CmUC07G140860.1 (mRNA) Watermelon (USVL531) v1

Overview


Name	CmUC07G140860.1
Type	mRNA
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	myb-like transcription factor family protein
Location	CmU531Chr07: 30111516 .. 30113767 (-)
Sequence length	1256
RNA-Seq Expression	CmUC07G140860.1
Synteny	CmUC07G140860.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTAAATAATAATAATTTTCATGCAAATAATTACAATACGTGAATATATTTTCAAAATTTATATTAAAAATATCAAAAAATAACAAAAAAGAAAATTATAAAAAGACAATAATAAACTAGTAGTGGAGGATAAATTTAAGATTTATTGAAGGGAAAAAAACTAAAATTGGACCATTACGATTAAAATTAAATAAACTTATGTCCAATCTTTTAAACTTTAATTATTTAATAAATATGATTATATATACCGCAAAATTGGGTTAAAATTATTCCTACTTCTCTTAGAATTCCTAAACTATGTTTGGTTTGGGTTCTTCCCTTATATATATGATTTGAAACAACGAATTAATTAAACCAAACTCTAAATCATTATGGATAACTACAATAGCTACTTGCCTTCTTTCCCTGTTCCTCCAAATCAGACTCTGCAGTTTGATGAATCGTCATTCCCTTCGTATTACCAAATCGATAATTCAGTGTTTGAGCAGTCGTCGATGACAATGCTGCCGCCGCCGCCGCCGCCGCCGCCGGTGATGAATATTCCGCCAAATCAGGCGATGACAATTGGCCTCCCTGGAGAATCCAAAACGAATGCGGAAATTGTTTGTGAGAATTATCTGAAGCAATATTTTAGTCCGTATGTTACCGATGATAATGTTGTGGATTATTCTAATTATGTTGATCCGTCGTTAATCAATTGGAGCTGCGAGCGAGAGGTGAACTACGATGATTCGGCTCCGGTGATGAAGTCCTCAGAGTTTGATTACTTGAATTCCGATGATATTAAGACCACACAGCAGAATTTACTTGCTTTGCCTCCGTCTGACTTCCTTTCTTCCGATGTCGTCGATTTTTACTCCACGAGGAATTGGCCGCTTGCGGCGGAGAGTAATTTGCCGTCAACGCAATTGCCGCCGCTGCCTCCTCCGCCCAAAGGAGCTGAAGCTGCGATTAATGGCGAAGCCAGCTCATCGAAGATCAAGAAGAAGGATTGGTGCGATTCCGAGCACGGGTATGGAAAAATAACAACGAAATAATTCTCTTCTTTTTATTAAATAATAGCCTATTTTTAGGGTTTTATGAAAAACATATAGGCTAAAATTGATTCAGTAAGTGACTATTTTCTATAATTTTAGTTCGTGTAAATTAATGGTTTTTTTTTTTTAAGAAATTAAATTGAAAAATTATTAAATATTTGGACTGTTTCATACCTTAATTTGTTTTATTATATATATATTTTTTTGGCAAATATCTATTTATATCCTAGGCTTTGAAGGTTGAATCAATTTAAATCCCAAATTAATAATTGTATCAAATTAAACCCTGAATTTTATTGGGTGTGTCAATTTAAACCTCAAACTAATAGTTGTATCAATTAAAATCTTAAATTTTCATTAGTGTATTAATTTAAACCATGAACTTCATAAATGTATCGATTAAAGCCCTCCATTATGTATTATGTTTTATTTGGATGCACTTGTGAAAGTTTAGGGTTTAAATTTATATATTTATGAAAATTGATATAATTATTAATTTAGGATATAAATTGATATTTGTCAAAATTATGAAAATTAAACTTATAAATATTAACTCAATTTTTTTTTTACAAAGGTTTCATTTGCCATAAGAAATTTGTTTCTGGTTTTCTACTTTTAAAAAAATTATGCTGAGTTTTCACAATTATTTTGGTAAGCTCTGATAAAAAAACAAAATCAACTATTTTAAAATATTTTTTTATAATTAAATAGTAGGTAATAAATTAGCAAAAAAAAAAAAAAAAAAAAAAAAACATTGATGAAAGCAATGCTTAAAATATTTGATGTTGACATTGATATCAAAATTTCAATTTTGATATATATGTGTAGTTTTATATTGATAAAAAATATTTAGATGAAATCTACTCCATACTTCAATCTTTAGATGAATGTAGTGTTTTTATGAACTTGATATTCAAAAACAAAATAATTAACAAATCAGTCGTATTCTAACTTTAAATTTTATAATGTAGTTTATTTTTGGTGGGATTGGATATATTTGGCAAGGGTGGTTGGAAAAACATAGCAAATGAAGTGGTAATCACAAAATCACACAAGCAAGTGGCTAGCCATGCTCAAAAGTACTTTAATCGTCAATTGTTACCAAAAGAGAAGCGCAAGAGGCCGAGTATTCATGATATCAATACCGTCGACCCTGTATTGTTGATGCAGGTGCGTGCCCGTCTCGGACTTCCACTAACATCGTCAATGCCCTAG

mRNA sequence

GTTAAATAATAATAATTTTCATGCAAATAATTACAATACGTGAATATATTTTCAAAATTTATATTAAAAATATCAAAAAATAACAAAAAAGAAAATTATAAAAAGACAATAATAAACTAGTAGTGGAGGATAAATTTAAGATTTATTGAAGGGAAAAAAACTAAAATTGGACCATTACGATTAAAATTAAATAAACTTATGTCCAATCTTTTAAACTTTAATTATTTAATAAATATGATTATATATACCGCAAAATTGGGTTAAAATTATTCCTACTTCTCTTAGAATTCCTAAACTATGTTTGGTTTGGGTTCTTCCCTTATATATATGATTTGAAACAACGAATTAATTAAACCAAACTCTAAATCATTATGGATAACTACAATAGCTACTTGCCTTCTTTCCCTGTTCCTCCAAATCAGACTCTGCAGTTTGATGAATCGTCATTCCCTTCGTATTACCAAATCGATAATTCAGTGTTTGAGCAGTCGTCGATGACAATGCTGCCGCCGCCGCCGCCGCCGCCGCCGGTGATGAATATTCCGCCAAATCAGGCGATGACAATTGGCCTCCCTGGAGAATCCAAAACGAATGCGGAAATTGTTTGTGAGAATTATCTGAAGCAATATTTTAGTCCGTATGTTACCGATGATAATGTTGTGGATTATTCTAATTATGTTGATCCGTCGTTAATCAATTGGAGCTGCGAGCGAGAGGTGAACTACGATGATTCGGCTCCGGTGATGAAGTCCTCAGAGTTTGATTACTTGAATTCCGATGATATTAAGACCACACAGCAGAATTTACTTGCTTTGCCTCCGTCTGACTTCCTTTCTTCCGATGTCGTCGATTTTTACTCCACGAGGAATTGGCCGCTTGCGGCGGAGAGTAATTTGCCGTCAACGCAATTGCCGCCGCTGCCTCCTCCGCCCAAAGGAGCTGAAGCTGCGATTAATGGCGAAGCCAGCTCATCGAAGATCAAGAAGAAGGATTGGTGCGATTCCGAGCACGGTTTATTTTTGGTGGGATTGGATATATTTGGCAAGGGTGGTTGGAAAAACATAGCAAATGAAGTGGTAATCACAAAATCACACAAGCAAGTGGCTAGCCATGCTCAAAAGTACTTTAATCGTCAATTGTTACCAAAAGAGAAGCGCAAGAGGCCGAGTATTCATGATATCAATACCGTCGACCCTGTATTGTTGATGCAGGTGCGTGCCCGTCTCGGACTTCCACTAACATCGTCAATGCCCTAG

Coding sequence (CDS)

ATGGATAACTACAATAGCTACTTGCCTTCTTTCCCTGTTCCTCCAAATCAGACTCTGCAGTTTGATGAATCGTCATTCCCTTCGTATTACCAAATCGATAATTCAGTGTTTGAGCAGTCGTCGATGACAATGCTGCCGCCGCCGCCGCCGCCGCCGCCGGTGATGAATATTCCGCCAAATCAGGCGATGACAATTGGCCTCCCTGGAGAATCCAAAACGAATGCGGAAATTGTTTGTGAGAATTATCTGAAGCAATATTTTAGTCCGTATGTTACCGATGATAATGTTGTGGATTATTCTAATTATGTTGATCCGTCGTTAATCAATTGGAGCTGCGAGCGAGAGGTGAACTACGATGATTCGGCTCCGGTGATGAAGTCCTCAGAGTTTGATTACTTGAATTCCGATGATATTAAGACCACACAGCAGAATTTACTTGCTTTGCCTCCGTCTGACTTCCTTTCTTCCGATGTCGTCGATTTTTACTCCACGAGGAATTGGCCGCTTGCGGCGGAGAGTAATTTGCCGTCAACGCAATTGCCGCCGCTGCCTCCTCCGCCCAAAGGAGCTGAAGCTGCGATTAATGGCGAAGCCAGCTCATCGAAGATCAAGAAGAAGGATTGGTGCGATTCCGAGCACGGTTTATTTTTGGTGGGATTGGATATATTTGGCAAGGGTGGTTGGAAAAACATAGCAAATGAAGTGGTAATCACAAAATCACACAAGCAAGTGGCTAGCCATGCTCAAAAGTACTTTAATCGTCAATTGTTACCAAAAGAGAAGCGCAAGAGGCCGAGTATTCATGATATCAATACCGTCGACCCTGTATTGTTGATGCAGGTGCGTGCCCGTCTCGGACTTCCACTAACATCGTCAATGCCCTAG

Protein sequence

MDNYNSYLPSFPVPPNQTLQFDESSFPSYYQIDNSVFEQSSMTMLPPPPPPPPVMNIPPNQAMTIGLPGESKTNAEIVCENYLKQYFSPYVTDDNVVDYSNYVDPSLINWSCEREVNYDDSAPVMKSSEFDYLNSDDIKTTQQNLLALPPSDFLSSDVVDFYSTRNWPLAAESNLPSTQLPPLPPPPKGAEAAINGEASSSKIKKKDWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKYFNRQLLPKEKRKRPSIHDINTVDPVLLMQVRARLGLPLTSSMP

Homology

[Close]

BLAST of CmUC07G140860.1 vs. NCBI nr
Match: XP_023522314.1 (transcription factor SRM1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 117.1 bits (292), Expect = 2.6e-22
Identity = 59/94 (62.77%), Postives = 70/94 (74.47%), Query Frame = 0


Query: 192 AAINGEASSSKIKKKDWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKY 251
           AA NG  S S   +  W   EH LFLVG+ IFG G WK+IAN+VV+TK+H QVASHAQK+
Sbjct: 44  AANNGRVSQSSKTRIIWTIDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHIQVASHAQKF 103

Query: 252 FNRQLLPKEKRKRPSIHDINTVDPVLLMQVRARL 286
             RQ +PKE+RKR SIHDI+TVDP LL +V ARL
Sbjct: 104 STRQQIPKEQRKRKSIHDIDTVDPELLSEVYARL 137

[Close]

BLAST of CmUC07G140860.1 vs. NCBI nr
Match: TYK16992.1 (myb-like protein J [Cucumis melo var. makuwa])

HSP 1 Score: 100.1 bits (248), Expect = 3.3e-17
Identity = 57/110 (51.82%), Postives = 71/110 (64.55%), Query Frame = 0


Query: 177 STQLPPLPPPPKGAEAAINGEASSSKIKKKDWCDSEHGLFLVGLDIFGKGGWKNIANEVV 236
           +T L  LPP P  +  ++N    ++KI+   W   EH LFL G+ + GK  WK IA+ VV
Sbjct: 12  TTNLSSLPPRPPSSHNSLN--IKNNKIRNY-WSLKEHRLFLAGMQLLGKAEWKKIADHVV 71

Query: 237 ITKSHKQVASHAQKYF-NRQLLPKEKRKRPSIHDINTVDPVLLMQVRARL 286
           ITK+HKQVASHAQKYF +   L K KRKR SIHDI TV+P  L +V A L
Sbjct: 72  ITKTHKQVASHAQKYFLHLDKLSKHKRKRSSIHDITTVEPEFLAEVEACL 118

[Close]

BLAST of CmUC07G140860.1 vs. NCBI nr
Match: KAA0044592.1 (myb-like protein J [Cucumis melo var. makuwa])

HSP 1 Score: 99.8 bits (247), Expect = 4.3e-17
Identity = 64/157 (40.76%), Postives = 87/157 (55.41%), Query Frame = 0


Query: 132 YLNSDDIKTTQQNLLALPPSDF--LSSDVVDFYSTRNWPLAAESNLPSTQLPPLPPPPKG 191
           + +   I TT  N      +++  L SD+V     +  P     +  +T L  LPP P  
Sbjct: 181 FYSPSSISTTHNNDQFADSTEYTGLLSDIV-----KMRPRVPTMSSSTTNLSSLPPRPPS 240

Query: 192 AEAAINGEASSSKIKKKDWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQ 251
           +  ++N + ++    +  W   EH LFL G+ + GK  WK IA+ VVITK+HKQVASHAQ
Sbjct: 241 SHNSLNIKNNNI---RNYWSLKEHRLFLAGMQLLGKAEWKKIADHVVITKTHKQVASHAQ 300

Query: 252 KYF-NRQLLPKEKRKRPSIHDINTVDPVLLMQVRARL 286
           KYF +   L K KRKR SIHDI TV+P  L +V A L
Sbjct: 301 KYFLHLDKLSKHKRKRSSIHDITTVEPEFLAEVEACL 329

[Close]

BLAST of CmUC07G140860.1 vs. NCBI nr
Match: XP_008454484.1 (PREDICTED: myb-like protein J [Cucumis melo])

HSP 1 Score: 99.8 bits (247), Expect = 4.3e-17
Identity = 64/157 (40.76%), Postives = 87/157 (55.41%), Query Frame = 0


Query: 132 YLNSDDIKTTQQNLLALPPSDF--LSSDVVDFYSTRNWPLAAESNLPSTQLPPLPPPPKG 191
           + +   I TT  N      +++  L SD+V     +  P     +  +T L  LPP P  
Sbjct: 142 FYSPSSISTTHNNDQFADSTEYTGLLSDIV-----KMRPRVPTMSSSTTNLSSLPPRPPS 201

Query: 192 AEAAINGEASSSKIKKKDWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQ 251
           +  ++N + ++    +  W   EH LFL G+ + GK  WK IA+ VVITK+HKQVASHAQ
Sbjct: 202 SHNSLNIKNNNI---RNYWSLKEHRLFLAGMQLLGKAEWKKIADHVVITKTHKQVASHAQ 261

Query: 252 KYF-NRQLLPKEKRKRPSIHDINTVDPVLLMQVRARL 286
           KYF +   L K KRKR SIHDI TV+P  L +V A L
Sbjct: 262 KYFLHLDKLSKHKRKRSSIHDITTVEPEFLAEVEACL 290

[Close]

BLAST of CmUC07G140860.1 vs. NCBI nr
Match: XP_011654326.2 (myb-like protein J [Cucumis sativus] >KAE8649106.1 hypothetical protein Csa_015417 [Cucumis sativus])

HSP 1 Score: 97.1 bits (240), Expect = 2.8e-16
Identity = 53/117 (45.30%), Postives = 67/117 (57.26%), Query Frame = 0


Query: 169 LAAESNLPSTQLPPLPPPPKGAEAAINGEASSSKIKKKDWCDSEHGLFLVGLDIFGKGGW 228
           L+  + LPS+ LPP P         ++  +   +    +W   EH LFL G+ + G+G W
Sbjct: 239 LSTTNLLPSSSLPPQP--------LLSQNSLKIRNNSTNWSIREHKLFLAGMQLLGQGAW 298

Query: 229 KNIANEVVITKSHKQVASHAQKYFNRQLLPKEKRKRPSIHDINTVDPVLLMQVRARL 286
           K IAN VVITK+H QVASHAQKYF RQ  P  K KR SIHDI T +P       AR+
Sbjct: 299 KKIANYVVITKTHTQVASHAQKYFLRQTSP--KHKRTSIHDITTAEPEFFALAEARI 345

[Close]

BLAST of CmUC07G140860.1 vs. ExPASy Swiss-Prot
Match: Q8S9H7 (Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.4e-15
Identity = 43/87 (49.43%), Postives = 57/87 (65.52%), Query Frame = 0


Query: 189 GAEAAINGEASSSKIKK-KDWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASH 248
           G   + +G  S  + KK   W + EH LFL+GL  +GKG W+NI+   VIT++  QVASH
Sbjct: 114 GGRKSSSGRPSEQERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASH 173

Query: 249 AQKYFNRQLLPKEKRKRPSIHDINTVD 275
           AQKYF RQL   + ++R SIHDI TV+
Sbjct: 174 AQKYFIRQLSGGKDKRRASIHDITTVN 200

[Close]

BLAST of CmUC07G140860.1 vs. ExPASy Swiss-Prot
Match: B8A9B2 (Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 7.1e-15
Identity = 48/108 (44.44%), Postives = 64/108 (59.26%), Query Frame = 0


Query: 188 KGAEAAINGEASSSKIKKK-----DWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHK 247
           KG     +G  S SK +++      W + EH LFL+GLD FGKG W++I+   VI+++  
Sbjct: 119 KGGGGGYDGGKSCSKAEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPT 178

Query: 248 QVASHAQKYFNRQLLPKEKRKRPSIHDINTVDPVLLMQVRARLGLPLT 291
           QVASHAQKYF R       R+R SIHDI +V      QV A+ G P+T
Sbjct: 179 QVASHAQKYFIRLNSMNRDRRRSSIHDITSV--TAGDQVAAQQGAPIT 224

[Close]

BLAST of CmUC07G140860.1 vs. ExPASy Swiss-Prot
Match: Q8LH59 (Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 7.1e-15
Identity = 48/108 (44.44%), Postives = 64/108 (59.26%), Query Frame = 0


Query: 188 KGAEAAINGEASSSKIKKK-----DWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHK 247
           KG     +G  S SK +++      W + EH LFL+GLD FGKG W++I+   VI+++  
Sbjct: 119 KGGGGGYDGGKSCSKAEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPT 178

Query: 248 QVASHAQKYFNRQLLPKEKRKRPSIHDINTVDPVLLMQVRARLGLPLT 291
           QVASHAQKYF R       R+R SIHDI +V      QV A+ G P+T
Sbjct: 179 QVASHAQKYFIRLNSMNRDRRRSSIHDITSV--TAGDQVAAQQGAPIT 224

[Close]

BLAST of CmUC07G140860.1 vs. ExPASy Swiss-Prot
Match: Q9FNN6 (Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.3e-13
Identity = 38/80 (47.50%), Postives = 55/80 (68.75%), Query Frame = 0


Query: 196 GEASSSKIKKKD--WCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKYFN 255
           G++ S + ++K   W + EH LFL+GLD +GKG W++I+   V+T++  QVASHAQKYF 
Sbjct: 106 GKSKSDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFI 165

Query: 256 RQLLPKEKRKRPSIHDINTV 274
           R     + R+R SIHDI +V
Sbjct: 166 RLNSMNKDRRRSSIHDITSV 185

[Close]

BLAST of CmUC07G140860.1 vs. ExPASy Swiss-Prot
Match: Q9FKF9 (Probable transcription factor At5g61620 OS=Arabidopsis thaliana OX=3702 GN=At5g61620 PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 7.3e-12
Identity = 35/79 (44.30%), Postives = 50/79 (63.29%), Query Frame = 0


Query: 196 GEASSSKIKKKDWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKYFNRQ 255
           G+ +  K K K W + EH  FL+GL+  GKG W+ IA   V T++  QVASHAQKYF R 
Sbjct: 98  GKTAHEKKKGKPWTEEEHRNFLIGLNKLGKGDWRGIAKSFVSTRTPTQVASHAQKYFIRL 157

Query: 256 LLPKEKRKRPSIHDINTVD 275
            +  ++++R S+ DI+  D
Sbjct: 158 NVNDKRKRRASLFDISLED 176

[Close]

BLAST of CmUC07G140860.1 vs. ExPASy TrEMBL
Match: A0A5D3CZL0 (Myb-like protein J OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001340 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.6e-17
Identity = 57/110 (51.82%), Postives = 71/110 (64.55%), Query Frame = 0


Query: 177 STQLPPLPPPPKGAEAAINGEASSSKIKKKDWCDSEHGLFLVGLDIFGKGGWKNIANEVV 236
           +T L  LPP P  +  ++N    ++KI+   W   EH LFL G+ + GK  WK IA+ VV
Sbjct: 12  TTNLSSLPPRPPSSHNSLN--IKNNKIRNY-WSLKEHRLFLAGMQLLGKAEWKKIADHVV 71

Query: 237 ITKSHKQVASHAQKYF-NRQLLPKEKRKRPSIHDINTVDPVLLMQVRARL 286
           ITK+HKQVASHAQKYF +   L K KRKR SIHDI TV+P  L +V A L
Sbjct: 72  ITKTHKQVASHAQKYFLHLDKLSKHKRKRSSIHDITTVEPEFLAEVEACL 118

[Close]

BLAST of CmUC07G140860.1 vs. ExPASy TrEMBL
Match: A0A5A7TMR3 (Myb-like protein J OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003420 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 2.1e-17
Identity = 64/157 (40.76%), Postives = 87/157 (55.41%), Query Frame = 0


Query: 132 YLNSDDIKTTQQNLLALPPSDF--LSSDVVDFYSTRNWPLAAESNLPSTQLPPLPPPPKG 191
           + +   I TT  N      +++  L SD+V     +  P     +  +T L  LPP P  
Sbjct: 181 FYSPSSISTTHNNDQFADSTEYTGLLSDIV-----KMRPRVPTMSSSTTNLSSLPPRPPS 240

Query: 192 AEAAINGEASSSKIKKKDWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQ 251
           +  ++N + ++    +  W   EH LFL G+ + GK  WK IA+ VVITK+HKQVASHAQ
Sbjct: 241 SHNSLNIKNNNI---RNYWSLKEHRLFLAGMQLLGKAEWKKIADHVVITKTHKQVASHAQ 300

Query: 252 KYF-NRQLLPKEKRKRPSIHDINTVDPVLLMQVRARL 286
           KYF +   L K KRKR SIHDI TV+P  L +V A L
Sbjct: 301 KYFLHLDKLSKHKRKRSSIHDITTVEPEFLAEVEACL 329

[Close]

BLAST of CmUC07G140860.1 vs. ExPASy TrEMBL
Match: A0A1S3BZH7 (myb-like protein J OS=Cucumis melo OX=3656 GN=LOC103494880 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 2.1e-17
Identity = 64/157 (40.76%), Postives = 87/157 (55.41%), Query Frame = 0


Query: 132 YLNSDDIKTTQQNLLALPPSDF--LSSDVVDFYSTRNWPLAAESNLPSTQLPPLPPPPKG 191
           + +   I TT  N      +++  L SD+V     +  P     +  +T L  LPP P  
Sbjct: 142 FYSPSSISTTHNNDQFADSTEYTGLLSDIV-----KMRPRVPTMSSSTTNLSSLPPRPPS 201

Query: 192 AEAAINGEASSSKIKKKDWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQ 251
           +  ++N + ++    +  W   EH LFL G+ + GK  WK IA+ VVITK+HKQVASHAQ
Sbjct: 202 SHNSLNIKNNNI---RNYWSLKEHRLFLAGMQLLGKAEWKKIADHVVITKTHKQVASHAQ 261

Query: 252 KYF-NRQLLPKEKRKRPSIHDINTVDPVLLMQVRARL 286
           KYF +   L K KRKR SIHDI TV+P  L +V A L
Sbjct: 262 KYFLHLDKLSKHKRKRSSIHDITTVEPEFLAEVEACL 290

[Close]

BLAST of CmUC07G140860.1 vs. ExPASy TrEMBL
Match: A0A0A0KYZ4 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G014580 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.3e-16
Identity = 53/117 (45.30%), Postives = 67/117 (57.26%), Query Frame = 0


Query: 169 LAAESNLPSTQLPPLPPPPKGAEAAINGEASSSKIKKKDWCDSEHGLFLVGLDIFGKGGW 228
           L+  + LPS+ LPP P         ++  +   +    +W   EH LFL G+ + G+G W
Sbjct: 239 LSTTNLLPSSSLPPQP--------LLSQNSLKIRNNSTNWSIREHKLFLAGMQLLGQGAW 298

Query: 229 KNIANEVVITKSHKQVASHAQKYFNRQLLPKEKRKRPSIHDINTVDPVLLMQVRARL 286
           K IAN VVITK+H QVASHAQKYF RQ  P  K KR SIHDI T +P       AR+
Sbjct: 299 KKIANYVVITKTHTQVASHAQKYFLRQTSP--KHKRTSIHDITTAEPEFFALAEARI 345

[Close]

BLAST of CmUC07G140860.1 vs. ExPASy TrEMBL
Match: A0A6J1CV56 (transcription factor SRM1-like OS=Momordica charantia OX=3673 GN=LOC111014658 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 5.1e-16
Identity = 62/163 (38.04%), Postives = 87/163 (53.37%), Query Frame = 0


Query: 125 MKSSEFDYLNSDDIKTTQQNLLALPPSD--FLSSDVVDFY------STRNWPL-----AA 184
           M++SEF Y +SD   +        P ++   + +D++  Y      S+  W L     A 
Sbjct: 1   MQNSEFFYSDSDFYSSGHFPAGRTPTNENHCIGNDIMSDYLTYSPLSSIQWELEDGSSAL 60

Query: 185 ESNLPSTQLPPLPPPPKGAEAAINGEASSSKIKKKDWCDSEHGLFLVGLDIFGKGGWKNI 244
           +   P + L P P P K             K K   W   EH LFL+GL I+GKG WK+I
Sbjct: 61  DPTTPVSDLGPSPSPEK-------------KRKVTCWTKDEHKLFLIGLQIYGKGHWKSI 120

Query: 245 ANEVVITKSHKQVASHAQKYFNRQLLPKEKRKRPSIHDINTVD 275
           A EV +TK+  QVASHAQK+++R+L  ++ RKR SI+DI TVD
Sbjct: 121 ATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVD 150

[Close]

BLAST of CmUC07G140860.1 vs. TAIR 10
Match: AT5G04760.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 90.5 bits (223), Expect = 2.4e-18
Identity = 43/80 (53.75%), Postives = 57/80 (71.25%), Query Frame = 0


Query: 200 SSKIKKKDWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKYFNRQLLPK 259
           S + +   W ++EH LFL+GL  +GKG W++I+  VV+T++  QVASHAQKYF RQ   K
Sbjct: 93  SERKRGTPWTENEHKLFLIGLKRYGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQNSVK 152

Query: 260 EKRKRPSIHDINTVDPVLLM 280
           ++RKR SIHDI TVD  L M
Sbjct: 153 KERKRSSIHDITTVDATLAM 172

[Close]

BLAST of CmUC07G140860.1 vs. TAIR 10
Match: AT5G58900.1 (Homeodomain-like transcriptional regulator )

HSP 1 Score: 81.6 bits (200), Expect = 1.1e-15
Identity = 38/67 (56.72%), Postives = 49/67 (73.13%), Query Frame = 0


Query: 208 WCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKYFNRQLLPKEKRKRPSI 267
           W + EH LFL+GL  +GKG W+NI+   VIT++  QVASHAQKYF RQL   + ++R SI
Sbjct: 143 WTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASI 202

Query: 268 HDINTVD 275
           HDI TV+
Sbjct: 203 HDITTVN 209

[Close]

BLAST of CmUC07G140860.1 vs. TAIR 10
Match: AT1G49010.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 80.9 bits (198), Expect = 1.9e-15
Identity = 51/145 (35.17%), Postives = 71/145 (48.97%), Query Frame = 0


Query: 136 DDIKTTQQNLLALPPSDFLSSDVVDFYSTRNWPLAAESNLPSTQLPPLPPPPKGAEAAIN 195
           +D+K  +   + LP        +VD  +      A   +  S      P P     ++ N
Sbjct: 58  EDVKAIENGQVPLPRYHHRKGLIVDEAAAAATSPANRDSHSSGSSEKKPNPGTSGISSSN 117

Query: 196 G------EASSSKIKKKDWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQ 255
           G       A   + K   W + EH LFL+GLD FGKG W++I+   VI+++  QVASHAQ
Sbjct: 118 GGRSGGSRAEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQ 177

Query: 256 KYFNRQLLPKEKRKRPSIHDINTVD 275
           KYF R       R+R SIHDI TV+
Sbjct: 178 KYFIRLNSMNRDRRRSSIHDITTVN 202

[Close]

BLAST of CmUC07G140860.1 vs. TAIR 10
Match: AT3G11280.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 80.9 bits (198), Expect = 1.9e-15
Identity = 39/80 (48.75%), Postives = 54/80 (67.50%), Query Frame = 0


Query: 195 NGEASSSKIKKK--DWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKYF 254
           +G   S + +KK   W + EH  FL+GL  +GKG W+NI+   V++K+  QVASHAQKY+
Sbjct: 114 SGARGSDQDRKKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVVSKTPTQVASHAQKYY 173

Query: 255 NRQLLPKEKRKRPSIHDINT 273
            RQL   + ++RPSIHDI T
Sbjct: 174 QRQLSGAKDKRRPSIHDITT 193

[Close]

BLAST of CmUC07G140860.1 vs. TAIR 10
Match: AT3G11280.2 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 80.9 bits (198), Expect = 1.9e-15
Identity = 39/80 (48.75%), Postives = 54/80 (67.50%), Query Frame = 0


Query: 195 NGEASSSKIKKK--DWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKYF 254
           +G   S + +KK   W + EH  FL+GL  +GKG W+NI+   V++K+  QVASHAQKY+
Sbjct: 114 SGARGSDQDRKKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVVSKTPTQVASHAQKYY 173

Query: 255 NRQLLPKEKRKRPSIHDINT 273
            RQL   + ++RPSIHDI T
Sbjct: 174 QRQLSGAKDKRRPSIHDITT 193

The following BLAST results are available for this feature:

BLAST of CmUC07G140860.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023522314.1	2.6e-22	62.77	transcription factor SRM1-like [Cucurbita pepo subsp. pepo]	[more]
TYK16992.1	3.3e-17	51.82	myb-like protein J [Cucumis melo var. makuwa]	[more]
KAA0044592.1	4.3e-17	40.76	myb-like protein J [Cucumis melo var. makuwa]	[more]
XP_008454484.1	4.3e-17	40.76	PREDICTED: myb-like protein J [Cucumis melo]	[more]
XP_011654326.2	2.8e-16	45.30	myb-like protein J [Cucumis sativus] >KAE8649106.1 hypothetical protein Csa_0154...	[more]

BLAST of CmUC07G140860.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S9H7	2.4e-15	49.43	Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 ...	[more]
B8A9B2	7.1e-15	44.44	Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 ...	[more]
Q8LH59	7.1e-15	44.44	Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=...	[more]
Q9FNN6	1.3e-13	47.50	Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1	[more]
Q9FKF9	7.3e-12	44.30	Probable transcription factor At5g61620 OS=Arabidopsis thaliana OX=3702 GN=At5g6...	[more]

BLAST of CmUC07G140860.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CZL0	1.6e-17	51.82	Myb-like protein J OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G0...	[more]
A0A5A7TMR3	2.1e-17	40.76	Myb-like protein J OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00...	[more]
A0A1S3BZH7	2.1e-17	40.76	myb-like protein J OS=Cucumis melo OX=3656 GN=LOC103494880 PE=4 SV=1	[more]
A0A0A0KYZ4	1.3e-16	45.30	HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G01458...	[more]
A0A6J1CV56	5.1e-16	38.04	transcription factor SRM1-like OS=Momordica charantia OX=3673 GN=LOC111014658 PE...	[more]

BLAST of CmUC07G140860.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04760.1	2.4e-18	53.75	Duplicated homeodomain-like superfamily protein	[more]
AT5G58900.1	1.1e-15	56.72	Homeodomain-like transcriptional regulator	[more]
AT1G49010.1	1.9e-15	35.17	Duplicated homeodomain-like superfamily protein	[more]
AT3G11280.1	1.9e-15	48.75	Duplicated homeodomain-like superfamily protein	[more]
AT3G11280.2	1.9e-15	48.75	Duplicated homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 204..254 e-value: 0.0075 score: 25.5
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 205..255 e-value: 1.6E-11 score: 42.3
None	No IPR available	GENE3D	1.10.10.60		coord: 206..256 e-value: 5.7E-11 score: 44.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..193
None	No IPR available	PANTHER	PTHR44191	TRANSCRIPTION FACTOR KUA1	coord: 194..275
None	No IPR available	PANTHER	PTHR44191:SF21	TRANSCRIPTION FACTOR SRM1	coord: 194..275
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 200..256 score: 13.157018
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 206..254

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmUC07G140860	CmUC07G140860	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC07G140860.1-exon	CmUC07G140860.1-exon-CmU531Chr07:30111516..30111759	exon
CmUC07G140860.1-exon	CmUC07G140860.1-exon-CmU531Chr07:30112756..30113767	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC07G140860.1-cds	CmUC07G140860.1-cds-CmU531Chr07:30111516..30111759	CDS
CmUC07G140860.1-cds	CmUC07G140860.1-cds-CmU531Chr07:30112756..30113396	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC07G140860.1-five_prime_utr	CmUC07G140860.1-five_prime_utr-CmU531Chr07:30113397..30113767	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmUC07G140860.1	CmUC07G140860.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding