CmUC06G111960.1 (mRNA) Watermelon (USVL531) v1

Overview


Name	CmUC06G111960.1
Type	mRNA
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	LINE-1 retrotransposable element ORF2 protein
Location	CmU531Chr06: 4378088 .. 4380869 (+)
Sequence length	699
RNA-Seq Expression	CmUC06G111960.1
Synteny	CmUC06G111960.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAGTTTTCATGGTTAATAGTAACCAACTCCATGATTTGGTAGAAGCCATCTCTGTCCTCACCGAGACTTTCGATGACACGTTTGACCTCAAATTCTCACAGTCAAGGTTCTCTATAATGGCGGCTACATCACCTTCGTCTCGTTGCATTTTAGCACTACAATTATCCCCTAGTTTCTTCGATGTATATGCTTGCAACAAACTTGAGTATAAACTTGTTTACATCCAAAACTTTTATCATACTAAGTTCAATCTCCAACGCAATGGTTTTACTGAGTTGGGTTTCGCTTGTTTTGATTCTGACCAAGAGCCTGGTTTGTACTCTTTTTTCCATTTTCTTTATTCTATTTCTATTATATTCTTCTTTCTTTATTATCTCCATAGCTTTGAAATAAACAATCTTTTATCTTTCTTCATATTTTAGGTTCGTTTCATAATCATCTTTTCATTTCATTTTCAAATTGTTGTATTTCTTGATTTTCACATTTCTTGACATTGAATTCTTAGTCTTTTCTCCAAACAAATTTCTTGAAAAATACATTTTTTTCTTAGTTTTCAAAAGTTTACTTGGCTGATCTTGCATAAACGTTGGTGTTTATAAACTTATTTTCAAAAATAAAAAATTAGGATGACCTTGTTTTTAATTATTTGGTTTTTGATTTTTGATTTTTGAAATTTTTTGCTTGTTTTCCTTTTAACTTCCTTGTCATGGTTTTAAATTTTCAATTTTGATACTTCCTTCTCTTTTATGTTCGTAAGATTTGAAATTACCTTTCTTCATAATTTAGGTTTTCTTTGGTAATGATTTTTTTAAAACTTGATCTTGAAATTTTTTATACTTGTTTTTCTCTTAAAATTCAATGCCATGATTTTTGCATTTCACTTGTTTTTCTCTTAAAATTCTATGCCATGATTTTTGCATTTCTTGAAGAGACATTGAATTCTTAGTCATTTTTCCTTTTTTTTTTTTTTTTTAAAGAAAGATAGTTCTTTTTTTTCAAAATCTGCCTTAATTCTTGAAAAGTTGGTGAAAATTAATTAATAAAACAACAAAACTTATGAGTGAAAGTAGTGTCTATAAAATTAATTTTTTTTAAAAAAAAAAAAAAAAAAAAAACTAAGATGATCCTAGTTTTATAACCATGTCGATTTTATACTTTTGATAATTATGCTTGTTTACAACTTCTTTGACATAGCTTTCATTGTCATATATGGTTTGATATTTAAAAACATTAGTGAAACGAGATAGATATAAGAAATCAATAGATATAGGTGGTGTTTATAAATATTTAGCTAACAAAGCCTTAATAATCATTTTAAGCTTTTAACGAATTCACAATAGCTAATTAGACCTTGAATTTTGTGGCCATTCAAAATTTCGTCCGTTTTTATTAATTGACCATCTCTCTTCAGGATACCAAGCTCGAAATGATATCCGGATGCTTCTTGATATTGATGAAGATGGTTTGTAATGTCTAACTTGATTCAATTTCGATTATTCCTTCTTTATTATGTTATACATTTGAAATAACAATCTTACCTTTCTCCATAATTTAGGTCGTTTGATAATGATATATTTTAATTTGATTTTGAAATTTATATACTTCTTGGTTTTAACTTTTTCTTGAAGAAATATTGAATTTTTAGTCCTTTTTTACAACAAGTTTTTTTAGTTTCCAAAATTTGGTTGGGTTCTTAAAAACATTGGTAAAATTTGGTTAACAAAACAACAAAGCTTATGTAGAATCTATTAGCTTAATTTTAAAAAATAAAAAGTAAAAAAACTAGAACGACCCTATTTCATAACTATCTGGTTTTCGATTTTTTTTAAAAAGCTATTATGCTTCTTTTCTTACAATTCCTCTATTATGATTTTCATTTTCACATATTGTTTTTAGTTATCAAAATATTGTTTTATAAGCTTAATTTTCAAAAATCGAAAACTAAAACTAAGGTCTCGTTTGGTAACCATTTGGTTTTTGGTTTTTGAAAATTAAGACTATTTCCTTCACATTTTTTTTTATAATGATTTGCATATTTCTTAACTACAATGGTTGAATTCTAAGTAAAATTCCAAAAACAAAACTAAGTTTTCAAAAACTATATATTTTTTTTTGTTTTTAAATTTTGGCTTGATTTTTTAAACTATTGGGCCTAAATAGTTACCAAATGGCGCTTAAATGGTTATGGGTTAAAATTTTTTTTAACAAATTCACACAAATTAATTAGACCTTTAATTTGATTGACATTAAAATTTTCATTGGTTTTTATTCATTGACCATCTGTCTTCAGGATACCTAGATCGAAATGCGGTTCGAATCTTTGCTAATCCTGAAGCAGGTTTGTAATTACTTACTTGAGCCATTTGAATTGATTCTTTAATTTTGAATTAATTAGAATCTCATTTAATTTTCTAATTTCCCTTTTTGGGATCTTTCTTTTAGGTACTTATGAGAGAAATGATCTACCATTTTGTGCTTCGACTGATAGGATGGACGATACTTTCGAATTTGATTGTGCAAATTTTGTCTCCATTGAATCACAAGAGTTCATAAACATTATCACACGGTTTAGTAATTTTGATAATGGTAATAATATAATTGTAACTCAACAATTCTTCCCTTCACATACTATTTTGAAAGAAATTAAGTAGTTCAATGTTTTGTGATCTTGTTACAGTTCTTGTTACTCTATCAAGTTCACAAGTCAAGTTCTCTTATGGAAGCACACAGATTTTTCTAACTAAAGAGGTAAATATTTGGGTCTCTTTTGATGTTTAG

mRNA sequence

ATGTTAGTTTTCATGGTTAATAGTAACCAACTCCATGATTTGGTAGAAGCCATCTCTGTCCTCACCGAGACTTTCGATGACACGTTTGACCTCAAATTCTCACAGTCAAGGTTCTCTATAATGGCGGCTACATCACCTTCGTCTCGTTGCATTTTAGCACTACAATTATCCCCTAGTTTCTTCGATGTATATGCTTGCAACAAACTTGAGTATAAACTTGTTTACATCCAAAACTTTTATCATACTAAGTTCAATCTCCAACGCAATGGTTTTACTGAGTTGGGTTTCGCTTGTTTTGATTCTGACCAAGAGCCTGGTTTTTTTCAAAAGTTTACTTGGCTGATCTTGCATAAACGATACCAAGCTCGAAATGATATCCGGATGCTTCTTGATATTGATGAAGATGGATACCTAGATCGAAATGCGGTTCGAATCTTTGCTAATCCTGAAGCAGGTACTTATGAGAGAAATGATCTACCATTTTGTGCTTCGACTGATAGGATGGACGATACTTTCGAATTTGATTGTGCAAATTTTGTCTCCATTGAATCACAAGAGTTCATAAACATTATCACACGGTTTAGTAATTTTGATAATGTTCTTGTTACTCTATCAAGTTCACAAGTCAAGTTCTCTTATGGAAGCACACAGATTTTTCTAACTAAAGAGGTAAATATTTGGGTCTCTTTTGATGTTTAG

Coding sequence (CDS)

ATGTTAGTTTTCATGGTTAATAGTAACCAACTCCATGATTTGGTAGAAGCCATCTCTGTCCTCACCGAGACTTTCGATGACACGTTTGACCTCAAATTCTCACAGTCAAGGTTCTCTATAATGGCGGCTACATCACCTTCGTCTCGTTGCATTTTAGCACTACAATTATCCCCTAGTTTCTTCGATGTATATGCTTGCAACAAACTTGAGTATAAACTTGTTTACATCCAAAACTTTTATCATACTAAGTTCAATCTCCAACGCAATGGTTTTACTGAGTTGGGTTTCGCTTGTTTTGATTCTGACCAAGAGCCTGGTTTTTTTCAAAAGTTTACTTGGCTGATCTTGCATAAACGATACCAAGCTCGAAATGATATCCGGATGCTTCTTGATATTGATGAAGATGGATACCTAGATCGAAATGCGGTTCGAATCTTTGCTAATCCTGAAGCAGGTACTTATGAGAGAAATGATCTACCATTTTGTGCTTCGACTGATAGGATGGACGATACTTTCGAATTTGATTGTGCAAATTTTGTCTCCATTGAATCACAAGAGTTCATAAACATTATCACACGGTTTAGTAATTTTGATAATGTTCTTGTTACTCTATCAAGTTCACAAGTCAAGTTCTCTTATGGAAGCACACAGATTTTTCTAACTAAAGAGGTAAATATTTGGGTCTCTTTTGATGTTTAG

Protein sequence

MLVFMVNSNQLHDLVEAISVLTETFDDTFDLKFSQSRFSIMAATSPSSRCILALQLSPSFFDVYACNKLEYKLVYIQNFYHTKFNLQRNGFTELGFACFDSDQEPGFFQKFTWLILHKRYQARNDIRMLLDIDEDGYLDRNAVRIFANPEAGTYERNDLPFCASTDRMDDTFEFDCANFVSIESQEFINIITRFSNFDNVLVTLSSSQVKFSYGSTQIFLTKEVNIWVSFDV

Homology

[Close]

BLAST of CmUC06G111960.1 vs. NCBI nr
Match: XP_023548336.1 (uncharacterized protein LOC111807004 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 173.3 bits (438), Expect = 2.4e-39
Identity = 101/213 (47.42%), Postives = 133/213 (62.44%), Query Frame = 0


Query: 11  LHDLVEAISVLTETFDDTFDLKFSQSRFSIMAATSPSSRCILALQLSPSFFDVYACNKLE 70
           +HDLV+A SVL ETFDD FD+KFS + FSIMAAT+PSSRCI+ALQLSP FF+ Y C++L 
Sbjct: 1   MHDLVDATSVLAETFDDIFDIKFSPTMFSIMAATTPSSRCIIALQLSPQFFNAYLCHQLH 60

Query: 71  YKLVYIQNFYHTKFNLQRNGFTELGFACFDSDQEPGFFQKFTWLILHKRYQARNDIRMLL 130
           YK +YI++FY    N +R GF+ L F   + D+            +  R  +   I +  
Sbjct: 61  YKFIYIEDFYDFMHNFERKGFSSLTFTFPEPDRVDS--------NVALRVMSEACINVYS 120

Query: 131 DIDEDGYLDRNAVRIFANPEAGTYERNDLPFCASTDRMDDTFEFDCANFVSIESQEFINI 190
                 +L   A+  F +   G +E  +LP   S+  M D   FD   FVSI+SQEFINI
Sbjct: 121 CTIPWRFLAATAILKFFHGSNGHFEEVELPMFPSSKVM-DVGPFDFGTFVSIDSQEFINI 180

Query: 191 ITRFSNFDNVLVTLSSSQVKFSYGSTQIFLTKE 224
           +T F++FD VLVTL +SQV FSYG T+I LT+E
Sbjct: 181 VTCFNDFDYVLVTLINSQVMFSYGKTKIVLTQE 204

[Close]

BLAST of CmUC06G111960.1 vs. NCBI nr
Match: XP_023006011.1 (uncharacterized protein LOC111498888 [Cucurbita maxima])

HSP 1 Score: 172.9 bits (437), Expect = 3.1e-39
Identity = 100/213 (46.95%), Postives = 134/213 (62.91%), Query Frame = 0


Query: 11  LHDLVEAISVLTETFDDTFDLKFSQSRFSIMAATSPSSRCILALQLSPSFFDVYACNKLE 70
           +HDLV+A SVL ET+DD FD+KFS + FSIMAAT+PSSRCI+ALQLSP FF+ Y C++L 
Sbjct: 1   MHDLVDATSVLAETYDDIFDIKFSPTMFSIMAATTPSSRCIIALQLSPQFFNAYLCHQLH 60

Query: 71  YKLVYIQNFYHTKFNLQRNGFTELGFACFDSDQEPGFFQKFTWLILHKRYQARNDIRMLL 130
           YK +YI++FY    N +R GF+ L F   + D+            +  R  +   I +  
Sbjct: 61  YKFIYIESFYDFMHNFERKGFSSLTFTFPEPDRVDS--------NVALRVMSEACINVYS 120

Query: 131 DIDEDGYLDRNAVRIFANPEAGTYERNDLPFCASTDRMDDTFEFDCANFVSIESQEFINI 190
                 +L   A+  F +   G +E  +LP   S+  M D   FD   FVSI+SQEFINI
Sbjct: 121 CTIPWRFLAATAILKFFDGSNGHFEEVELPMFPSSKVM-DVGAFDFGTFVSIDSQEFINI 180

Query: 191 ITRFSNFDNVLVTLSSSQVKFSYGSTQIFLTKE 224
           +T F++FD VLVTL++SQV FSYG T+I LT+E
Sbjct: 181 VTCFNDFDYVLVTLTNSQVIFSYGKTKIILTQE 204

[Close]

BLAST of CmUC06G111960.1 vs. NCBI nr
Match: XP_022958855.1 (uncharacterized protein LOC111460009 [Cucurbita moschata])

HSP 1 Score: 168.3 bits (425), Expect = 7.7e-38
Identity = 98/213 (46.01%), Postives = 130/213 (61.03%), Query Frame = 0


Query: 11  LHDLVEAISVLTETFDDTFDLKFSQSRFSIMAATSPSSRCILALQLSPSFFDVYACNKLE 70
           +HDLV+A SVL ET+DD FD+KFS + FSIMAAT+PSS CI+ LQLSP FF+ Y C++L 
Sbjct: 1   MHDLVDATSVLAETYDDIFDIKFSPTMFSIMAATTPSSHCIIELQLSPQFFNAYLCHQLH 60

Query: 71  YKLVYIQNFYHTKFNLQRNGFTELGFACFDSDQEPGFFQKFTWLILHKRYQARNDIRMLL 130
           YK +YI++FY    N +R GF+ L F   + D+            +  R  +   I +  
Sbjct: 61  YKFIYIEDFYDFMHNFERKGFSSLTFTFPEPDRVDS--------NVAVRVMSEACINVYS 120

Query: 131 DIDEDGYLDRNAVRIFANPEAGTYERNDLPFCASTDRMDDTFEFDCANFVSIESQEFINI 190
                 +L   A+  F +   G +E  +LP   S   M D   FD   FVSI+SQEFINI
Sbjct: 121 CTIPWRFLAATAILKFFHGSNGHFEEVELPMFPSCKVM-DVGAFDIGTFVSIDSQEFINI 180

Query: 191 ITRFSNFDNVLVTLSSSQVKFSYGSTQIFLTKE 224
           +T F++FD VLVTL +SQV FSYG T+I LT+E
Sbjct: 181 VTYFNDFDYVLVTLINSQVMFSYGKTKIVLTEE 204

[Close]

BLAST of CmUC06G111960.1 vs. NCBI nr
Match: XP_008458680.1 (PREDICTED: uncharacterized protein LOC103498008 [Cucumis melo])

HSP 1 Score: 122.1 bits (305), Expect = 6.4e-24
Identity = 79/190 (41.58%), Postives = 103/190 (54.21%), Query Frame = 0


Query: 10  QLHDLVEAISVLTETFDDTFDLKFSQSRFSIMAATSPSSRCILALQLSPSFFDVYACNKL 69
           Q+H  +EAISVLTET +D FDLKFS + FSIM A SPSSRCI++LQLSP  F  Y C  L
Sbjct: 8   QIHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTL 67

Query: 70  EYKLVYIQNFYHTKFNLQRNGFTELGFACFDSDQEPGFFQKFTWLILHKRYQARNDIRML 129
            +K ++ + F  T    Q  GF+ L F+    +Q+P           H  Y +       
Sbjct: 68  HHKFLFFRAFCDTMQECQSTGFSSLIFSF--QEQDP-----------HDTYGS------- 127

Query: 130 LDIDEDGYLDRNAVRIFANPEAGTYERNDLPFCASTDRMDDTFEFDCANFVSIESQEFIN 189
                      +A+  F N E G +    +    S++++ D  EFD   FVSIESQEFIN
Sbjct: 128 -----------DALLQFTNSERGCHMIKTVRLYPSSEKI-DVGEFDFGTFVSIESQEFIN 165

Query: 190 IITRFSNFDN 200
           II RF +FDN
Sbjct: 188 IIKRFVDFDN 165

[Close]

BLAST of CmUC06G111960.1 vs. NCBI nr
Match: XP_038875059.1 (uncharacterized protein LOC120067585 [Benincasa hispida])

HSP 1 Score: 105.1 bits (261), Expect = 8.0e-19
Identity = 54/68 (79.41%), Postives = 57/68 (83.82%), Query Frame = 0


Query: 158 DLPFCASTDRMDDTFEFDCANFVSIESQEFINIITRFSNFDNVLVTLSSSQVKFSYGSTQ 217
           DLPFCAST  MDD  EFD A FVSIESQ+FINIIT FSNFDNVLVT+SSSQVKFSYG T 
Sbjct: 2   DLPFCASTGSMDDVLEFDFAKFVSIESQDFINIITGFSNFDNVLVTISSSQVKFSYGRTT 61

Query: 218 IFLTKEVN 226
           I LT+E N
Sbjct: 62  IILTQEEN 69

[Close]

BLAST of CmUC06G111960.1 vs. ExPASy TrEMBL
Match: A0A6J1KWL1 (uncharacterized protein LOC111498888 OS=Cucurbita maxima OX=3661 GN=LOC111498888 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 1.5e-39
Identity = 100/213 (46.95%), Postives = 134/213 (62.91%), Query Frame = 0


Query: 11  LHDLVEAISVLTETFDDTFDLKFSQSRFSIMAATSPSSRCILALQLSPSFFDVYACNKLE 70
           +HDLV+A SVL ET+DD FD+KFS + FSIMAAT+PSSRCI+ALQLSP FF+ Y C++L 
Sbjct: 1   MHDLVDATSVLAETYDDIFDIKFSPTMFSIMAATTPSSRCIIALQLSPQFFNAYLCHQLH 60

Query: 71  YKLVYIQNFYHTKFNLQRNGFTELGFACFDSDQEPGFFQKFTWLILHKRYQARNDIRMLL 130
           YK +YI++FY    N +R GF+ L F   + D+            +  R  +   I +  
Sbjct: 61  YKFIYIESFYDFMHNFERKGFSSLTFTFPEPDRVDS--------NVALRVMSEACINVYS 120

Query: 131 DIDEDGYLDRNAVRIFANPEAGTYERNDLPFCASTDRMDDTFEFDCANFVSIESQEFINI 190
                 +L   A+  F +   G +E  +LP   S+  M D   FD   FVSI+SQEFINI
Sbjct: 121 CTIPWRFLAATAILKFFDGSNGHFEEVELPMFPSSKVM-DVGAFDFGTFVSIDSQEFINI 180

Query: 191 ITRFSNFDNVLVTLSSSQVKFSYGSTQIFLTKE 224
           +T F++FD VLVTL++SQV FSYG T+I LT+E
Sbjct: 181 VTCFNDFDYVLVTLTNSQVIFSYGKTKIILTQE 204

[Close]

BLAST of CmUC06G111960.1 vs. ExPASy TrEMBL
Match: A0A6J1H4N0 (uncharacterized protein LOC111460009 OS=Cucurbita moschata OX=3662 GN=LOC111460009 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 3.7e-38
Identity = 98/213 (46.01%), Postives = 130/213 (61.03%), Query Frame = 0


Query: 11  LHDLVEAISVLTETFDDTFDLKFSQSRFSIMAATSPSSRCILALQLSPSFFDVYACNKLE 70
           +HDLV+A SVL ET+DD FD+KFS + FSIMAAT+PSS CI+ LQLSP FF+ Y C++L 
Sbjct: 1   MHDLVDATSVLAETYDDIFDIKFSPTMFSIMAATTPSSHCIIELQLSPQFFNAYLCHQLH 60

Query: 71  YKLVYIQNFYHTKFNLQRNGFTELGFACFDSDQEPGFFQKFTWLILHKRYQARNDIRMLL 130
           YK +YI++FY    N +R GF+ L F   + D+            +  R  +   I +  
Sbjct: 61  YKFIYIEDFYDFMHNFERKGFSSLTFTFPEPDRVDS--------NVAVRVMSEACINVYS 120

Query: 131 DIDEDGYLDRNAVRIFANPEAGTYERNDLPFCASTDRMDDTFEFDCANFVSIESQEFINI 190
                 +L   A+  F +   G +E  +LP   S   M D   FD   FVSI+SQEFINI
Sbjct: 121 CTIPWRFLAATAILKFFHGSNGHFEEVELPMFPSCKVM-DVGAFDIGTFVSIDSQEFINI 180

Query: 191 ITRFSNFDNVLVTLSSSQVKFSYGSTQIFLTKE 224
           +T F++FD VLVTL +SQV FSYG T+I LT+E
Sbjct: 181 VTYFNDFDYVLVTLINSQVMFSYGKTKIVLTEE 204

[Close]

BLAST of CmUC06G111960.1 vs. ExPASy TrEMBL
Match: A0A1S3C9N3 (uncharacterized protein LOC103498008 OS=Cucumis melo OX=3656 GN=LOC103498008 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 3.1e-24
Identity = 79/190 (41.58%), Postives = 103/190 (54.21%), Query Frame = 0


Query: 10  QLHDLVEAISVLTETFDDTFDLKFSQSRFSIMAATSPSSRCILALQLSPSFFDVYACNKL 69
           Q+H  +EAISVLTET +D FDLKFS + FSIM A SPSSRCI++LQLSP  F  Y C  L
Sbjct: 8   QIHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTL 67

Query: 70  EYKLVYIQNFYHTKFNLQRNGFTELGFACFDSDQEPGFFQKFTWLILHKRYQARNDIRML 129
            +K ++ + F  T    Q  GF+ L F+    +Q+P           H  Y +       
Sbjct: 68  HHKFLFFRAFCDTMQECQSTGFSSLIFSF--QEQDP-----------HDTYGS------- 127

Query: 130 LDIDEDGYLDRNAVRIFANPEAGTYERNDLPFCASTDRMDDTFEFDCANFVSIESQEFIN 189
                      +A+  F N E G +    +    S++++ D  EFD   FVSIESQEFIN
Sbjct: 128 -----------DALLQFTNSERGCHMIKTVRLYPSSEKI-DVGEFDFGTFVSIESQEFIN 165

Query: 190 IITRFSNFDN 200
           II RF +FDN
Sbjct: 188 IIKRFVDFDN 165

[Close]

BLAST of CmUC06G111960.1 vs. ExPASy TrEMBL
Match: A0A6J1L2R2 (uncharacterized protein LOC111499308 OS=Cucurbita maxima OX=3661 GN=LOC111499308 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 6.9e-16
Identity = 68/223 (30.49%), Postives = 107/223 (47.98%), Query Frame = 0


Query: 2   LVFMVNSNQLHDLVEAISVLTETFDDTFDLKFSQSRFSIMAATSPSSRCILALQLSPSFF 61
           ++F    NQ+ DLV+A SV+    DD  D+KFS+  F+IMA + P+   ++AL L P FF
Sbjct: 5   IIFKFVLNQMQDLVDAASVVASA-DDMADMKFSREMFAIMADSYPALGGVIALHLWPQFF 64

Query: 62  DVYACNKLEYKLVYIQNFYHTKFNLQRNGFTELGFACFDSDQEPGFFQKFTWLILHKRYQ 121
           D Y CN+L     +++N +    +++ +GF  L F     +                ++Q
Sbjct: 65  DEYVCNELLKSWTFVKNLFPLMIDMEESGFNSLSFTVTYPES------------AELKFQ 124

Query: 122 ARNDIRMLLDIDEDGYLDRNAVRIFANPEAGTYERNDLPFCASTDRMDDTFEFDCANFVS 181
           A N +              N V     P     E  D               FD ++FVS
Sbjct: 125 APNGL-------------SNEVEFELIPSLDPLEVGD---------------FDFSSFVS 184

Query: 182 IESQEFINIITRFSNFDNVLVTLSSSQVKFSYG-STQIFLTKE 224
           ++S+EF+NI+T +  FD V VT++S++V FSY    +  LT+E
Sbjct: 185 LDSEEFVNIVTEYHMFDYVHVTVTSTRVIFSYAIMLETILTQE 186

[Close]

BLAST of CmUC06G111960.1 vs. ExPASy TrEMBL
Match: A0A6J1H801 (uncharacterized protein LOC111460397 OS=Cucurbita moschata OX=3662 GN=LOC111460397 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 8.4e-14
Identity = 65/214 (30.37%), Postives = 101/214 (47.20%), Query Frame = 0


Query: 11  LHDLVEAISVLTETFDDTFDLKFSQSRFSIMAATSPSSRCILALQLSPSFFDVYACNKLE 70
           + DLV+A SV+    DD  D+KF +  F+IMA + P+   ++AL L P FFD Y CN+L 
Sbjct: 1   MQDLVDAASVVASA-DDMADMKFCREMFAIMADSYPALGGVIALHLWPQFFDEYVCNELL 60

Query: 71  YKLVYIQNFYHTKFNLQRNGFTELGFACFDSDQEPGFFQKFTWLILHKRYQARNDIRMLL 130
               +++N +    +++ +GF  L F     +                ++QA N +    
Sbjct: 61  KSWTFVKNLFPLMIDMEESGFNSLTFTVTYPES------------AELKFQAPNGL---- 120

Query: 131 DIDEDGYLDRNAVRIFANPEAGTYERNDLPFCASTDRMDDTFEFDCANFVSIESQEFINI 190
                     N V     P     E  D               FD ++FVS+ES+EF+NI
Sbjct: 121 ---------SNDVEFELIPSLDPLEVGD---------------FDFSSFVSLESEEFVNI 173

Query: 191 ITRFSNFDNVLVTLSSSQVKFSYG-STQIFLTKE 224
           +T +  FD V VT++S++V FSY    +  LT+E
Sbjct: 181 VTEYHMFDYVHVTVTSTRVIFSYAIMLETILTQE 173

The following BLAST results are available for this feature:

BLAST of CmUC06G111960.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023548336.1	2.4e-39	47.42	uncharacterized protein LOC111807004 [Cucurbita pepo subsp. pepo]	[more]
XP_023006011.1	3.1e-39	46.95	uncharacterized protein LOC111498888 [Cucurbita maxima]	[more]
XP_022958855.1	7.7e-38	46.01	uncharacterized protein LOC111460009 [Cucurbita moschata]	[more]
XP_008458680.1	6.4e-24	41.58	PREDICTED: uncharacterized protein LOC103498008 [Cucumis melo]	[more]
XP_038875059.1	8.0e-19	79.41	uncharacterized protein LOC120067585 [Benincasa hispida]	[more]

BLAST of CmUC06G111960.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC06G111960.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KWL1	1.5e-39	46.95	uncharacterized protein LOC111498888 OS=Cucurbita maxima OX=3661 GN=LOC111498888...	[more]
A0A6J1H4N0	3.7e-38	46.01	uncharacterized protein LOC111460009 OS=Cucurbita moschata OX=3662 GN=LOC1114600...	[more]
A0A1S3C9N3	3.1e-24	41.58	uncharacterized protein LOC103498008 OS=Cucumis melo OX=3656 GN=LOC103498008 PE=...	[more]
A0A6J1L2R2	6.9e-16	30.49	uncharacterized protein LOC111499308 OS=Cucurbita maxima OX=3661 GN=LOC111499308...	[more]
A0A6J1H801	8.4e-14	30.37	uncharacterized protein LOC111460397 OS=Cucurbita moschata OX=3662 GN=LOC1114603...	[more]

BLAST of CmUC06G111960.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.70.10.10		coord: 3..232 e-value: 1.0E-6 score: 30.3

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmUC06G111960	CmUC06G111960	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC06G111960.1-exon	CmUC06G111960.1-exon-CmU531Chr06:4378088..4378407	exon
CmUC06G111960.1-exon	CmUC06G111960.1-exon-CmU531Chr06:4378642..4378676	exon
CmUC06G111960.1-exon	CmUC06G111960.1-exon-CmU531Chr06:4379503..4379553	exon
CmUC06G111960.1-exon	CmUC06G111960.1-exon-CmU531Chr06:4380382..4380429	exon
CmUC06G111960.1-exon	CmUC06G111960.1-exon-CmU531Chr06:4380534..4380677	exon
CmUC06G111960.1-exon	CmUC06G111960.1-exon-CmU531Chr06:4380769..4380869	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC06G111960.1-cds	CmUC06G111960.1-cds-CmU531Chr06:4378088..4378407	CDS
CmUC06G111960.1-cds	CmUC06G111960.1-cds-CmU531Chr06:4378642..4378676	CDS
CmUC06G111960.1-cds	CmUC06G111960.1-cds-CmU531Chr06:4379503..4379553	CDS
CmUC06G111960.1-cds	CmUC06G111960.1-cds-CmU531Chr06:4380382..4380429	CDS
CmUC06G111960.1-cds	CmUC06G111960.1-cds-CmU531Chr06:4380534..4380677	CDS
CmUC06G111960.1-cds	CmUC06G111960.1-cds-CmU531Chr06:4380769..4380869	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmUC06G111960.1	CmUC06G111960.1-protein	polypeptide