Sbjct: 61  REFRGANAKTNFPTPNEYLVDDNNNKFRRSACSSPSESSTVDSSSAPSPTDASLTRFLDG 120

Query: 180 SHPPAISRPIFFFDAFAQAEKMSDFHRTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPFD 239
           SHPPAISRPIFFFDAFAQAEKM+DF RTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPFD
Sbjct: 121 SHPPAISRPIFFFDAFAQAEKMNDFRRTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPFD 180

Query: 240 FDLNLPAVEVA 251
           FDLNLPAVEVA
Sbjct: 181 FDLNLPAVEVA 191

[Close]

BLAST of CmaCh01G012220.1 vs. NCBI nr
Match: XP_022941385.1 (ethylene-responsive transcription factor 4 [Cucurbita moschata] >KAG7037418.1 Ethylene-responsive transcription factor 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 357.1 bits (915), Expect = 1.3e-94
Identity = 186/192 (96.88%), Postives = 188/192 (97.92%), Query Frame = 0


Query: 60  MAAGDRSTSTAVVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAA 119
           MAAGDRSTSTA VEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYD+AA
Sbjct: 1   MAAGDRSTSTAAVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDSAA 60

Query: 120 REFRGANAKTNFPTPNEYLVDD-NNNKFRRSTCSSPSESSTVDSSSAPSPTDASLTRFLD 179
           REFRGANAKTNFPTPNEYLVDD NNNKFRRS CSSPSESSTVDSSSAPSPTDASLTRFLD
Sbjct: 61  REFRGANAKTNFPTPNEYLVDDNNNNKFRRSACSSPSESSTVDSSSAPSPTDASLTRFLD 120

Query: 180 GSHPPAISRPIFFFDAFAQAEKMSDFHRTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPF 239
           GSHPPAISRPIFFFDAFAQAEKM+DF RTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPF
Sbjct: 121 GSHPPAISRPIFFFDAFAQAEKMNDFRRTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPF 180

Query: 240 DFDLNLPAVEVA 251
           DFDLNLPAVEVA
Sbjct: 181 DFDLNLPAVEVA 192

[Close]

BLAST of CmaCh01G012220.1 vs. NCBI nr
Match: XP_023525528.1 (ethylene-responsive transcription factor 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 353.6 bits (906), Expect = 1.4e-93
Identity = 185/192 (96.35%), Postives = 186/192 (96.88%), Query Frame = 0


Query: 60  MAAGDRSTSTAVVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAA 119
           MAAG RSTSTA VEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYD AA
Sbjct: 1   MAAGLRSTSTAAVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDAAA 60

Query: 120 REFRGANAKTNFPTPNEYLVDD-NNNKFRRSTCSSPSESSTVDSSSAPSPTDASLTRFLD 179
           REFRGANAKTNFPTPNEYL+DD NNNKFRRS CSSPSESSTVDSSSAPSPTDASLTRFLD
Sbjct: 61  REFRGANAKTNFPTPNEYLIDDNNNNKFRRSACSSPSESSTVDSSSAPSPTDASLTRFLD 120

Query: 180 GSHPPAISRPIFFFDAFAQAEKMSDFHRTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPF 239
           GSHPPAISRPIFFFDAFAQAEKMSDF RTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPF
Sbjct: 121 GSHPPAISRPIFFFDAFAQAEKMSDFRRTVTVAVAGGSASDSDSSSVVDFDDDSQKSRPF 180

Query: 240 DFDLNLPAVEVA 251
           DFDLNLPAVEVA
Sbjct: 181 DFDLNLPAVEVA 192

[Close]

BLAST of CmaCh01G012220.1 vs. NCBI nr
Match: XP_038897001.1 (ethylene-responsive transcription factor 4 [Benincasa hispida])

HSP 1 Score: 274.2 bits (700), Expect = 1.1e-69
Identity = 156/202 (77.23%), Postives = 169/202 (83.66%), Query Frame = 0


Query: 60  MAAGDRSTSTAVV-------EIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA 119
           M AGDRSTSTA         EIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA
Sbjct: 1   MVAGDRSTSTASTAAPPNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA 60

Query: 120 RAYDTAAREFRGANAKTNFPTPNEYLVDDNNNKFRRSTCS-SPSESSTVDSSS-APSPTD 179
           RAYDTAAREFRGANAKTNFP  NE+L+ DNNN F +S CS SPS+SSTVDSSS +P+P+D
Sbjct: 61  RAYDTAAREFRGANAKTNFPIQNEFLMVDNNNNFHKSACSTSPSQSSTVDSSSPSPAPSD 120

Query: 180 ASLTRFLDGS-HPPAISRPIFFFDAFAQAEKMSDFHRTVT--VAVAGGSASDSDSSSVVD 239
            SLT FL+ S H P ISRPIFFFDAFAQAE++S+F R VT  VA AGGS SDSDSSSVVD
Sbjct: 121 PSLTHFLNSSNHAPTISRPIFFFDAFAQAERISEFRRNVTNAVAGAGGSVSDSDSSSVVD 180

Query: 240 FDDDSQKSRPFDFDLNLPAVEV 250
           F D ++KSRP DFDLNLPAVEV
Sbjct: 181 F-DTTRKSRPLDFDLNLPAVEV 201

[Close]

BLAST of CmaCh01G012220.1 vs. TAIR 10
Match: AT3G15210.1 (ethylene responsive element binding factor 4 )

HSP 1 Score: 151.0 bits (380), Expect = 1.3e-36
Identity = 104/213 (48.83%), Postives = 125/213 (58.69%), Query Frame = 0


Query: 62  AGDRSTSTAVVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAARE 121
           A    T     EIRYRGVRKRPWGRYAAEIRDP KKTRVWLGTF+TAEEAARAYDTAAR+
Sbjct: 11  ATTNQTHNNAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARD 70

Query: 122 FRGANAKTNFPTPNEYLVDDNNNKFRRSTCSSPSESSTVDSSSAPSPTDASLTRFLDGSH 181
           FRGA AKTNFPT     ++ ++ K       SPS+SST+D +S P+    S T    G+ 
Sbjct: 71  FRGAKAKTNFPT----FLELSDQKVPTGFARSPSQSSTLDCASPPTLVVPSATA---GNV 130

Query: 182 PPAI-----------------SRPIFFFDAF-------AQAEKMSDFHRTVTVAVAG--- 241
           PP +                 SRP++F D          Q   ++   R+  V VA    
Sbjct: 131 PPQLELSLGGGGGGSCYQIPMSRPVYFLDLMGIGNVGRGQPPPVTSAFRSPVVHVATKMA 190

Query: 242 -GSASDSDSSSVVDFDDDSQK-SRPFDFDLNLP 246
            G+ SDSDSSSVVDF+   +K S+  D DLNLP
Sbjct: 191 CGAQSDSDSSSVVDFEGGMEKRSQLLDLDLNLP 216

[Close]

BLAST of CmaCh01G012220.1 vs. TAIR 10
Match: AT1G53170.1 (ethylene response factor 8 )

HSP 1 Score: 118.6 bits (296), Expect = 7.1e-27
Identity = 86/184 (46.74%), Postives = 108/184 (58.70%), Query Frame = 0


Query: 68  STAVVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAAREFRGANA 127
           S A  EIRYRGVRKRPWGRYAAEIRDP KKTRVWLGTF+TA++AARAYD AAR+FRG  A
Sbjct: 23  SNAAKEIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAARAYDAAARDFRGVKA 82

Query: 128 KTNFPTPNEYLVDDNNNKFRRSTCSSPSESST-VDSSSA-----PSPTDASLTRFLDGSH 187
           KTNF                    SSP++SST VDS +A     P   + SL        
Sbjct: 83  KTNFGV---------------IVGSSPTQSSTVVDSPTAARFITPPHLELSLGGGGACRR 142

Query: 188 PPAISRPIFFFDAFAQAEKMSDFHRTVTVAVAGGSASDSDSSSVVDFDDDSQK-SRPFDF 245
              +  P+++++       M+ + +  T     G  S+S++SSVVDF+  + K S P D 
Sbjct: 143 KIPLVHPVYYYN-------MATYPKMTTC----GVQSESETSSVVDFEGGAGKISPPLDL 180

[Close]

BLAST of CmaCh01G012220.1 vs. TAIR 10
Match: AT5G44210.1 (erf domain protein 9 )

HSP 1 Score: 115.9 bits (289), Expect = 4.6e-26
Identity = 59/88 (67.05%), Postives = 69/88 (78.41%), Query Frame = 0


Query: 73  EIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAAREFRGANAKTNFP 132
           E+ +RGVRKRPWGRYAAEIRDP KKTRVWLGTF+TAEEAARAYDTAAREFRG+ AKTNFP
Sbjct: 30  EVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNFP 89

Query: 133 TPNEYLV----DDNNNKFRRSTCSSPSE 157
            P E        +N++   R+T ++  E
Sbjct: 90  LPGESTTVNDGGENDSYVNRTTVTTARE 117

[Close]

BLAST of CmaCh01G012220.1 vs. TAIR 10
Match: AT1G50640.1 (ethylene responsive element binding factor 3 )

HSP 1 Score: 110.9 bits (276), Expect = 1.5e-24
Identity = 88/213 (41.31%), Postives = 109/213 (51.17%), Query Frame = 0


Query: 70  AVVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAAREFRGANAKT 129
           +V EIR+RGVRKRPWGR+AAEIRDP KK RVWLGTF++AEEAARAYD+AAR  RG  AKT
Sbjct: 22  SVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKAKT 81

Query: 130 NFP-----------------TPNEYLVD---------DNNNKF---RRSTCSSPSESSTV 189
           NFP                   N+  VD         D+  +F    R T  S S SSTV
Sbjct: 82  NFPIDSSSPPPPNLRFNQIRNQNQNQVDPFMDHRLFTDHQQQFPIVNRPT--SSSMSSTV 141

Query: 190 DSSSAPSPTDASLTRFLDGSHPPAISRPIFFFDAFAQAEKMSDFHRTVTVAVAGGSASDS 249
           +S S P PT          +  PA ++                + RT  V      +   
Sbjct: 142 ESFSGPRPT----------TMKPATTK---------------RYPRTPPVVPEDCHSDCD 201

[Close]

BLAST of CmaCh01G012220.1 vs. TAIR 10
Match: AT3G20310.1 (ethylene response factor 7 )

HSP 1 Score: 109.8 bits (273), Expect = 3.3e-24
Identity = 86/221 (38.91%), Postives = 111/221 (50.23%), Query Frame = 0


Query: 70  AVVEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAAREFRGANAKT 129
           +V E RYRGVRKRPWGR+AAEIRDP KK+RVWLGTF++A +AARAYDTAAR  RG  AKT
Sbjct: 21  SVKEPRYRGVRKRPWGRFAAEIRDPLKKSRVWLGTFDSAVDAARAYDTAARNLRGPKAKT 80

Query: 130 NFP---------TPNEYLVDDN---------------------NNKFRR-------STCS 189
           NFP          P  YL + N                        F+        S  +
Sbjct: 81  NFPIDCSPSSPLQPLTYLHNQNLCSPPVIQNQIDPFMDHRLYGGGNFQEQQQQQIISRPA 140

Query: 190 SPSESSTVDSSSAPSPTDASLTRFLDGSHPPAISRPIFFFDAFAQAEKMSDFHRTVTVAV 249
           S S SSTV S S P P +A+       +   ++++P+           +  + RT  VA 
Sbjct: 141 SSSMSSTVKSCSGPRPMEAA-------AASSSVAKPL---------HAIKRYPRTPPVAP 200

The following BLAST results are available for this feature:

BLAST of CmaCh01G012220.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80340	1.8e-35	48.83	Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
Q40477	5.3e-27	43.44	Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum OX=4097 GN=ERF4 ...	[more]
Q9MAI5	9.9e-26	46.74	Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
Q9LW49	2.9e-25	41.96	Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ER...	[more]
Q9FE67	6.4e-25	67.05	Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]

BLAST of CmaCh01G012220.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IXY7	4.1e-99	100.00	ethylene-responsive transcription factor 4 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1FTH9	6.1e-95	96.88	ethylene-responsive transcription factor 4 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1CD65	1.5e-69	76.65	ethylene-responsive transcription factor 4 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A5A7VEL4	1.3e-65	77.55	Ethylene-responsive transcription factor 4 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3CLM9	1.3e-65	77.55	ethylene-responsive transcription factor 4 OS=Cucumis melo OX=3656 GN=LOC1035018...	[more]

BLAST of CmaCh01G012220.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022981946.1	8.5e-99	100.00	ethylene-responsive transcription factor 4 [Cucurbita maxima]	[more]
KAG6607891.1	5.1e-96	97.38	Ethylene-responsive transcription factor 4, partial [Cucurbita argyrosperma subs...	[more]
XP_022941385.1	1.3e-94	96.88	ethylene-responsive transcription factor 4 [Cucurbita moschata] >KAG7037418.1 Et...	[more]
XP_023525528.1	1.4e-93	96.35	ethylene-responsive transcription factor 4-like [Cucurbita pepo subsp. pepo]	[more]
XP_038897001.1	1.1e-69	77.23	ethylene-responsive transcription factor 4 [Benincasa hispida]	[more]

BLAST of CmaCh01G012220.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15210.1	1.3e-36	48.83	ethylene responsive element binding factor 4	[more]
AT1G53170.1	7.1e-27	46.74	ethylene response factor 8	[more]
AT5G44210.1	4.6e-26	67.05	erf domain protein 9	[more]
AT1G50640.1	1.5e-24	41.31	ethylene responsive element binding factor 3	[more]
AT3G20310.1	3.3e-24	38.91	ethylene response factor 7	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 76..87 score: 66.67 coord: 98..114 score: 74.65
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 75..138 e-value: 5.3E-37 score: 138.9
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 75..124 e-value: 6.0E-14 score: 52.0
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 75..132 score: 24.539518
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 75..132 e-value: 5.78702E-32 score: 110.054
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 74..133 e-value: 3.5E-28 score: 99.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 214..238
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..178
None	No IPR available	PANTHER	PTHR31677:SF156	ERF FAMILY PROTEIN	coord: 183..238 coord: 66..172
None	No IPR available	PANTHER	PTHR31677	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 183..238 coord: 66..172
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 75..133

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh01G012220	CmaCh01G012220	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh01G012220.1:exon:1853	CmaCh01G012220.1:exon:1853	exon
CmaCh01G012220.1:exon:1854	CmaCh01G012220.1:exon:1854	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh01G012220.1:cds	CmaCh01G012220.1:cds_2	CDS
CmaCh01G012220.1:cds	CmaCh01G012220.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh01G012220.1	CmaCh01G012220.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity