CmUC06G109190.1 (mRNA) Watermelon (USVL531) v1

Overview


Name	CmUC06G109190.1
Type	mRNA
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Trigger factor-like isoform X1
Location	CmU531Chr06: 1004864 .. 1014030 (-)
Sequence length	1401
RNA-Seq Expression	CmUC06G109190.1
Synteny	CmUC06G109190.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAGAAAAAAACAGAAGGAAAAAAAAAAAGCCACAACGGCATCGTATTTGGACTCGGATAAGTCTCTACTCTGAGAACCGGAGAAAGAAACTTCAAACTGAAGCACTGAGCCGCGCTTGGAAAAATGGTGTCCGCCACCGCCACCGCCACCGCAACCGCAACTGCAACGGTAACCAACATTGCTTCAGAATTCCGGCGGCCAATATTCACCAAAGTAAGCAATTCTATGCATTAGCCTTTTTCGATTCTAAATATTCCTCAGAAACCAAACCAATGACTCGAATCTCTAAGCTCCACCGCATTTTGCGGCCTTCCGATAAGTTTAGGATATTTTCACTTCAAATTCGCTTTTTGTGTTTCAGGTTCCTGTTAAGGGCTATTGCCGCAATGCCCTGGTTTGTCTAAACTTTGGAGGTGTTGAATTTGATAATGTACAAGATGGGTTGTGTAGGAGGTAAACATGTATTTTGGTTAGTTTCCAATTTCGATGTTGATTCTTAATTTCTTGTTTGTTTAGTGAGAAGTGTAATGACATATATAGCTCGTTCGTTTTCTATTTGGTGAATTGTGCATAAAAACTGATGGATAGAAGTGGGGAACATTTTTTCATTGCCAGGTCGTCATTTTCTTATAGTCCCCATAAAATGGGTTCCAGATTTTTGTCCAAACCGACGTCCGTAGCTAGTTCAGGTAATTCTGCATACTTCGTTATCATCTTGGTTGAACCTTTTACAGTAAAGACTGAATTACAAATTTTAAACTATAAGAACTAAGTCGTTTCATACTTAAAGTTGATTAAGTCGGTTATTGGAAATTTTAATCTACAGGAATCAAATTGTTAGATACTGAGGTTCGTGGACTAATTGAATTGTTTTATTTGATAGTATATTTTAACCTTTACAATTATTCTTTTCTGCTCGTCCCCTTGTTTTCTGGGAGTTTAGTTTATTTTTAATGTAGGATGGGAAGAGAAGTACAAAAATAGAGTAATTGGGAAGCGAATGACACAAGTAAGATATTATTACTGGTGAATTCCTGTTTAGTATGCACGAAGAGAAGCAAGCATTATTATCTTCTATATCATGTATTAGAAAATTGTAATAAATCGTTGGTAAGAACACAATAACGGTTTTGAATATTGCAAATCATGCTTATGTAACATGATTGTAGCCCTAATAAATCATGGGTAAGAAACACAATAGCAGATTTGGTAAAACTTATCCCCGTTTTGTCATTATTTTGTAAGTTATTAACAGTCACTTGTCAATCAACTCTAGTTGTACAAAAAAGACCCTTTTCAGCTTAGGCTTATGTTGTTTTGTTGGTCTTCTGTTTTGATGTCATAGGTTTCGAGGCAGCCATCACAGATTACAAAGGCAATGCAATAACGTTGAAAAATGCTAAAGTAGTTGTAGAATCTGAAGATGAAAACCAGATACAAGTAAGGCTTACCCATGTGAACTAGTTGAAGCATCCATTACAATTTTTGTTGCAGCATAGAGTTTTTTTTTTTTTTTTTTCCTTTCCTTTCTTTTCTTTTTTTAATTAAACTTTAAGAATCAATTTTGTTAATGGTATGAAATTACGAAAGAAGGGGGAAAAACCTACTCCAAATGAGACTCTCCAATTGGATATAAAAGAAGCATGGTGAAAGAGATGAGAGCATTCACACTAAGAAATTGTCGTAAAAGCGATAGAAGAAAGCCCTTGTAAAGTGCATCCATAAGAGCTTTTTTTCTTAGTTGAAAGGATGACCCCCAAAAACATACTAGAGGAGGAGGAGGAGATTTTGAGGGAGAGCTGTATGTCGACCCCCCAAAGCATGATAGCTGCCCCCATAATTTTGATGCCATCAATATAAAAAGGACACATTTTACTTCCATTTACTTGCATTCTAGATTGTTTGCAACAATAATATTGGGTAAGAAACAGGATTATATTATTGACAGAAGAGAGAAAAACAGCCTAAGGGCCAGGGAAGAGGGATCCACCTCCCAACACCTACTAAAAGAGGGCTTTCATATTGCAAAGGAGCATGGTAAGGTTGTATTACAAAAGAACTTTCTGTGTTTTATACACCACCAAGATAACATTAGCTGTGCAGTTATACAAAAAATATAAAAAATGAGAGGATGTATCTTCAAATGTTCATTGATTCCTTTCCAAGCAAACATGCCATAGTAAGACCGTAGTCTCACAGTTCCACACGAATTCCACCCTCTTTGCCAACTCCCAACCAGATAAAACTTCAAGGAGCCAGACATCCACTTGCTTAGGCAGATAGCAAGAAATGCCAAAAACTTCAACACAGCAAAAACCCAACCTCTAGCAACAGAAGGACAGTGAAGAAAAAGCTGATAAATAAATTATGAGTTTCCCAGTCAGAGAATAATTTGACGATGAAAATGGTCTTGTGGTTACCGTCTAATTTGACAATGAAAATGGCCCCCATCCTTTTGAATGAGTGTCTAAAGGGATTAAAGGTATTCACTAGGATTTGTGGAAAGATATTTCAAAACGGCTTCGTTCTTTCATTCACTTGGTTCGTGGTGTGGTGGGGGAGGGGAGCGATACTTACGTTGGGGAAGTTCATTGGGTGGGGGAGAAACCACTTTGTGTTAGTTTCCTCGATTGTATCACTTGTCATCTCTCAAGAATCATTTCGTTGTCGATTTTTTAGTGTGGTTTAGGAGCTCTTGCTCCTTTTCATTTGGGTTACGTCGTTCTCTTTCTAATAGAGAAACAATTGTTGTGGCTACTTTTCTTTCTTTACTCAAGGGCCACCTCTTTAGATTGGGGGGAAGGGATGTCAAATTTTGAAACCCCAATCCTTTGGATGGGTTCTCATGCAAGCCCTTCTTTCCTTATTTGGTTGATTCTTCCCCCTTAGGTGAGTCAGTTTTTAGTGCTTTGGAGGATTAAGGTCCCAAGAAAGGTAAGGTTCTTTATTTGGCCGGTTCTTCACTGCCGTGTTAACGCGTGTCTAGGCTTGTCTGGAAGTTGCCTTTGTTTGTTTGGCCTTTCTGTTGTATTCTTTGTTGGAAGACGGAGGAAGACCTGGACCATATTCTTTGACATTGTGACTTTGCATGTGGTGTCTAGGATTCTTCTTTTCTAGATGTGTGGTATGAGATGCCCGTCCTATGATTGAGGAGTTCCTCCTCAATTTGCCTTTTGGGGAGAAAGGTCGATTTCTTTGGCTTGCTGGAGTGTGTGCGGTTTTATTATGGGTTTTCTGCTGTGAGCAGAATAGTTGGGTGTTTAGGGGAGTGGAGAGGGATCCTAGGGAGTTATGGGCCCTTGTTCGGTTTCATGTTTCTCTTTGGACTTCAATTTCGAAGACTTTTTTGTAATTATTCTATAGGTGTGATTTTGTATAGTTGGAGTCCCTTTTTGTAAAGAGAATCTCCCTCTTTTTGGGCTTGGTTTTTTTGTATGACCATGTATTCTTTCATTTTTTTCCTCAATGAAAGTTGTTATTTTCATATATTCATTTGAAGTTTATTCATTCTTATTCATCCTTCTTTCTTATTTGTAGGCTATTTATCATAAGCAGACATCAGCTTACTTTACTCCAAACCTCACCTGCACAAGTGTGTCTTTTCCAAGTCAAATAAGATACGGTCACAGAAAAATTTCTCTGAGGTAATTTCAATTTCATTCGACCAAATAATGTTTCTAATAATAACCCAGATTATGAATGATTGTGTCCCAAATTAGGAAGACTTCAGCATCTAATTGATTAACTCTGAACTTTTCTTTGATATGATGATGCTGATTGGTCGACCATCAAAGTTTACGAAACATGTAAACTCATAAGTGACTAGCTTTAATGGGAAATTTTGACTTCTAATCTGCATGCAAGTATAAATGCTCATGATCTGCTTCATTTTTCTCAATTGGATGTTTCACATCCTGTCCTGTTATTGAGTCACTCAAAGCCGAAAGTCGACATGGAGTATCATCTGAAATCACCAATTCACCATCAAGACGATGAATACACTTACGGATAGAATTTTCTTTTGTGGAGGAAAGAACCAGCTTTCATCTAAATGAAACTACAAAAAGGGCCACAAAAATCAGGAACATGGTAAAATAGAATTAAAAGAATGAATGCTAACTATGGAATCCCCAAAAACAAACAGAGGCACATGATGAAGCTGTTGATTGTTTGTAGTTTTTGTTTATGGTATCAACTATGGAATCCTGTTAGATACCTTCTTCCCTGCACACAAAATGTATCTAACAAGCAACCCAAAGACAGAAATCCCAGCCAAAAGCTCAAAGTTTATTTATCAACAAGGATCATTCACAAGAGAAATATCCCAAGTTCAGGACCAGTCACAAGATGATAGAAAGAAGAAATAGATGATAGCAAAAGAAGAAATAGATGATAGCAAAAAAAGAAAAAGGTAACAAGGTGAGAAATTCGAGAGTGCCTCCCTCTCCAAGCTTCATTCAGCTCCTCAAAATTTCCATGCCTCCAAATGCTCCCCCAAAACCCCTCATAAACCTCTCAGCTGTTGGTCCCACTGGTCCCCCCTTCTCTAACCGAATTTGCAGCCACAATCTACTTGTTATTTCCTCTTTTACCCTTCTTATGATATGTGTGTATGATCGGGGGGTCTAACAAATCCCCAAAAACAAACAGAGGCACATGATGCTGCAGCTGTTGATCCTGGTTGCAAACAGACCCCAGAGATAAAAAGATGAACTATAACACACATAAACACAAGTTTGAATTCACCATGAAATAACTTTGGTTCACATTTAGTTTGATAGCTCAAGCTGCTACAATTCGTTTATAGTGAGAAGAAAGCAATTTTGAAATGCCATTGACCTTGACTTGAAGTTGATGAAAATGATATATTTGGTTGTGTTCATTGTAGAGATTAGAGATAGTGTTTTGTCTTATAGAAAGGAAATTCGTTCTTGATCATCAAGAAACACATTCTAAAAATGTCTACTTTCTAAGCTACACTTCGGCTGGTCTCTGGGATGCCCACAAACCACATTGTCTCATGTCGAACACAAAAGGTTAAATCATTAAAGAAAGAAAATAAGGAAGGAGGGGAGAAAGAAGGGAGGAGGGGAGAAAGGAGGAGAGAGAAGGGAAGAGAGAGAAGAGAACTTTTTAAAAAAAAAAAATTAAATGTTTTAAAGCAATAAAAATATTATTCCAAACAACTATTCCTAAAAACTCTGAGGACTAAAAAGGTACATTTTGGAACTTTAGAACCAAACACACCTATTACGAAAAACTCGGAGACTAAAAAGTTATTTTTCCTTTGAACATTTTACAAATTCAGAATTTAGCATGTGATCTAGTAGGTGGGTTATTAGTATTAATTGGGGAGGAAATAATATTGCATGGTTTGAAATTTAAACCATATGCTCCAAACTAAAATATTTAAGCAAATAAGTTATTGCAGGCTTATTGGTCTTTTTAGTATATTCTTAATACTTTGAGATGAATGAATCCAACAATTAGTCATTAAGGCGATCGGCACGATGGTTAGATTTTCATTTGGAAATATTTTGATTGTTTAAAAAGAGATTGACATATTGACATCATTTATGACTACTTCATCTAATTGAGATTGCGTGTAAGTCATTTCAACTGTCCAACTGACGTATGTAGCCATAATCATTTGTATGGTTTTGAAAGACAAGCGGTGGTCTATGTTCCTAATTATAAACGTTATTTGTTCGTTCTATCTACAGTAAAAATAACAGATATCTTCCAGCTGCTTGTGCTGTGTTATCAGGTTATAATACATTTCCTTCTGTACCAAGAGCAATTTTTAAAATTTCCATTTGTGTGAGGACAATGTTGGATCAAACTTTTAATTTTATTGTGAGCAGAAGATGTGAGTGTTTCTTCTTCTCATTTTGAAGACTTCTCCGTCACTAATGTTACTAATACAACTGAGAATAAAGAACTAAAGGTATGAAACACGGTGAGTTTTATTCTCAGATTCCTTGTATCTATAACCCTCAGATTTCTATTGTTCGTTTAAATCCTGTTTGGATTTTTGAATTTTCAGTTAGTTTGTTTTTGGACCTAAACTTTAAAATATTATGTTTTCGTTACATTACTTTTAGATATTCTATTTAGTCCCTAGAAACTATTCTAGTCCTTGCCATTAATAATTCATTAGTCATTTTTAAAAAATTACTTCATTTCGAAATCCAAAATTGAACCTACTTGTGGCCAATGCACCTATCCACCACAGAAATCAGTCAACTGGTAAATAAGTAAGAGATATACCTATTTTAGGTTTCTGTTAAAAATTTATAAAAAAAACTAACATTCACACTTGAAATGATATTTGAGGCAAAAATTTAGGGATTTAAATAGTATATTTGAATGTCTAGGAACAAATTCAGGTTTGAAGTTGGATTTAAACCTTTATTATATTGTGCACAAAAATTTACTGTAAATTCAGGAACTTTTATTATTACCATAATTTTTTTTTTTTTTTTTTTTTTTTGGAGTTTGCAACCAGATTCGTGTTGAGGTGTCCGGAGCCAAAACTCGAGCAATTTTCAACAATGTGTTTGACAAAATGGTTGCTGAAGCCCAGCCTATTCCAGGTTTTAGAAGAGTGAAAGGAGGTAATATCCAAAGGCATTGTTTCTTCTTTGAGGTGCTCATTGTCTTCATTTTCATTTTCACAAAACCATCATATAAATGTTGTTGGCGAGTTGTTGTAAACAAGCACGATTAAGGTTATGGGTGATTGTGTTGTCTTCATCTTAGAGAGAGAGAAATGTTACTGTACGACCCCTTAACAATCAGAAAACTGCGTCCTTTAATTTGTTTCTCACACTGTTCTCTTTTTTCTTTTCCTTTCCCATTCATTTCATTGGACTTGACAATGCTGCTCTTCATTGGATGTCAGGAAAGACGCCAAACGTAAGTTTTCTTTCCTTTCAATCTCTTGGTTTTCAGGAAGTAACTACTGACGATCTTAATAGGGGAGACAGCTGAAGTAGAATCGCTGATAAGTTCATCATTTGTTCTCAACAGATACCCCGAGACATTCTATTAGAGATACTGGGACCTTCTAAGGTGTACAAACAAGTTATTAAGGAAGTTATCAACTCTACCGTTGCTGCATATGTGGAAAAGGTATGATATAATTGGTGTTTTCATATTCTGATTTTGAGCTGGGATTTATATAATCTTCATTAATCCGAATCTATTATATGATTTAATATTAAATTTATATTCACCCATTAACTTAAGTTTTTGGGTCAATCGGTGATTTAACATGGTATCAGTGTAAGTGGTCTACGAGGCCCCAACTAATATTGATTTCCACTTGTTGGATTTTCTACATTTTTCAAACCTACAAATGAGCATGAGTGTTATATGATATAATATTAAATTTACATTCATCAATTAGTTTAAGTTTTTGGGTCCATTGGTGATTTAACATAGTATCAGAGACTAGAGGGTAGGTGGTCTAGGAGGTCCTGCAATGTTATTTCCTCCTCAATTAATACTGATTTCCACTTATTGGATCCACATATTTCAAGCCTACAAATGAGTGGAAGTGTTAAATGATATAATATTAAATTTACCTTTACCTATCAATTTAAACTTTTGGGTCAATTGGTGATTTAACAGAAACCGTTTGCATGTTTTGCTCTAGCCTAAATGATGGATAAACTCAGGGTTGGAAATTGTTTTAGCATATAGAGTGGAACTCCTGCAATCTACAGTGAATAGTGAAAATGCTTTTACTTCCTGGTTGATATTTTCTACACAGAGATATAAATATAAATGGATGGATAGCAAATAGGAGAAGACCTCAAAGACCTCATAAAAAATATGGTCAGAATTCATAATAGTCTTGTCCAAATGGTCAGATTGATTATCTTGATCCATGGTAGACTTCAATCTCAACAATGGAGGTAGTACAAAAGATTTAAAACAATAAAAAGAAAAAAAGAAAAAAAAGAAAAAAAAAAAAACCTCTTCTCTTTTCTATTGTGATTTATTGATTATTATAAGATAGATTTTTATATAGATATAGGAACAGAGAGACCGAAAAGGACATCATAAATCAATGCTACTATATTAACTGAGTAGAGCCATGACTGAAATATAATAAAATAGAATCTGACTTTTTTGATATTCTTCCTATTATAAAATAACTCTGAAATATTCTTCATCTAAGTCGATCAGTAAAATCACTAAGTACTTCACACGTTTAGGAAGTGATTCTGAAATTGATAAAATCACCTAGGAATGAATCTTTCATCACTCAAAAGTAATTTAATATTTAAGCCATGTTTACTACTCCATAATCAAAATTGTTTCCATCATAATGGATTTTCTTTATTATTCATAATTCACATAATTTGTTAACTGATTTTTTGCAAACATATTTAAATCGTCTAACTTTTCATATTACAATTGATTGATTACGTTTATGGGAAAGTAAACGTGGCCTTAATTTTACACTTTTAAATTCAATTTTCATAACATCAAAATTATCAATTGATTGGAACCATGTATTAGAATGGTTTGGTAATGCCAAAAGTTGATTATGACCCTTTAGAATTACTCCCAAACATTCCATAAAAGGATTGCGTGACATACCCTACAAATGGATTAGAAATAACATTTCAGCAGGTTGGGGCATCCATATCTTAGTGTTTTTTGTGTCCTTTTTGCTTTTCTGAAAAATTTTACCGTTGTAGCAGGAAGCTCTAAAAGTGGGTAAAGACTTGAGAATAGAGCAAAGCTATGAGGATCTTGAAGACCAATTTGAACCAGATGAAAAGTTCTTTTTTGATGCTATTATTCAGCTCAAGGAATCAAACTGAACTATTGAACTATTTTAACATACATTCACTCAAATTTAATGCAATTTTGCGAGGAATCTCCAAATTAGGTTGTGCATCATTTGTTTGTTTTGGCAGGGGGCTATCATCAATTCAACTGGGACCTCGAGCCAAGTGTTGGGTTGCTCTTGCAAAACATGTTGCTTTATACTACTATAAATAAATATTTTTCATTTTAGATAAAGTTTAAGAGACTTTAAGAGACTTTTAACGAATGACGCTAATAAATACTGTCTATTCGTGATAGATATTGATAGACATTTTGCTATATTTATAAATAAGTTGGTTCATTTTACTATATTTG

mRNA sequence

AAAAAAAGAAAAAAACAGAAGGAAAAAAAAAAAGCCACAACGGCATCGTATTTGGACTCGGATAAGTCTCTACTCTGAGAACCGGAGAAAGAAACTTCAAACTGAAGCACTGAGCCGCGCTTGGAAAAATGGTGTCCGCCACCGCCACCGCCACCGCAACCGCAACTGCAACGGTAACCAACATTGCTTCAGAATTCCGGCGGCCAATATTCACCAAAGTTCCTGTTAAGGGCTATTGCCGCAATGCCCTGGTTTGTCTAAACTTTGGAGGTGTTGAATTTGATAATGTACAAGATGGGTTGTGTAGGAGGTCGTCATTTTCTTATAGTCCCCATAAAATGGGTTCCAGATTTTTGTCCAAACCGACGTCCGTAGCTAGTTCAGGTTTCGAGGCAGCCATCACAGATTACAAAGGCAATGCAATAACGTTGAAAAATGCTAAAGTAGTTGTAGAATCTGAAGATGAAAACCAGATACAAGCTATTTATCATAAGCAGACATCAGCTTACTTTACTCCAAACCTCACCTGCACAAGTGTGTCTTTTCCAAGTCAAATAAGATACGGTCACAGAAAAATTTCTCTGAGTAAAAATAACAGATATCTTCCAGCTGCTTGTGCTGTGTTATCAGAAGATGTGAGTGTTTCTTCTTCTCATTTTGAAGACTTCTCCGTCACTAATGTTACTAATACAACTGAGAATAAAGAACTAAAGATTCGTGTTGAGGTGTCCGGAGCCAAAACTCGAGCAATTTTCAACAATGTGTTTGACAAAATGGTTGCTGAAGCCCAGCCTATTCCAGGTTTTAGAAGAGTGAAAGGAGGTAATATCCAAAGGCATTGTTTCTTCTTTGAGATACCCCGAGACATTCTATTAGAGATACTGGGACCTTCTAAGGTGTACAAACAAGTTATTAAGGAAGTTATCAACTCTACCGTTGCTGCATATGTGGAAAAGGAAGCTCTAAAAGTGGGTAAAGACTTGAGAATAGAGCAAAGCTATGAGGATCTTGAAGACCAATTTGAACCAGATGAAAAGTTCTTTTTTGATGCTATTATTCAGCTCAAGGAATCAAACTGAACTATTGAACTATTTTAACATACATTCACTCAAATTTAATGCAATTTTGCGAGGAATCTCCAAATTAGGTTGTGCATCATTTGTTTGTTTTGGCAGGGGGCTATCATCAATTCAACTGGGACCTCGAGCCAAGTGTTGGGTTGCTCTTGCAAAACATGTTGCTTTATACTACTATAAATAAATATTTTTCATTTTAGATAAAGTTTAAGAGACTTTAAGAGACTTTTAACGAATGACGCTAATAAATACTGTCTATTCGTGATAGATATTGATAGACATTTTGCTATATTTATAAATAAGTTGGTTCATTTTACTATATTTG

Coding sequence (CDS)

ATGGTGTCCGCCACCGCCACCGCCACCGCAACCGCAACTGCAACGGTAACCAACATTGCTTCAGAATTCCGGCGGCCAATATTCACCAAAGTTCCTGTTAAGGGCTATTGCCGCAATGCCCTGGTTTGTCTAAACTTTGGAGGTGTTGAATTTGATAATGTACAAGATGGGTTGTGTAGGAGGTCGTCATTTTCTTATAGTCCCCATAAAATGGGTTCCAGATTTTTGTCCAAACCGACGTCCGTAGCTAGTTCAGGTTTCGAGGCAGCCATCACAGATTACAAAGGCAATGCAATAACGTTGAAAAATGCTAAAGTAGTTGTAGAATCTGAAGATGAAAACCAGATACAAGCTATTTATCATAAGCAGACATCAGCTTACTTTACTCCAAACCTCACCTGCACAAGTGTGTCTTTTCCAAGTCAAATAAGATACGGTCACAGAAAAATTTCTCTGAGTAAAAATAACAGATATCTTCCAGCTGCTTGTGCTGTGTTATCAGAAGATGTGAGTGTTTCTTCTTCTCATTTTGAAGACTTCTCCGTCACTAATGTTACTAATACAACTGAGAATAAAGAACTAAAGATTCGTGTTGAGGTGTCCGGAGCCAAAACTCGAGCAATTTTCAACAATGTGTTTGACAAAATGGTTGCTGAAGCCCAGCCTATTCCAGGTTTTAGAAGAGTGAAAGGAGGTAATATCCAAAGGCATTGTTTCTTCTTTGAGATACCCCGAGACATTCTATTAGAGATACTGGGACCTTCTAAGGTGTACAAACAAGTTATTAAGGAAGTTATCAACTCTACCGTTGCTGCATATGTGGAAAAGGAAGCTCTAAAAGTGGGTAAAGACTTGAGAATAGAGCAAAGCTATGAGGATCTTGAAGACCAATTTGAACCAGATGAAAAGTTCTTTTTTGATGCTATTATTCAGCTCAAGGAATCAAACTGA

Protein sequence

MVSATATATATATATVTNIASEFRRPIFTKVPVKGYCRNALVCLNFGGVEFDNVQDGLCRRSSFSYSPHKMGSRFLSKPTSVASSGFEAAITDYKGNAITLKNAKVVVESEDENQIQAIYHKQTSAYFTPNLTCTSVSFPSQIRYGHRKISLSKNNRYLPAACAVLSEDVSVSSSHFEDFSVTNVTNTTENKELKIRVEVSGAKTRAIFNNVFDKMVAEAQPIPGFRRVKGGNIQRHCFFFEIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKEALKVGKDLRIEQSYEDLEDQFEPDEKFFFDAIIQLKESN

Homology

[Close]

BLAST of CmUC06G109190.1 vs. NCBI nr
Match: XP_008460017.1 (PREDICTED: trigger factor-like isoform X2 [Cucumis melo])

HSP 1 Score: 345.5 bits (885), Expect = 4.8e-91
Identity = 180/200 (90.00%), Postives = 187/200 (93.50%), Query Frame = 0


Query: 117 QAIYHKQTSAYFTPNLTCTSVSFPSQIRYGHRKISLSKNNRYLPAACAVLSEDVSVSSSH 176
           +A+YHKQT+ YFTPNLTCTSVSFPSQI+YG  KISLSKNNRYLPAACAVLSE+ SVSSS 
Sbjct: 15  KAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAACAVLSENASVSSSQ 74

Query: 177 FEDFSVTNVTNTTENKELKIRVEVSGAKTRAIFNNVFDKMVAEAQPIPGFRRVKGGNIQR 236
           FEDFSVTNVTNTTENKELKIRVEVSG KTRAIFN VFD+MVAEAQPIPGFRRVKGGNIQR
Sbjct: 75  FEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQPIPGFRRVKGGNIQR 134

Query: 237 HCFFFEIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKEALKVGKDLRIEQSYEDLED 296
                 IPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKEALKVGKDLRI+QSYEDLED
Sbjct: 135 KT--PNIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKEALKVGKDLRIDQSYEDLED 194

Query: 297 QFEPDEKFFFDAIIQLKESN 317
           QFEPDEKFFFDAIIQLKESN
Sbjct: 195 QFEPDEKFFFDAIIQLKESN 212

[Close]

BLAST of CmUC06G109190.1 vs. NCBI nr
Match: KAA0039923.1 (trigger factor-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 344.7 bits (883), Expect = 8.2e-91
Identity = 181/201 (90.05%), Postives = 188/201 (93.53%), Query Frame = 0


Query: 117 QAIYHKQTSAYFTPNLTCTSVSFPSQIRYGHRKISLSKNNRYLPAACAVLSEDVSVSSSH 176
           +A+YHKQT+ YFTPNLTCTSVSFPSQI+YG  KISLSKNNRYLPAACAVLSE+ SVSSS 
Sbjct: 15  KAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAACAVLSENASVSSSQ 74

Query: 177 FEDFSVTNVTNTTENKELKIRVEVSGAKTRAIFNNVFDKMVAEAQPIPGFRRVKGGNIQR 236
           FEDFSVTNVTNTTENKELKIRVEVSG KTRAIFN VFD+MVAEAQPIPGFRRVKGGNIQR
Sbjct: 75  FEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQPIPGFRRVKGGNIQR 134

Query: 237 HCFFFEIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEK-EALKVGKDLRIEQSYEDLE 296
           H     IPRDILLEILGPSKVYKQVIKEVINSTVAAYVEK EALKVGKDLRI+QSYEDLE
Sbjct: 135 H-----IPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKQEALKVGKDLRIDQSYEDLE 194

Query: 297 DQFEPDEKFFFDAIIQLKESN 317
           DQFEPDEKFFFDAIIQLKESN
Sbjct: 195 DQFEPDEKFFFDAIIQLKESN 210

[Close]

BLAST of CmUC06G109190.1 vs. NCBI nr
Match: XP_008460016.1 (PREDICTED: trigger factor-like isoform X1 [Cucumis melo])

HSP 1 Score: 340.9 bits (873), Expect = 1.2e-89
Identity = 180/201 (89.55%), Postives = 187/201 (93.03%), Query Frame = 0


Query: 117 QAIYHKQTSAYFTPNLTCTSVSFPSQIRYGHRKISLSKNNRYLPAACAVLSEDVSVSSSH 176
           +A+YHKQT+ YFTPNLTCTSVSFPSQI+YG  KISLSKNNRYLPAACAVLSE+ SVSSS 
Sbjct: 15  KAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAACAVLSENASVSSSQ 74

Query: 177 FEDFSVTNVTNTTENKELKIRVEVSGAKTRAIFNNVFDKMVAEAQPIPGFRRVKGGNIQR 236
           FEDFSVTNVTNTTENKELKIRVEVSG KTRAIFN VFD+MVAEAQPIPGFRRVKGGNIQR
Sbjct: 75  FEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQPIPGFRRVKGGNIQR 134

Query: 237 HCFFFEIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEK-EALKVGKDLRIEQSYEDLE 296
                 IPRDILLEILGPSKVYKQVIKEVINSTVAAYVEK EALKVGKDLRI+QSYEDLE
Sbjct: 135 KT--PNIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKQEALKVGKDLRIDQSYEDLE 194

Query: 297 DQFEPDEKFFFDAIIQLKESN 317
           DQFEPDEKFFFDAIIQLKESN
Sbjct: 195 DQFEPDEKFFFDAIIQLKESN 213

[Close]

BLAST of CmUC06G109190.1 vs. NCBI nr
Match: XP_008460019.1 (PREDICTED: trigger factor-like isoform X4 [Cucumis melo])

HSP 1 Score: 337.4 bits (864), Expect = 1.3e-88
Identity = 176/200 (88.00%), Postives = 183/200 (91.50%), Query Frame = 0


Query: 117 QAIYHKQTSAYFTPNLTCTSVSFPSQIRYGHRKISLSKNNRYLPAACAVLSEDVSVSSSH 176
           +A+YHKQT+ YFTPNLTCTSVSFPSQI+YG  KISLSKNNRYLPAACAVLSE+ SVSSS 
Sbjct: 15  KAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAACAVLSENASVSSSQ 74

Query: 177 FEDFSVTNVTNTTENKELKIRVEVSGAKTRAIFNNVFDKMVAEAQPIPGFRRVKGGNIQR 236
           FEDFSVTNVTNTTENKELKIRVEVSG KTRAIFN VFD+MVAEAQPIPGFRRVKGG    
Sbjct: 75  FEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQPIPGFRRVKGGKTP- 134

Query: 237 HCFFFEIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKEALKVGKDLRIEQSYEDLED 296
                 IPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKEALKVGKDLRI+QSYEDLED
Sbjct: 135 -----NIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKEALKVGKDLRIDQSYEDLED 194

Query: 297 QFEPDEKFFFDAIIQLKESN 317
           QFEPDEKFFFDAIIQLKESN
Sbjct: 195 QFEPDEKFFFDAIIQLKESN 208

[Close]

BLAST of CmUC06G109190.1 vs. NCBI nr
Match: XP_004140596.1 (uncharacterized protein LOC101211587 isoform X2 [Cucumis sativus] >KGN46334.1 hypothetical protein Csa_005501 [Cucumis sativus])

HSP 1 Score: 336.3 bits (861), Expect = 2.9e-88
Identity = 177/200 (88.50%), Postives = 182/200 (91.00%), Query Frame = 0


Query: 117 QAIYHKQTSAYFTPNLTCTSVSFPSQIRYGHRKISLSKNNRYLPAACAVLSEDVSVSSSH 176
           +AIYHKQT+ YFTPNLTC  VSFPSQIRYG RKISLSKNNRYLPAACAVLSE+VSVSSS 
Sbjct: 15  KAIYHKQTTDYFTPNLTCIGVSFPSQIRYGSRKISLSKNNRYLPAACAVLSENVSVSSSQ 74

Query: 177 FEDFSVTNVTNTTENKELKIRVEVSGAKTRAIFNNVFDKMVAEAQPIPGFRRVKGGNIQR 236
           FEDFSVTNVTNT ENKELKIRVEVSGAKTRAIFN VFD+MVAEAQPIPGFRRVKGG    
Sbjct: 75  FEDFSVTNVTNTKENKELKIRVEVSGAKTRAIFNVVFDRMVAEAQPIPGFRRVKGGKTP- 134

Query: 237 HCFFFEIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKEALKVGKDLRIEQSYEDLED 296
                 IPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKEALKVGKDLRI+QSYEDLED
Sbjct: 135 -----NIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKEALKVGKDLRIDQSYEDLED 194

Query: 297 QFEPDEKFFFDAIIQLKESN 317
           QFEPDE FFFDAIIQLKESN
Sbjct: 195 QFEPDENFFFDAIIQLKESN 208

[Close]

BLAST of CmUC06G109190.1 vs. ExPASy Swiss-Prot
Match: Q7NDP0 (Trigger factor OS=Gloeobacter violaceus (strain ATCC 29082 / PCC 7421) OX=251221 GN=tig PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 5.5e-05
Identity = 29/121 (23.97%), Postives = 64/121 (52.89%), Query Frame = 0


Query: 193 ELKIRVEVSGAKTRAIFNNVFDKMVAEAQPIPGFRRVKGGNIQRHCFFFEIPRDILLEIL 252
           ++ + VEV G K++  +  +    +  A+ IPGFR  K             PR ++L+  
Sbjct: 12  QMGLNVEVEGEKSKQAYEKLVRDTMRTAR-IPGFRPGKA------------PRQLVLQFY 71

Query: 253 GPSKVYKQVIKEVINSTVAAYVEKEALKVGKDLRIEQSYEDLEDQFEPDEKFFFDAIIQL 312
           G  ++  Q ++ +I+S++   +E+E++    +L++  S+E+L  +++P E   F A + +
Sbjct: 72  GKERLRAQALENLIDSSLKEAIEQESIASLGNLQLRDSFEELLGRYQPGEPLSFKAAVDV 119

Query: 313 K 314
           +
Sbjct: 132 Q 119

[Close]

BLAST of CmUC06G109190.1 vs. ExPASy TrEMBL
Match: A0A1S3CC05 (trigger factor-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498958 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 2.3e-91
Identity = 180/200 (90.00%), Postives = 187/200 (93.50%), Query Frame = 0


Query: 117 QAIYHKQTSAYFTPNLTCTSVSFPSQIRYGHRKISLSKNNRYLPAACAVLSEDVSVSSSH 176
           +A+YHKQT+ YFTPNLTCTSVSFPSQI+YG  KISLSKNNRYLPAACAVLSE+ SVSSS 
Sbjct: 15  KAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAACAVLSENASVSSSQ 74

Query: 177 FEDFSVTNVTNTTENKELKIRVEVSGAKTRAIFNNVFDKMVAEAQPIPGFRRVKGGNIQR 236
           FEDFSVTNVTNTTENKELKIRVEVSG KTRAIFN VFD+MVAEAQPIPGFRRVKGGNIQR
Sbjct: 75  FEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQPIPGFRRVKGGNIQR 134

Query: 237 HCFFFEIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKEALKVGKDLRIEQSYEDLED 296
                 IPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKEALKVGKDLRI+QSYEDLED
Sbjct: 135 KT--PNIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKEALKVGKDLRIDQSYEDLED 194

Query: 297 QFEPDEKFFFDAIIQLKESN 317
           QFEPDEKFFFDAIIQLKESN
Sbjct: 195 QFEPDEKFFFDAIIQLKESN 212

[Close]

BLAST of CmUC06G109190.1 vs. ExPASy TrEMBL
Match: A0A5A7TA41 (Trigger factor-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G002030 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 4.0e-91
Identity = 181/201 (90.05%), Postives = 188/201 (93.53%), Query Frame = 0


Query: 117 QAIYHKQTSAYFTPNLTCTSVSFPSQIRYGHRKISLSKNNRYLPAACAVLSEDVSVSSSH 176
           +A+YHKQT+ YFTPNLTCTSVSFPSQI+YG  KISLSKNNRYLPAACAVLSE+ SVSSS 
Sbjct: 15  KAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAACAVLSENASVSSSQ 74

Query: 177 FEDFSVTNVTNTTENKELKIRVEVSGAKTRAIFNNVFDKMVAEAQPIPGFRRVKGGNIQR 236
           FEDFSVTNVTNTTENKELKIRVEVSG KTRAIFN VFD+MVAEAQPIPGFRRVKGGNIQR
Sbjct: 75  FEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQPIPGFRRVKGGNIQR 134

Query: 237 HCFFFEIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEK-EALKVGKDLRIEQSYEDLE 296
           H     IPRDILLEILGPSKVYKQVIKEVINSTVAAYVEK EALKVGKDLRI+QSYEDLE
Sbjct: 135 H-----IPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKQEALKVGKDLRIDQSYEDLE 194

Query: 297 DQFEPDEKFFFDAIIQLKESN 317
           DQFEPDEKFFFDAIIQLKESN
Sbjct: 195 DQFEPDEKFFFDAIIQLKESN 210

[Close]

BLAST of CmUC06G109190.1 vs. ExPASy TrEMBL
Match: A0A1S3CBJ8 (trigger factor-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498958 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 5.7e-90
Identity = 180/201 (89.55%), Postives = 187/201 (93.03%), Query Frame = 0


Query: 117 QAIYHKQTSAYFTPNLTCTSVSFPSQIRYGHRKISLSKNNRYLPAACAVLSEDVSVSSSH 176
           +A+YHKQT+ YFTPNLTCTSVSFPSQI+YG  KISLSKNNRYLPAACAVLSE+ SVSSS 
Sbjct: 15  KAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAACAVLSENASVSSSQ 74

Query: 177 FEDFSVTNVTNTTENKELKIRVEVSGAKTRAIFNNVFDKMVAEAQPIPGFRRVKGGNIQR 236
           FEDFSVTNVTNTTENKELKIRVEVSG KTRAIFN VFD+MVAEAQPIPGFRRVKGGNIQR
Sbjct: 75  FEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQPIPGFRRVKGGNIQR 134

Query: 237 HCFFFEIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEK-EALKVGKDLRIEQSYEDLE 296
                 IPRDILLEILGPSKVYKQVIKEVINSTVAAYVEK EALKVGKDLRI+QSYEDLE
Sbjct: 135 KT--PNIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKQEALKVGKDLRIDQSYEDLE 194

Query: 297 DQFEPDEKFFFDAIIQLKESN 317
           DQFEPDEKFFFDAIIQLKESN
Sbjct: 195 DQFEPDEKFFFDAIIQLKESN 213

[Close]

BLAST of CmUC06G109190.1 vs. ExPASy TrEMBL
Match: A0A1S3CB34 (trigger factor-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC103498958 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 6.3e-89
Identity = 176/200 (88.00%), Postives = 183/200 (91.50%), Query Frame = 0


Query: 117 QAIYHKQTSAYFTPNLTCTSVSFPSQIRYGHRKISLSKNNRYLPAACAVLSEDVSVSSSH 176
           +A+YHKQT+ YFTPNLTCTSVSFPSQI+YG  KISLSKNNRYLPAACAVLSE+ SVSSS 
Sbjct: 15  KAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAACAVLSENASVSSSQ 74

Query: 177 FEDFSVTNVTNTTENKELKIRVEVSGAKTRAIFNNVFDKMVAEAQPIPGFRRVKGGNIQR 236
           FEDFSVTNVTNTTENKELKIRVEVSG KTRAIFN VFD+MVAEAQPIPGFRRVKGG    
Sbjct: 75  FEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQPIPGFRRVKGGKTP- 134

Query: 237 HCFFFEIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKEALKVGKDLRIEQSYEDLED 296
                 IPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKEALKVGKDLRI+QSYEDLED
Sbjct: 135 -----NIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKEALKVGKDLRIDQSYEDLED 194

Query: 297 QFEPDEKFFFDAIIQLKESN 317
           QFEPDEKFFFDAIIQLKESN
Sbjct: 195 QFEPDEKFFFDAIIQLKESN 208

[Close]

BLAST of CmUC06G109190.1 vs. ExPASy TrEMBL
Match: A0A0A0KBW0 (Trigger_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G086150 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 1.4e-88
Identity = 177/200 (88.50%), Postives = 182/200 (91.00%), Query Frame = 0


Query: 117 QAIYHKQTSAYFTPNLTCTSVSFPSQIRYGHRKISLSKNNRYLPAACAVLSEDVSVSSSH 176
           +AIYHKQT+ YFTPNLTC  VSFPSQIRYG RKISLSKNNRYLPAACAVLSE+VSVSSS 
Sbjct: 15  KAIYHKQTTDYFTPNLTCIGVSFPSQIRYGSRKISLSKNNRYLPAACAVLSENVSVSSSQ 74

Query: 177 FEDFSVTNVTNTTENKELKIRVEVSGAKTRAIFNNVFDKMVAEAQPIPGFRRVKGGNIQR 236
           FEDFSVTNVTNT ENKELKIRVEVSGAKTRAIFN VFD+MVAEAQPIPGFRRVKGG    
Sbjct: 75  FEDFSVTNVTNTKENKELKIRVEVSGAKTRAIFNVVFDRMVAEAQPIPGFRRVKGGKTP- 134

Query: 237 HCFFFEIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKEALKVGKDLRIEQSYEDLED 296
                 IPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKEALKVGKDLRI+QSYEDLED
Sbjct: 135 -----NIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKEALKVGKDLRIDQSYEDLED 194

Query: 297 QFEPDEKFFFDAIIQLKESN 317
           QFEPDE FFFDAIIQLKESN
Sbjct: 195 QFEPDENFFFDAIIQLKESN 208

[Close]

BLAST of CmUC06G109190.1 vs. TAIR 10
Match: AT2G30695.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 253 Blast hits to 253 proteins in 72 species: Archae - 0; Bacteria - 138; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). )

HSP 1 Score: 162.9 bits (411), Expect = 4.1e-40
Identity = 93/169 (55.03%), Postives = 117/169 (69.23%), Query Frame = 0


Query: 148 RKISLSKNNRYLPAACAVLSEDVSVSSSHFEDFSVTNVTNTTENKELKIRVEVSGAKTRA 207
           +K+     NR   A CA  S DV  SS   E   +T V   T N E+K+ V+VSG KT+ 
Sbjct: 40  QKLCTRATNRQFVAVCAAPS-DVETSSKD-ESVLITKVETETSN-EVKVHVQVSGEKTQT 99

Query: 208 IFNNVFDKMVAEAQPIPGFRRVKGGNIQRHCFFFEIPRDILLEILGPSKVYKQVIKEVIN 267
           +FN+VF+KMVA AQPIPGFRRVKGG          IP+D+LLEILG SKVYKQVIK++IN
Sbjct: 100 VFNHVFEKMVAAAQPIPGFRRVKGGKTP------NIPKDVLLEILGYSKVYKQVIKKLIN 159

Query: 268 STVAAYVEKEALKVGKDLRIEQSYEDLEDQFEPDEKFFFDAIIQLKESN 317
           S +  YV++E LKVGK+L + QSYEDLE+ FEP E F FDA I+L+E++
Sbjct: 160 SAIEDYVKQEDLKVGKELTVVQSYEDLEETFEPGESFSFDATIKLQEAS 199

[Close]

BLAST of CmUC06G109190.1 vs. TAIR 10
Match: AT2G30695.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 162.9 bits (411), Expect = 4.1e-40
Identity = 93/169 (55.03%), Postives = 117/169 (69.23%), Query Frame = 0


Query: 148 RKISLSKNNRYLPAACAVLSEDVSVSSSHFEDFSVTNVTNTTENKELKIRVEVSGAKTRA 207
           +K+     NR   A CA  S DV  SS   E   +T V   T N E+K+ V+VSG KT+ 
Sbjct: 40  QKLCTRATNRQFVAVCAAPS-DVETSSKD-ESVLITKVETETSN-EVKVHVQVSGEKTQT 99

Query: 208 IFNNVFDKMVAEAQPIPGFRRVKGGNIQRHCFFFEIPRDILLEILGPSKVYKQVIKEVIN 267
           +FN+VF+KMVA AQPIPGFRRVKGG          IP+D+LLEILG SKVYKQVIK++IN
Sbjct: 100 VFNHVFEKMVAAAQPIPGFRRVKGGKTP------NIPKDVLLEILGYSKVYKQVIKKLIN 159

Query: 268 STVAAYVEKEALKVGKDLRIEQSYEDLEDQFEPDEKFFFDAIIQLKESN 317
           S +  YV++E LKVGK+L + QSYEDLE+ FEP E F FDA I+L+E++
Sbjct: 160 SAIEDYVKQEDLKVGKELTVVQSYEDLEETFEPGESFSFDATIKLQEAS 199

The following BLAST results are available for this feature:

BLAST of CmUC06G109190.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460017.1	4.8e-91	90.00	PREDICTED: trigger factor-like isoform X2 [Cucumis melo]	[more]
KAA0039923.1	8.2e-91	90.05	trigger factor-like isoform X1 [Cucumis melo var. makuwa]	[more]
XP_008460016.1	1.2e-89	89.55	PREDICTED: trigger factor-like isoform X1 [Cucumis melo]	[more]
XP_008460019.1	1.3e-88	88.00	PREDICTED: trigger factor-like isoform X4 [Cucumis melo]	[more]
XP_004140596.1	2.9e-88	88.50	uncharacterized protein LOC101211587 isoform X2 [Cucumis sativus] >KGN46334.1 hy...	[more]

BLAST of CmUC06G109190.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7NDP0	5.5e-05	23.97	Trigger factor OS=Gloeobacter violaceus (strain ATCC 29082 / PCC 7421) OX=251221...	[more]

BLAST of CmUC06G109190.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CC05	2.3e-91	90.00	trigger factor-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498958 PE=4 SV=1	[more]
A0A5A7TA41	4.0e-91	90.05	Trigger factor-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A1S3CBJ8	5.7e-90	89.55	trigger factor-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498958 PE=4 SV=1	[more]
A0A1S3CB34	6.3e-89	88.00	trigger factor-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC103498958 PE=4 SV=1	[more]
A0A0A0KBW0	1.4e-88	88.50	Trigger_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G086150 P...	[more]

BLAST of CmUC06G109190.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30695.1	4.1e-40	55.03	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein ...	[more]
AT2G30695.2	4.1e-40	55.03	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein ...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008881	Trigger factor, ribosome-binding, bacterial	PFAM	PF05697	Trigger_N	coord: 186..309 e-value: 3.7E-7 score: 30.5
IPR036611	Trigger factor ribosome-binding domain superfamily	GENE3D	3.30.70.1050		coord: 184..313 e-value: 1.2E-15 score: 59.8
IPR036611	Trigger factor ribosome-binding domain superfamily	SUPERFAMILY	102735	Trigger factor ribosome-binding domain	coord: 187..311
IPR005215	Trigger factor	PANTHER	PTHR30560	TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE	coord: 115..315
None	No IPR available	PANTHER	PTHR30560:SF5	OS09G0515400 PROTEIN	coord: 115..315

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmUC06G109190	CmUC06G109190	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC06G109190.1-exon	CmUC06G109190.1-exon-CmU531Chr06:1004864..1005308	exon
CmUC06G109190.1-exon	CmUC06G109190.1-exon-CmU531Chr06:1006892..1006993	exon
CmUC06G109190.1-exon	CmUC06G109190.1-exon-CmU531Chr06:1007377..1007517	exon
CmUC06G109190.1-exon	CmUC06G109190.1-exon-CmU531Chr06:1008079..1008161	exon
CmUC06G109190.1-exon	CmUC06G109190.1-exon-CmU531Chr06:1008259..1008302	exon
CmUC06G109190.1-exon	CmUC06G109190.1-exon-CmU531Chr06:1010382..1010488	exon
CmUC06G109190.1-exon	CmUC06G109190.1-exon-CmU531Chr06:1012586..1012680	exon
CmUC06G109190.1-exon	CmUC06G109190.1-exon-CmU531Chr06:1013337..1013410	exon
CmUC06G109190.1-exon	CmUC06G109190.1-exon-CmU531Chr06:1013573..1013664	exon
CmUC06G109190.1-exon	CmUC06G109190.1-exon-CmU531Chr06:1013813..1014030	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC06G109190.1-three_prime_utr	CmUC06G109190.1-three_prime_utr-CmU531Chr06:1004864..1005185	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC06G109190.1-cds	CmUC06G109190.1-cds-CmU531Chr06:1005186..1005308	CDS
CmUC06G109190.1-cds	CmUC06G109190.1-cds-CmU531Chr06:1006892..1006993	CDS
CmUC06G109190.1-cds	CmUC06G109190.1-cds-CmU531Chr06:1007377..1007517	CDS
CmUC06G109190.1-cds	CmUC06G109190.1-cds-CmU531Chr06:1008079..1008161	CDS
CmUC06G109190.1-cds	CmUC06G109190.1-cds-CmU531Chr06:1008259..1008302	CDS
CmUC06G109190.1-cds	CmUC06G109190.1-cds-CmU531Chr06:1010382..1010488	CDS
CmUC06G109190.1-cds	CmUC06G109190.1-cds-CmU531Chr06:1012586..1012680	CDS
CmUC06G109190.1-cds	CmUC06G109190.1-cds-CmU531Chr06:1013337..1013410	CDS
CmUC06G109190.1-cds	CmUC06G109190.1-cds-CmU531Chr06:1013573..1013664	CDS
CmUC06G109190.1-cds	CmUC06G109190.1-cds-CmU531Chr06:1013813..1013902	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC06G109190.1-five_prime_utr	CmUC06G109190.1-five_prime_utr-CmU531Chr06:1013903..1014030	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmUC06G109190.1	CmUC06G109190.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0015031	protein transport
biological_process	GO:0061077	chaperone-mediated protein folding
biological_process	GO:0051083	'de novo' cotranslational protein folding
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
biological_process	GO:0043335	protein unfolding
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity
molecular_function	GO:0044183	protein folding chaperone
molecular_function	GO:0043022	ribosome binding