CmUC06G123440.1 (mRNA) Watermelon (USVL531) v1

Overview


Name	CmUC06G123440.1
Type	mRNA
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	nuclear factor Y, subunit B13
Location	CmU531Chr06: 26958752 .. 26962201 (-)
Sequence length	779
RNA-Seq Expression	CmUC06G123440.1
Synteny	CmUC06G123440.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATATATCAACAATGCCCTTCCTCCACCACACCACCACCTCGATCGCCTCCTTCGATTCCGATCTTCTTCAACCGGTGGGATCGCCGTCGTCATTTTCCGGTTTCGCGTATTCGTTTTTTCCGTTGGCTTCTGGGACACCGTAAGTTCCGATCTCCTTCCCTTTTCCCTCTATCGTTTGTTTTAATTTTTTCCAGAATTTGTTTATATTTTTTTTTCCGCCGTTGGGGTTCTTTTTTTCCCCTGATTTTATTTATTTATTTTTTGCGTGTTGTATGTATTGCAGTCTCGAACCGGTTCGATATGGAGCCGATGGACATAGTTGGAAAGTCTAAAGAGGACGCCTCGCTTCCAAAGGGTATTTGTAATTTCGCGGTGGTTTTTGGTGTTTTTGCGTGATTTTTTGGGGGTTTTTTCCCCTATGGTGTAGTGAATTTGATGTGTTGATTCATGGAGTAATTTGGTGTTTCTTTTACTTGGAACAATAATTTTAATTTTGGGTTTTTTAATTTTTAATTTTTATTATTATTATTATATTTTTTTGTAATTTTTGGAGAGGAAGTATCGAATTGAGGGTTGAAGTTGATGTCTGGAAAATCTATATTTTGTGACTTGAGCGACTAGTGGAACCTTTAATTATCGTTTCCGCTGGAGAAAATGCACTTTGGTGCTTATTTCTTGTTTCATGGATTTTGTTTGCTCGGTACGGCTGCATGGCGCGGCAATTTTTGGTGGGAACTTGAAAGTAGATGATTGTCACGAGGAGTTCATGGAAGGGCTTTGCTTGTTTTTCTTTTCAGTATTTTTCTGTGGGGTTAAGCGAGTGACTAGTTTGCTGTATGCCATAACTAAATCTGGACGCCTGAGTATCAGTTCATCAGTCCTTACTGTAATGTGTTCACGTTTTGCAAAAATATAGATTTATTCTTTATCATTCATGTTTTTGCTTGCATCCCACTTCTGCTATACACGAATTGCCAGTCACCCAGTTCCAGAACTCATTTTAAGTATTCTATAAAGATGGTAGAGGTTCCAAAAACAGTCGGTGTTTCTTTTGTAAGTATTCTATAAAGATGGTAGAGGTTCCAAAAGCTTTGTTTTGTTGTTCTTGTTCAGCTTTTAAGCTAGATGTCTTTCATAAGAAACAGTAGCTTTTGTGGATATTTATGTTCCTAAGTGTTAGTGTTCCTCTTCTCCCGTGTCTTTTTTCTTTCAGTTTCATTAGCTTACATGAATTGGTTCAAACTTTGATATGAAAAGACAATGGCGGCCTTCCTTGTACAAACAAAGTAATTGAAGACCATTGAATTGCTTGAGCAACTGCTGAAGTTTGTTTTGTTTCTTTTGAATGTGGGGGATTCAAATCTCTAATCTTTGTGAGAGGTGTTATGATACCTTCGCCCATTGAGCTATACTTAGGGTAGCAAGTGTTTTTGTTTTGTAAACCATAATTTCAATTTCCCTGGTAGTTTGTTTTAGTTATTCAATTTATTTTTTTGTTGAATTTTTCTTTTTCAGCGACTATGACCAAAATTATCAAAGAGATGTTACCCCCTGATGTACGGGTTGCAAGAGATGCCCAAGATCTTCTGATTGAGTGTTGTGTAGGTGAGGATATTTTGCTTTGCCATTTTCTTTGTATATTTTAACATTTTAGGTGTTAGTACTATGTGTTGGTTTCCTGTACTACTGTTAGATGGCCGTTTGTGGTTCTATTATTTTTCCAACAATAAGGGTCAGTAGTTGTCTTCAGACATTGCTTTTTGTTGTACTATTTTATTGTTTAGTTGATTTTTCTGCACTCCAACGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCAAAACCCACCTTAAGGTGGCGGCAGGTTTTTATGACTGACCAATTATCACTTCTTTCTCAAGAATTCACTCTCTTTATTTTGGTGTTCTTGCAGAGTTTATAAACCTTGTATCATCCGAGTCTAATGAAGTTTGTAGCAAAGAAGAAAAAAGAACAATTGCACCTGAACACGTGCTCAAGGCTCTTGAGGTCTATGGACTATCCAAGTTTCCTTTACATTCTTAATAATATAGACTTTTATGTGTTACTTTTTATTAAGCTTTAGGATAATACATGCTAGCATTGTCTTGTTTACCATCCAGCTCCATGGATTCGAAGTTTCCATTCCGTAGAAGTTTATTTCAGTATTACATGATACAGCTGTACAGCTAAAGTACCAAATCATTAAGTAAATGAATGTTATTCAGGGGAATAAAAATTTCAATGCCTCAATTATACCTCACCAATATGTTCCTTGTCAGATGCGCTGCTCATACCATTCTAATTGAATCATTTTAATCCTTTGCTTTACTTTTTATTTTATGAGAAACTGGGCTTCCATTAAGAGAAATAATAGAAAGTTCTTTTTCACTTCAAGCACTGCTCATATCGTTCTATCTAAATCTATAAACAGCACATAATTTATTTTAAATCTACTCTGTCTTCTTATATAGTTGACCTCAGCTTGAGTCAAGGATTAACCAGCTCTGACATAAAATCTTAGTTTCCTCCTATTTCACAGTAATGGAGGAGAGATAAATCTCAATATATGTTAACAATGTCATGTGGAGTTTGATTTCATATAAGAACTAATGGTGAAATCTCAATACATGTTAACAATGTCATGTTGAGTTTGATAACCTCCATTGTGTTTGAAGAAGAGTGATTTGCAGCTTTGCAGCTTTTGCTTGGTTACTTTACATTATGTCTGCTTTTGGGCTTACACGTATGTTTATATATATGATCAGGTGCTTGGTTTTAGTGAATACATTGAGGAAGTTTATGCTGCATATGAACAACACAGGCTCGAAACTATGGTAATACTTCAGTATATTTACTATTGTACCTGTTCAACGAATTAATTGAAGTGATTGATCATTTAGAAATTTGCTTTGGTCTCGATAATCAGTATCTATTTTATCTTGTTCCTTGAAGAAGATTATTTTCCTTCATTCTCAAATTAGGTCATAAATTGTAGTTCTGACTACTCAAACATGAGTGTCTCAAGACATCTAGAAGCACTAACATTTTTCTTTTCTCTCTGTCGAGAAACTTCTGCAGCAGGACTCATTGAAAGGTGGGAAGTGGAGTAATGGAGCTGAGATGACCGAAGAAGAAGCTTTGGCTGAGCAGCAAAGAATGTTTGCTGAGGCACGTGCAAGAATGAATGGCAGTAACACTGCACCGAAGCAACCGGAGCCTGAGCAAAGTTTAGAGAGCTAATTTTAGGATCTTTATTTTCTTCAACCATAGGCAAGATTCCTTGACCCTTCCATTTGTGCCTCAAATATGCCTCGTGCATATGTACAAAAAAGAAATGATTAACCTAGCTACTGGGCTCTGTGAAGATGCATTGTAATATATATCCATATTTGCGGATCCATGTTTAGTTAATACAAGTAGTGACTGTG

mRNA sequence

ATGCATATATCAACAATGCCCTTCCTCCACCACACCACCACCTCGATCGCCTCCTTCGATTCCGATCTTCTTCAACCGGTGGGATCGCCGTCGTCATTTTCCGTCTCGAACCGGTTCGATATGGAGCCGATGGACATAGTTGGAAAGTCTAAAGAGGACGCCTCGCTTCCAAAGGCGACTATGACCAAAATTATCAAAGAGATGTTACCCCCTGATGTACGGGTTGCAAGAGATGCCCAAGATCTTCTGATTGAGTGTTGTGTAGAGTTTATAAACCTTGTATCATCCGAGTCTAATGAAGTTTGTAGCAAAGAAGAAAAAAGAACAATTGCACCTGAACACGTGCTCAAGGCTCTTGAGGTGCTTGGTTTTAGTGAATACATTGAGGAAGTTTATGCTGCATATGAACAACACAGGCTCGAAACTATGCAGGACTCATTGAAAGGTGGGAAGTGGAGTAATGGAGCTGAGATGACCGAAGAAGAAGCTTTGGCTGAGCAGCAAAGAATGTTTGCTGAGGCACGTGCAAGAATGAATGGCAGTAACACTGCACCGAAGCAACCGGAGCCTGAGCAAAGTTTAGAGAGCTAATTTTAGGATCTTTATTTTCTTCAACCATAGGCAAGATTCCTTGACCCTTCCATTTGTGCCTCAAATATGCCTCGTGCATATGTACAAAAAAGAAATGATTAACCTAGCTACTGGGCTCTGTGAAGATGCATTGTAATATATATCCATATTTGCGGATCCATGTTTAGTTAATACAAGTAGTGACTGTG

Coding sequence (CDS)

ATGCATATATCAACAATGCCCTTCCTCCACCACACCACCACCTCGATCGCCTCCTTCGATTCCGATCTTCTTCAACCGGTGGGATCGCCGTCGTCATTTTCCGTCTCGAACCGGTTCGATATGGAGCCGATGGACATAGTTGGAAAGTCTAAAGAGGACGCCTCGCTTCCAAAGGCGACTATGACCAAAATTATCAAAGAGATGTTACCCCCTGATGTACGGGTTGCAAGAGATGCCCAAGATCTTCTGATTGAGTGTTGTGTAGAGTTTATAAACCTTGTATCATCCGAGTCTAATGAAGTTTGTAGCAAAGAAGAAAAAAGAACAATTGCACCTGAACACGTGCTCAAGGCTCTTGAGGTGCTTGGTTTTAGTGAATACATTGAGGAAGTTTATGCTGCATATGAACAACACAGGCTCGAAACTATGCAGGACTCATTGAAAGGTGGGAAGTGGAGTAATGGAGCTGAGATGACCGAAGAAGAAGCTTTGGCTGAGCAGCAAAGAATGTTTGCTGAGGCACGTGCAAGAATGAATGGCAGTAACACTGCACCGAAGCAACCGGAGCCTGAGCAAAGTTTAGAGAGCTAA

Protein sequence

MHISTMPFLHHTTTSIASFDSDLLQPVGSPSSFSVSNRFDMEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMQDSLKGGKWSNGAEMTEEEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES

Homology

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BLAST of CmUC06G123440.1 vs. NCBI nr
Match: KAG6589570.1 (Protein Dr1-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 306.2 bits (783), Expect = 2.0e-79
Identity = 159/161 (98.76%), Postives = 159/161 (98.76%), Query Frame = 0


Query: 36  SNRFDMEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVS 95
           S RFDMEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVS
Sbjct: 36  SQRFDMEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVS 95

Query: 96  SESNEVCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMQDSLKGGKWSNG 155
           SESNEVCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHR ETMQDSLKGGKWSNG
Sbjct: 96  SESNEVCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRHETMQDSLKGGKWSNG 155

Query: 156 AEMTEEEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 197
           AEMTEEEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES
Sbjct: 156 AEMTEEEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 196

[Close]

BLAST of CmUC06G123440.1 vs. NCBI nr
Match: KAG7023258.1 (Protein Dr1-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 304.3 bits (778), Expect = 7.6e-79
Identity = 158/161 (98.14%), Postives = 159/161 (98.76%), Query Frame = 0


Query: 36  SNRFDMEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVS 95
           S RF+MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVS
Sbjct: 4   SQRFNMEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVS 63

Query: 96  SESNEVCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMQDSLKGGKWSNG 155
           SESNEVCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHR ETMQDSLKGGKWSNG
Sbjct: 64  SESNEVCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRHETMQDSLKGGKWSNG 123

Query: 156 AEMTEEEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 197
           AEMTEEEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES
Sbjct: 124 AEMTEEEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 164

[Close]

BLAST of CmUC06G123440.1 vs. NCBI nr
Match: XP_038879127.1 (protein Dr1 homolog isoform X2 [Benincasa hispida])

HSP 1 Score: 301.2 bits (770), Expect = 6.5e-78
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 41  MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 100
           MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
Sbjct: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60

Query: 101 VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMQDSLKGGKWSNGAEMTE 160
           VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMQDSLKGGKWSNGAEMTE
Sbjct: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMQDSLKGGKWSNGAEMTE 120

Query: 161 EEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 197
           EEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES
Sbjct: 121 EEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 156

[Close]

BLAST of CmUC06G123440.1 vs. NCBI nr
Match: XP_008453352.1 (PREDICTED: protein Dr1 homolog [Cucumis melo])

HSP 1 Score: 300.4 bits (768), Expect = 1.1e-77
Identity = 155/156 (99.36%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 41  MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 100
           MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
Sbjct: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60

Query: 101 VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMQDSLKGGKWSNGAEMTE 160
           VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHR+ETMQDSLKGGKWSNGAEMTE
Sbjct: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRIETMQDSLKGGKWSNGAEMTE 120

Query: 161 EEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 197
           EEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES
Sbjct: 121 EEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 156

[Close]

BLAST of CmUC06G123440.1 vs. NCBI nr
Match: XP_022134979.1 (protein Dr1 homolog isoform X2 [Momordica charantia])

HSP 1 Score: 300.1 bits (767), Expect = 1.4e-77
Identity = 155/156 (99.36%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 41  MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 100
           MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
Sbjct: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60

Query: 101 VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMQDSLKGGKWSNGAEMTE 160
           VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMQDSLKGGKWSNGAEMTE
Sbjct: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMQDSLKGGKWSNGAEMTE 120

Query: 161 EEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 197
           EEALAEQQRMFAEARARMNG+NTAPKQPEPEQSLES
Sbjct: 121 EEALAEQQRMFAEARARMNGNNTAPKQPEPEQSLES 156

[Close]

BLAST of CmUC06G123440.1 vs. ExPASy Swiss-Prot
Match: P49592 (Protein Dr1 homolog OS=Arabidopsis thaliana OX=3702 GN=DR1 PE=1 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 8.5e-65
Identity = 127/156 (81.41%), Postives = 139/156 (89.10%), Query Frame = 0


Query: 41  MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 100
           M+PMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESN+
Sbjct: 1   MDPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESND 60

Query: 101 VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMQDSLKGGKWSNGAEMTE 160
           VC+KE+KRTIAPEHVLKAL+VLGF EYIEEVYAAYEQH+ ETMQD+ +  KW+ GA+MTE
Sbjct: 61  VCNKEDKRTIAPEHVLKALQVLGFGEYIEEVYAAYEQHKYETMQDTQRSVKWNPGAQMTE 120

Query: 161 EEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 197
           EEA AEQQRMFAEARARMNG  + P+   PE    S
Sbjct: 121 EEAAAEQQRMFAEARARMNGGVSVPQPEHPETDQRS 156

[Close]

BLAST of CmUC06G123440.1 vs. ExPASy Swiss-Prot
Match: Q55DJ5 (Protein Dr1 homolog OS=Dictyostelium discoideum OX=44689 GN=dr1 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 6.8e-30
Identity = 67/142 (47.18%), Postives = 103/142 (72.54%), Query Frame = 0


Query: 51  KEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCSKEEKRTI 110
           +++ SLPKAT++K+IKEMLP DV+ + + +DL++ECCVEFI+L+SSE+N++C +E+KRTI
Sbjct: 8   EDNLSLPKATVSKLIKEMLPQDVKCSNETRDLILECCVEFIHLISSEANDICGREQKRTI 67

Query: 111 APEHVLKALEVLGFSEYIEEVYAAYEQHRLETMQDSLKGGKWSNGAEMTEEEALAEQQRM 170
           A EHV+KAL  LGFS+Y ++V   Y++H+LE    S    K+ N  + T E+ + EQQ +
Sbjct: 68  AAEHVIKALTELGFSDYTQKVSDVYDKHKLEVSTKSKSSKKFENLGKPT-EQLIREQQLL 127

Query: 171 FAEARARMNGSNTAPKQPEPEQ 193
           FA+AR+    S  A +  + +Q
Sbjct: 128 FAKARSAFQASPEAQQLQQLQQ 148

[Close]

BLAST of CmUC06G123440.1 vs. ExPASy Swiss-Prot
Match: O14348 (Negative cofactor 2 complex subunit beta OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ncb2 PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.0e-25
Identity = 60/137 (43.80%), Postives = 89/137 (64.96%), Query Frame = 0


Query: 48  GKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCSKEEK 107
           G + ++ SLPKAT+ K++ ++LP D+   ++A+DLLIECCVEFI+LVSSE+NE+C KE K
Sbjct: 4   GFADDELSLPKATVQKMVSDILPVDLTFTKEARDLLIECCVEFIHLVSSEANEICEKEAK 63

Query: 108 RTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMQDSLKGGKWSNGAEMTEEEALAEQ 167
           +TIA EH++KALE L F EYI E      +H+ +      K  K+     ++ +E L +Q
Sbjct: 64  KTIAAEHIIKALENLEFKEYIAEALEVAAEHKEQQKNREKKSSKFEQSG-VSRDELLRQQ 123

Query: 168 QRMFAEARARMNGSNTA 185
           + + + AR R    N A
Sbjct: 124 EELLSRARERFKNQNIA 139

[Close]

BLAST of CmUC06G123440.1 vs. ExPASy Swiss-Prot
Match: B0Y0F3 (NCT transcriptional regulatory complex subunit B OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=nctB PE=1 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.0e-25
Identity = 65/134 (48.51%), Postives = 87/134 (64.93%), Query Frame = 0


Query: 50  SKEDASLPKATMTKIIKEMLPPD--VRVARDAQDLLIECCVEFINLVSSESNEVCSKEEK 109
           S +D SLPKAT+ KII E+LPP      ++DA+DLL+ECCVEFI L+SSE+N++  KE K
Sbjct: 8   SNDDLSLPKATVQKIITEILPPSSGQTFSKDARDLLMECCVEFITLISSEANDISEKEAK 67

Query: 110 RTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMQDSLKGGKWSNGAEMTEEEALAEQ 169
           +TIA EHV +AL  LGF +YI EV A  E+H+ +      K  K      +TEEE L +Q
Sbjct: 68  KTIACEHVERALRDLGFGDYIPEVLAVAEEHKEQLKSREKKQSKMEQSG-LTEEELLRQQ 127

Query: 170 QRMFAEARARMNGS 182
           Q +F  A  + N +
Sbjct: 128 QELFRSATEKYNAA 140

[Close]

BLAST of CmUC06G123440.1 vs. ExPASy Swiss-Prot
Match: Q4WFF8 (NCT transcriptional regulatory complex subunit B OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=nctB PE=1 SV=2)

HSP 1 Score: 116.7 bits (291), Expect = 3.0e-25
Identity = 65/134 (48.51%), Postives = 87/134 (64.93%), Query Frame = 0


Query: 50  SKEDASLPKATMTKIIKEMLPPD--VRVARDAQDLLIECCVEFINLVSSESNEVCSKEEK 109
           S +D SLPKAT+ KII E+LPP      ++DA+DLL+ECCVEFI L+SSE+N++  KE K
Sbjct: 8   SNDDLSLPKATVQKIITEILPPSSGQTFSKDARDLLMECCVEFITLISSEANDISEKEAK 67

Query: 110 RTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMQDSLKGGKWSNGAEMTEEEALAEQ 169
           +TIA EHV +AL  LGF +YI EV A  E+H+ +      K  K      +TEEE L +Q
Sbjct: 68  KTIACEHVERALRDLGFGDYIPEVLAVAEEHKEQLKSREKKQSKMEQSG-LTEEELLRQQ 127

Query: 170 QRMFAEARARMNGS 182
           Q +F  A  + N +
Sbjct: 128 QELFRSATEKYNAA 140

[Close]

BLAST of CmUC06G123440.1 vs. ExPASy TrEMBL
Match: A0A1S3BW28 (protein Dr1 homolog OS=Cucumis melo OX=3656 GN=LOC103494097 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 5.3e-78
Identity = 155/156 (99.36%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 41  MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 100
           MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
Sbjct: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60

Query: 101 VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMQDSLKGGKWSNGAEMTE 160
           VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHR+ETMQDSLKGGKWSNGAEMTE
Sbjct: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRIETMQDSLKGGKWSNGAEMTE 120

Query: 161 EEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 197
           EEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES
Sbjct: 121 EEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 156

[Close]

BLAST of CmUC06G123440.1 vs. ExPASy TrEMBL
Match: A0A6J1C081 (protein Dr1 homolog isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007097 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 7.0e-78
Identity = 155/156 (99.36%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 41  MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 100
           MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
Sbjct: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60

Query: 101 VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMQDSLKGGKWSNGAEMTE 160
           VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMQDSLKGGKWSNGAEMTE
Sbjct: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMQDSLKGGKWSNGAEMTE 120

Query: 161 EEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 197
           EEALAEQQRMFAEARARMNG+NTAPKQPEPEQSLES
Sbjct: 121 EEALAEQQRMFAEARARMNGNNTAPKQPEPEQSLES 156

[Close]

BLAST of CmUC06G123440.1 vs. ExPASy TrEMBL
Match: A0A6J1JDU1 (protein Dr1 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484903 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 2.0e-77
Identity = 155/156 (99.36%), Postives = 155/156 (99.36%), Query Frame = 0


Query: 41  MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 100
           MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
Sbjct: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60

Query: 101 VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMQDSLKGGKWSNGAEMTE 160
           VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHR ETMQDSLKGGKWSNGAEMTE
Sbjct: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRHETMQDSLKGGKWSNGAEMTE 120

Query: 161 EEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 197
           EEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES
Sbjct: 121 EEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 156

[Close]

BLAST of CmUC06G123440.1 vs. ExPASy TrEMBL
Match: A0A6J1E1R3 (protein Dr1 homolog isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430003 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 2.0e-77
Identity = 155/156 (99.36%), Postives = 155/156 (99.36%), Query Frame = 0


Query: 41  MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 100
           MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
Sbjct: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60

Query: 101 VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMQDSLKGGKWSNGAEMTE 160
           VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHR ETMQDSLKGGKWSNGAEMTE
Sbjct: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRHETMQDSLKGGKWSNGAEMTE 120

Query: 161 EEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 197
           EEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES
Sbjct: 121 EEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 156

[Close]

BLAST of CmUC06G123440.1 vs. ExPASy TrEMBL
Match: A0A6J1KGZ7 (protein Dr1 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111495169 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 1.0e-76
Identity = 154/156 (98.72%), Postives = 155/156 (99.36%), Query Frame = 0


Query: 41  MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 100
           MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
Sbjct: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60

Query: 101 VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMQDSLKGGKWSNGAEMTE 160
           VCSKE+KRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMQDSLKGGKWSNGAEMTE
Sbjct: 61  VCSKEDKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMQDSLKGGKWSNGAEMTE 120

Query: 161 EEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 197
           EEALAEQQRMFAEARARMNGSNTAPKQ EPEQSLES
Sbjct: 121 EEALAEQQRMFAEARARMNGSNTAPKQLEPEQSLES 156

[Close]

BLAST of CmUC06G123440.1 vs. TAIR 10
Match: AT5G23090.2 (nuclear factor Y, subunit B13 )

HSP 1 Score: 248.1 bits (632), Expect = 6.0e-66
Identity = 127/156 (81.41%), Postives = 139/156 (89.10%), Query Frame = 0


Query: 41  MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 100
           M+PMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESN+
Sbjct: 1   MDPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESND 60

Query: 101 VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMQDSLKGGKWSNGAEMTE 160
           VC+KE+KRTIAPEHVLKAL+VLGF EYIEEVYAAYEQH+ ETMQD+ +  KW+ GA+MTE
Sbjct: 61  VCNKEDKRTIAPEHVLKALQVLGFGEYIEEVYAAYEQHKYETMQDTQRSVKWNPGAQMTE 120

Query: 161 EEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 197
           EEA AEQQRMFAEARARMNG  + P+   PE    S
Sbjct: 121 EEAAAEQQRMFAEARARMNGGVSVPQPEHPETDQRS 156

[Close]

BLAST of CmUC06G123440.1 vs. TAIR 10
Match: AT5G23090.1 (nuclear factor Y, subunit B13 )

HSP 1 Score: 248.1 bits (632), Expect = 6.0e-66
Identity = 127/156 (81.41%), Postives = 139/156 (89.10%), Query Frame = 0


Query: 41  MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 100
           M+PMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESN+
Sbjct: 1   MDPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESND 60

Query: 101 VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMQDSLKGGKWSNGAEMTE 160
           VC+KE+KRTIAPEHVLKAL+VLGF EYIEEVYAAYEQH+ ETMQD+ +  KW+ GA+MTE
Sbjct: 61  VCNKEDKRTIAPEHVLKALQVLGFGEYIEEVYAAYEQHKYETMQDTQRSVKWNPGAQMTE 120

Query: 161 EEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 197
           EEA AEQQRMFAEARARMNG  + P+   PE    S
Sbjct: 121 EEAAAEQQRMFAEARARMNGGVSVPQPEHPETDQRS 156

[Close]

BLAST of CmUC06G123440.1 vs. TAIR 10
Match: AT5G08190.1 (nuclear factor Y, subunit B12 )

HSP 1 Score: 244.2 bits (622), Expect = 8.7e-65
Identity = 127/149 (85.23%), Postives = 137/149 (91.95%), Query Frame = 0


Query: 41  MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 100
           M+PMDIVGKSKEDASLPKATMTKIIKEMLP DVRVARDAQDLLIECCVEFINL+SSESNE
Sbjct: 1   MDPMDIVGKSKEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLISSESNE 60

Query: 101 VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMQDSLKGGKWSNGAEMTE 160
           VC+KE+KRTIAPEHVLKAL+VLGF EY+EEVYAAYEQH+ ETMQDS +  K ++GAEMTE
Sbjct: 61  VCNKEDKRTIAPEHVLKALQVLGFGEYVEEVYAAYEQHKYETMQDSQRSVKMNSGAEMTE 120

Query: 161 EEALAEQQRMFAEARARMNGSNTAPKQPE 190
           EEA AEQQRMFAEARARMNG  T P QPE
Sbjct: 121 EEAAAEQQRMFAEARARMNGGVTVP-QPE 148

[Close]

BLAST of CmUC06G123440.1 vs. TAIR 10
Match: AT5G23090.4 (nuclear factor Y, subunit B13 )

HSP 1 Score: 241.5 bits (615), Expect = 5.7e-64
Identity = 126/156 (80.77%), Postives = 138/156 (88.46%), Query Frame = 0


Query: 41  MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 100
           M+PMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESN+
Sbjct: 1   MDPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESND 60

Query: 101 VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMQDSLKGGKWSNGAEMTE 160
           VC+KE+KRTIAPEHVLKAL+VLGF EYIEEVYAAYEQH+ ETM D+ +  KW+ GA+MTE
Sbjct: 61  VCNKEDKRTIAPEHVLKALQVLGFGEYIEEVYAAYEQHKYETM-DTQRSVKWNPGAQMTE 120

Query: 161 EEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 197
           EEA AEQQRMFAEARARMNG  + P+   PE    S
Sbjct: 121 EEAAAEQQRMFAEARARMNGGVSVPQPEHPETDQRS 155

[Close]

BLAST of CmUC06G123440.1 vs. TAIR 10
Match: AT5G08190.2 (nuclear factor Y, subunit B12 )

HSP 1 Score: 238.0 bits (606), Expect = 6.3e-63
Identity = 126/149 (84.56%), Postives = 136/149 (91.28%), Query Frame = 0


Query: 41  MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 100
           M+PMDIVGKSKEDASLPKATMTKIIKEMLP DVRVARDAQDLLIECCVEFINL+SSESNE
Sbjct: 1   MDPMDIVGKSKEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLISSESNE 60

Query: 101 VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMQDSLKGGKWSNGAEMTE 160
           VC+KE+KRTIAPEHVLKAL+VLGF EY+EEVYAAYEQH+ ETM DS +  K ++GAEMTE
Sbjct: 61  VCNKEDKRTIAPEHVLKALQVLGFGEYVEEVYAAYEQHKYETM-DSQRSVKMNSGAEMTE 120

Query: 161 EEALAEQQRMFAEARARMNGSNTAPKQPE 190
           EEA AEQQRMFAEARARMNG  T P QPE
Sbjct: 121 EEAAAEQQRMFAEARARMNGGVTVP-QPE 147

The following BLAST results are available for this feature:

BLAST of CmUC06G123440.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589570.1	2.0e-79	98.76	Protein Dr1-like protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7023258.1	7.6e-79	98.14	Protein Dr1-like protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038879127.1	6.5e-78	100.00	protein Dr1 homolog isoform X2 [Benincasa hispida]	[more]
XP_008453352.1	1.1e-77	99.36	PREDICTED: protein Dr1 homolog [Cucumis melo]	[more]
XP_022134979.1	1.4e-77	99.36	protein Dr1 homolog isoform X2 [Momordica charantia]	[more]

BLAST of CmUC06G123440.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P49592	8.5e-65	81.41	Protein Dr1 homolog OS=Arabidopsis thaliana OX=3702 GN=DR1 PE=1 SV=1	[more]
Q55DJ5	6.8e-30	47.18	Protein Dr1 homolog OS=Dictyostelium discoideum OX=44689 GN=dr1 PE=3 SV=1	[more]
O14348	1.0e-25	43.80	Negative cofactor 2 complex subunit beta OS=Schizosaccharomyces pombe (strain 97...	[more]
B0Y0F3	3.0e-25	48.51	NCT transcriptional regulatory complex subunit B OS=Neosartorya fumigata (strain...	[more]
Q4WFF8	3.0e-25	48.51	NCT transcriptional regulatory complex subunit B OS=Neosartorya fumigata (strain...	[more]

BLAST of CmUC06G123440.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BW28	5.3e-78	99.36	protein Dr1 homolog OS=Cucumis melo OX=3656 GN=LOC103494097 PE=4 SV=1	[more]
A0A6J1C081	7.0e-78	99.36	protein Dr1 homolog isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007097 PE...	[more]
A0A6J1JDU1	2.0e-77	99.36	protein Dr1 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484903 PE=4 ...	[more]
A0A6J1E1R3	2.0e-77	99.36	protein Dr1 homolog isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430003 PE=...	[more]
A0A6J1KGZ7	1.0e-76	98.72	protein Dr1 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111495169 PE=4 ...	[more]

BLAST of CmUC06G123440.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23090.2	6.0e-66	81.41	nuclear factor Y, subunit B13	[more]
AT5G23090.1	6.0e-66	81.41	nuclear factor Y, subunit B13	[more]
AT5G08190.1	8.7e-65	85.23	nuclear factor Y, subunit B12	[more]
AT5G23090.4	5.7e-64	80.77	nuclear factor Y, subunit B13	[more]
AT5G08190.2	6.3e-63	84.56	nuclear factor Y, subunit B12	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 54..119 e-value: 4.4E-22 score: 78.1
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 44..185 e-value: 2.4E-41 score: 142.8
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 52..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..196
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 180..196
IPR044255	Protein Dr1 homolog	PANTHER	PTHR47173	PROTEIN DR1 HOMOLOG	coord: 41..195

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmUC06G123440	CmUC06G123440	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC06G123440.1-exon	CmUC06G123440.1-exon-CmU531Chr06:26958752..26959101	exon
CmUC06G123440.1-exon	CmUC06G123440.1-exon-CmU531Chr06:26959346..26959414	exon
CmUC06G123440.1-exon	CmUC06G123440.1-exon-CmU531Chr06:26960173..26960267	exon
CmUC06G123440.1-exon	CmUC06G123440.1-exon-CmU531Chr06:26960593..26960682	exon
CmUC06G123440.1-exon	CmUC06G123440.1-exon-CmU531Chr06:26961843..26961914	exon
CmUC06G123440.1-exon	CmUC06G123440.1-exon-CmU531Chr06:26962099..26962201	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC06G123440.1-three_prime_utr	CmUC06G123440.1-three_prime_utr-CmU531Chr06:26958752..26958939	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC06G123440.1-cds	CmUC06G123440.1-cds-CmU531Chr06:26958940..26959101	CDS
CmUC06G123440.1-cds	CmUC06G123440.1-cds-CmU531Chr06:26959346..26959414	CDS
CmUC06G123440.1-cds	CmUC06G123440.1-cds-CmU531Chr06:26960173..26960267	CDS
CmUC06G123440.1-cds	CmUC06G123440.1-cds-CmU531Chr06:26960593..26960682	CDS
CmUC06G123440.1-cds	CmUC06G123440.1-cds-CmU531Chr06:26961843..26961914	CDS
CmUC06G123440.1-cds	CmUC06G123440.1-cds-CmU531Chr06:26962099..26962201	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmUC06G123440.1	CmUC06G123440.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046982	protein heterodimerization activity