CmUC05G103580.1 (mRNA) Watermelon (USVL531) v1

Overview


Name	CmUC05G103580.1
Type	mRNA
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	PB1 domain-containing protein
Location	CmU531Chr05: 32366701 .. 32370153 (+)
Sequence length	2917
RNA-Seq Expression	CmUC05G103580.1
Synteny	CmUC05G103580.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGCCCAACTGGAGCCAATCAGTGTGTTTAGCTGTCAGCCCCCATTTGAACCCGGTCCGGTTTTATTTTGATTTTTGTCCCCCTTTTACCACCGTAAAACAAAAAAACATGTTCACCCAAATATTTCCATAATTGGTCCCTCCATTTACATGGAAATCCCATTTTATGCCCCAAATAATTATGGAAATATTAGAATTTATTTTACTCTCTCATCCCTAACTAAGTAACTGTAACTCCCAACACCCCCTTGATTATTGCTTTATTTTACCTTTCTTTCCCTAATCTGTTCATTATTCTAACTGCACCACAATCGGACTTTCAGGAAAGTGCGTTAATGATTTTATTTATATATTTAATGTATTATTATTATTATTATTATTTTAATTACTGTCCTCCGTGCTCTTTAAGAAAGACCAAAAGTTGGGGTTTTCTTTTCTCTCTTCCCTTAGCTTTCTGCTCCCAAATTCCAACTCCGCCCTTCCTCCGCCGCACGCCATGACGGAACCGCCGCCTCCGCCCCCTACTCAACCTCTTCCGCCAGCGGTGTCGCCTCATCTCAACTATCCGGAGTCGTTGGACTCCTCTCCGAGGTCTCGCAACACCGACACGTGGGATGAACCTCTCGCCCCCGGCCCCCTCGCCGGCCGTCTCCGCCTTATGTGCAGCTATGGTGGCCATATAGTCCCTCGCCCTCACGATAAGACTCTATGCTATGTCTGTGGTGAGACTCGGATCGTTGTTGTCGACCGCCATACGTCTTTATCTGACCTCACTGCCCGTTTGTCGAAGACGCTTCTCAATGGTAGGCCGTTTACCCTGAAATATCAGCTTCCGAATGAGGATTTGGATTCTCTCATTTCTGTTACCACCGATGAGGATTTGGAGAATATGATTGATGAGTATGATCGGACGGCGAGTAATTCGTCTAACCCTGCGGCAAAACCCTCGCGACTTAGGTTGTTTCTATTCCCAACTAAGCCGGATGTTTCTCAGTCGATCGGGCCAATTCTGGAGAGCTCGACTAGTTCCGATGACTGGTTTCTGAATGCTTTGAATGGTGCCGGTTTGCTCAATAGAGGTTTTTCCGACTCTGCATCGGTTAATTGCTTGCTAGGGCTTGATGACGATGTCGGTGTTAATAACCTCGATTCGGGTCCGAGGGAGGCTGATGGTTCTCAGCCTGGATCGTTTGGAAATGGTAAGGGTGGAAAACAGGATGTTCATTCTGTCCCTGATTCGCCGATGATCGAGACTTCATCGTCATTTGGGTCTACCTCTTCTTCACCTTCTCTGGCGAATTTGCCGCCGATTCGGGTTCATGTGGAGGATAGCGGCAATAGCGGTGGGGTTAGTGCTGGTGCAGTCCGAGTTCAAGATCAGAAGGTGGGAATTGAGGAGCAATTTTCGCAGATGAGTGTTGGTCAAAAGCAGCAAGATGAAGCTTTCACGGCACTCTCTTCGCCGCCTCCATTGCCTACAACTATTGTGGCTTCTGCGGCGGGCTCTGCAATTCCTGTGAGCTCAGCTGCTGGAGTAGTTGTAGGAGAATATATAAATCGGGTGATCTCCGATGACGAGAGATCGGACCACGGGGCCCCGGTTGGATACCGGAAACCACTACCACCTCAGCCACAGTCTCTGGCCCCTCAATTGCAGCAGAAATCAAGTGGGCTTGTTGATGTACCTTCCCCGGACTCGGTGTCCAGGTACTAATTGCTTGATTTTCTTTATCATTCTCTGGTATTTACTAATTCTGCTTAAATTTTTTTATCCATTAGAAGATTGTGATGGTTGTTCTGGAGGGATAATTGGTTGTTAGTCTGAGTTTGTGCATTGTCTTTTGTTTCTTCAGTGATAGTAGTTTAAACAATCCTATGTCTCGCTCAAAACCTGTGATGTATCAAGAACAAGTTGTTCATCAAATCCCCTCTTCAGCCGTTAGGCTTCCTGGCAGTCCCGCAGATCCAAAAGTCAATATTTCTGATCAAAACGCTCGGGTTCATATTCCACAGCAGGTCCAAGAATCAGGATATGTGTTACACTCTCAGTACGATCAGCATCAACACCAGCAACTTCAGCAACAACAGCAGCAGCAACAGCAACAACACCCACCTCAACCACAGCAATTCATACATGCAGGCGCACACTACATCCACCAGCACCCATCTGGTGCAGTTCAAATTCCAGCATTTTTCCCTGTATATTCTCCTCAGCACCATCATCATCCCCATCAGATGGAACAGCAGTATCCAGTCTATTACATGCCTGCTAGACAGGGCCAAGCTTATGGCAATTTGCCAGTACAGCAATCTACCATCAGCGAGTCTGGCACTGCTCTTCCTCCTGGCCGGCCCCAAACCCCTCCCAATCCAACATTGGTTACTACTGCAGCTTACAACCACATGAGGAATGCTCCTATTGCAAAAACTGAAATGGCTGCCAATGCATACAAACAGACAACTACAGCTCCTCAGTCGTTAGTTCAGGTTCCTACAAGTCAGCATCAGCAACAATATGTTGGCTACAACCAGGGTTACTCTCATATTCAGCATCCATCCCAATCAGTTGCACCTACATCCGCTACTGCAAATTATGCATATGAATTTTCAGACCCTGCTCATTCTCAGATATACTATACTCAGCCTCTAGCACCTTCTCAATACCAAGCCATGCCTGCAGCTGCTGTGATGCTGCCTGAAAATTCTGCTCAGCTTCCCACTGACATCAAGCAGCAGATGAGAACTTCACAACCATTATAATCTGTTCAGAAAGAAGAAACAATTTTGGAATAAAGTATTTGGTTTTGCTTACAATTTTCTATTTTATTGTCTGTCTTGTTATTGGTATCTATTGGTTTGTGCATGTATCTGAGATAGAGATAATAAGTATTGTTGTTGTCTTCTGGTTCGTGTGCCATATTATTTGTTTATTGTCATAGAAAATGAAAAAGTGGTCTGGAGATTATAGTTATACTGTAAAAGTTCTGAACTCAAACATGGTGTGCTTGTGCAGTCAATGTGTTATAGAATTAGCAACAGTTTTTGCATCAATCTCTTCGTTTCCCTTACATTTATTATATCTGCTGATCTCACACATGCTTGGTTTTATTTGTTATTTCTGTACTAGTATTTCCTTATGTAACTCGGCTCTCCCTACCAGTCAATTGCTCATAGCATCCAGCCATTGGAATCACATACATACCAACTCTTAAGTTTCTCCATCAGCATCTTCAACAAAAGATGATCCTTTCCTGGCAGATAGTCCCTTCACCTTGACGTTTCTGTCTGAATACTTTTGTTACTCTGATAGTGTTTACAGATTCAATGTTGCCGATCGTTTTGCATCTCTTTTACTTCGTGTGGAGAACAACAAATAAGAATCACAGGTTTCCTTTTCAGTGTGGGGAGGTTCCTGAATGTTCATGTTCAGTGGCTTGCTTGGATCCTTCGG

mRNA sequence

ATGCAGCCCAACTGGAGCCAATCAGTGTGTTTAGCTGTCAGCCCCCATTTGAACCCGGTCCGCTTTCTGCTCCCAAATTCCAACTCCGCCCTTCCTCCGCCGCACGCCATGACGGAACCGCCGCCTCCGCCCCCTACTCAACCTCTTCCGCCAGCGGTGTCGCCTCATCTCAACTATCCGGAGTCGTTGGACTCCTCTCCGAGGTCTCGCAACACCGACACGTGGGATGAACCTCTCGCCCCCGGCCCCCTCGCCGGCCGTCTCCGCCTTATGTGCAGCTATGGTGGCCATATAGTCCCTCGCCCTCACGATAAGACTCTATGCTATGTCTGTGGTGAGACTCGGATCGTTGTTGTCGACCGCCATACGTCTTTATCTGACCTCACTGCCCGTTTGTCGAAGACGCTTCTCAATGGTAGGCCGTTTACCCTGAAATATCAGCTTCCGAATGAGGATTTGGATTCTCTCATTTCTGTTACCACCGATGAGGATTTGGAGAATATGATTGATGAGTATGATCGGACGGCGAGTAATTCGTCTAACCCTGCGGCAAAACCCTCGCGACTTAGGTTGTTTCTATTCCCAACTAAGCCGGATGTTTCTCAGTCGATCGGGCCAATTCTGGAGAGCTCGACTAGTTCCGATGACTGGTTTCTGAATGCTTTGAATGGTGCCGGTTTGCTCAATAGAGGTTTTTCCGACTCTGCATCGGTTAATTGCTTGCTAGGGCTTGATGACGATGTCGGTGTTAATAACCTCGATTCGGGTCCGAGGGAGGCTGATGGTTCTCAGCCTGGATCGTTTGGAAATGGTAAGGGTGGAAAACAGGATGTTCATTCTGTCCCTGATTCGCCGATGATCGAGACTTCATCGTCATTTGGGTCTACCTCTTCTTCACCTTCTCTGGCGAATTTGCCGCCGATTCGGGTTCATGTGGAGGATAGCGGCAATAGCGGTGGGGTTAGTGCTGGTGCAGTCCGAGTTCAAGATCAGAAGGTGGGAATTGAGGAGCAATTTTCGCAGATGAGTGTTGGTCAAAAGCAGCAAGATGAAGCTTTCACGGCACTCTCTTCGCCGCCTCCATTGCCTACAACTATTGTGGCTTCTGCGGCGGGCTCTGCAATTCCTGTGAGCTCAGCTGCTGGAGTAGTTGTAGGAGAATATATAAATCGGGTGATCTCCGATGACGAGAGATCGGACCACGGGGCCCCGGTTGGATACCGGAAACCACTACCACCTCAGCCACAGTCTCTGGCCCCTCAATTGCAGCAGAAATCAAGTGGGCTTGTTGATGTACCTTCCCCGGACTCGGTGTCCAGTGATAGTAGTTTAAACAATCCTATGTCTCGCTCAAAACCTGTGATGTATCAAGAACAAGTTGTTCATCAAATCCCCTCTTCAGCCGTTAGGCTTCCTGGCAGTCCCGCAGATCCAAAAGTCAATATTTCTGATCAAAACGCTCGGGTTCATATTCCACAGCAGGTCCAAGAATCAGGATATGTGTTACACTCTCAGTACGATCAGCATCAACACCAGCAACTTCAGCAACAACAGCAGCAGCAACAGCAACAACACCCACCTCAACCACAGCAATTCATACATGCAGGCGCACACTACATCCACCAGCACCCATCTGGTGCAGTTCAAATTCCAGCATTTTTCCCTGTATATTCTCCTCAGCACCATCATCATCCCCATCAGATGGAACAGCAGTATCCAGTCTATTACATGCCTGCTAGACAGGGCCAAGCTTATGGCAATTTGCCAGTACAGCAATCTACCATCAGCGAGTCTGGCACTGCTCTTCCTCCTGGCCGGCCCCAAACCCCTCCCAATCCAACATTGGTTACTACTGCAGCTTACAACCACATGAGGAATGCTCCTATTGCAAAAACTGAAATGGCTGCCAATGCATACAAACAGACAACTACAGCTCCTCAGTCGTTAGTTCAGGTTCCTACAAGTCAGCATCAGCAACAATATGTTGGCTACAACCAGGGTTACTCTCATATTCAGCATCCATCCCAATCAGTTGCACCTACATCCGCTACTGCAAATTATGCATATGAATTTTCAGACCCTGCTCATTCTCAGATATACTATACTCAGCCTCTAGCACCTTCTCAATACCAAGCCATGCCTGCAGCTGCTGTGATGCTGCCTGAAAATTCTGCTCAGCTTCCCACTGACATCAAGCAGCAGATGAGAACTTCACAACCATTATAATCTGTTCAGAAAGAAGAAACAATTTTGGAATAAAGTATTTGGTTTTGCTTACAATTTTCTATTTTATTGTCTGTCTTGTTATTGGTATCTATTGGTTTGTGCATGTATCTGAGATAGAGATAATAAGTATTGTTGTTGTCTTCTGGTTCGTGTGCCATATTATTTGTTTATTGTCATAGAAAATGAAAAAGTGGTCTGGAGATTATAGTTATACTGTAAAAGTTCTGAACTCAAACATGGTGTGCTTGTGCAGTCAATGTGTTATAGAATTAGCAACAGTTTTTGCATCAATCTCTTCGTTTCCCTTACATTTATTATATCTGCTGATCTCACACATGCTTGGTTTTATTTGTTATTTCTGTACTAGTATTTCCTTATGTAACTCGGCTCTCCCTACCAGTCAATTGCTCATAGCATCCAGCCATTGGAATCACATACATACCAACTCTTAAGTTTCTCCATCAGCATCTTCAACAAAAGATGATCCTTTCCTGGCAGATAGTCCCTTCACCTTGACGTTTCTGTCTGAATACTTTTGTTACTCTGATAGTGTTTACAGATTCAATGTTGCCGATCGTTTTGCATCTCTTTTACTTCGTGTGGAGAACAACAAATAAGAATCACAGGTTTCCTTTTCAGTGTGGGGAGGTTCCTGAATGTTCATGTTCAGTGGCTTGCTTGGATCCTTCGG

Coding sequence (CDS)

ATGCAGCCCAACTGGAGCCAATCAGTGTGTTTAGCTGTCAGCCCCCATTTGAACCCGGTCCGCTTTCTGCTCCCAAATTCCAACTCCGCCCTTCCTCCGCCGCACGCCATGACGGAACCGCCGCCTCCGCCCCCTACTCAACCTCTTCCGCCAGCGGTGTCGCCTCATCTCAACTATCCGGAGTCGTTGGACTCCTCTCCGAGGTCTCGCAACACCGACACGTGGGATGAACCTCTCGCCCCCGGCCCCCTCGCCGGCCGTCTCCGCCTTATGTGCAGCTATGGTGGCCATATAGTCCCTCGCCCTCACGATAAGACTCTATGCTATGTCTGTGGTGAGACTCGGATCGTTGTTGTCGACCGCCATACGTCTTTATCTGACCTCACTGCCCGTTTGTCGAAGACGCTTCTCAATGGTAGGCCGTTTACCCTGAAATATCAGCTTCCGAATGAGGATTTGGATTCTCTCATTTCTGTTACCACCGATGAGGATTTGGAGAATATGATTGATGAGTATGATCGGACGGCGAGTAATTCGTCTAACCCTGCGGCAAAACCCTCGCGACTTAGGTTGTTTCTATTCCCAACTAAGCCGGATGTTTCTCAGTCGATCGGGCCAATTCTGGAGAGCTCGACTAGTTCCGATGACTGGTTTCTGAATGCTTTGAATGGTGCCGGTTTGCTCAATAGAGGTTTTTCCGACTCTGCATCGGTTAATTGCTTGCTAGGGCTTGATGACGATGTCGGTGTTAATAACCTCGATTCGGGTCCGAGGGAGGCTGATGGTTCTCAGCCTGGATCGTTTGGAAATGGTAAGGGTGGAAAACAGGATGTTCATTCTGTCCCTGATTCGCCGATGATCGAGACTTCATCGTCATTTGGGTCTACCTCTTCTTCACCTTCTCTGGCGAATTTGCCGCCGATTCGGGTTCATGTGGAGGATAGCGGCAATAGCGGTGGGGTTAGTGCTGGTGCAGTCCGAGTTCAAGATCAGAAGGTGGGAATTGAGGAGCAATTTTCGCAGATGAGTGTTGGTCAAAAGCAGCAAGATGAAGCTTTCACGGCACTCTCTTCGCCGCCTCCATTGCCTACAACTATTGTGGCTTCTGCGGCGGGCTCTGCAATTCCTGTGAGCTCAGCTGCTGGAGTAGTTGTAGGAGAATATATAAATCGGGTGATCTCCGATGACGAGAGATCGGACCACGGGGCCCCGGTTGGATACCGGAAACCACTACCACCTCAGCCACAGTCTCTGGCCCCTCAATTGCAGCAGAAATCAAGTGGGCTTGTTGATGTACCTTCCCCGGACTCGGTGTCCAGTGATAGTAGTTTAAACAATCCTATGTCTCGCTCAAAACCTGTGATGTATCAAGAACAAGTTGTTCATCAAATCCCCTCTTCAGCCGTTAGGCTTCCTGGCAGTCCCGCAGATCCAAAAGTCAATATTTCTGATCAAAACGCTCGGGTTCATATTCCACAGCAGGTCCAAGAATCAGGATATGTGTTACACTCTCAGTACGATCAGCATCAACACCAGCAACTTCAGCAACAACAGCAGCAGCAACAGCAACAACACCCACCTCAACCACAGCAATTCATACATGCAGGCGCACACTACATCCACCAGCACCCATCTGGTGCAGTTCAAATTCCAGCATTTTTCCCTGTATATTCTCCTCAGCACCATCATCATCCCCATCAGATGGAACAGCAGTATCCAGTCTATTACATGCCTGCTAGACAGGGCCAAGCTTATGGCAATTTGCCAGTACAGCAATCTACCATCAGCGAGTCTGGCACTGCTCTTCCTCCTGGCCGGCCCCAAACCCCTCCCAATCCAACATTGGTTACTACTGCAGCTTACAACCACATGAGGAATGCTCCTATTGCAAAAACTGAAATGGCTGCCAATGCATACAAACAGACAACTACAGCTCCTCAGTCGTTAGTTCAGGTTCCTACAAGTCAGCATCAGCAACAATATGTTGGCTACAACCAGGGTTACTCTCATATTCAGCATCCATCCCAATCAGTTGCACCTACATCCGCTACTGCAAATTATGCATATGAATTTTCAGACCCTGCTCATTCTCAGATATACTATACTCAGCCTCTAGCACCTTCTCAATACCAAGCCATGCCTGCAGCTGCTGTGATGCTGCCTGAAAATTCTGCTCAGCTTCCCACTGACATCAAGCAGCAGATGAGAACTTCACAACCATTATAA

Protein sequence

MQPNWSQSVCLAVSPHLNPVRFLLPNSNSALPPPHAMTEPPPPPPTQPLPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGGHIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSLISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPTKPDVSQSIGPILESSTSSDDWFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQDVHSVPDSPMIETSSSFGSTSSSPSLANLPPIRVHVEDSGNSGGVSAGAVRVQDQKVGIEEQFSQMSVGQKQQDEAFTALSSPPPLPTTIVASAAGSAIPVSSAAGVVVGEYINRVISDDERSDHGAPVGYRKPLPPQPQSLAPQLQQKSSGLVDVPSPDSVSSDSSLNNPMSRSKPVMYQEQVVHQIPSSAVRLPGSPADPKVNISDQNARVHIPQQVQESGYVLHSQYDQHQHQQLQQQQQQQQQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQMEQQYPVYYMPARQGQAYGNLPVQQSTISESGTALPPGRPQTPPNPTLVTTAAYNHMRNAPIAKTEMAANAYKQTTTAPQSLVQVPTSQHQQQYVGYNQGYSHIQHPSQSVAPTSATANYAYEFSDPAHSQIYYTQPLAPSQYQAMPAAAVMLPENSAQLPTDIKQQMRTSQPL

Homology

[Close]

BLAST of CmUC05G103580.1 vs. NCBI nr
Match: XP_038892018.1 (putative mediator of RNA polymerase II transcription subunit 12 [Benincasa hispida])

HSP 1 Score: 1319.7 bits (3414), Expect = 0.0e+00
Identity = 687/711 (96.62%), Postives = 697/711 (98.03%), Query Frame = 0


Query: 37  MTEPPPPPPTQPLPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 96
           MTEPPPPPPTQPLPP VSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG
Sbjct: 1   MTEPPPPPPTQPLPPVVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 60

Query: 97  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 156
           HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120

Query: 157 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPTKPDVSQSIGPILESSTSSDD 216
           ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFP KPDVSQSIGPILESSTSS+D
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSED 180

Query: 217 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 276
           WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ
Sbjct: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240

Query: 277 DVHSVPDSPMIETSSSFGSTSSSPSLANLPPIRVHVEDSGNSGGVSAGAVRVQDQKVGIE 336
           DVHSVPDSPMIET+SSFGSTSSSPSLANLPPIRVHVEDSGNSGGV+AGAVRVQDQKVGIE
Sbjct: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNSGGVAAGAVRVQDQKVGIE 300

Query: 337 EQFSQMSVGQKQQDEAFTALSSPPPLPTTIVAS-AAGSAIPVSSAAGVVVGEYINRVISD 396
           EQFSQMSVGQKQQDEAFTALSSPPPLPTTIVAS AAGSAIPV SAAGV VGEY NRVISD
Sbjct: 301 EQFSQMSVGQKQQDEAFTALSSPPPLPTTIVASAAAGSAIPVCSAAGVGVGEYTNRVISD 360

Query: 397 DERSDHGAPVGYRKPLPPQPQSLAPQLQQKSSGLVDVPSPDSVSSDSSLNNPMSRSKPVM 456
           DERSDHGAPVGYRKPLPPQPQSLAPQLQQKSSGLVD+PSPDSVSSDSSLNNPMSRSKPVM
Sbjct: 361 DERSDHGAPVGYRKPLPPQPQSLAPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVM 420

Query: 457 YQEQVVHQIPSSAVRLPGSPADPKVNISDQNARVHIPQQVQESGYVLHSQYDQHQHQQLQ 516
           YQEQVVHQIP+SAVRLPGSPADPKVN+SDQNARVHIPQQVQESGYVLHSQYDQHQHQQLQ
Sbjct: 421 YQEQVVHQIPTSAVRLPGSPADPKVNVSDQNARVHIPQQVQESGYVLHSQYDQHQHQQLQ 480

Query: 517 QQQQQQQ----QQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQMEQQ 576
           QQQQQQQ    QQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQMEQQ
Sbjct: 481 QQQQQQQQPQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQMEQQ 540

Query: 577 YPVYYMPARQGQAYGNLPVQQSTISESGTALPPGRPQTPPNPTLVTTAAYNHMRNAPIAK 636
           YPVYY+PARQGQAYGNLPVQQSTISES TA+PPGRPQTPPNPTLVTTAAYNHMRNAPIAK
Sbjct: 541 YPVYYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNAPIAK 600

Query: 637 TEMAANAYKQTTTAPQSLVQVPTSQHQQQYVGYNQGYSHIQHPSQSVAPTSATANYAYEF 696
           TEM+ANAYKQTTT PQSLVQVP SQHQQQYVGYNQGYSHIQHPSQSVAPTSATANYAYEF
Sbjct: 601 TEMSANAYKQTTTTPQSLVQVPASQHQQQYVGYNQGYSHIQHPSQSVAPTSATANYAYEF 660

Query: 697 SDPAHSQIYYTQPLAPSQYQAMPAAAVMLPENSAQLPTD-IKQQMRTSQPL 742
           SDPAHSQIYYTQPLAPSQYQAMPAAAVMLPENSAQLPTD +KQQMRTSQPL
Sbjct: 661 SDPAHSQIYYTQPLAPSQYQAMPAAAVMLPENSAQLPTDNMKQQMRTSQPL 711

[Close]

BLAST of CmUC05G103580.1 vs. NCBI nr
Match: XP_004135079.1 (RNA polymerase II degradation factor 1 [Cucumis sativus] >KGN52111.1 hypothetical protein Csa_009068 [Cucumis sativus])

HSP 1 Score: 1295.4 bits (3351), Expect = 0.0e+00
Identity = 675/708 (95.34%), Postives = 684/708 (96.61%), Query Frame = 0


Query: 37  MTEPPPPPPTQPLPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 96
           MTEPPP P TQP+ PAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLA RLRLMCSYGG
Sbjct: 1   MTEPPPLPITQPITPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG 60

Query: 97  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 156
           HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120

Query: 157 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPTKPDVSQSIGPILESSTSSDD 216
           ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFP KPDVSQSIGPILESSTSSDD
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180

Query: 217 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 276
           WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ
Sbjct: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240

Query: 277 DVHSVPDSPMIETSSSFGSTSSSPSLANLPPIRVHVEDSGNSGGVSAGAVRVQDQKVGIE 336
           DVHSVPDSPMIET+SSFGSTSSSPSLANLPPIRVHVEDSGN+GGV AG VRVQDQKVGIE
Sbjct: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGGVGAGVVRVQDQKVGIE 300

Query: 337 EQFSQMSVGQKQQDEAFTALSSPPPLPTTIVASAAGSAIPVSSAAGVVVGEYINRVISDD 396
           EQFSQMSVGQKQ DEAF ALSSPPPLPTTIVASAAGSAIPVSSAAGVVVGEY NRVISDD
Sbjct: 301 EQFSQMSVGQKQHDEAFAALSSPPPLPTTIVASAAGSAIPVSSAAGVVVGEYTNRVISDD 360

Query: 397 ERSDHGAPVGYRKPLPPQPQSLAPQLQQKSSGLVDVPSPDSVSSDSSLNNPMSRSKPVMY 456
           ERSDHGAPVGYRKPLPPQPQSL PQLQQKSSGLVD+PSPDSVSSDSSLNNPMSRSKPVMY
Sbjct: 361 ERSDHGAPVGYRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY 420

Query: 457 QEQVVHQIPSSAVRLPGSPADPKVNISDQNARVHIPQQVQESGYVLHSQYDQHQHQQLQQ 516
           QEQVVHQIPSSAVRLPGSPADPKVN  DQNARVHI QQVQE GYVLHSQYDQHQHQQLQQ
Sbjct: 421 QEQVVHQIPSSAVRLPGSPADPKVNFPDQNARVHIQQQVQEPGYVLHSQYDQHQHQQLQQ 480

Query: 517 Q--QQQQQQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQMEQQYPV 576
           Q  QQQQ QQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQ+EQQYPV
Sbjct: 481 QQPQQQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQYPV 540

Query: 577 YYMPARQGQAYGNLPVQQSTISESGTALPPGRPQTPPNPTLVTTAAYNHMRNAPIAKTEM 636
           YY+PARQGQAYGNLPVQQSTISES TA+PPGRPQTPPNPTLVTTAAYNHMRN PIAKTEM
Sbjct: 541 YYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEM 600

Query: 637 AANAYKQTTTAPQSLVQVPTSQHQQQYVGYNQGYSHIQHPSQSVAPTSATANYAYEFSDP 696
           AANA+KQTTT PQSLVQVPT+QHQQQYVGYNQGYSHIQHPSQSV PTSATANYAYEFSDP
Sbjct: 601 AANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVTPTSATANYAYEFSDP 660

Query: 697 AHSQIYYTQPLAPSQYQAMPAAAVMLPENSAQLPTD-IKQQMRTSQPL 742
           AHSQIYYTQPL PSQYQAMPAAAVMLPENSAQLPTD IKQQMRTSQPL
Sbjct: 661 AHSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL 708

[Close]

BLAST of CmUC05G103580.1 vs. NCBI nr
Match: XP_008446641.1 (PREDICTED: RNA polymerase II degradation factor 1 [Cucumis melo] >KAA0034588.1 RNA polymerase II degradation factor 1 [Cucumis melo var. makuwa] >TYK09140.1 RNA polymerase II degradation factor 1 [Cucumis melo var. makuwa])

HSP 1 Score: 1293.1 bits (3345), Expect = 0.0e+00
Identity = 673/707 (95.19%), Postives = 686/707 (97.03%), Query Frame = 0


Query: 37  MTEPPPPPPTQPLPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 96
           MTEPPPPPPTQ +PPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLA RLRLMCSYGG
Sbjct: 1   MTEPPPPPPTQTIPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG 60

Query: 97  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 156
           HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120

Query: 157 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPTKPDVSQSIGPILESSTSSDD 216
           ISVTTDEDLENMIDEYDRTASNSSNP+AKPSRLRLFLFP KPDVSQSIGPILESSTSSDD
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNPSAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180

Query: 217 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 276
           WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ
Sbjct: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240

Query: 277 DVHSVPDSPMIETSSSFGSTSSSPSLANLPPIRVHVEDSGNSGGVSAGAVRVQDQKVGIE 336
           DVHSVPDSPMIET+SSFGSTSSSPSLANLPPIRVHVEDSGN+G V AG VRVQDQK+GIE
Sbjct: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGAVGAGVVRVQDQKLGIE 300

Query: 337 EQFSQMSVGQKQQDEAFTALSSPPPLPTTIVASAAGSAIPVSSAAGVVVGEYINRVISDD 396
           EQFSQMSVGQKQQDEAFTALSSPPPLPTTIV SAAGSAIPVSSAAG+VVGEY NRVISDD
Sbjct: 301 EQFSQMSVGQKQQDEAFTALSSPPPLPTTIVVSAAGSAIPVSSAAGLVVGEYTNRVISDD 360

Query: 397 ERSDHGAPVGYRKPLPPQPQSLAPQLQQKSSGLVDVPSPDSVSSDSSLNNPMSRSKPVMY 456
           ERSDHGAPVG+RKPLPPQPQSL PQLQQKSSGLVD+PSPDSVSSDSSLNNPMSRSKPVMY
Sbjct: 361 ERSDHGAPVGHRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY 420

Query: 457 QEQVVHQIPSSAVRLPGSPADPKVNISDQNARVHIPQQVQESGYVLHSQYDQHQHQQLQQ 516
           QEQ VHQIPSSAVRLPGSPADPKVN  DQNARVHI QQVQESGYVLHSQYDQHQHQQLQQ
Sbjct: 421 QEQ-VHQIPSSAVRLPGSPADPKVNFPDQNARVHIQQQVQESGYVLHSQYDQHQHQQLQQ 480

Query: 517 QQ-QQQQQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQMEQQYPVY 576
           QQ QQQ QQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQ+EQQYPVY
Sbjct: 481 QQPQQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQYPVY 540

Query: 577 YMPARQGQAYGNLPVQQSTISESGTALPPGRPQTPPNPTLVTTAAYNHMRNAPIAKTEMA 636
           Y+PARQGQAYGNLPVQQSTISES TA+PPGRPQTPPNPTLVTTAAYNHMRN PIAKTEMA
Sbjct: 541 YLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEMA 600

Query: 637 ANAYKQTTTAPQSLVQVPTSQHQQQYVGYNQGYSHIQHPSQSVAPTSATANYAYEFSDPA 696
           ANA+KQTTT PQSLVQVPT+QHQQQYVGYNQGYSHIQHPSQSV PTSATANYAYEFSDPA
Sbjct: 601 ANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVPPTSATANYAYEFSDPA 660

Query: 697 HSQIYYTQPLAPSQYQAMPAAAVMLPENSAQLPTD-IKQQMRTSQPL 742
           HSQIYYTQPL PSQYQAMPAAAVMLPENSAQLPTD IKQQMRTSQPL
Sbjct: 661 HSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL 706

[Close]

BLAST of CmUC05G103580.1 vs. NCBI nr
Match: XP_022956700.1 (putative uncharacterized protein DDB_G0268364 isoform X2 [Cucurbita moschata])

HSP 1 Score: 1238.0 bits (3202), Expect = 0.0e+00
Identity = 651/720 (90.42%), Postives = 670/720 (93.06%), Query Frame = 0


Query: 37  MTEPPPPPPTQPLPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 96
           M EPPP    QPLP A SP LNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG
Sbjct: 1   MMEPPPLTTAQPLPTAASPQLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 60

Query: 97  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 156
           HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGR FTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRSFTLKYQLPNEDLDSL 120

Query: 157 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPTKPDVSQSIGPILESSTSSDD 216
           ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPTKPDVSQSIGPILESSTSS+D
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPTKPDVSQSIGPILESSTSSED 180

Query: 217 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 276
           WFLNALNGAG LNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGS GNGK GKQ
Sbjct: 181 WFLNALNGAGFLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSLGNGKSGKQ 240

Query: 277 DVHSVPDSPMIETSSSFGSTSSSPSLANLPPIRVHVEDSGNSGGVSAGAVRVQDQKVGIE 336
           D+HSVPDSPMIET+SSFGSTSSSPSLANLPPIRVHVEDS NSGG  A AVR+QDQKVG+E
Sbjct: 241 DIHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSVNSGGCGAAAVRIQDQKVGVE 300

Query: 337 EQFSQMSVGQKQQDEAFTALSSPPPLPTTIVASAAGSAIPVSSAAGVVVGEYINRVISDD 396
           EQFSQM +GQKQQDEAFTALSSPPPLPTTIVASAAGSAIPVSSAAGV VG+Y NRVISDD
Sbjct: 301 EQFSQMIIGQKQQDEAFTALSSPPPLPTTIVASAAGSAIPVSSAAGVGVGDYTNRVISDD 360

Query: 397 ERSDHGAPVGYRKPLPPQPQSLAPQLQQKSSGLVDVPSPDSVSSDSSLNNPMSRSKPVMY 456
           ERSDHGAPVGYR+PLPPQPQSLAPQLQQKSSGLVD+PSPDSVSSD+SLNN MSRSKPVMY
Sbjct: 361 ERSDHGAPVGYRQPLPPQPQSLAPQLQQKSSGLVDIPSPDSVSSDTSLNNQMSRSKPVMY 420

Query: 457 QEQVVHQIPSSAVRLPGSPADPKVNISDQNARVHIPQQVQESGYVLHSQYDQHQHQQL-- 516
           QEQVVHQIPSS   LPG+PADP+VNISDQNARVHIPQQVQESGYVL S YDQHQHQQL  
Sbjct: 421 QEQVVHQIPSSTAWLPGNPADPEVNISDQNARVHIPQQVQESGYVLQSHYDQHQHQQLQQ 480

Query: 517 ------------QQQQQQQQQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHH 576
                       QQQQQQQ QQHP QPQQFIHAGAHYIHQHPSGAV IPAFFPVYSPQ H
Sbjct: 481 LQQQQQQQQLQQQQQQQQQPQQHPSQPQQFIHAGAHYIHQHPSGAVPIPAFFPVYSPQPH 540

Query: 577 HHPHQMEQQYPVYYMPARQGQAYGNLPVQQSTISESGTALPPGRPQTPPNPTLVTTAAYN 636
           HHPHQMEQQYPVYY+PARQGQAYGNLPVQQS+ISES TA+PPGRPQTPPNPTLVT+AAYN
Sbjct: 541 HHPHQMEQQYPVYYLPARQGQAYGNLPVQQSSISESATAIPPGRPQTPPNPTLVTSAAYN 600

Query: 637 HMRNAPIAKTEMAANAYKQTTTAPQSLVQVPTSQHQQQYVGYNQGYSHIQHPSQSVAPTS 696
           H+RNAPIAKTEMAA AYKQTTTA QSLVQVPT+QHQQQYV YNQGYSHIQHPSQSVAPTS
Sbjct: 601 HVRNAPIAKTEMAAKAYKQTTTAAQSLVQVPTNQHQQQYVAYNQGYSHIQHPSQSVAPTS 660

Query: 697 ATANYAYEFSDPAHSQIYYTQPLAPSQYQAMPAAAVMLPENSAQLPTD-IKQQMRTSQPL 742
           ATANYAYEFSDPAHSQIY+TQPLAPSQYQAMPAAAVMLPENSAQ PTD IK QMRTSQPL
Sbjct: 661 ATANYAYEFSDPAHSQIYFTQPLAPSQYQAMPAAAVMLPENSAQHPTDNIKPQMRTSQPL 720

[Close]

BLAST of CmUC05G103580.1 vs. NCBI nr
Match: XP_022966093.1 (RNA polymerase II degradation factor 1-like [Cucurbita maxima])

HSP 1 Score: 1231.1 bits (3184), Expect = 0.0e+00
Identity = 652/739 (88.23%), Postives = 670/739 (90.66%), Query Frame = 0


Query: 37  MTEPPPPPPTQPLPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 96
           M EPPP    QPLP A SP LNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG
Sbjct: 1   MMEPPPLTTAQPLPTAASPQLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 60

Query: 97  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 156
           HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGR FTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRSFTLKYQLPNEDLDSL 120

Query: 157 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPTKPDVSQSIGPILESSTSSDD 216
           ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPTKPDVSQSIGPILESSTSS+D
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPTKPDVSQSIGPILESSTSSED 180

Query: 217 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 276
           WFLNALNGAG LNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGS GNGK GKQ
Sbjct: 181 WFLNALNGAGFLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSLGNGKSGKQ 240

Query: 277 DVHSVPDSPMIETSSSFGSTSSSPSLANLPPIRVHVEDSGNSGGVSAGAVRVQDQKVGIE 336
           D+HSVPDSPMIET+SSFGSTSSSPSLANLPPIRVHVEDS NSGG  AGAVR+QDQKVGIE
Sbjct: 241 DIHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSVNSGGGGAGAVRIQDQKVGIE 300

Query: 337 EQFSQMSVGQKQQDEAFTALSSPPPLPTTIVASAAGSAIPVSSAAGVVVGEYINRVISDD 396
           EQFSQM +GQK QDEAFTALSSPPPLPTTIVASAAGSAIPVS AA V VG+Y+NRVISDD
Sbjct: 301 EQFSQMIIGQKLQDEAFTALSSPPPLPTTIVASAAGSAIPVSLAAAVGVGDYMNRVISDD 360

Query: 397 ERSDHGAPVGYRKPLPPQPQSLAPQLQQKSSGLVDVPSPDSVSSDSSLNNPMSRSKPVMY 456
           ERSDHGAPVGYR+PLPPQPQSL PQLQQKSSGLVD+PSPDSVSSD+SLNN MSRSKPVMY
Sbjct: 361 ERSDHGAPVGYRQPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDTSLNNQMSRSKPVMY 420

Query: 457 QEQVVHQIPSSAVRLPGSPADPKVNISDQNARVHIPQQVQESGYVLHSQYDQHQHQQL-- 516
           QEQVVHQIPSS  RLPG+P+DP+VNISDQNARVHIPQQVQESGYVL S YDQHQHQQL  
Sbjct: 421 QEQVVHQIPSSTARLPGNPSDPEVNISDQNARVHIPQQVQESGYVLQSHYDQHQHQQLQQ 480

Query: 517 -------------------------------QQQQQQQQQQHPPQPQQFIHAGAHYIHQH 576
                                          QQQQQQQQQQHP QPQQFIHAGAHYIHQH
Sbjct: 481 LQQQQQLQQQQQLQQQHQQHQQQQLQQQQQQQQQQQQQQQQHPSQPQQFIHAGAHYIHQH 540

Query: 577 PSGAVQIPAFFPVYSPQHHHHPHQMEQQYPVYYMPARQGQAYGNLPVQQSTISESGTALP 636
           PSGAV IPAFFPVYSPQ HHHPHQMEQQYPVYY+PARQGQAYGNLPVQQS+ISES TA+P
Sbjct: 541 PSGAVPIPAFFPVYSPQPHHHPHQMEQQYPVYYLPARQGQAYGNLPVQQSSISESATAIP 600

Query: 637 PGRPQTPPNPTLVTTAAYNHMRNAPIAKTEMAANAYKQTTTAPQSLVQVPTSQHQQQYVG 696
           PGRPQTPPNPTLVTTAAYNH RNAPIAKTEMAA AYKQTTTA QSLVQVPT+QHQQQYV 
Sbjct: 601 PGRPQTPPNPTLVTTAAYNHARNAPIAKTEMAAKAYKQTTTAAQSLVQVPTNQHQQQYVA 660

Query: 697 YNQGYSHIQHPSQSVAPTSATANYAYEFSDPAHSQIYYTQPLAPSQYQAMPAAAVMLPEN 742
           YNQGYSHIQHPSQSVAPTSATANYAYEFSDPAHSQIYYTQPLAPSQYQAMPAAAVMLPE+
Sbjct: 661 YNQGYSHIQHPSQSVAPTSATANYAYEFSDPAHSQIYYTQPLAPSQYQAMPAAAVMLPES 720

[Close]

BLAST of CmUC05G103580.1 vs. ExPASy TrEMBL
Match: A0A0A0KWH3 (PB1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G610450 PE=4 SV=1)

HSP 1 Score: 1295.4 bits (3351), Expect = 0.0e+00
Identity = 675/708 (95.34%), Postives = 684/708 (96.61%), Query Frame = 0


Query: 37  MTEPPPPPPTQPLPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 96
           MTEPPP P TQP+ PAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLA RLRLMCSYGG
Sbjct: 1   MTEPPPLPITQPITPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG 60

Query: 97  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 156
           HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120

Query: 157 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPTKPDVSQSIGPILESSTSSDD 216
           ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFP KPDVSQSIGPILESSTSSDD
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180

Query: 217 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 276
           WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ
Sbjct: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240

Query: 277 DVHSVPDSPMIETSSSFGSTSSSPSLANLPPIRVHVEDSGNSGGVSAGAVRVQDQKVGIE 336
           DVHSVPDSPMIET+SSFGSTSSSPSLANLPPIRVHVEDSGN+GGV AG VRVQDQKVGIE
Sbjct: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGGVGAGVVRVQDQKVGIE 300

Query: 337 EQFSQMSVGQKQQDEAFTALSSPPPLPTTIVASAAGSAIPVSSAAGVVVGEYINRVISDD 396
           EQFSQMSVGQKQ DEAF ALSSPPPLPTTIVASAAGSAIPVSSAAGVVVGEY NRVISDD
Sbjct: 301 EQFSQMSVGQKQHDEAFAALSSPPPLPTTIVASAAGSAIPVSSAAGVVVGEYTNRVISDD 360

Query: 397 ERSDHGAPVGYRKPLPPQPQSLAPQLQQKSSGLVDVPSPDSVSSDSSLNNPMSRSKPVMY 456
           ERSDHGAPVGYRKPLPPQPQSL PQLQQKSSGLVD+PSPDSVSSDSSLNNPMSRSKPVMY
Sbjct: 361 ERSDHGAPVGYRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY 420

Query: 457 QEQVVHQIPSSAVRLPGSPADPKVNISDQNARVHIPQQVQESGYVLHSQYDQHQHQQLQQ 516
           QEQVVHQIPSSAVRLPGSPADPKVN  DQNARVHI QQVQE GYVLHSQYDQHQHQQLQQ
Sbjct: 421 QEQVVHQIPSSAVRLPGSPADPKVNFPDQNARVHIQQQVQEPGYVLHSQYDQHQHQQLQQ 480

Query: 517 Q--QQQQQQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQMEQQYPV 576
           Q  QQQQ QQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQ+EQQYPV
Sbjct: 481 QQPQQQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQYPV 540

Query: 577 YYMPARQGQAYGNLPVQQSTISESGTALPPGRPQTPPNPTLVTTAAYNHMRNAPIAKTEM 636
           YY+PARQGQAYGNLPVQQSTISES TA+PPGRPQTPPNPTLVTTAAYNHMRN PIAKTEM
Sbjct: 541 YYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEM 600

Query: 637 AANAYKQTTTAPQSLVQVPTSQHQQQYVGYNQGYSHIQHPSQSVAPTSATANYAYEFSDP 696
           AANA+KQTTT PQSLVQVPT+QHQQQYVGYNQGYSHIQHPSQSV PTSATANYAYEFSDP
Sbjct: 601 AANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVTPTSATANYAYEFSDP 660

Query: 697 AHSQIYYTQPLAPSQYQAMPAAAVMLPENSAQLPTD-IKQQMRTSQPL 742
           AHSQIYYTQPL PSQYQAMPAAAVMLPENSAQLPTD IKQQMRTSQPL
Sbjct: 661 AHSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL 708

[Close]

BLAST of CmUC05G103580.1 vs. ExPASy TrEMBL
Match: A0A5A7SVC4 (RNA polymerase II degradation factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001310 PE=4 SV=1)

HSP 1 Score: 1293.1 bits (3345), Expect = 0.0e+00
Identity = 673/707 (95.19%), Postives = 686/707 (97.03%), Query Frame = 0


Query: 37  MTEPPPPPPTQPLPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 96
           MTEPPPPPPTQ +PPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLA RLRLMCSYGG
Sbjct: 1   MTEPPPPPPTQTIPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG 60

Query: 97  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 156
           HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120

Query: 157 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPTKPDVSQSIGPILESSTSSDD 216
           ISVTTDEDLENMIDEYDRTASNSSNP+AKPSRLRLFLFP KPDVSQSIGPILESSTSSDD
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNPSAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180

Query: 217 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 276
           WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ
Sbjct: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240

Query: 277 DVHSVPDSPMIETSSSFGSTSSSPSLANLPPIRVHVEDSGNSGGVSAGAVRVQDQKVGIE 336
           DVHSVPDSPMIET+SSFGSTSSSPSLANLPPIRVHVEDSGN+G V AG VRVQDQK+GIE
Sbjct: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGAVGAGVVRVQDQKLGIE 300

Query: 337 EQFSQMSVGQKQQDEAFTALSSPPPLPTTIVASAAGSAIPVSSAAGVVVGEYINRVISDD 396
           EQFSQMSVGQKQQDEAFTALSSPPPLPTTIV SAAGSAIPVSSAAG+VVGEY NRVISDD
Sbjct: 301 EQFSQMSVGQKQQDEAFTALSSPPPLPTTIVVSAAGSAIPVSSAAGLVVGEYTNRVISDD 360

Query: 397 ERSDHGAPVGYRKPLPPQPQSLAPQLQQKSSGLVDVPSPDSVSSDSSLNNPMSRSKPVMY 456
           ERSDHGAPVG+RKPLPPQPQSL PQLQQKSSGLVD+PSPDSVSSDSSLNNPMSRSKPVMY
Sbjct: 361 ERSDHGAPVGHRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY 420

Query: 457 QEQVVHQIPSSAVRLPGSPADPKVNISDQNARVHIPQQVQESGYVLHSQYDQHQHQQLQQ 516
           QEQ VHQIPSSAVRLPGSPADPKVN  DQNARVHI QQVQESGYVLHSQYDQHQHQQLQQ
Sbjct: 421 QEQ-VHQIPSSAVRLPGSPADPKVNFPDQNARVHIQQQVQESGYVLHSQYDQHQHQQLQQ 480

Query: 517 QQ-QQQQQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQMEQQYPVY 576
           QQ QQQ QQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQ+EQQYPVY
Sbjct: 481 QQPQQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQYPVY 540

Query: 577 YMPARQGQAYGNLPVQQSTISESGTALPPGRPQTPPNPTLVTTAAYNHMRNAPIAKTEMA 636
           Y+PARQGQAYGNLPVQQSTISES TA+PPGRPQTPPNPTLVTTAAYNHMRN PIAKTEMA
Sbjct: 541 YLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEMA 600

Query: 637 ANAYKQTTTAPQSLVQVPTSQHQQQYVGYNQGYSHIQHPSQSVAPTSATANYAYEFSDPA 696
           ANA+KQTTT PQSLVQVPT+QHQQQYVGYNQGYSHIQHPSQSV PTSATANYAYEFSDPA
Sbjct: 601 ANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVPPTSATANYAYEFSDPA 660

Query: 697 HSQIYYTQPLAPSQYQAMPAAAVMLPENSAQLPTD-IKQQMRTSQPL 742
           HSQIYYTQPL PSQYQAMPAAAVMLPENSAQLPTD IKQQMRTSQPL
Sbjct: 661 HSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL 706

[Close]

BLAST of CmUC05G103580.1 vs. ExPASy TrEMBL
Match: A0A1S3BF26 (RNA polymerase II degradation factor 1 OS=Cucumis melo OX=3656 GN=LOC103489312 PE=4 SV=1)

HSP 1 Score: 1293.1 bits (3345), Expect = 0.0e+00
Identity = 673/707 (95.19%), Postives = 686/707 (97.03%), Query Frame = 0


Query: 37  MTEPPPPPPTQPLPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 96
           MTEPPPPPPTQ +PPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLA RLRLMCSYGG
Sbjct: 1   MTEPPPPPPTQTIPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG 60

Query: 97  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 156
           HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120

Query: 157 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPTKPDVSQSIGPILESSTSSDD 216
           ISVTTDEDLENMIDEYDRTASNSSNP+AKPSRLRLFLFP KPDVSQSIGPILESSTSSDD
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNPSAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180

Query: 217 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 276
           WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ
Sbjct: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240

Query: 277 DVHSVPDSPMIETSSSFGSTSSSPSLANLPPIRVHVEDSGNSGGVSAGAVRVQDQKVGIE 336
           DVHSVPDSPMIET+SSFGSTSSSPSLANLPPIRVHVEDSGN+G V AG VRVQDQK+GIE
Sbjct: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGAVGAGVVRVQDQKLGIE 300

Query: 337 EQFSQMSVGQKQQDEAFTALSSPPPLPTTIVASAAGSAIPVSSAAGVVVGEYINRVISDD 396
           EQFSQMSVGQKQQDEAFTALSSPPPLPTTIV SAAGSAIPVSSAAG+VVGEY NRVISDD
Sbjct: 301 EQFSQMSVGQKQQDEAFTALSSPPPLPTTIVVSAAGSAIPVSSAAGLVVGEYTNRVISDD 360

Query: 397 ERSDHGAPVGYRKPLPPQPQSLAPQLQQKSSGLVDVPSPDSVSSDSSLNNPMSRSKPVMY 456
           ERSDHGAPVG+RKPLPPQPQSL PQLQQKSSGLVD+PSPDSVSSDSSLNNPMSRSKPVMY
Sbjct: 361 ERSDHGAPVGHRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY 420

Query: 457 QEQVVHQIPSSAVRLPGSPADPKVNISDQNARVHIPQQVQESGYVLHSQYDQHQHQQLQQ 516
           QEQ VHQIPSSAVRLPGSPADPKVN  DQNARVHI QQVQESGYVLHSQYDQHQHQQLQQ
Sbjct: 421 QEQ-VHQIPSSAVRLPGSPADPKVNFPDQNARVHIQQQVQESGYVLHSQYDQHQHQQLQQ 480

Query: 517 QQ-QQQQQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQMEQQYPVY 576
           QQ QQQ QQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQ+EQQYPVY
Sbjct: 481 QQPQQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQYPVY 540

Query: 577 YMPARQGQAYGNLPVQQSTISESGTALPPGRPQTPPNPTLVTTAAYNHMRNAPIAKTEMA 636
           Y+PARQGQAYGNLPVQQSTISES TA+PPGRPQTPPNPTLVTTAAYNHMRN PIAKTEMA
Sbjct: 541 YLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEMA 600

Query: 637 ANAYKQTTTAPQSLVQVPTSQHQQQYVGYNQGYSHIQHPSQSVAPTSATANYAYEFSDPA 696
           ANA+KQTTT PQSLVQVPT+QHQQQYVGYNQGYSHIQHPSQSV PTSATANYAYEFSDPA
Sbjct: 601 ANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVPPTSATANYAYEFSDPA 660

Query: 697 HSQIYYTQPLAPSQYQAMPAAAVMLPENSAQLPTD-IKQQMRTSQPL 742
           HSQIYYTQPL PSQYQAMPAAAVMLPENSAQLPTD IKQQMRTSQPL
Sbjct: 661 HSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL 706

[Close]

BLAST of CmUC05G103580.1 vs. ExPASy TrEMBL
Match: A0A6J1GYH7 (PB1 domain-containing protein OS=Cucurbita moschata OX=3662 GN=LOC111458340 PE=4 SV=1)

HSP 1 Score: 1238.0 bits (3202), Expect = 0.0e+00
Identity = 651/720 (90.42%), Postives = 670/720 (93.06%), Query Frame = 0


Query: 37  MTEPPPPPPTQPLPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 96
           M EPPP    QPLP A SP LNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG
Sbjct: 1   MMEPPPLTTAQPLPTAASPQLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 60

Query: 97  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 156
           HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGR FTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRSFTLKYQLPNEDLDSL 120

Query: 157 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPTKPDVSQSIGPILESSTSSDD 216
           ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPTKPDVSQSIGPILESSTSS+D
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPTKPDVSQSIGPILESSTSSED 180

Query: 217 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 276
           WFLNALNGAG LNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGS GNGK GKQ
Sbjct: 181 WFLNALNGAGFLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSLGNGKSGKQ 240

Query: 277 DVHSVPDSPMIETSSSFGSTSSSPSLANLPPIRVHVEDSGNSGGVSAGAVRVQDQKVGIE 336
           D+HSVPDSPMIET+SSFGSTSSSPSLANLPPIRVHVEDS NSGG  A AVR+QDQKVG+E
Sbjct: 241 DIHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSVNSGGCGAAAVRIQDQKVGVE 300

Query: 337 EQFSQMSVGQKQQDEAFTALSSPPPLPTTIVASAAGSAIPVSSAAGVVVGEYINRVISDD 396
           EQFSQM +GQKQQDEAFTALSSPPPLPTTIVASAAGSAIPVSSAAGV VG+Y NRVISDD
Sbjct: 301 EQFSQMIIGQKQQDEAFTALSSPPPLPTTIVASAAGSAIPVSSAAGVGVGDYTNRVISDD 360

Query: 397 ERSDHGAPVGYRKPLPPQPQSLAPQLQQKSSGLVDVPSPDSVSSDSSLNNPMSRSKPVMY 456
           ERSDHGAPVGYR+PLPPQPQSLAPQLQQKSSGLVD+PSPDSVSSD+SLNN MSRSKPVMY
Sbjct: 361 ERSDHGAPVGYRQPLPPQPQSLAPQLQQKSSGLVDIPSPDSVSSDTSLNNQMSRSKPVMY 420

Query: 457 QEQVVHQIPSSAVRLPGSPADPKVNISDQNARVHIPQQVQESGYVLHSQYDQHQHQQL-- 516
           QEQVVHQIPSS   LPG+PADP+VNISDQNARVHIPQQVQESGYVL S YDQHQHQQL  
Sbjct: 421 QEQVVHQIPSSTAWLPGNPADPEVNISDQNARVHIPQQVQESGYVLQSHYDQHQHQQLQQ 480

Query: 517 ------------QQQQQQQQQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHH 576
                       QQQQQQQ QQHP QPQQFIHAGAHYIHQHPSGAV IPAFFPVYSPQ H
Sbjct: 481 LQQQQQQQQLQQQQQQQQQPQQHPSQPQQFIHAGAHYIHQHPSGAVPIPAFFPVYSPQPH 540

Query: 577 HHPHQMEQQYPVYYMPARQGQAYGNLPVQQSTISESGTALPPGRPQTPPNPTLVTTAAYN 636
           HHPHQMEQQYPVYY+PARQGQAYGNLPVQQS+ISES TA+PPGRPQTPPNPTLVT+AAYN
Sbjct: 541 HHPHQMEQQYPVYYLPARQGQAYGNLPVQQSSISESATAIPPGRPQTPPNPTLVTSAAYN 600

Query: 637 HMRNAPIAKTEMAANAYKQTTTAPQSLVQVPTSQHQQQYVGYNQGYSHIQHPSQSVAPTS 696
           H+RNAPIAKTEMAA AYKQTTTA QSLVQVPT+QHQQQYV YNQGYSHIQHPSQSVAPTS
Sbjct: 601 HVRNAPIAKTEMAAKAYKQTTTAAQSLVQVPTNQHQQQYVAYNQGYSHIQHPSQSVAPTS 660

Query: 697 ATANYAYEFSDPAHSQIYYTQPLAPSQYQAMPAAAVMLPENSAQLPTD-IKQQMRTSQPL 742
           ATANYAYEFSDPAHSQIY+TQPLAPSQYQAMPAAAVMLPENSAQ PTD IK QMRTSQPL
Sbjct: 661 ATANYAYEFSDPAHSQIYFTQPLAPSQYQAMPAAAVMLPENSAQHPTDNIKPQMRTSQPL 720

[Close]

BLAST of CmUC05G103580.1 vs. ExPASy TrEMBL
Match: A0A6J1HQW4 (RNA polymerase II degradation factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111465567 PE=4 SV=1)

HSP 1 Score: 1231.1 bits (3184), Expect = 0.0e+00
Identity = 652/739 (88.23%), Postives = 670/739 (90.66%), Query Frame = 0


Query: 37  MTEPPPPPPTQPLPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 96
           M EPPP    QPLP A SP LNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG
Sbjct: 1   MMEPPPLTTAQPLPTAASPQLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 60

Query: 97  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 156
           HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGR FTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRSFTLKYQLPNEDLDSL 120

Query: 157 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPTKPDVSQSIGPILESSTSSDD 216
           ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPTKPDVSQSIGPILESSTSS+D
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPTKPDVSQSIGPILESSTSSED 180

Query: 217 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 276
           WFLNALNGAG LNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGS GNGK GKQ
Sbjct: 181 WFLNALNGAGFLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSLGNGKSGKQ 240

Query: 277 DVHSVPDSPMIETSSSFGSTSSSPSLANLPPIRVHVEDSGNSGGVSAGAVRVQDQKVGIE 336
           D+HSVPDSPMIET+SSFGSTSSSPSLANLPPIRVHVEDS NSGG  AGAVR+QDQKVGIE
Sbjct: 241 DIHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSVNSGGGGAGAVRIQDQKVGIE 300

Query: 337 EQFSQMSVGQKQQDEAFTALSSPPPLPTTIVASAAGSAIPVSSAAGVVVGEYINRVISDD 396
           EQFSQM +GQK QDEAFTALSSPPPLPTTIVASAAGSAIPVS AA V VG+Y+NRVISDD
Sbjct: 301 EQFSQMIIGQKLQDEAFTALSSPPPLPTTIVASAAGSAIPVSLAAAVGVGDYMNRVISDD 360

Query: 397 ERSDHGAPVGYRKPLPPQPQSLAPQLQQKSSGLVDVPSPDSVSSDSSLNNPMSRSKPVMY 456
           ERSDHGAPVGYR+PLPPQPQSL PQLQQKSSGLVD+PSPDSVSSD+SLNN MSRSKPVMY
Sbjct: 361 ERSDHGAPVGYRQPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDTSLNNQMSRSKPVMY 420

Query: 457 QEQVVHQIPSSAVRLPGSPADPKVNISDQNARVHIPQQVQESGYVLHSQYDQHQHQQL-- 516
           QEQVVHQIPSS  RLPG+P+DP+VNISDQNARVHIPQQVQESGYVL S YDQHQHQQL  
Sbjct: 421 QEQVVHQIPSSTARLPGNPSDPEVNISDQNARVHIPQQVQESGYVLQSHYDQHQHQQLQQ 480

Query: 517 -------------------------------QQQQQQQQQQHPPQPQQFIHAGAHYIHQH 576
                                          QQQQQQQQQQHP QPQQFIHAGAHYIHQH
Sbjct: 481 LQQQQQLQQQQQLQQQHQQHQQQQLQQQQQQQQQQQQQQQQHPSQPQQFIHAGAHYIHQH 540

Query: 577 PSGAVQIPAFFPVYSPQHHHHPHQMEQQYPVYYMPARQGQAYGNLPVQQSTISESGTALP 636
           PSGAV IPAFFPVYSPQ HHHPHQMEQQYPVYY+PARQGQAYGNLPVQQS+ISES TA+P
Sbjct: 541 PSGAVPIPAFFPVYSPQPHHHPHQMEQQYPVYYLPARQGQAYGNLPVQQSSISESATAIP 600

Query: 637 PGRPQTPPNPTLVTTAAYNHMRNAPIAKTEMAANAYKQTTTAPQSLVQVPTSQHQQQYVG 696
           PGRPQTPPNPTLVTTAAYNH RNAPIAKTEMAA AYKQTTTA QSLVQVPT+QHQQQYV 
Sbjct: 601 PGRPQTPPNPTLVTTAAYNHARNAPIAKTEMAAKAYKQTTTAAQSLVQVPTNQHQQQYVA 660

Query: 697 YNQGYSHIQHPSQSVAPTSATANYAYEFSDPAHSQIYYTQPLAPSQYQAMPAAAVMLPEN 742
           YNQGYSHIQHPSQSVAPTSATANYAYEFSDPAHSQIYYTQPLAPSQYQAMPAAAVMLPE+
Sbjct: 661 YNQGYSHIQHPSQSVAPTSATANYAYEFSDPAHSQIYYTQPLAPSQYQAMPAAAVMLPES 720

[Close]

BLAST of CmUC05G103580.1 vs. TAIR 10
Match: AT2G01190.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 545.0 bits (1403), Expect = 9.0e-155
Identity = 379/770 (49.22%), Postives = 487/770 (63.25%), Query Frame = 0


Query: 32  PPPH-----AMTEPPPPPPTQPLPPAVSPHL--NYPESLDSSPRSRNTDTWDEPLAP--- 91
           PPP      A+        T P+PP + PH+  +YPESLDSSPRSR TD WD+  AP   
Sbjct: 3   PPPSSLSSTAVASTSISAATAPVPPPLPPHVTSSYPESLDSSPRSRTTDGWDDLPAPSGG 62

Query: 92  ------GPLAGRLRLMCSYGGHIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKT 151
                   ++ +LR MCSYGGHI+PRPHDK+LCY+ G+TRIVVVDR++SL  L ARLS T
Sbjct: 63  GGGGGGSAVSSKLRFMCSYGGHILPRPHDKSLCYMGGDTRIVVVDRNSSLPSLIARLSNT 122

Query: 152 LLNGRPFTLKYQLPNEDLDSLISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFP 211
           LL+GR FTLKYQLP+EDLDSLISVTTDEDL+NMI+EYDRT S S+  + KPSRLRLFLF 
Sbjct: 123 LLDGRSFTLKYQLPSEDLDSLISVTTDEDLDNMIEEYDRTISASN--STKPSRLRLFLFT 182

Query: 212 TKPDVSQSIGPILESSTSSDDWFLNALNGAGLLNRGFSDS-ASVNCLLGLDDDVGV--NN 271
           +KP+ +QS+G ILESS  SDDWFLNALN AGLLNRGFSDS  +VN LLGLDD + +  N+
Sbjct: 183 SKPEATQSMGQILESSAKSDDWFLNALNSAGLLNRGFSDSDTNVNRLLGLDDALALRSNS 242

Query: 272 LDSGPREADGSQ----------PGSFGNGKGGKQDVHSVPDSPMIETSSSFGSTSSSPSL 331
            D+  R+ D             P      + G QDV+ +PDSPM++TSSSFGSTSSSPSL
Sbjct: 243 GDNNNRDGDDGSVKSAKQQQPPPPQQQEQQQGGQDVNCLPDSPMLDTSSSFGSTSSSPSL 302

Query: 332 ANLPPIRVHVEDSGNSGGVSAGAVRVQDQK-VGIEEQFSQMSVGQKQQ--DEAFTALSSP 391
           ANLPPIRVHVE+ G       G   + DQ+ +GIEEQF++ +VG K Q  D+ F A+SSP
Sbjct: 303 ANLPPIRVHVEEPG-------GVRTLPDQRNLGIEEQFARFNVGNKHQLHDDGFAAISSP 362

Query: 392 PPLPTTIVASAAGSAIPVSSAAGVVVGEYINRVISDDERSDHGAPVGYRKPLPP--QPQS 451
           PP+P TI   AA    PV++A   V  E+  RV SDDERSDHG   GYRKP  P  QPQ+
Sbjct: 363 PPMPVTIALPAA----PVTAA--TVSNEFQARVYSDDERSDHGVQAGYRKPPTPRSQPQN 422

Query: 452 LAP----QLQQKSSGLVDVPSPDSVSSDSSLNNPMSRSKPVMYQEQVVHQIPSSAVRLPG 511
           L P    QL+  S G  ++PSP+SVSSDSS++NPM   +P +YQE +  QIPS +  + G
Sbjct: 423 LPPQQAHQLKSNSGGGHELPSPNSVSSDSSMSNPMFHQRPSVYQEPIA-QIPSGSTVVTG 482

Query: 512 --SPADPKVNISDQNARVHIPQQVQESGYVLHSQYDQHQHQQLQQQQQQQQQQHPPQPQQ 571
             +P+DP   +S          Q Q+  Y+LH Q+            +QQ  Q  PQ QQ
Sbjct: 483 MINPSDPSTLLSQ--------HQNQDPAYILHPQF------------EQQSAQSQPQ-QQ 542

Query: 572 FIHAGA--HYIHQHPSGAVQIPAFFPVYSPQH-----HHHPHQMEQQ-YPVYYMPARQGQ 631
           FIH  A   YIH HPS  + +P +  VY  Q      H H  +++QQ YPVYY+ A    
Sbjct: 543 FIHTAAPPQYIHHHPSSGLPVPTYIQVYPSQQPQQSFHQHAGRLDQQPYPVYYVTAPVPP 602

Query: 632 AYGNLPVQQS-TISESGTALPPGRPQTPPNPTLVTTAAYNHMRNAPIAKTEMA-ANAYKQ 691
              ++PV QS ++S++  ++P       PN T++     NHMR+    K EM  A  Y  
Sbjct: 603 RPYSMPVPQSPSVSDAAGSIPSNH----PNSTMMPPPPNNHMRSVSSGKPEMGQAGVY-- 662

Query: 692 TTTAP-----QSLVQVPTSQHQQQYVGYNQGYSHIQHPSQSVAPTSATANYAYEFSDPAH 742
            TTAP     Q + Q+PT  +QQQ++GY+Q    I+HP QS   ++   NY YE+ D AH
Sbjct: 663 -TTAPGVGGAQMVHQIPT--NQQQFMGYSQ----IRHPPQS--GSAGNPNYGYEYVDNAH 720

[Close]

BLAST of CmUC05G103580.1 vs. TAIR 10
Match: AT3G18230.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 306.6 bits (784), Expect = 5.4e-83
Identity = 291/749 (38.85%), Postives = 392/749 (52.34%), Query Frame = 0


Query: 31  LPPPHAMT-EPPPPPPTQPLPPAVSPHLNYPESLDSSPRSRNTDTW--DEPLAPGPLAGR 90
           LPP   +T  P P        PA    +   + +D SPR+  TDT    EPLA  P   +
Sbjct: 5   LPPLSQLTPNPTPAAAVSSAIPAPVKSVAVQQPIDGSPRAVATDTGGIPEPLAAVP-GAK 64

Query: 91  LRLMCSYGGHIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQ 150
           LRLMCS+GGHI+PRPHDK+L Y  GETRIVVVDR  SLS L +RLS  LLNGR FTLKYQ
Sbjct: 65  LRLMCSFGGHIMPRPHDKSLTYSGGETRIVVVDRRASLSSLRSRLSSMLLNGRSFTLKYQ 124

Query: 151 LPNEDLDSLISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPTKPDVSQSIGPI 210
           LP+EDLDSL+++TTDEDLENMI+EYDR AS+++  A    RLRLFLF  K + + ++G +
Sbjct: 125 LPSEDLDSLVTITTDEDLENMIEEYDRAASSAT--ATATQRLRLFLFANKLETAATMGSL 184

Query: 211 LESSTSSDDWFLNALNGAGLLNRGFSDSASV-NCLLGLDDDVG----VNNLDSGPREADG 270
           L+  T SD WF++ALN +GLL RG SDSA+V N L+ LD+  G    + NL++     + 
Sbjct: 185 LD-GTKSDTWFVDALNQSGLLPRGLSDSAAVNNTLVNLDEASGGETEIQNLETNVGGENN 244

Query: 271 SQPGSFGNGKGGKQDVH--SVPDSPMIETS-SSFGSTSSSPSLANLPPIRVHVEDSGNSG 330
            +     NG    Q++H  S+PDSPM+E + SS GS+SSSPS +NLPPIRV V       
Sbjct: 245 KRGDLVANGVISHQEMHMSSMPDSPMMEAAGSSIGSSSSSPSTSNLPPIRVRVS------ 304

Query: 331 GVSAGAVRVQDQKVGIEEQFSQMSVG----QKQQDEAFTALSSPPPLPTTIVASAAGSAI 390
                    +DQ+  IEEQ +QM+      Q+Q D+  + +++ P +      + A  A 
Sbjct: 305 ---------EDQR--IEEQLAQMTFSNMQTQRQFDDGVSLMANRPMMIPPGAMNDAAMAY 364

Query: 391 PVSSAAGVVVGEYINRVISDDERSDHGAPVGYRK-PLPPQPQSLAPQLQQKSSGLVDVPS 450
             +   G         V  +D+RS+ G   GYRK PLP QP ++ P    ++ G   + S
Sbjct: 365 NNAPGDGTAPASN-GHVSPEDDRSELGVSTGYRKPPLPMQPVTIPP----RTVGGYGLTS 424

Query: 451 PDSVSSDSSLNNPMSRSKPVMYQEQVVHQIPSSAVRLPGSPADPKVNISDQNARVHIPQQ 510
           PDSV+SD+S+++  S SKP+ YQ+Q     P +  R P  P       S Q+++V +PQ 
Sbjct: 425 PDSVASDTSISSATSFSKPMYYQDQ-----PPALPRAP--PVAQPETTSAQSSQV-LPQT 484

Query: 511 VQESGYVLHSQYDQHQHQQLQQQQQQQQQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFF 570
              S         Q        QQQQQ    P   Q F+H G  YI  HPS       + 
Sbjct: 485 ENTSAQTTSHVLSQPGTYTTMDQQQQQ----PLAQQPFLHQGVQYI-PHPS------QYI 544

Query: 571 PVYSPQHHHHPHQMEQQYPVYYMPARQGQAYGNLPVQQSTISESGTALPPGRPQTPPNPT 630
           P+YS Q        +Q YPVY M   Q Q Y                +P G P   PN  
Sbjct: 545 PIYSHQ--------QQNYPVYVMSVPQSQQY----------------IPAGTPPLYPNSK 604

Query: 631 LVTTAAYNHMRNAPIAKTEMAANAYKQTTTAPQSLVQVPTSQHQQQYVGYNQGYSHIQHP 690
             T            ++ E A N Y+    AP  ++Q+   Q Q QY+GY     H  + 
Sbjct: 605 PGTN-----------SRPEAAQNVYR---AAPPQVIQL---QQQHQYMGYAGAPQHSTNA 664

Query: 691 SQSV---AP---TSATANYA--YEFSDPAHSQIYY-TQ--------PLAPSQYQAM--PA 742
           + +    AP   T+A ANY   +E+++  +  +YY TQ        PLA S YQ+M   A
Sbjct: 665 NANYGTGAPQHSTNANANYGGPFEYTNSPNETVYYHTQAPAANTAIPLA-SPYQSMTPAA 666

[Close]

BLAST of CmUC05G103580.1 vs. TAIR 10
Match: AT4G05150.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 143.3 bits (360), Expect = 7.9e-34
Identity = 111/275 (40.36%), Postives = 150/275 (54.55%), Query Frame = 0


Query: 61  ESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGGHIVPRPHDKTLCYVCGETRIVVVD 120
           +SL SSPRS       +P        R+R MC++GG I+PRP D  LCYV G+ R+V V 
Sbjct: 43  DSLASSPRSEYD---SQP--------RVRFMCTFGGRILPRPPDNQLCYVGGDNRMVAVH 102

Query: 121 RHTSLSDLTARLSKTLLNGRP-FTLKYQLPNEDLDSLISVTTDEDLENMIDEYDRTASNS 180
           RHT+ + L ++L+K  L+G+   ++KYQLPNEDLD+LISV+TDED+ENM+DEYDR A N 
Sbjct: 103 RHTTFASLLSKLAK--LSGKSNISVKYQLPNEDLDALISVSTDEDVENMMDEYDRVAQN- 162

Query: 181 SNPAAKPSRLRLFLF-------PTKPDVSQSIGPILESSTSSDDWFLNALN-GAGLLNRG 240
            NP A  SRLRLFLF             + SI  +L+SS + + WFL+ALN G+      
Sbjct: 163 QNPRA--SRLRLFLFTKNVAGEEDNDSRASSISSLLDSSVNREQWFLDALNLGSSAAATA 222

Query: 241 FSDSASVNCLLGLDDDV------------GVNNLD--SGPREADGSQPGSFGNGKGGKQ- 300
            S+  S      +  +V            G++N D  + P E     P      K  ++ 
Sbjct: 223 VSNGGSGRVFERVRSEVSSIVSEVPDYLFGLDNFDETAPPHELRDRDP----RAKIQREV 282

Query: 301 DVHSVPDSPMIETSSSFGSTSSSP----SLANLPP 308
              S P SP  +  S +GSTSS+P    S   LPP
Sbjct: 283 STLSDPGSPRRDVPSPYGSTSSAPVMRISTPELPP 297

[Close]

BLAST of CmUC05G103580.1 vs. TAIR 10
Match: AT5G09620.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 131.0 bits (328), Expect = 4.1e-30
Identity = 81/173 (46.82%), Postives = 105/173 (60.69%), Query Frame = 0


Query: 58  NYPESLDSSPRSR-----NTDTWDEPLAPGPLAGRLRLMCSYGGHIVPRPHDKTLCYVCG 117
           +YP+S +SSPRSR     N   W++         +++LMCSYGG I PRPHD  L YV G
Sbjct: 8   SYPDSAESSPRSRDVEFENPSPWEDQQQQN---YKVKLMCSYGGKIQPRPHDNQLTYVNG 67

Query: 118 ETRIVVVDRHTSLSDLTARLSKTLL---NGRPFTLKYQLPNEDLDSLISVTTDEDLENMI 177
           +T+I+ VDR      L ++LS       +G   + KYQLP EDLD+LISVT DEDLE+M+
Sbjct: 68  DTKIMSVDRGIRFPALVSKLSAVCSGGGDGGEISFKYQLPGEDLDALISVTNDEDLEHMM 127

Query: 178 DEYDRTASNSSNPAAKPSRLRLFLFPTKPDVSQSIGPILESSTSSDDWFLNAL 223
            EYDR    S+    KP+R+RLFLFP+ P +S   G   E ST SD   LN +
Sbjct: 128 HEYDRLLRLST----KPARMRLFLFPSSP-ISGGFGS--EGSTKSDRDTLNPI 170

[Close]

BLAST of CmUC05G103580.1 vs. TAIR 10
Match: AT5G64430.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 129.8 bits (325), Expect = 9.1e-30
Identity = 86/179 (48.04%), Postives = 106/179 (59.22%), Query Frame = 0


Query: 58  NYPESLDSSPRSRNTDTWDEPLAP--------GPLAGRLRLMCSYGGHIVPRPHDKTLCY 117
           +YP+S DSSPRSR  + +D P  P           + +++ MCSYGG I PRPHD  L Y
Sbjct: 8   SYPDSTDSSPRSREIE-FDNPPPPWDDQNQNQQQHSYKVKFMCSYGGKIQPRPHDNQLTY 67

Query: 118 VCGETRIVVVDRHTSLSDLTARLSKTL----LNGRPFTLKYQLPNEDLDSLISVTTDEDL 177
           V GET+I+ VDR      L ++LS         G   T KYQLP EDLD+LISVT D+DL
Sbjct: 68  VNGETKILSVDRGIRFPVLASKLSTVCGGGDGGGGEVTFKYQLPGEDLDALISVTNDDDL 127

Query: 178 ENMIDEYDRTASNSSNPAAKPSRLRLFLFPTKPDVSQSIGPILESSTSSD-DWFLNALN 224
           E+M+ EYDR    SS    KP+R+RLFLFP       S G   +SST SD D F+ ALN
Sbjct: 128 EHMMHEYDRLLRLSS----KPARMRLFLFPA------SSGFGSQSSTQSDRDRFVEALN 175

The following BLAST results are available for this feature:

BLAST of CmUC05G103580.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892018.1	0.0e+00	96.62	putative mediator of RNA polymerase II transcription subunit 12 [Benincasa hispi...	[more]
XP_004135079.1	0.0e+00	95.34	RNA polymerase II degradation factor 1 [Cucumis sativus] >KGN52111.1 hypothetica...	[more]
XP_008446641.1	0.0e+00	95.19	PREDICTED: RNA polymerase II degradation factor 1 [Cucumis melo] >KAA0034588.1 R...	[more]
XP_022956700.1	0.0e+00	90.42	putative uncharacterized protein DDB_G0268364 isoform X2 [Cucurbita moschata]	[more]
XP_022966093.1	0.0e+00	88.23	RNA polymerase II degradation factor 1-like [Cucurbita maxima]	[more]

BLAST of CmUC05G103580.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC05G103580.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWH3	0.0e+00	95.34	PB1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G610450 PE=4 SV...	[more]
A0A5A7SVC4	0.0e+00	95.19	RNA polymerase II degradation factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3BF26	0.0e+00	95.19	RNA polymerase II degradation factor 1 OS=Cucumis melo OX=3656 GN=LOC103489312 P...	[more]
A0A6J1GYH7	0.0e+00	90.42	PB1 domain-containing protein OS=Cucurbita moschata OX=3662 GN=LOC111458340 PE=4...	[more]
A0A6J1HQW4	0.0e+00	88.23	RNA polymerase II degradation factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of CmUC05G103580.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01190.1	9.0e-155	49.22	Octicosapeptide/Phox/Bem1p family protein	[more]
AT3G18230.1	5.4e-83	38.85	Octicosapeptide/Phox/Bem1p family protein	[more]
AT4G05150.1	7.9e-34	40.36	Octicosapeptide/Phox/Bem1p family protein	[more]
AT5G09620.1	4.1e-30	46.82	Octicosapeptide/Phox/Bem1p family protein	[more]
AT5G64430.1	9.1e-30	48.04	Octicosapeptide/Phox/Bem1p family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 741..741
None	No IPR available	GENE3D	3.10.20.90		coord: 105..195 e-value: 1.2E-10 score: 43.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 283..304
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 418..450
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 506..529
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 252..322
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 395..450
None	No IPR available	PANTHER	PTHR31066	OS05G0427100 PROTEIN-RELATED	coord: 46..730
None	No IPR available	PANTHER	PTHR31066:SF27	EXPRESSED PROTEIN	coord: 46..730
None	No IPR available	CDD	cd06410	PB1_UP2	coord: 91..194 e-value: 8.3952E-48 score: 162.004
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 103..204
IPR000270	PB1 domain	SMART	SM00666	PB1_new	coord: 102..196 e-value: 1.4E-29 score: 114.2
IPR000270	PB1 domain	PFAM	PF00564	PB1	coord: 105..195 e-value: 3.2E-17 score: 62.2
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 87..196 score: 13.458899

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmUC05G103580	CmUC05G103580	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC05G103580.1-exon	CmUC05G103580.1-exon-CmU531Chr05:32366701..32366762	exon
CmUC05G103580.1-exon	CmUC05G103580.1-exon-CmU531Chr05:32367153..32368409	exon
CmUC05G103580.1-exon	CmUC05G103580.1-exon-CmU531Chr05:32368556..32370153	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC05G103580.1-cds	CmUC05G103580.1-cds-CmU531Chr05:32366701..32366762	CDS
CmUC05G103580.1-cds	CmUC05G103580.1-cds-CmU531Chr05:32367153..32368409	CDS
CmUC05G103580.1-cds	CmUC05G103580.1-cds-CmU531Chr05:32368556..32369462	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC05G103580.1-three_prime_utr	CmUC05G103580.1-three_prime_utr-CmU531Chr05:32369463..32370153	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmUC05G103580.1	CmUC05G103580.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006414	translational elongation
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003746	translation elongation factor activity