CmUC10G196290.1 (mRNA) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGGTCCCCATCTACACTACACTCCCTATACCAATTAATTTCGTGCCTATAAGATATTTCACTTCCTTCATTCAAAATCAAATTATATCACCCCCTTCTACCATAATAAGCTACTGAAATAAATACAATAAAATAAAATAAATCGCTCCCAATTTTTCAAAAATCCCTAAAAAAAATATGGCGAGAGAGATCCCAAAATCTAGCAATGAAGAAGCGTTCATCTCCTTGGGAAGCGAATACTCCGATCCTCAACAATCCTTCTTCCGCGACCGATTTTACGAACTTTACCCTCCGGAGTTCTCAAGAAAGGTACGGATTTATGATTAATTTTGTTATTTTGGTTGAATTTGAAGTGATTAGTTTGTGATCGGTGGAATTTTGCGGTGGTTTAGCTTGTGGCGGAGGTGATTGCGACGTATTTGCTTGTGTTCGTGACGTGTGGGGCGGCGGCATTGAGTGTTGGTCATGAACGGGAAGTGTCGAAGCTTGGAGCATCGATTTCCGGTGGACTGATTGTGACGGTGATGATTTACGCCGTCGGACATATCTCCGGCGCCCATATGAATCCGGCCGTTACTTTTGCTTTTGCTGCTGTTCGGCGATTTCCATGGAACCAGGTCCCTTCTTCTTCCTTCTCCTAAAAACCTTCTCAGTTTCCCCCAATTTTGTGTGAATTTACTATCTTATCCTTTTGCTTTTTTTATTTTTATTTTTATAACATTTCCTTAATTTAATTTTGTTAAATTTGTTCCAAATTAACAGAATTGCCTACTTAGTTAATTGATTTTTTTTTTCAGTCTTGGTTGTGGAAATAAATGGATAGAGTAACATTAAGGAGAAAAAGTATTTTACACTTTTTACTTTGGAATTTAATTTTTATTCGATTTTAATTTGATTTTCAAGTTTAAAAATGTTACATTTTGACAATTAAATTTTGCATTTGATTTTCATTTGGTCCTTAAATTTTAATATTTTATACTTTTAGTCTCAAGTTCATTACTAATGCTTACTTTTGGATCTTTGATATTAACTTCCAATAAATAATTTTAAGTCATTGTAATATGAAAAAAATTAAGTAATTTCAATAGTGATAGAAAATTAGTGAAAACTAATTTAATTATAATTAATTTATTCATTTAAAATTAATAATGGGAAGTTCATAGTTAGTGAGTTAGTGAAAAATGATGAGTAAAAAGGGTTGTTTTAAATTTAGAGGCAAAATAGAAACAAAATTTAAAATTTAATATTAAAATTATAAAATATATAGACCAAATAAAAAATTAAATTCGAAATTCATGGTACGGTAACATTGTGATTGTGAGAGACCAATTGAAACCCGCACACAAAATTTAAGAATTGAAAATTTCTTTTTCCCTACCATTAAATATGTGTGGTAATATTAAAGTGTGCTTTTCTTAAAAGCATAAGGTGGCTTAGTTGATATGTGTCCTGAGAATATATGCATATGTGGAAATAGAATAATAACAAAGGACAAAATAATTTCTCTTTTATTTTGACATCTAGAAAACAAATCAAAATAATAAATATTCATTACTAAAGTAAAAATTTTAAAAAATAAAAAATAAAAAATAGGTTATTTGTTACTTATATTATTTGTTCAATTAAAATTATATATAATATATTAAATAATAAAATTTTGGGACAAAATATTTCAAACTTTATATACCAACCACCCTGAATCTAAAGATTTTTTTGTTTTTTTTGGAGGTTACCCTGAATCTAAAAGTTTGAATTATAAGTGTACTCTCTTACTTAATAATTAAGAAAAAACTCAAATCAATTTTTTTCTATTTTTTTTAAGAATTCAACTCAATCAATTGATGGATGATATATATATATTATTGGTTGGGCGGAGATTAATTATAATTTTCTAAGTTGAAATTTAGTGTTAATGATGTATGAGTTATGCCACTTCATCAAAAAGCAAAAAGGAAAAAAATGCAATTTATGCCACGTAAGAAATGACGTGGATGAGATGTAGTGGAGATATTTTGAGGAGGGTCCCACCAGGGTGGCAGATATTTATAAAGTGAAGGAGTATTGGCAGATACTTACTAGGAAAGCAGCCTTAATTGTTTTTTTAAATCACCAAACGACATCATAATTGAGAATATAAATTCTTTTGTTGACGAATATGCTATTGCATCTTTTTCCATTTTGAACATTCAAATGTTTTTTCGTAGTCTTTTTCTATTTTATTTTCAAACTTATATAGTTTTTTAATTGTGAACTTATGCAGATGAACAAAATTGTTACTCTAAAAAAGAAATTAATCTGAATTGAATTCTTTGTGTTGATGCAGGTTCCACTGTATGCAGCAGCTCAATTCAGTGGAGCTACAACAGCAGCCTTTACATTGCGCATATTATTGGACCCAATTCAAGACTTAGGTACAACTTCACCTTCTGGACCAGCGTCTAAAGCACTCCTCATGGAGATTGTTGTCTCATTCTGTATGATGTTTGTCACATCTGCGGTTGCTACCGACACAAAAGCTGTAAGAACATCTTGTTATTGTTAACCAAAGCTCTTCCTCCCAACCTTCTCTTAATTTCACTTGGCTAAGGTTCTCTGTTTTTGATTTGTGATTTTTGGCAGATAGGAGAGCTTGGAGGCATAGCAGTGGGGTCAGCTGTATGTATCACATCCATCTTTGCTGGGTAAGCAAAACAAATAACAGTTGTTTTAATTTGGCTTTTTATTCTGTAAAAGCTTTCTGGCTATTTAGGGAAAATCTCAAGGATGATCTTAATTTGGTTAAATTACAAATTTGTCCCTCTAACTTGGAGAAAGTTAACTTAGTCCTTATGATTTATAATTAGAATTTAGTTTTTATGGTTAATACATTCTAATGAACAGTCTCTACGACAGGACTATGAAATTTTTTTCCAACCATGAGAACTAAATTCTAACTTTCTCCAAATTGTAGAGACAAATTTGTAATTAAACCTTAAAACTTATTCCATGTCCAACAACATACGCATATAATGGAGGGAAAAGTATCTTTTTAGTCTCGAGTTTTGAAAAATAGGTCCATTTGGTCCATGAATTTTCAAAATGTAACTTTTTAGTTTATGAATTTCTAAGAATAGATGTGTTTGGTCCTTAAATTTTCAAAATGACTTTTAGTTCGAATAAATTTAAAAGATCTTTGAAGTAATTTTCTCATTATAAATTATTTAATTTAAAATAATAATAAAAAAATATATTTGAAAAACTCAAAGATCAAATACACATATTTTTCAAAAGTTGAAGACTAAAAATGTATATTTTAAAAATTTAGAGATCAATCACACACATACTTCAAAATTCGGAGACTAAGAAGACAAAATTTTGAATATATATATAAGCTCAAGAGATAAAATGTAATATAAGTTGGGTGAACCATGTGTAGGCCAATATCGGGTGGGTCGATGAACCCAGCAAGGTCAATTGGACCAGCGATTGCAAGTTCACATTACGAAGGGATTTGGGTGTACTTGGTCGGCCCAGTTACTGGTACATTGCTTGGGGCATTTTCATATAACTTCGTACGAGCCACTGAAAAACATACCCATCCACTCTCTTTACATTGACATTCAATCAATCTGGGTGATGGTAGATGTTCAAATCATATCAATGAGTTTATTGTATAAAAGGCGTATGTTGTATAAAAGGTGTAACGTTTTAACTTTAAGTTGTATTTTTCTGTATTTTTTTTATTTTTTTTAAAGGTGAGGTTAGATTTAATTTTCAATTTCTTATGCAATTTTTTTTTTTTCTTTTATAGTTTTGAGAGAAGAATGGATCTGAAATAGGGGGTCCATTCTTTTGTTATTTTACAAGTGTGAGCTTTGGTCTGAGTTTTGTATGATAATTAATCAGAAAATTGATTCTTCTTTTCAAGTTAACTGTCGAGAATTTTTGTTTTTGTTTTTATTGTTTGATGGACT TTGGTCCCCATCTACACTACACTCCCTATACCAATTAATTTCGTGCCTATAAGATATTTCACTTCCTTCATTCAAAATCAAATTATATCACCCCCTTCTACCATAATAAGCTACTGAAATAAATACAATAAAATAAAATAAATCGCTCCCAATTTTTCAAAAATCCCTAAAAAAAATATGGCGAGAGAGATCCCAAAATCTAGCAATGAAGAAGCGTTCATCTCCTTGGGAAGCGAATACTCCGATCCTCAACAATCCTTCTTCCGCGACCGATTTTACGAACTTTACCCTCCGGAGTTCTCAAGAAAGCTTGTGGCGGAGGTGATTGCGACGTATTTGCTTGTGTTCGTGACGTGTGGGGCGGCGGCATTGAGTGTTGGTCATGAACGGGAAGTGTCGAAGCTTGGAGCATCGATTTCCGGTGGACTGATTGTGACGGTGATGATTTACGCCGTCGGACATATCTCCGGCGCCCATATGAATCCGGCCGTTACTTTTGCTTTTGCTGCTGTTCGGCGATTTCCATGGAACCAGGTTCCACTGTATGCAGCAGCTCAATTCAGTGGAGCTACAACAGCAGCCTTTACATTGCGCATATTATTGGACCCAATTCAAGACTTAGGTACAACTTCACCTTCTGGACCAGCGTCTAAAGCACTCCTCATGGAGATTGTTGTCTCATTCTGTATGATGTTTGTCACATCTGCGGTTGCTACCGACACAAAAGCTATAGGAGAGCTTGGAGGCATAGCAGTGGGGTCAGCTGTATGTATCACATCCATCTTTGCTGGGCCAATATCGGGTGGGTCGATGAACCCAGCAAGGTCAATTGGACCAGCGATTGCAAGTTCACATTACGAAGGGATTTGGGTGTACTTGGTCGGCCCAGTTACTGGTACATTGCTTGGGGCATTTTCATATAACTTCGTACGAGCCACTGAAAAACATACCCATCCACTCTCTTTACATTGACATTCAATCAATCTGGGTGATGGTAGATGTTCAAATCATATCAATGAGTTTATTGTATAAAAGGCGTATGTTGTATAAAAGGTGTAACGTTTTAACTTTAAGTTGTATTTTTCTGTATTTTTTTTATTTTTTTTAAAGGTGAGGTTAGATTTAATTTTCAATTTCTTATGCAATTTTTTTTTTTTCTTTTATAGTTTTGAGAGAAGAATGGATCTGAAATAGGGGGTCCATTCTTTTGTTATTTTACAAGTGTGAGCTTTGGTCTGAGTTTTGTATGATAATTAATCAGAAAATTGATTCTTCTTTTCAAGTTAACTGTCGAGAATTTTTGTTTTTGTTTTTATTGTTTGATGGACT ATGGCGAGAGAGATCCCAAAATCTAGCAATGAAGAAGCGTTCATCTCCTTGGGAAGCGAATACTCCGATCCTCAACAATCCTTCTTCCGCGACCGATTTTACGAACTTTACCCTCCGGAGTTCTCAAGAAAGCTTGTGGCGGAGGTGATTGCGACGTATTTGCTTGTGTTCGTGACGTGTGGGGCGGCGGCATTGAGTGTTGGTCATGAACGGGAAGTGTCGAAGCTTGGAGCATCGATTTCCGGTGGACTGATTGTGACGGTGATGATTTACGCCGTCGGACATATCTCCGGCGCCCATATGAATCCGGCCGTTACTTTTGCTTTTGCTGCTGTTCGGCGATTTCCATGGAACCAGGTTCCACTGTATGCAGCAGCTCAATTCAGTGGAGCTACAACAGCAGCCTTTACATTGCGCATATTATTGGACCCAATTCAAGACTTAGGTACAACTTCACCTTCTGGACCAGCGTCTAAAGCACTCCTCATGGAGATTGTTGTCTCATTCTGTATGATGTTTGTCACATCTGCGGTTGCTACCGACACAAAAGCTATAGGAGAGCTTGGAGGCATAGCAGTGGGGTCAGCTGTATGTATCACATCCATCTTTGCTGGGCCAATATCGGGTGGGTCGATGAACCCAGCAAGGTCAATTGGACCAGCGATTGCAAGTTCACATTACGAAGGGATTTGGGTGTACTTGGTCGGCCCAGTTACTGGTACATTGCTTGGGGCATTTTCATATAACTTCGTACGAGCCACTGAAAAACATACCCATCCACTCTCTTTACATTGA MAREIPKSSNEEAFISLGSEYSDPQQSFFRDRFYELYPPEFSRKLVAEVIATYLLVFVTCGAAALSVGHEREVSKLGASISGGLIVTVMIYAVGHISGAHMNPAVTFAFAAVRRFPWNQVPLYAAAQFSGATTAAFTLRILLDPIQDLGTTSPSGPASKALLMEIVVSFCMMFVTSAVATDTKAIGELGGIAVGSAVCITSIFAGPISGGSMNPARSIGPAIASSHYEGIWVYLVGPVTGTLLGAFSYNFVRATEKHTHPLSLH Homology
BLAST of CmUC10G196290.1 vs. NCBI nr
Match: XP_038906096.1 (aquaporin NIP2-2-like [Benincasa hispida]) HSP 1 Score: 458.4 bits (1178), Expect = 4.3e-125 Identity = 245/268 (91.42%), Postives = 249/268 (92.91%), Query Frame = 0
BLAST of CmUC10G196290.1 vs. NCBI nr
Match: XP_023528272.1 (aquaporin NIP2-1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 437.2 bits (1123), Expect = 1.0e-118 Identity = 224/256 (87.50%), Postives = 243/256 (94.92%), Query Frame = 0
BLAST of CmUC10G196290.1 vs. NCBI nr
Match: AKB95556.1 (silicon transporter 3 [Cucurbita ficifolia]) HSP 1 Score: 434.1 bits (1115), Expect = 8.6e-118 Identity = 223/256 (87.11%), Postives = 241/256 (94.14%), Query Frame = 0
BLAST of CmUC10G196290.1 vs. NCBI nr
Match: XP_022983857.1 (aquaporin NIP2-1-like [Cucurbita maxima]) HSP 1 Score: 434.1 bits (1115), Expect = 8.6e-118 Identity = 222/256 (86.72%), Postives = 242/256 (94.53%), Query Frame = 0
BLAST of CmUC10G196290.1 vs. NCBI nr
Match: AKH49406.1 (silicon transporter 3 [Cucurbita moschata]) HSP 1 Score: 433.0 bits (1112), Expect = 1.9e-117 Identity = 221/256 (86.33%), Postives = 242/256 (94.53%), Query Frame = 0
BLAST of CmUC10G196290.1 vs. ExPASy Swiss-Prot
Match: Q9ATN2 (Aquaporin NIP2-2 OS=Zea mays OX=4577 GN=NIP2-2 PE=2 SV=1) HSP 1 Score: 287.3 bits (734), Expect = 1.7e-76 Identity = 148/248 (59.68%), Postives = 190/248 (76.61%), Query Frame = 0
BLAST of CmUC10G196290.1 vs. ExPASy Swiss-Prot
Match: Q19KC1 (Aquaporin NIP2-1 OS=Zea mays OX=4577 GN=NIP2-1 PE=2 SV=2) HSP 1 Score: 285.8 bits (730), Expect = 5.0e-76 Identity = 141/241 (58.51%), Postives = 189/241 (78.42%), Query Frame = 0
BLAST of CmUC10G196290.1 vs. ExPASy Swiss-Prot
Match: Q67WJ8 (Aquaporin NIP2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=NIP2-2 PE=1 SV=1) HSP 1 Score: 285.8 bits (730), Expect = 5.0e-76 Identity = 147/248 (59.27%), Postives = 191/248 (77.02%), Query Frame = 0
BLAST of CmUC10G196290.1 vs. ExPASy Swiss-Prot
Match: Q9AT74 (Aquaporin NIP2-3 OS=Zea mays OX=4577 GN=NIP2-3 PE=2 SV=1) HSP 1 Score: 285.0 bits (728), Expect = 8.5e-76 Identity = 139/221 (62.90%), Postives = 178/221 (80.54%), Query Frame = 0
BLAST of CmUC10G196290.1 vs. ExPASy Swiss-Prot
Match: Q6Z2T3 (Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=NIP2-1 PE=1 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 1.1e-75 Identity = 143/244 (58.61%), Postives = 187/244 (76.64%), Query Frame = 0
BLAST of CmUC10G196290.1 vs. ExPASy TrEMBL
Match: A0A6J1J0H5 (aquaporin NIP2-1-like OS=Cucurbita maxima OX=3661 GN=LOC111482345 PE=3 SV=1) HSP 1 Score: 434.1 bits (1115), Expect = 4.2e-118 Identity = 222/256 (86.72%), Postives = 242/256 (94.53%), Query Frame = 0
BLAST of CmUC10G196290.1 vs. ExPASy TrEMBL
Match: A0A172B0F5 (Silicon transporter 3 OS=Cucurbita ficifolia OX=37645 GN=Lsi3 PE=2 SV=1) HSP 1 Score: 434.1 bits (1115), Expect = 4.2e-118 Identity = 223/256 (87.11%), Postives = 241/256 (94.14%), Query Frame = 0
BLAST of CmUC10G196290.1 vs. ExPASy TrEMBL
Match: A0A172B7P2 (Silicon transporter 3 OS=Cucurbita moschata OX=3662 GN=Lsi3 PE=2 SV=1) HSP 1 Score: 433.0 bits (1112), Expect = 9.3e-118 Identity = 221/256 (86.33%), Postives = 242/256 (94.53%), Query Frame = 0
BLAST of CmUC10G196290.1 vs. ExPASy TrEMBL
Match: A0A6J1FB40 (aquaporin NIP2-1-like OS=Cucurbita moschata OX=3662 GN=LOC111442441 PE=3 SV=1) HSP 1 Score: 433.0 bits (1112), Expect = 9.3e-118 Identity = 221/256 (86.33%), Postives = 242/256 (94.53%), Query Frame = 0
BLAST of CmUC10G196290.1 vs. ExPASy TrEMBL
Match: A0A1S3B8P6 (aquaporin NIP2-1-like OS=Cucumis melo OX=3656 GN=LOC103487003 PE=3 SV=1) HSP 1 Score: 431.0 bits (1107), Expect = 3.5e-117 Identity = 223/258 (86.43%), Postives = 238/258 (92.25%), Query Frame = 0
BLAST of CmUC10G196290.1 vs. TAIR 10
Match: AT5G37810.1 (NOD26-like intrinsic protein 4;1 ) HSP 1 Score: 223.4 bits (568), Expect = 2.1e-58 Identity = 116/223 (52.02%), Postives = 153/223 (68.61%), Query Frame = 0
BLAST of CmUC10G196290.1 vs. TAIR 10
Match: AT5G37820.1 (NOD26-like intrinsic protein 4;2 ) HSP 1 Score: 221.9 bits (564), Expect = 6.2e-58 Identity = 115/223 (51.57%), Postives = 152/223 (68.16%), Query Frame = 0
BLAST of CmUC10G196290.1 vs. TAIR 10
Match: AT4G18910.1 (NOD26-like intrinsic protein 1;2 ) HSP 1 Score: 214.2 bits (544), Expect = 1.3e-55 Identity = 111/224 (49.55%), Postives = 152/224 (67.86%), Query Frame = 0
BLAST of CmUC10G196290.1 vs. TAIR 10
Match: AT1G80760.1 (NOD26-like intrinsic protein 6;1 ) HSP 1 Score: 201.8 bits (512), Expect = 6.7e-52 Identity = 103/227 (45.37%), Postives = 147/227 (64.76%), Query Frame = 0
BLAST of CmUC10G196290.1 vs. TAIR 10
Match: AT4G19030.1 (NOD26-like major intrinsic protein 1 ) HSP 1 Score: 199.5 bits (506), Expect = 3.3e-51 Identity = 105/224 (46.88%), Postives = 146/224 (65.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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