CmUC05G105050.1 (mRNA) Watermelon (USVL531) v1

Overview


Name	CmUC05G105050.1
Type	mRNA
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	BHLH domain-containing protein
Location	CmU531Chr05: 33537221 .. 33540206 (-)
Sequence length	934
RNA-Seq Expression	CmUC05G105050.1
Synteny	CmUC05G105050.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACACAATAGAGAAATTAAAAACAGTCCATTAAAAAAATTACCTAATATAGGAGAGAAAAAAAAAAGAGATTATTGTGTGAAGGTTGTGAAGCTCTGAGTAATGGCGAACAACCCTATCCGTTGTGTACCATCTTCACAAACCGATCAAAAACTCATAGAGACGAATCGAAGAAAGGAAATGAAAGAGCTTCTCTCAACACTCAATTCCCTCGTCCCCCATGAAAGTTCAAAGGTTTTTTTTTTTTTTTTTTTTTTTTTCTCTCTTTTTAATTTATATATATGACTATATCTTATTATATTATTTTTAGTAAAAATTTTGAATAATGTTTGTGTGCAGGAAGCAAGAACAGTGGTGGATGAGTTAGAAGACGCCACGAATTACATAAAAGAATTGCAGAACCACATTGAGAAACTAAAAGAAAAAAAAGAGAAGCTAATGGGGAAAATTAAAATGGTTGAGTTAGAAGATGGAAGAAGAAATAGAAAGAAACATGAAGAAACCAAACCCAACCCCAAATTATTGTTGCAAGTTAAAGCTCATCAACTGGATTCTACACTGCACATCCTTTTGACAACTGGATCTGATTATCACCCTATTCTTCAACAAATCCTTCTCCTCCTCCATGATAATGGAACTGACACCCTCCATGTCAATCAGACAAGAGTCAAACATCGGGTTTTTCACACTATTGTAGCTAAGGTAATTTAGGTCTCGTTTAATAACTATTTTACTTCTAACATTATTTCTACCTTTTATCGTCTCCTGTCTGCCTTCAAAATTCAAACAATTTGCAATAAACAAACTTTGTTATTATATATTTTTTTTTATTAGGAAAAATGGTTTTTAAAAATTTCTTTTTGTTTTTAAAATTTAATTAAGAATTCACAAATTCAAACTTGTGAAAAAACTTTGCAGATTTTTTTTTTTTTTTAAAAAAATGAAACAGCTAAATGATTATTTATTTTCCTTTCAACTTTTTGGTGTCTCACACAAATTAATTATATAAAATGTGTTTAATTCATTTCATAAATAATTATTAAGAGGACAATTTGTTGTTTCATGGTTGAAAATTTGATTTCCCACTAGAAACGTTTCAAAAAAGAGAATGGAAAATGGGGAAAAAAAAAGTCACGTGGGTTATCTTGTTATCTACAAAAATAATTCACGTATGGAAATAAATATAGTTTTGTTTATCGTTTTTTTTTTTTTTTTTTTTTGGACTTTTTCCCTTTCTTTTCTTCTTTTTGAGTTCTTATCCATTAGGTTTCTGAAGCTTACCAGAGAAATGGTAGAAACCACGGAGAGGGAAGGATAAGAGAGTTATTTTTTAAGGTCAAATAATTAACATTTACGTTCTATTTGAAAACTGTTTTAATTTTGTATAATTAACATAAACGTATTTTTTAAAACTAATTTATTGTTTATTCTAAACCTGACTTAAAATTTGAAAATGTTGTAGACAATAAAACAAGTGAACACTTGGATGGAAGTAGTATACTTCATTTTAAAAAATAAGAAACCAGAAAACAAATGGAGTCTTAGTTTTGGAAAACTCTATTGTTTTCTCACAATTTTTTTTTTTAATAGTCTTCATATTTTTTAAGGTAATATTTGAATCCGGTTAAAAAACTATATTTTAAGACTTAGTATGGTAATTAACCATTTAAACTTTTTGTTTTTAGTTTTTGAAAATTAAGCCTTAAACACTTTTTTTACCTCCAAATTTTTTTATTTATTATATAATTTTTATCAATATTTTCAAAAACTATGACAAATTTTGAGACAAAAATTTATTTTTCAAAAAATTATTTTTGTTAATAAAAATTTAGCTAAGAATCTAACTATTTTAAAATTATTATAAAACATTGAGAGAAAATATATACTTAATTTTCAAAAACTTAACATCCAAATTCAAATAGTTATTAAACTAGGTTGAATTAGTTTTCAAATTGTAGATTTAAAAACCATGAAAGTTGTGTTTCCAAGTTCAAATTTCCAAAACCCAAATAATATGTCAAACAACGTCAAAATTTCAATATTGGTTTCATCCATAAATTTCATGCTTACAAACTATATCTATTGATTTTGTTCTCATTTACTATTGGAAAACGTAAGAATTAATTTAACAATTTTCTTTTTTTTTTTGTTTTGTCACGAATCATTTCTTATATTTCTTATTTGGAAATACACATAATAATGCTAATTAACGTTAGGCAAATAACAATTCATACCCCTAAACTTTGGAGGATATATCAATTTAAACCCTAAACTAATAATCATATCAACTTAAACTCCGAACTTTCATAAATGTGTCGATTTTAACCAGAACCTAATAACTGTATTAGTTTAAACCCTAAACTTTCATAAGTGTATCAATTGAAATCCTCCATTATGTTTTATTTGGATACAGTTATGAAAGTTTAGAGTTTAAATTGATATACTTATGAAAGTTTAAGGTTTAAATTGACACATATAATTATTAGTTTGGGGTTTAGATCGATACAAATCTCAAAGTTTAGGATTTAAATTTATATAATCAATTAGTTTGAGAGTTTAAATTGATACAATCTCTAAAGTTTAAGATATAAATTGATATAACATTACAGTGTGGGAGAAAAAAATGATGATAATATATTGCAAATTTAGGTGGATGGAGAAGGAATGGGGCCAGAAGATGGTGAAAGGATTTGTGAGACAGTGAAGAATTTAGTTTCAGAGTACAAAGATGGCGAATGCACTCTTTAATAATATTTCGACCACAACGTTAAACTGCTCGTGAAGATTTATGATGTCTTTTGTCCTTTTTATTTTATTTTATTTTTATTGATAATGCTTCAAATCAAAACATTCAATAGTTTGCATTTATTGTAATGCATTATAACCCTTTGCCATGGTGAACTTCTCAGACAATTATTTGCTTCCTTATATTTATTCATTTAAAGAGGACTTTGCCTTTTCTTTTAGGTCAAATAAGGAGAAACATA

mRNA sequence

CACACAATAGAGAAATTAAAAACAGTCCATTAAAAAAATTACCTAATATAGGAGAGAAAAAAAAAAGAGATTATTGTGTGAAGGTTGTGAAGCTCTGAGTAATGGCGAACAACCCTATCCGTTGTGTACCATCTTCACAAACCGATCAAAAACTCATAGAGACGAATCGAAGAAAGGAAATGAAAGAGCTTCTCTCAACACTCAATTCCCTCGTCCCCCATGAAAGTTCAAAGGAAGCAAGAACAGTGGTGGATGAGTTAGAAGACGCCACGAATTACATAAAAGAATTGCAGAACCACATTGAGAAACTAAAAGAAAAAAAAGAGAAGCTAATGGGGAAAATTAAAATGGTTGAGTTAGAAGATGGAAGAAGAAATAGAAAGAAACATGAAGAAACCAAACCCAACCCCAAATTATTGTTGCAAGTTAAAGCTCATCAACTGGATTCTACACTGCACATCCTTTTGACAACTGGATCTGATTATCACCCTATTCTTCAACAAATCCTTCTCCTCCTCCATGATAATGGAACTGACACCCTCCATGTCAATCAGACAAGAGTCAAACATCGGGTTTTTCACACTATTGTAGCTAAGGTGGATGGAGAAGGAATGGGGCCAGAAGATGGTGAAAGGATTTGTGAGACAGTGAAGAATTTAGTTTCAGAGTACAAAGATGGCGAATGCACTCTTTAATAATATTTCGACCACAACGTTAAACTGCTCGTGAAGATTTATGATGTCTTTTGTCCTTTTTATTTTATTTTATTTTTATTGATAATGCTTCAAATCAAAACATTCAATAGTTTGCATTTATTGTAATGCATTATAACCCTTTGCCATGGTGAACTTCTCAGACAATTATTTGCTTCCTTATATTTATTCATTTAAAGAGGACTTTGCCTTTTCTTTTAGGTCAAATAAGGAGAAACATA

Coding sequence (CDS)

ATGGCGAACAACCCTATCCGTTGTGTACCATCTTCACAAACCGATCAAAAACTCATAGAGACGAATCGAAGAAAGGAAATGAAAGAGCTTCTCTCAACACTCAATTCCCTCGTCCCCCATGAAAGTTCAAAGGAAGCAAGAACAGTGGTGGATGAGTTAGAAGACGCCACGAATTACATAAAAGAATTGCAGAACCACATTGAGAAACTAAAAGAAAAAAAAGAGAAGCTAATGGGGAAAATTAAAATGGTTGAGTTAGAAGATGGAAGAAGAAATAGAAAGAAACATGAAGAAACCAAACCCAACCCCAAATTATTGTTGCAAGTTAAAGCTCATCAACTGGATTCTACACTGCACATCCTTTTGACAACTGGATCTGATTATCACCCTATTCTTCAACAAATCCTTCTCCTCCTCCATGATAATGGAACTGACACCCTCCATGTCAATCAGACAAGAGTCAAACATCGGGTTTTTCACACTATTGTAGCTAAGGTGGATGGAGAAGGAATGGGGCCAGAAGATGGTGAAAGGATTTGTGAGACAGTGAAGAATTTAGTTTCAGAGTACAAAGATGGCGAATGCACTCTTTAA

Protein sequence

MANNPIRCVPSSQTDQKLIETNRRKEMKELLSTLNSLVPHESSKEARTVVDELEDATNYIKELQNHIEKLKEKKEKLMGKIKMVELEDGRRNRKKHEETKPNPKLLLQVKAHQLDSTLHILLTTGSDYHPILQQILLLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEGMGPEDGERICETVKNLVSEYKDGECTL

Homology

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BLAST of CmUC05G105050.1 vs. NCBI nr
Match: XP_008442634.2 (PREDICTED: transcription factor bHLH118-like [Cucumis melo])

HSP 1 Score: 240.4 bits (612), Expect = 1.4e-59
Identity = 129/198 (65.15%), Postives = 159/198 (80.30%), Query Frame = 0


Query: 3   NNPIRCVPSSQTDQKLIETNRRKEMKELLSTLNSLVPHESSKEA-RTVVDELEDATNYIK 62
           +NPIRC P+ Q+D+K +E NRRKEMK L STLNSL+P+ +S+EA RTV D+LEDATNYIK
Sbjct: 2   SNPIRCQPTPQSDRKFVERNRRKEMKSLFSTLNSLLPNHTSREAPRTVPDQLEDATNYIK 61

Query: 63  ELQNHIEKLKEKKEKLMGKIKMVELE--DGRRNRKKHEETKPNPKLLLQVKAHQLDSTLH 122
           ELQ +I+KLKEKKE+LMGK KM E E  +GRR R+   ETK  PKLLLQVKAHQ+ S++ 
Sbjct: 62  ELQKNIQKLKEKKEELMGKNKMEEDEEAEGRRRRRFEHETK--PKLLLQVKAHQIGSSVE 121

Query: 123 ILLTTGSDYHPILQQILLLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEGMGPEDGERI 182
           + LTTGSDYH ILQQ+L LL DNG + L+VNQ+    RVFH I A+VDGEG+GP DGERI
Sbjct: 122 VFLTTGSDYHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVDGEGIGPGDGERI 181

Query: 183 CETVKNLVSEYKDGECTL 198
           C+TVK  VS+YKD +C++
Sbjct: 182 CKTVKKFVSQYKDEQCSV 197

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BLAST of CmUC05G105050.1 vs. NCBI nr
Match: XP_038876951.1 (transcription factor bHLH162-like [Benincasa hispida] >XP_038876952.1 transcription factor bHLH162-like [Benincasa hispida] >XP_038876954.1 transcription factor bHLH162-like [Benincasa hispida] >XP_038876955.1 transcription factor bHLH162-like [Benincasa hispida] >XP_038876956.1 transcription factor bHLH162-like [Benincasa hispida])

HSP 1 Score: 224.6 bits (571), Expect = 7.7e-55
Identity = 128/204 (62.75%), Postives = 154/204 (75.49%), Query Frame = 0


Query: 1   MANNPIRCVPSSQTDQKLIETNRRKEMKELLSTLNSLVPHESSKEARTVVDELEDATNYI 60
           MANNPI C PS     KLIE N R+EMK L STLNSL+P+++S EARTV D+LE+ATNYI
Sbjct: 1   MANNPICCPPS-----KLIERNGRREMKALFSTLNSLLPNQNSGEARTVPDQLEEATNYI 60

Query: 61  KELQNHIEKLKEKKEKL------MGKIKMVELEDGRRNRKKHEETKPNPKLLLQVKAHQL 120
           KELQN+IE+LKEKKEKL       GK KM   ED +R + KHE     P LLLQVKAH++
Sbjct: 61  KELQNNIERLKEKKEKLKQKQKVKGKYKMGVEEDEKRRKCKHE---IEPNLLLQVKAHRV 120

Query: 121 DSTLHILLTTG-SDYHPILQQILLLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEGMGP 180
            S++ + LTTG SDYH ILQQI+ LL  NG   L++NQ+ ++HR FH I A+VDGEGM P
Sbjct: 121 GSSVEVFLTTGISDYHFILQQIIRLLQHNGAHILNLNQSILQHRAFHKITAQVDGEGMVP 180

Query: 181 EDGERICETVKNLVSEYKDGECTL 198
           EDGERICETVKN VS+YKDG+C+L
Sbjct: 181 EDGERICETVKNFVSQYKDGQCSL 196

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BLAST of CmUC05G105050.1 vs. NCBI nr
Match: XP_004146605.1 (transcription factor bHLH162 isoform X1 [Cucumis sativus] >KGN64684.1 hypothetical protein Csa_013539 [Cucumis sativus])

HSP 1 Score: 224.2 bits (570), Expect = 1.0e-54
Identity = 124/197 (62.94%), Postives = 152/197 (77.16%), Query Frame = 0


Query: 3   NNPIRCVPSSQTDQKLIETNRRKEMKELLSTLNSLVPHESSKEA-RTVVDELEDATNYIK 62
           +NPIRC P+ Q+++K +E NRRKEMK L STLNSL+P+++S EA RTV D+LEDATNYIK
Sbjct: 2   SNPIRCQPTPQSNRKFVERNRRKEMKALFSTLNSLLPNQTSMEAPRTVPDQLEDATNYIK 61

Query: 63  ELQNHIEKLKEKKEKLMGKIKMVELEDGRRNRKKHEETKPNPKLLLQVKAHQLDSTLHIL 122
           ELQ +I+KLKEKKEKLMG  +  E E  RR R   +ETK  PKL + VKAHQ+ S++ + 
Sbjct: 62  ELQKNIKKLKEKKEKLMGMEEDEEAEGRRRRRGYEDETK--PKLSVHVKAHQIGSSVEVF 121

Query: 123 LTTGSDYHPILQQILLLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEG-MGPEDGERIC 182
           LTTGSDYH  LQQ+L LL DNG + L+VNQ+    RVFH I A+VDGEG +G  DGERIC
Sbjct: 122 LTTGSDYHFNLQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVDGEGILGGGDGERIC 181

Query: 183 ETVKNLVSEYKDGECTL 198
           ETVK  VSEYKDGEC++
Sbjct: 182 ETVKKYVSEYKDGECSV 196

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BLAST of CmUC05G105050.1 vs. NCBI nr
Match: XP_023542777.1 (uncharacterized protein LOC111802586 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 185.3 bits (469), Expect = 5.2e-43
Identity = 110/195 (56.41%), Postives = 144/195 (73.85%), Query Frame = 0


Query: 1   MANNPIRCVPSSQTDQKLIETNRRKEMKELLSTLNSLVPHESSKEAR-TVVDELEDATNY 60
           MANN I C  S++ D+KLIE NRR EMK L S L+SLVP++SS EA  T++D+LE+ATNY
Sbjct: 1   MANNFIHCPSSAKIDRKLIERNRRAEMKALFSRLHSLVPNQSSTEAETTLLDQLENATNY 60

Query: 61  IKELQNHIEKLKEKKEKLMGKIKMVELEDGRRNRKKHEETKPNPKLLLQVKAHQLDSTLH 120
           IK+L+ ++EKLKEKKEKLM   K+ E E  RR+  K        +LL+QV+AHQ+ S+L 
Sbjct: 61  IKQLKENVEKLKEKKEKLM---KLGE-ESARRSEIK-------ARLLVQVEAHQVGSSLE 120

Query: 121 ILLTTGSDYHPILQQILLLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEGMGPE--DGE 180
            LLTTGS+YH +L+QIL LL +NGT  +++N + VK RVFH I+A++ GEG   E  +GE
Sbjct: 121 FLLTTGSEYHLVLKQILQLLQENGTQIVYINHSTVKDRVFHKIIAEMVGEGTTSESTEGE 180

Query: 181 RICETVKNLVSEYKD 193
           RICETVK  VS+YKD
Sbjct: 181 RICETVKKFVSQYKD 184

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BLAST of CmUC05G105050.1 vs. NCBI nr
Match: KAG6573268.1 (Transcription factor basic helix-loop-helix 162, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 184.1 bits (466), Expect = 1.2e-42
Identity = 109/195 (55.90%), Postives = 143/195 (73.33%), Query Frame = 0


Query: 1   MANNPIRCVPSSQTDQKLIETNRRKEMKELLSTLNSLVPHESSKEAR-TVVDELEDATNY 60
           MANN I C  S++ D+KLIE NRR EMK L S L+SLVP++SS EA  T++D+LE+ATNY
Sbjct: 22  MANNFIHCPSSAKIDRKLIERNRRAEMKALFSRLHSLVPNQSSTEAETTLLDQLENATNY 81

Query: 61  IKELQNHIEKLKEKKEKLMGKIKMVELEDGRRNRKKHEETKPNPKLLLQVKAHQLDSTLH 120
           IK+L+ ++EKLKEKKEKLM   K+ E E  R +  K        +LL+QV+AHQ+ S+L 
Sbjct: 82  IKQLKENVEKLKEKKEKLM---KLGE-ESARSSEIK-------ARLLVQVEAHQVGSSLE 141

Query: 121 ILLTTGSDYHPILQQILLLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEGMGPE--DGE 180
            LLTTGSDYH +L+Q+L LL +NGT  +++N + VK RVFH I+A++ GEG   E  +GE
Sbjct: 142 FLLTTGSDYHLVLKQVLQLLQENGTQIVYINHSTVKDRVFHKIIAEMVGEGTTSESIEGE 201

Query: 181 RICETVKNLVSEYKD 193
           RICETVK  VS+YKD
Sbjct: 202 RICETVKKFVSQYKD 205

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BLAST of CmUC05G105050.1 vs. ExPASy Swiss-Prot
Match: F4JIJ7 (Transcription factor bHLH162 OS=Arabidopsis thaliana OX=3702 GN=BHLH162 PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 7.3e-16
Identity = 59/179 (32.96%), Postives = 94/179 (52.51%), Query Frame = 0


Query: 11  SSQTDQKLIETNRRKEMKELLSTLNSLVPHESSKEARTVVDELEDATNYIKELQNHIEKL 70
           S   D+K +E NRR +MK L S L SL+PH SS E  T+ D+L++A NYIK+LQ ++EK 
Sbjct: 11  SRSVDRKTVEKNRRMQMKSLYSELISLLPHHSSTEPLTLPDQLDEAANYIKKLQVNVEKK 70

Query: 71  KEKKEKLMGKIKMVELEDGRRNRKKHEETKPNPKLLLQVKAHQLDSTLHILLTTGSDYHP 130
           +E+K  L+    + +L     +          P+ L +++  +  S  HI L T  ++  
Sbjct: 71  RERKRNLVATTTLEKLNSVGSSSVSSSVDVSVPRKLPKIEIQETGSIFHIFLVTSLEHKF 130

Query: 131 ILQQIL-LLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEGMG-----PEDGERICETV 184
           +  +I+ +L  + G +  H   + V   VFHT+  KV+    G     PE  E+I  +V
Sbjct: 131 MFCEIIRVLTEELGAEITHAGYSIVDDAVFHTLHCKVEEHDYGARSQIPERLEKIVNSV 189

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BLAST of CmUC05G105050.1 vs. ExPASy TrEMBL
Match: A0A1S3B660 (transcription factor bHLH118-like OS=Cucumis melo OX=3656 GN=LOC103486444 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 6.6e-60
Identity = 129/198 (65.15%), Postives = 159/198 (80.30%), Query Frame = 0


Query: 3   NNPIRCVPSSQTDQKLIETNRRKEMKELLSTLNSLVPHESSKEA-RTVVDELEDATNYIK 62
           +NPIRC P+ Q+D+K +E NRRKEMK L STLNSL+P+ +S+EA RTV D+LEDATNYIK
Sbjct: 2   SNPIRCQPTPQSDRKFVERNRRKEMKSLFSTLNSLLPNHTSREAPRTVPDQLEDATNYIK 61

Query: 63  ELQNHIEKLKEKKEKLMGKIKMVELE--DGRRNRKKHEETKPNPKLLLQVKAHQLDSTLH 122
           ELQ +I+KLKEKKE+LMGK KM E E  +GRR R+   ETK  PKLLLQVKAHQ+ S++ 
Sbjct: 62  ELQKNIQKLKEKKEELMGKNKMEEDEEAEGRRRRRFEHETK--PKLLLQVKAHQIGSSVE 121

Query: 123 ILLTTGSDYHPILQQILLLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEGMGPEDGERI 182
           + LTTGSDYH ILQQ+L LL DNG + L+VNQ+    RVFH I A+VDGEG+GP DGERI
Sbjct: 122 VFLTTGSDYHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVDGEGIGPGDGERI 181

Query: 183 CETVKNLVSEYKDGECTL 198
           C+TVK  VS+YKD +C++
Sbjct: 182 CKTVKKFVSQYKDEQCSV 197

[Close]

BLAST of CmUC05G105050.1 vs. ExPASy TrEMBL
Match: A0A0A0LUL3 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G074400 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 4.9e-55
Identity = 124/197 (62.94%), Postives = 152/197 (77.16%), Query Frame = 0


Query: 3   NNPIRCVPSSQTDQKLIETNRRKEMKELLSTLNSLVPHESSKEA-RTVVDELEDATNYIK 62
           +NPIRC P+ Q+++K +E NRRKEMK L STLNSL+P+++S EA RTV D+LEDATNYIK
Sbjct: 2   SNPIRCQPTPQSNRKFVERNRRKEMKALFSTLNSLLPNQTSMEAPRTVPDQLEDATNYIK 61

Query: 63  ELQNHIEKLKEKKEKLMGKIKMVELEDGRRNRKKHEETKPNPKLLLQVKAHQLDSTLHIL 122
           ELQ +I+KLKEKKEKLMG  +  E E  RR R   +ETK  PKL + VKAHQ+ S++ + 
Sbjct: 62  ELQKNIKKLKEKKEKLMGMEEDEEAEGRRRRRGYEDETK--PKLSVHVKAHQIGSSVEVF 121

Query: 123 LTTGSDYHPILQQILLLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEG-MGPEDGERIC 182
           LTTGSDYH  LQQ+L LL DNG + L+VNQ+    RVFH I A+VDGEG +G  DGERIC
Sbjct: 122 LTTGSDYHFNLQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVDGEGILGGGDGERIC 181

Query: 183 ETVKNLVSEYKDGECTL 198
           ETVK  VSEYKDGEC++
Sbjct: 182 ETVKKYVSEYKDGECSV 196

[Close]

BLAST of CmUC05G105050.1 vs. ExPASy TrEMBL
Match: A0A6J1K2Y3 (transcription factor bHLH167-like OS=Cucurbita maxima OX=3661 GN=LOC111490185 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 7.3e-43
Identity = 107/195 (54.87%), Postives = 139/195 (71.28%), Query Frame = 0


Query: 1   MANNPIRCVPSSQTDQKLIETNRRKEMKELLSTLNSLVPHESSKEAR-TVVDELEDATNY 60
           MANN I C  S++ D+KLIE NRR EMK L S L+SLVP++SS EA  T++D+LE+ATNY
Sbjct: 22  MANNFIHCPSSTKIDRKLIERNRRAEMKALFSRLHSLVPNQSSTEAETTLLDQLENATNY 81

Query: 61  IKELQNHIEKLKEKKEKLMGKIKMVELEDGRRNRKKHEETKPNPKLLLQVKAHQLDSTLH 120
           IK+L+ ++EKLKEK+EKLMG               +  ETK   +LL+QV+AHQ+ S+L 
Sbjct: 82  IKQLKENVEKLKEKREKLMG--------------SREGETK--ARLLVQVEAHQVGSSLE 141

Query: 121 ILLTTGSDYHPILQQILLLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEGMGPED--GE 180
           +LLTTGSDY  +L QIL LL +NGT  +++N + VK RVFH I+A++ GEG   E   GE
Sbjct: 142 VLLTTGSDYQFVLNQILQLLQENGTQIVYINHSTVKDRVFHKIIAEMVGEGTTSESTKGE 200

Query: 181 RICETVKNLVSEYKD 193
           RICETVK  VS+YKD
Sbjct: 202 RICETVKKFVSQYKD 200

[Close]

BLAST of CmUC05G105050.1 vs. ExPASy TrEMBL
Match: A0A6J1GT92 (uncharacterized protein LOC111457229 OS=Cucurbita moschata OX=3662 GN=LOC111457229 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 6.8e-41
Identity = 107/195 (54.87%), Postives = 141/195 (72.31%), Query Frame = 0


Query: 1   MANNPIRCVPSSQTDQKLIETNRRKEMKELLSTLNSLVPHESSKEAR-TVVDELEDATNY 60
           MANN I    S++ D+KLIE NRR EMK L S L+SLVP++SS EA  T++D+LE+ATNY
Sbjct: 22  MANNFIHSPSSAKIDRKLIERNRRAEMKALFSRLHSLVPNQSSMEAETTLLDQLENATNY 81

Query: 61  IKELQNHIEKLKEKKEKLMGKIKMVELEDGRRNRKKHEETKPNPKLLLQVKAHQLDSTLH 120
           IK+L+ ++EKLKEKKEKLM   K+ E E  R +  K        +LL+QV+AHQ+ S+L 
Sbjct: 82  IKQLKENVEKLKEKKEKLM---KLGE-ESARSSEIK-------ARLLVQVEAHQVGSSLE 141

Query: 121 ILLTTGSDYHPILQQILLLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEGMGPE--DGE 180
            LLTT SDYH +L+Q+L LL +NGT  +++N + VK RVFH I+A++ GEG   E  +GE
Sbjct: 142 FLLTTRSDYHLVLKQVLQLLQENGTQIVYINHSTVKDRVFHKIIAEMVGEGTTSESIEGE 201

Query: 181 RICETVKNLVSEYKD 193
           RICETVK  VS+YKD
Sbjct: 202 RICETVKKFVSQYKD 205

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BLAST of CmUC05G105050.1 vs. ExPASy TrEMBL
Match: A0A6J1K483 (transcription factor bHLH162-like OS=Cucurbita maxima OX=3661 GN=LOC111489936 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 2.6e-40
Identity = 100/200 (50.00%), Postives = 140/200 (70.00%), Query Frame = 0


Query: 1   MANNPIRCVPSSQTDQKLIETNRRKEMKELLSTLNSLVPHESSKEARTVV-DELEDATNY 60
           MA+N I C  S++TDQ++IE NRR EMK LLS L+SLVP+++S E  T + D+LE+ATNY
Sbjct: 1   MADNFIYCPSSAKTDQEIIERNRRDEMKALLSQLHSLVPNQNSTEGETTLPDQLENATNY 60

Query: 61  IKELQNHIEKLKEKKEKLMGKIKMVELEDGRRNRKKHEETKPNPKLLLQVKAHQLDSTLH 120
           IK+L+ ++EKLKEK+EKLMG              K    ++   ++++QV+AH + S+L 
Sbjct: 61  IKQLKENVEKLKEKREKLMG-----------LGEKSTITSENKARVIVQVEAHLVGSSLE 120

Query: 121 ILLTTGSDYHPILQQILLLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEGMGPE--DGE 180
           ILLTTGSDYH +L+QI+ LL +NGT+ + +NQ+ V +R FH I+A++ GEG   E   GE
Sbjct: 121 ILLTTGSDYHLVLRQIIQLLQENGTEIVDINQSTVANRAFHKIIAQMAGEGTTLEGAKGE 180

Query: 181 RICETVKNLVSEYKDGECTL 198
           RICE VK  VS YKD + T+
Sbjct: 181 RICERVKKFVSHYKDDQYTV 189

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BLAST of CmUC05G105050.1 vs. TAIR 10
Match: AT4G20970.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 85.5 bits (210), Expect = 5.2e-17
Identity = 59/179 (32.96%), Postives = 94/179 (52.51%), Query Frame = 0


Query: 11  SSQTDQKLIETNRRKEMKELLSTLNSLVPHESSKEARTVVDELEDATNYIKELQNHIEKL 70
           S   D+K +E NRR +MK L S L SL+PH SS E  T+ D+L++A NYIK+LQ ++EK 
Sbjct: 11  SRSVDRKTVEKNRRMQMKSLYSELISLLPHHSSTEPLTLPDQLDEAANYIKKLQVNVEKK 70

Query: 71  KEKKEKLMGKIKMVELEDGRRNRKKHEETKPNPKLLLQVKAHQLDSTLHILLTTGSDYHP 130
           +E+K  L+    + +L     +          P+ L +++  +  S  HI L T  ++  
Sbjct: 71  RERKRNLVATTTLEKLNSVGSSSVSSSVDVSVPRKLPKIEIQETGSIFHIFLVTSLEHKF 130

Query: 131 ILQQIL-LLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEGMG-----PEDGERICETV 184
           +  +I+ +L  + G +  H   + V   VFHT+  KV+    G     PE  E+I  +V
Sbjct: 131 MFCEIIRVLTEELGAEITHAGYSIVDDAVFHTLHCKVEEHDYGARSQIPERLEKIVNSV 189

The following BLAST results are available for this feature:

BLAST of CmUC05G105050.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442634.2	1.4e-59	65.15	PREDICTED: transcription factor bHLH118-like [Cucumis melo]	[more]
XP_038876951.1	7.7e-55	62.75	transcription factor bHLH162-like [Benincasa hispida] >XP_038876952.1 transcript...	[more]
XP_004146605.1	1.0e-54	62.94	transcription factor bHLH162 isoform X1 [Cucumis sativus] >KGN64684.1 hypothetic...	[more]
XP_023542777.1	5.2e-43	56.41	uncharacterized protein LOC111802586 [Cucurbita pepo subsp. pepo]	[more]
KAG6573268.1	1.2e-42	55.90	Transcription factor basic helix-loop-helix 162, partial [Cucurbita argyrosperma...	[more]

BLAST of CmUC05G105050.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JIJ7	7.3e-16	32.96	Transcription factor bHLH162 OS=Arabidopsis thaliana OX=3702 GN=BHLH162 PE=1 SV=...	[more]

BLAST of CmUC05G105050.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B660	6.6e-60	65.15	transcription factor bHLH118-like OS=Cucumis melo OX=3656 GN=LOC103486444 PE=4 S...	[more]
A0A0A0LUL3	4.9e-55	62.94	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G074400 PE=4 S...	[more]
A0A6J1K2Y3	7.3e-43	54.87	transcription factor bHLH167-like OS=Cucurbita maxima OX=3661 GN=LOC111490185 PE...	[more]
A0A6J1GT92	6.8e-41	54.87	uncharacterized protein LOC111457229 OS=Cucurbita moschata OX=3662 GN=LOC1114572...	[more]
A0A6J1K483	2.6e-40	50.00	transcription factor bHLH162-like OS=Cucurbita maxima OX=3661 GN=LOC111489936 PE...	[more]

BLAST of CmUC05G105050.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G20970.1	5.2e-17	32.96	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 53..87
None	No IPR available	PANTHER	PTHR13935:SF90	TRANSCRIPTION FACTOR BHLH162	coord: 11..188
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 17..69 e-value: 2.0E-4 score: 30.7
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 17..64 e-value: 1.4E-6 score: 28.2
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 11..63 score: 10.664356
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 9..91 e-value: 2.6E-10 score: 42.1
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 17..83
IPR015660	Achaete-scute transcription factor-related	PANTHER	PTHR13935	ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED	coord: 11..188

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmUC05G105050	CmUC05G105050	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC05G105050.1-exon	CmUC05G105050.1-exon-CmU531Chr05:33537221..33537558	exon
CmUC05G105050.1-exon	CmUC05G105050.1-exon-CmU531Chr05:33539506..33539868	exon
CmUC05G105050.1-exon	CmUC05G105050.1-exon-CmU531Chr05:33539974..33540206	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC05G105050.1-three_prime_utr	CmUC05G105050.1-three_prime_utr-CmU531Chr05:33537221..33537459	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC05G105050.1-cds	CmUC05G105050.1-cds-CmU531Chr05:33537460..33537558	CDS
CmUC05G105050.1-cds	CmUC05G105050.1-cds-CmU531Chr05:33539506..33539868	CDS
CmUC05G105050.1-cds	CmUC05G105050.1-cds-CmU531Chr05:33539974..33540105	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC05G105050.1-five_prime_utr	CmUC05G105050.1-five_prime_utr-CmU531Chr05:33540106..33540206	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmUC05G105050.1	CmUC05G105050.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:2000112	regulation of cellular macromolecule biosynthetic process
cellular_component	GO:0090575	RNA polymerase II transcription regulator complex
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding