CmaCh01G011380.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh01G011380.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	DNA replication regulator sld2 like
Location	Cma_Chr01: 8332551 .. 8333057 (+)
Sequence length	507
RNA-Seq Expression	CmaCh01G011380.1
Synteny	CmaCh01G011380.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCTAAAACCGCAATCTACCAAAGGTGGCGGAGGATCCATCAAGGTTGGAGCGACCGGAACGATTAGTTCGTTGATGACAAGGGAATTAGAGACGATGAGATCCGGCCCCAAGAAGTTGGTCACTTCCAAAAACAAATGTTCATCAGCTACTTCAGCTAGTTCATCTGCTGCTTCCATTCCTAAAAGATTGCAACAAACTAAATCATTTGATGAGGTAAACAATGGTAGAAGATACAGTACTGTTAATAGCAGAAGTTTTGGGAACTCTCATAACACTACTAAGGCCGCTGGTTCGAGGGATGTCCACCGGATACCAATGCTTGGTTCTGATACTCATGCAAATGAAAATGGCTATAGAGACAAACCAGAAAGGAAAGGACTTAGAGCAGTTGCAATTGTGGACGTAAAGTGCAATAACCCTGATAAAGCTTGGGCTAGCCGTCCTCTATCAAGTCGACTCCGAAAACTCGGGTTTTCGAAGCTGTCTGAAACCTTTGCTTGA

mRNA sequence

ATGGTTCTAAAACCGCAATCTACCAAAGGTGGCGGAGGATCCATCAAGGTTGGAGCGACCGGAACGATTAGTTCGTTGATGACAAGGGAATTAGAGACGATGAGATCCGGCCCCAAGAAGTTGGTCACTTCCAAAAACAAATGTTCATCAGCTACTTCAGCTAGTTCATCTGCTGCTTCCATTCCTAAAAGATTGCAACAAACTAAATCATTTGATGAGGTAAACAATGGTAGAAGATACAGTACTGTTAATAGCAGAAGTTTTGGGAACTCTCATAACACTACTAAGGCCGCTGGTTCGAGGGATGTCCACCGGATACCAATGCTTGGTTCTGATACTCATGCAAATGAAAATGGCTATAGAGACAAACCAGAAAGGAAAGGACTTAGAGCAGTTGCAATTGTGGACGTAAAGTGCAATAACCCTGATAAAGCTTGGGCTAGCCGTCCTCTATCAAGTCGACTCCGAAAACTCGGGTTTTCGAAGCTGTCTGAAACCTTTGCTTGA

Coding sequence (CDS)

ATGGTTCTAAAACCGCAATCTACCAAAGGTGGCGGAGGATCCATCAAGGTTGGAGCGACCGGAACGATTAGTTCGTTGATGACAAGGGAATTAGAGACGATGAGATCCGGCCCCAAGAAGTTGGTCACTTCCAAAAACAAATGTTCATCAGCTACTTCAGCTAGTTCATCTGCTGCTTCCATTCCTAAAAGATTGCAACAAACTAAATCATTTGATGAGGTAAACAATGGTAGAAGATACAGTACTGTTAATAGCAGAAGTTTTGGGAACTCTCATAACACTACTAAGGCCGCTGGTTCGAGGGATGTCCACCGGATACCAATGCTTGGTTCTGATACTCATGCAAATGAAAATGGCTATAGAGACAAACCAGAAAGGAAAGGACTTAGAGCAGTTGCAATTGTGGACGTAAAGTGCAATAACCCTGATAAAGCTTGGGCTAGCCGTCCTCTATCAAGTCGACTCCGAAAACTCGGGTTTTCGAAGCTGTCTGAAACCTTTGCTTGA

Protein sequence

MVLKPQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNKCSSATSASSSAASIPKRLQQTKSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGSRDVHRIPMLGSDTHANENGYRDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA

Homology

[Close]

BLAST of CmaCh01G011380.1 vs. ExPASy TrEMBL
Match: A0A6J1IX41 (uncharacterized protein LOC111480697 OS=Cucurbita maxima OX=3661 GN=LOC111480697 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 6.6e-85
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MVLKPQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNKCSSATSASSSAAS 60
           MVLKPQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNKCSSATSASSSAAS
Sbjct: 1   MVLKPQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNKCSSATSASSSAAS 60

Query: 61  IPKRLQQTKSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGSRDVHRIPMLGSDTHANENGY 120
           IPKRLQQTKSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGSRDVHRIPMLGSDTHANENGY
Sbjct: 61  IPKRLQQTKSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGSRDVHRIPMLGSDTHANENGY 120

Query: 121 RDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA 169
           RDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA
Sbjct: 121 RDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA 168

[Close]

BLAST of CmaCh01G011380.1 vs. ExPASy TrEMBL
Match: A0A6J1FHN9 (uncharacterized protein LOC111445874 OS=Cucurbita moschata OX=3662 GN=LOC111445874 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.0e-81
Identity = 164/168 (97.62%), Postives = 165/168 (98.21%), Query Frame = 0


Query: 1   MVLKPQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNKCSSATSASSSAAS 60
           MVLK QSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNK SSATSASS AAS
Sbjct: 1   MVLKLQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNKSSSATSASSFAAS 60

Query: 61  IPKRLQQTKSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGSRDVHRIPMLGSDTHANENGY 120
           IPKRLQQ+KSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGSRDVHRIPMLGSDTHANENGY
Sbjct: 61  IPKRLQQSKSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGSRDVHRIPMLGSDTHANENGY 120

Query: 121 RDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA 169
           RDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA
Sbjct: 121 RDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA 168

[Close]

BLAST of CmaCh01G011380.1 vs. ExPASy TrEMBL
Match: A0A6J1CGE9 (uncharacterized protein LOC111010581 OS=Momordica charantia OX=3673 GN=LOC111010581 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 9.6e-60
Identity = 130/172 (75.58%), Postives = 151/172 (87.79%), Query Frame = 0


Query: 1   MVLKPQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNK--CSSATSASSSA 60
           M  K QS KGGGGSIKVGATGTISSLM RELE+MRSGP+K V SKNK   S+ T+++SSA
Sbjct: 1   MAQKLQSIKGGGGSIKVGATGTISSLMMRELESMRSGPQKSVASKNKSLSSTTTTSTSSA 60

Query: 61  ASIPKRLQQTKSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGSRDVHRIPMLGSDTHANE- 120
           ASIPKRLQQ++S DEV+NGRRY++VN+RSFGNSHN+TK + SRDVHR+PMLGS+ +  + 
Sbjct: 61  ASIPKRLQQSRSLDEVSNGRRYNSVNNRSFGNSHNSTKTS-SRDVHRMPMLGSNDNYTDG 120

Query: 121 -NGYRDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA 169
            N YR KPERKGLRAVAIVDVKCNNPD+AWASRPLS+RLRKLGF+KLSETFA
Sbjct: 121 NNSYRGKPERKGLRAVAIVDVKCNNPDRAWASRPLSNRLRKLGFAKLSETFA 171

[Close]

BLAST of CmaCh01G011380.1 vs. ExPASy TrEMBL
Match: A0A0A0LAQ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G426360 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 3.4e-57
Identity = 132/171 (77.19%), Postives = 146/171 (85.38%), Query Frame = 0


Query: 1   MVLKPQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNKCSSA--TSASSSA 60
           MV K Q  KGGGGS+KVGATGTISSLM RELE+MRS  KK VTSKNK SSA  T+  SSA
Sbjct: 1   MVQKLQPIKGGGGSVKVGATGTISSLMMRELESMRSASKKPVTSKNKSSSAATTTTVSSA 60

Query: 61  ASIPKRLQQTKSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGSRDVHRIPMLGS-DTHANE 120
           ASIPKRL Q+KSF EV++ RRY++VN+RSFGNSHN TK  GSRDVHR+PML S D + + 
Sbjct: 61  ASIPKRLGQSKSFVEVSD-RRYNSVNNRSFGNSHNATK-TGSRDVHRMPMLSSNDVYTDG 120

Query: 121 NGYRDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA 169
           N YR+KPERKGLRAVAIVDVKCNNPD+AWASRPLSSRLRKLGFSKLSETFA
Sbjct: 121 NSYREKPERKGLRAVAIVDVKCNNPDRAWASRPLSSRLRKLGFSKLSETFA 169

[Close]

BLAST of CmaCh01G011380.1 vs. ExPASy TrEMBL
Match: A0A5D3B9E2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold441G00050 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 4.4e-57
Identity = 132/172 (76.74%), Postives = 146/172 (84.88%), Query Frame = 0


Query: 1   MVLKPQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNKCSSATSAS---SS 60
           MV K Q  KGGGGSIKVGATGTISSLM RELE+MRS  KK VTSKNK SSAT+ +   SS
Sbjct: 1   MVQKLQPIKGGGGSIKVGATGTISSLMMRELESMRSASKKPVTSKNKSSSATTTTTTVSS 60

Query: 61  AASIPKRLQQTKSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGSRDVHRIPMLGS-DTHAN 120
           A SIPKRL Q+KSF EV++ RRY++VN+RSFGNSHN TK  GSRDVHR+PML S D + +
Sbjct: 61  ATSIPKRLGQSKSFVEVSD-RRYNSVNNRSFGNSHNATK-TGSRDVHRMPMLSSNDVYTD 120

Query: 121 ENGYRDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA 169
            N YR+KPERKGLRAVAIVDVKCNNPD+AWASRPLSSRLRKLGFSKLSETFA
Sbjct: 121 GNSYREKPERKGLRAVAIVDVKCNNPDRAWASRPLSSRLRKLGFSKLSETFA 170

[Close]

BLAST of CmaCh01G011380.1 vs. NCBI nr
Match: XP_022981635.1 (uncharacterized protein LOC111480697 [Cucurbita maxima] >XP_022981636.1 uncharacterized protein LOC111480697 [Cucurbita maxima] >XP_022981637.1 uncharacterized protein LOC111480697 [Cucurbita maxima])

HSP 1 Score: 323.2 bits (827), Expect = 1.4e-84
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MVLKPQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNKCSSATSASSSAAS 60
           MVLKPQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNKCSSATSASSSAAS
Sbjct: 1   MVLKPQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNKCSSATSASSSAAS 60

Query: 61  IPKRLQQTKSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGSRDVHRIPMLGSDTHANENGY 120
           IPKRLQQTKSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGSRDVHRIPMLGSDTHANENGY
Sbjct: 61  IPKRLQQTKSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGSRDVHRIPMLGSDTHANENGY 120

Query: 121 RDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA 169
           RDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA
Sbjct: 121 RDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA 168

[Close]

BLAST of CmaCh01G011380.1 vs. NCBI nr
Match: KAG7015205.1 (hypothetical protein SDJN02_22838, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 313.9 bits (803), Expect = 8.3e-82
Identity = 165/168 (98.21%), Postives = 166/168 (98.81%), Query Frame = 0


Query: 1   MVLKPQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNKCSSATSASSSAAS 60
           MVLK QSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNK SSATSASSSAAS
Sbjct: 1   MVLKLQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNKSSSATSASSSAAS 60

Query: 61  IPKRLQQTKSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGSRDVHRIPMLGSDTHANENGY 120
           IPKRLQQ+KSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGSRDVHRIPMLGSDTHANENGY
Sbjct: 61  IPKRLQQSKSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGSRDVHRIPMLGSDTHANENGY 120

Query: 121 RDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA 169
           RDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA
Sbjct: 121 RDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA 168

[Close]

BLAST of CmaCh01G011380.1 vs. NCBI nr
Match: XP_023523864.1 (uncharacterized protein LOC111787980 [Cucurbita pepo subsp. pepo] >XP_023523865.1 uncharacterized protein LOC111787980 [Cucurbita pepo subsp. pepo] >XP_023523867.1 uncharacterized protein LOC111787980 [Cucurbita pepo subsp. pepo] >XP_023523868.1 uncharacterized protein LOC111787980 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 313.9 bits (803), Expect = 8.3e-82
Identity = 163/168 (97.02%), Postives = 166/168 (98.81%), Query Frame = 0


Query: 1   MVLKPQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNKCSSATSASSSAAS 60
           MVLKPQSTKGGGGSIKVGATGTISSLMTRELETMR+GP+KLVTSKNK SSATSASSSAAS
Sbjct: 1   MVLKPQSTKGGGGSIKVGATGTISSLMTRELETMRAGPQKLVTSKNKSSSATSASSSAAS 60

Query: 61  IPKRLQQTKSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGSRDVHRIPMLGSDTHANENGY 120
           IPKRLQQTKSFDEVNNGRRY+TVNSRSFGNSHNTTKA GSRDVHRIPMLGSDTHANENGY
Sbjct: 61  IPKRLQQTKSFDEVNNGRRYNTVNSRSFGNSHNTTKAGGSRDVHRIPMLGSDTHANENGY 120

Query: 121 RDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA 169
           RDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA
Sbjct: 121 RDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA 168

[Close]

BLAST of CmaCh01G011380.1 vs. NCBI nr
Match: XP_022940165.1 (uncharacterized protein LOC111445874 [Cucurbita moschata] >XP_022940166.1 uncharacterized protein LOC111445874 [Cucurbita moschata] >XP_022940167.1 uncharacterized protein LOC111445874 [Cucurbita moschata] >XP_022940168.1 uncharacterized protein LOC111445874 [Cucurbita moschata])

HSP 1 Score: 311.6 bits (797), Expect = 4.1e-81
Identity = 164/168 (97.62%), Postives = 165/168 (98.21%), Query Frame = 0


Query: 1   MVLKPQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNKCSSATSASSSAAS 60
           MVLK QSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNK SSATSASS AAS
Sbjct: 1   MVLKLQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNKSSSATSASSFAAS 60

Query: 61  IPKRLQQTKSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGSRDVHRIPMLGSDTHANENGY 120
           IPKRLQQ+KSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGSRDVHRIPMLGSDTHANENGY
Sbjct: 61  IPKRLQQSKSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGSRDVHRIPMLGSDTHANENGY 120

Query: 121 RDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA 169
           RDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA
Sbjct: 121 RDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA 168

[Close]

BLAST of CmaCh01G011380.1 vs. NCBI nr
Match: XP_022139743.1 (uncharacterized protein LOC111010581 [Momordica charantia])

HSP 1 Score: 239.6 bits (610), Expect = 2.0e-59
Identity = 130/172 (75.58%), Postives = 151/172 (87.79%), Query Frame = 0


Query: 1   MVLKPQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNK--CSSATSASSSA 60
           M  K QS KGGGGSIKVGATGTISSLM RELE+MRSGP+K V SKNK   S+ T+++SSA
Sbjct: 1   MAQKLQSIKGGGGSIKVGATGTISSLMMRELESMRSGPQKSVASKNKSLSSTTTTSTSSA 60

Query: 61  ASIPKRLQQTKSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGSRDVHRIPMLGSDTHANE- 120
           ASIPKRLQQ++S DEV+NGRRY++VN+RSFGNSHN+TK + SRDVHR+PMLGS+ +  + 
Sbjct: 61  ASIPKRLQQSRSLDEVSNGRRYNSVNNRSFGNSHNSTKTS-SRDVHRMPMLGSNDNYTDG 120

Query: 121 -NGYRDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA 169
            N YR KPERKGLRAVAIVDVKCNNPD+AWASRPLS+RLRKLGF+KLSETFA
Sbjct: 121 NNSYRGKPERKGLRAVAIVDVKCNNPDRAWASRPLSNRLRKLGFAKLSETFA 171

[Close]

BLAST of CmaCh01G011380.1 vs. TAIR 10
Match: AT5G54850.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 107.5 bits (267), Expect = 1.1e-23
Identity = 79/201 (39.30%), Postives = 112/201 (55.72%), Query Frame = 0


Query: 1   MVLKPQSTKGGGGSIKVGATGTISSLMTRELETMR-SGPKKLVTSKNKCSSATSAS-SSA 60
           MV K +  KGGGGSIK+GATGT+++LMTREL++M+ + PK   T   + +   S    ++
Sbjct: 1   MVQKLEQIKGGGGSIKIGATGTVATLMTRELDSMKQTSPKTPTTRPIRTTIPVSVDCGTS 60

Query: 61  ASIPKRLQQTKSFDE------VNN-----GRRYSTVNSRSFGNSHN--TTKAAGSRDVHR 120
           +S P+R +  KS DE      VNN     G    T +  S   S N  T+K   ++ +H+
Sbjct: 61  SSTPRRTKPRKSSDEASSSSNVNNVRTPKGHNAKTTHQLSMLGSDNVRTSKGHNAKSIHQ 120

Query: 121 IPMLGSDTHANENGYRD-------------------KPER-KGLRAVAIVDVKCNNPDKA 167
           + MLGSD      G+ +                    P R K +  V IVDVKC NPD+A
Sbjct: 121 LSMLGSDNVRTPKGHHNTKSTHQLPMLGSENVSLQGTPRREKRMNIVEIVDVKCGNPDRA 180

The following BLAST results are available for this feature:

BLAST of CmaCh01G011380.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh01G011380.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IX41	6.6e-85	100.00	uncharacterized protein LOC111480697 OS=Cucurbita maxima OX=3661 GN=LOC111480697...	[more]
A0A6J1FHN9	2.0e-81	97.62	uncharacterized protein LOC111445874 OS=Cucurbita moschata OX=3662 GN=LOC1114458...	[more]
A0A6J1CGE9	9.6e-60	75.58	uncharacterized protein LOC111010581 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A0A0LAQ8	3.4e-57	77.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G426360 PE=4 SV=1	[more]
A0A5D3B9E2	4.4e-57	76.74	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of CmaCh01G011380.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022981635.1	1.4e-84	100.00	uncharacterized protein LOC111480697 [Cucurbita maxima] >XP_022981636.1 uncharac...	[more]
KAG7015205.1	8.3e-82	98.21	hypothetical protein SDJN02_22838, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023523864.1	8.3e-82	97.02	uncharacterized protein LOC111787980 [Cucurbita pepo subsp. pepo] >XP_023523865....	[more]
XP_022940165.1	4.1e-81	97.62	uncharacterized protein LOC111445874 [Cucurbita moschata] >XP_022940166.1 unchar...	[more]
XP_022139743.1	2.0e-59	75.58	uncharacterized protein LOC111010581 [Momordica charantia]	[more]

BLAST of CmaCh01G011380.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54850.1	1.1e-23	39.30	unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..126
None	No IPR available	PANTHER	PTHR36405:SF1	BNAA10G09140D PROTEIN	coord: 1..168
None	No IPR available	PANTHER	PTHR36405	BNAA10G09140D PROTEIN	coord: 1..168

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh01G011380	CmaCh01G011380	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh01G011380.1:exon:1001	CmaCh01G011380.1:exon:1001	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh01G011380.1:cds	CmaCh01G011380.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh01G011380.1	CmaCh01G011380.1-protein	polypeptide