CmUC05G095270.1 (mRNA) Watermelon (USVL531) v1

Overview


Name	CmUC05G095270.1
Type	mRNA
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	cilia- and flagella-associated protein 20
Location	CmU531Chr05: 21953491 .. 21955799 (-)
Sequence length	856
RNA-Seq Expression	CmUC05G095270.1
Synteny	CmUC05G095270.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTAAATACTTCGAGGTTTATCATTAGGGTTTTGCTGGGGATTTTATGATCTTTCTATGGTTTCTGATGAAAAAGAAAGAAGAAAGAACTATTACAGGCAAGATTGCTTTTTCTTTACATATAATATAAGATAAGACGCTTCTGATTACATTGCAGCCTGCGGAGTGTAGCTGCTGACTGTCTTAAAATGTTCAAAAATACGTTTCAGTCCGGATTTCTCTCTATATTATTCAGCCTTGGGTATGTTTAGATGTTTTGAAGCCAGTGCTTACGGTCTGTCAGATATGTTGCTTTTTAAATTCGTAGGACTCATGATTTCTTCTGTTATTTTATATTTGTGTTCTTTTTTGTAGGAGCAAACCTCTCCAGATATGGGATAAAGAAAGTGAGTGTTTTCACAATCAGAATAGGGTTTTTGTTTTGCATTTGATTAAAGATTCTCTTGTCTGTTTGGTTTGTTTGGTGTTTGAGAACACGGCTATTGTGTTCTTGAATGGTTTGAAAGTAGGGGTATTGCTAGGGTGGGGGCAAAGATGGCTTCTCTGTCCCCGGTCCTGATTGTTCACTATACTGTCCTTGTTTATTGCCAACATGAGTATAACTCGGTTAAAACATCTGCTCCCCTCATTTCTGACGTCAACATTTCTACCCTTGACGTCAGAAATTTCATCACCTCTACCTTTGTTGTCCTAAAAGATTATTTATGTTAGGTCAGGTGGAGCCACTGAACTATATCCTATAAAATCTAGAATGCTAAATGAGAATTGTCATAACTTCTTTTCGAGGTTTGTTTGTGCAAGTCAAGTGCACAGCTTGCATCAACGAGAAGCTTTTCTTTTTCGGCTCTCATGTTCATTATAGCAAAAATTTCCCAACTGTTACATATCATTTCATATTGGAATTTGAAGGGATTATGTTTCAGAAATAAAGTGTTGTAATAGAGTTGATATGGATATGTGCTACACTATTTCAAGTTTTGACCAAATTGTTTAAATTATGGCTGATGAAGAATATTACTCTAGTAGTCTACTTAGACTTGTATTCCATTATTTTGAAATTCTGGCAACATCTGCCACTCATGTTCTTGTGGTTAATGTCTTGTAGCTGCGTTTGGGATTGTAAAGCTTTTATAAGATTATACCAATGGAGCAAGGGCATCAATGTTGAAAATCTTCTAGTTTTACTTTGAGTTTCTAGAGCTGAAGGAATAGTGTTACCTACTTTAAAAGAATTGTTATGGTTATGATCTTGTACCTTTTCTTTTTCTTTTTTTTTTGGTTGGCAGTTTCTAATGGCCACATCAAACGCCCTCAGGATGAAGACATCCAATCAAACGTTATTGATATTGTTGGATCAAAAATTCAGTATACTTATATAACATGCCCAGCGGACCCAGCTTTTACACTGGGTATAAAATTGCTATTCTTAGCTATAATCTAGAAGAATCTTAAGAAATATTTTACTTTTGAGATTCAAGTTTTGGATGATAAGAATGTCAGACGGAGCTTTCGAGCTTCTAACTTTCAAGTGTGTAAGTTTACCTTTATTTAGCTGCTGTTACTGAGGCTCTTTTTCTCTCTCGGCAGACACACTCATGCACGAGTACCACCCCTTCAAATATAACAACTATTCGGTTATTGAAGGACTTCAGTTACTATTGTATCTATTCATAGGTCATATTATTTATTTGTTTTATTATTTTTTTAAAAATGGGTGATATTGTTACCGTGTCAACCAACATAGCTTAACTTAAGAGTCATGAAAATAATAAAAGGCTTAGATTAAATAAGATTAAGTCATGGTGGTTATCTACCTAAATATTCTACGATTTTGTTTTTTTTTTTTTTGACAATCAAATGTAGTAGAGTCAAGCGGTTGTCTTGTGAGAATAGTTGAGGGGTACACAATTTAGTTTGGACACTCACAATTTTAGGAAAATAAAATAACAAAAACAAAAATGTTTTGAGTGATATCGTGGTTCACATCGATGTAGAATTTGTATCCTTGGTCTTAGAGAATGTCGTTGCTAATGCGATTAACTCAGTAATTTTATGAGTATGATGATAGATGATGACAACATCTCTTCTATTATGTTCTTATAGAAAAAAGACAATATCTCTTCTATTATGTAGGCTATCACTAGAATTAAGCCATATATCTGCACCATGCCTCTTAGGATGGACGATGGTTGGAACCATATCCAGCTAAATCTGGCCGACTTTACAAGGAAAGCATATGGAACGAATTATGTCGAGACGTTGCAAGTTCAGGTACATGCGTTGCCGCTTGAGAAGGATTTATTTTGCTGA

mRNA sequence

CGTAAATACTTCGAGGTTTATCATTAGGGTTTTGCTGGGGATTTTATGATCTTTCTATGGTTTCTGATGAAAAAGAAAGAAGAAAGAACTATTACAGGCAAGATTGCTTTTTCTTTACATATAATATAAGATAAGACGCTTCTGATTACATTGCAGCCTGCGGAGTGTAGCTGCTGACTGTCTTAAAATGTTCAAAAATACGTTTCAGTCCGGATTTCTCTCTATATTATTCAGCCTTGGGAGCAAACCTCTCCAGATATGGGATAAAGAAAGTGAGTGTTTTCACAATCAGAATAGGGTTTTTGTTTTGCATTTGATTAAAGATTCTCTTGTCTGTTTGGTTTGTTTGGTGTTTGAGAACACGGCTATTGTGTTCTTGAATGGTTTGAAAGTAGGGAATATTACTCTAGTAGTCTACTTAGACTTGTATTCCATTATTTTGAAATTCTGGCAACATCTGCCACTCATGTTCTTGTGGTTAATGTCTTGTAGCTGCGTTTGGGATTTTTCTAATGGCCACATCAAACGCCCTCAGGATGAAGACATCCAATCAAACGTTATTGATATTGTTGGATCAAAAATTCAGTATACTTATATAACATGCCCAGCGGACCCAGCTTTTACACTGGAATTTGTATCCTTGGTCTTAGAGAATGTCGTTGCTAATGCGATTAACTCAGCTATCACTAGAATTAAGCCATATATCTGCACCATGCCTCTTAGGATGGACGATGGTTGGAACCATATCCAGCTAAATCTGGCCGACTTTACAAGGAAAGCATATGGAACGAATTATGTCGAGACGTTGCAAGTTCAGGTACATGCGTTGCCGCTTGAGAAGGATTTATTTTGCTGA

Coding sequence (CDS)

ATGTTCAAAAATACGTTTCAGTCCGGATTTCTCTCTATATTATTCAGCCTTGGGAGCAAACCTCTCCAGATATGGGATAAAGAAAGTGAGTGTTTTCACAATCAGAATAGGGTTTTTGTTTTGCATTTGATTAAAGATTCTCTTGTCTGTTTGGTTTGTTTGGTGTTTGAGAACACGGCTATTGTGTTCTTGAATGGTTTGAAAGTAGGGAATATTACTCTAGTAGTCTACTTAGACTTGTATTCCATTATTTTGAAATTCTGGCAACATCTGCCACTCATGTTCTTGTGGTTAATGTCTTGTAGCTGCGTTTGGGATTTTTCTAATGGCCACATCAAACGCCCTCAGGATGAAGACATCCAATCAAACGTTATTGATATTGTTGGATCAAAAATTCAGTATACTTATATAACATGCCCAGCGGACCCAGCTTTTACACTGGAATTTGTATCCTTGGTCTTAGAGAATGTCGTTGCTAATGCGATTAACTCAGCTATCACTAGAATTAAGCCATATATCTGCACCATGCCTCTTAGGATGGACGATGGTTGGAACCATATCCAGCTAAATCTGGCCGACTTTACAAGGAAAGCATATGGAACGAATTATGTCGAGACGTTGCAAGTTCAGGTACATGCGTTGCCGCTTGAGAAGGATTTATTTTGCTGA

Protein sequence

MFKNTFQSGFLSILFSLGSKPLQIWDKESECFHNQNRVFVLHLIKDSLVCLVCLVFENTAIVFLNGLKVGNITLVVYLDLYSIILKFWQHLPLMFLWLMSCSCVWDFSNGHIKRPQDEDIQSNVIDIVGSKIQYTYITCPADPAFTLEFVSLVLENVVANAINSAITRIKPYICTMPLRMDDGWNHIQLNLADFTRKAYGTNYVETLQVQVHALPLEKDLFC

Homology

[Close]

BLAST of CmUC05G095270.1 vs. NCBI nr
Match: XP_008446984.1 (PREDICTED: cilia- and flagella-associated protein 20 isoform X1 [Cucumis melo])

HSP 1 Score: 193.7 bits (491), Expect = 1.6e-45
Identity = 115/236 (48.73%), Postives = 129/236 (54.66%), Query Frame = 0


Query: 1   MFKNTFQSGFLSILFSLGSKPLQIWDKESECFHNQNRVFVLHLIKDSLVCLVCLVFENTA 60
           MFKNTFQSGFLSILFSLGSKPLQIWDKE E F                            
Sbjct: 1   MFKNTFQSGFLSILFSLGSKPLQIWDKEGEYFR--------------------------- 60

Query: 61  IVFLNGLKVGNITLVVYLDLYSIILKFWQHLPLMFLWLMSCSCVWDFSNGHIKRPQDEDI 120
                                                       +  SNGHIKRPQDEDI
Sbjct: 61  --------------------------------------------YRVSNGHIKRPQDEDI 120

Query: 121 QSNVIDIVGSKIQYTYITCPADPAFT----LEFVSLVLENV---------VANAIN---- 180
           QSNV++IVGSKIQ TYITCPADPA T    L F+ ++++N+         V +  N    
Sbjct: 121 QSNVLEIVGSKIQATYITCPADPASTLGIKLPFLVIIVKNLNKYFTFEIQVLDDKNVRRR 165

Query: 181 ------SAITRIKPYICTMPLRMDDGWNHIQLNLADFTRKAYGTNYVETLQVQVHA 214
                  AITR+KPYICTMPLRMD+GWNHIQLNLADFTR+AYGTNYVETL+VQVHA
Sbjct: 181 FRASNFQAITRVKPYICTMPLRMDEGWNHIQLNLADFTRRAYGTNYVETLRVQVHA 165

[Close]

BLAST of CmUC05G095270.1 vs. NCBI nr
Match: XP_004142379.1 (cilia- and flagella-associated protein 20 [Cucumis sativus] >XP_008446985.1 PREDICTED: cilia- and flagella-associated protein 20 isoform X2 [Cucumis melo] >KAE8648874.1 hypothetical protein Csa_009426 [Cucumis sativus])

HSP 1 Score: 187.2 bits (474), Expect = 1.5e-43
Identity = 113/236 (47.88%), Postives = 126/236 (53.39%), Query Frame = 0


Query: 1   MFKNTFQSGFLSILFSLGSKPLQIWDKESECFHNQNRVFVLHLIKDSLVCLVCLVFENTA 60
           MFKNTFQSGFLSILFSLGSKPLQIWDKE                                
Sbjct: 1   MFKNTFQSGFLSILFSLGSKPLQIWDKE-------------------------------- 60

Query: 61  IVFLNGLKVGNITLVVYLDLYSIILKFWQHLPLMFLWLMSCSCVWDFSNGHIKRPQDEDI 120
                                                          SNGHIKRPQDEDI
Sbjct: 61  ----------------------------------------------VSNGHIKRPQDEDI 120

Query: 121 QSNVIDIVGSKIQYTYITCPADPAFT----LEFVSLVLENV---------VANAIN---- 180
           QSNV++IVGSKIQ TYITCPADPA T    L F+ ++++N+         V +  N    
Sbjct: 121 QSNVLEIVGSKIQATYITCPADPASTLGIKLPFLVIIVKNLNKYFTFEIQVLDDKNVRRR 158

Query: 181 ------SAITRIKPYICTMPLRMDDGWNHIQLNLADFTRKAYGTNYVETLQVQVHA 214
                  AITR+KPYICTMPLRMD+GWNHIQLNLADFTR+AYGTNYVETL+VQVHA
Sbjct: 181 FRASNFQAITRVKPYICTMPLRMDEGWNHIQLNLADFTRRAYGTNYVETLRVQVHA 158

[Close]

BLAST of CmUC05G095270.1 vs. NCBI nr
Match: XP_022139282.1 (cilia- and flagella-associated protein 20 isoform X1 [Momordica charantia])

HSP 1 Score: 187.2 bits (474), Expect = 1.5e-43
Identity = 112/236 (47.46%), Postives = 126/236 (53.39%), Query Frame = 0


Query: 1   MFKNTFQSGFLSILFSLGSKPLQIWDKESECFHNQNRVFVLHLIKDSLVCLVCLVFENTA 60
           MFKNTFQSGFLSIL+SLGSKPLQIWDKE+                               
Sbjct: 1   MFKNTFQSGFLSILYSLGSKPLQIWDKEA------------------------------- 60

Query: 61  IVFLNGLKVGNITLVVYLDLYSIILKFWQHLPLMFLWLMSCSCVWDFSNGHIKRPQDEDI 120
                                                          SNGHIKRPQDEDI
Sbjct: 61  ----------------------------------------------VSNGHIKRPQDEDI 120

Query: 121 QSNVIDIVGSKIQYTYITCPADPAFT----LEFVSLVLENVVA----------------- 180
           QSNV++IVGSKIQ TYITCPADPA T    L F+ ++++N+                   
Sbjct: 121 QSNVLEIVGSKIQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRR 159

Query: 181 -NAIN-SAITRIKPYICTMPLRMDDGWNHIQLNLADFTRKAYGTNYVETLQVQVHA 214
             A N  AITR+KPYICTMPLRMD+GWNHIQLNLADFTR+AYGTNYVETL+VQVHA
Sbjct: 181 FRASNFQAITRVKPYICTMPLRMDEGWNHIQLNLADFTRRAYGTNYVETLRVQVHA 159

[Close]

BLAST of CmUC05G095270.1 vs. NCBI nr
Match: EMS52994.1 (hypothetical protein TRIUR3_25526 [Triticum urartu])

HSP 1 Score: 186.0 bits (471), Expect = 3.4e-43
Identity = 103/217 (47.47%), Postives = 131/217 (60.37%), Query Frame = 0


Query: 1   MFKNTFQSGFLSILFSLGSKPLQIWDKESECFHNQNRVFVLHLIKDSLVCLVCLVFENTA 60
           MFKNTFQSGFLSIL+SLG+KPLQIWDKE EC +                           
Sbjct: 20  MFKNTFQSGFLSILYSLGTKPLQIWDKE-ECRY--------------------------- 79

Query: 61  IVFLNGLKVGNITLVVYLDLYSIILKFWQHLPLMFLWLMSCSCVWDFSNGHIKRPQDEDI 120
                    GN+   + L   +++                        +GHIKRPQDEDI
Sbjct: 80  ------FSPGNLKHYLLLTAKAVV------------------------DGHIKRPQDEDI 139

Query: 121 QSNVIDIVGSKIQYTYITCPADPAFT----LEFVSLVLENVVANAINSAITRIKPYICTM 180
           +SNV++IVG+ +Q TYITCPADPA T    L F++LV++N+       ++TR+KPYICTM
Sbjct: 140 KSNVLEIVGTNVQSTYITCPADPAATLGIKLPFLALVVKNLKKYFTFESVTRVKPYICTM 178

Query: 181 PLRMDDGWNHIQLNLADFTRKAYGTNYVETLQVQVHA 214
           PL++DDGWN+IQLNL D T++AYGTNYVETL+VQVHA
Sbjct: 200 PLKLDDGWNNIQLNLTDLTKRAYGTNYVETLRVQVHA 178

[Close]

BLAST of CmUC05G095270.1 vs. NCBI nr
Match: XP_022139283.1 (cilia- and flagella-associated protein 20 isoform X2 [Momordica charantia])

HSP 1 Score: 186.0 bits (471), Expect = 3.4e-43
Identity = 112/236 (47.46%), Postives = 125/236 (52.97%), Query Frame = 0


Query: 1   MFKNTFQSGFLSILFSLGSKPLQIWDKESECFHNQNRVFVLHLIKDSLVCLVCLVFENTA 60
           MFKNTFQSGFLSIL+SLGSKPLQIWDKE                                
Sbjct: 1   MFKNTFQSGFLSILYSLGSKPLQIWDKE-------------------------------- 60

Query: 61  IVFLNGLKVGNITLVVYLDLYSIILKFWQHLPLMFLWLMSCSCVWDFSNGHIKRPQDEDI 120
                                                          SNGHIKRPQDEDI
Sbjct: 61  ----------------------------------------------VSNGHIKRPQDEDI 120

Query: 121 QSNVIDIVGSKIQYTYITCPADPAFT----LEFVSLVLENVVA----------------- 180
           QSNV++IVGSKIQ TYITCPADPA T    L F+ ++++N+                   
Sbjct: 121 QSNVLEIVGSKIQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRR 158

Query: 181 -NAIN-SAITRIKPYICTMPLRMDDGWNHIQLNLADFTRKAYGTNYVETLQVQVHA 214
             A N  AITR+KPYICTMPLRMD+GWNHIQLNLADFTR+AYGTNYVETL+VQVHA
Sbjct: 181 FRASNFQAITRVKPYICTMPLRMDEGWNHIQLNLADFTRRAYGTNYVETLRVQVHA 158

[Close]

BLAST of CmUC05G095270.1 vs. ExPASy Swiss-Prot
Match: Q6B857 (Cilia- and flagella-associated protein 20 OS=Bos taurus OX=9913 GN=CFAP20 PE=2 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 6.1e-35
Identity = 90/236 (38.14%), Postives = 113/236 (47.88%), Query Frame = 0


Query: 1   MFKNTFQSGFLSILFSLGSKPLQIWDKESECFHNQNRVFVLHLIKDSLVCLVCLVFENTA 60
           MFKNTFQSGFLSIL+S+GSKPLQIWDK+                                
Sbjct: 1   MFKNTFQSGFLSILYSIGSKPLQIWDKK-------------------------------- 60

Query: 61  IVFLNGLKVGNITLVVYLDLYSIILKFWQHLPLMFLWLMSCSCVWDFSNGHIKRPQDEDI 120
                                                           NGHIKR  D DI
Sbjct: 61  ----------------------------------------------VRNGHIKRITDNDI 120

Query: 121 QSNVIDIVGSKIQYTYITCPADPAFT----LEFVSLVLENVVA----------------- 180
           QS V++I G+ +  TYITCPADP  T    L F+ ++++N+                   
Sbjct: 121 QSLVLEIEGTNVSTTYITCPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRR 158

Query: 181 -NAIN-SAITRIKPYICTMPLRMDDGWNHIQLNLADFTRKAYGTNYVETLQVQVHA 214
             A N  + TR+KP+ICTMP+R+DDGWN IQ NL+DFTR+AYGTNY+ETL+VQ+HA
Sbjct: 181 FRASNYQSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHA 158

[Close]

BLAST of CmUC05G095270.1 vs. ExPASy Swiss-Prot
Match: Q8BTU1 (Cilia- and flagella-associated protein 20 OS=Mus musculus OX=10090 GN=Cfap20 PE=1 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 6.1e-35
Identity = 90/236 (38.14%), Postives = 113/236 (47.88%), Query Frame = 0


Query: 1   MFKNTFQSGFLSILFSLGSKPLQIWDKESECFHNQNRVFVLHLIKDSLVCLVCLVFENTA 60
           MFKNTFQSGFLSIL+S+GSKPLQIWDK+                                
Sbjct: 1   MFKNTFQSGFLSILYSIGSKPLQIWDKK-------------------------------- 60

Query: 61  IVFLNGLKVGNITLVVYLDLYSIILKFWQHLPLMFLWLMSCSCVWDFSNGHIKRPQDEDI 120
                                                           NGHIKR  D DI
Sbjct: 61  ----------------------------------------------VRNGHIKRITDNDI 120

Query: 121 QSNVIDIVGSKIQYTYITCPADPAFT----LEFVSLVLENVVA----------------- 180
           QS V++I G+ +  TYITCPADP  T    L F+ ++++N+                   
Sbjct: 121 QSLVLEIEGTNVSTTYITCPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRR 158

Query: 181 -NAIN-SAITRIKPYICTMPLRMDDGWNHIQLNLADFTRKAYGTNYVETLQVQVHA 214
             A N  + TR+KP+ICTMP+R+DDGWN IQ NL+DFTR+AYGTNY+ETL+VQ+HA
Sbjct: 181 FRASNYQSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHA 158

[Close]

BLAST of CmUC05G095270.1 vs. ExPASy Swiss-Prot
Match: Q5ZHP3 (Cilia- and flagella-associated protein 20 OS=Gallus gallus OX=9031 GN=CFAP20 PE=2 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 8.0e-35
Identity = 89/236 (37.71%), Postives = 113/236 (47.88%), Query Frame = 0


Query: 1   MFKNTFQSGFLSILFSLGSKPLQIWDKESECFHNQNRVFVLHLIKDSLVCLVCLVFENTA 60
           MFKNTFQSGFLS+L+S+GSKPLQIWDK+                                
Sbjct: 1   MFKNTFQSGFLSVLYSIGSKPLQIWDKK-------------------------------- 60

Query: 61  IVFLNGLKVGNITLVVYLDLYSIILKFWQHLPLMFLWLMSCSCVWDFSNGHIKRPQDEDI 120
                                                           NGHIKR  D DI
Sbjct: 61  ----------------------------------------------VRNGHIKRITDNDI 120

Query: 121 QSNVIDIVGSKIQYTYITCPADPAFT----LEFVSLVLENVVA----------------- 180
           QS V++I G+ +  TYITCPADP  T    L F+ ++++N+                   
Sbjct: 121 QSLVLEIEGTNVSTTYITCPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRR 158

Query: 181 -NAIN-SAITRIKPYICTMPLRMDDGWNHIQLNLADFTRKAYGTNYVETLQVQVHA 214
             A N  + TR+KP+ICTMP+R+DDGWN IQ NL+DFTR+AYGTNY+ETL+VQ+HA
Sbjct: 181 FRASNYQSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHA 158

[Close]

BLAST of CmUC05G095270.1 vs. ExPASy Swiss-Prot
Match: Q6PBJ2 (Cilia- and flagella-associated protein 20 OS=Danio rerio OX=7955 GN=cfap20 PE=2 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 8.0e-35
Identity = 89/236 (37.71%), Postives = 113/236 (47.88%), Query Frame = 0


Query: 1   MFKNTFQSGFLSILFSLGSKPLQIWDKESECFHNQNRVFVLHLIKDSLVCLVCLVFENTA 60
           MFKNTFQSGFLSIL+S+GSKPLQIWDK+                                
Sbjct: 1   MFKNTFQSGFLSILYSIGSKPLQIWDKK-------------------------------- 60

Query: 61  IVFLNGLKVGNITLVVYLDLYSIILKFWQHLPLMFLWLMSCSCVWDFSNGHIKRPQDEDI 120
                                                           NGHIKR  D DI
Sbjct: 61  ----------------------------------------------VRNGHIKRITDNDI 120

Query: 121 QSNVIDIVGSKIQYTYITCPADPAFT----LEFVSLVLENVVA----------------- 180
           QS V+++ G+ +  TYITCPADP  T    L F+ ++++N+                   
Sbjct: 121 QSLVLEVEGTNVSTTYITCPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRR 158

Query: 181 -NAIN-SAITRIKPYICTMPLRMDDGWNHIQLNLADFTRKAYGTNYVETLQVQVHA 214
             A N  + TR+KP+ICTMP+R+DDGWN IQ NL+DFTR+AYGTNY+ETL+VQ+HA
Sbjct: 181 FRASNYQSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHA 158

[Close]

BLAST of CmUC05G095270.1 vs. ExPASy Swiss-Prot
Match: Q6GPY6 (Cilia- and flagella-associated protein 20 OS=Xenopus laevis OX=8355 GN=cfap20 PE=2 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 8.0e-35
Identity = 89/236 (37.71%), Postives = 113/236 (47.88%), Query Frame = 0


Query: 1   MFKNTFQSGFLSILFSLGSKPLQIWDKESECFHNQNRVFVLHLIKDSLVCLVCLVFENTA 60
           MFKNTFQSGFLSIL+S+GSKPLQIWDK+                                
Sbjct: 1   MFKNTFQSGFLSILYSIGSKPLQIWDKK-------------------------------- 60

Query: 61  IVFLNGLKVGNITLVVYLDLYSIILKFWQHLPLMFLWLMSCSCVWDFSNGHIKRPQDEDI 120
                                                           NGHIKR  D DI
Sbjct: 61  ----------------------------------------------VRNGHIKRITDNDI 120

Query: 121 QSNVIDIVGSKIQYTYITCPADPAFT----LEFVSLVLENVVA----------------- 180
           QS V+++ G+ +  TYITCPADP  T    L F+ ++++N+                   
Sbjct: 121 QSLVLEVEGTNVSTTYITCPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRR 158

Query: 181 -NAIN-SAITRIKPYICTMPLRMDDGWNHIQLNLADFTRKAYGTNYVETLQVQVHA 214
             A N  + TR+KP+ICTMP+R+DDGWN IQ NL+DFTR+AYGTNY+ETL+VQ+HA
Sbjct: 181 FRASNYQSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHA 158

[Close]

BLAST of CmUC05G095270.1 vs. ExPASy TrEMBL
Match: A0A1S3BGZ6 (cilia- and flagella-associated protein 20 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489531 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 8.0e-46
Identity = 115/236 (48.73%), Postives = 129/236 (54.66%), Query Frame = 0


Query: 1   MFKNTFQSGFLSILFSLGSKPLQIWDKESECFHNQNRVFVLHLIKDSLVCLVCLVFENTA 60
           MFKNTFQSGFLSILFSLGSKPLQIWDKE E F                            
Sbjct: 1   MFKNTFQSGFLSILFSLGSKPLQIWDKEGEYFR--------------------------- 60

Query: 61  IVFLNGLKVGNITLVVYLDLYSIILKFWQHLPLMFLWLMSCSCVWDFSNGHIKRPQDEDI 120
                                                       +  SNGHIKRPQDEDI
Sbjct: 61  --------------------------------------------YRVSNGHIKRPQDEDI 120

Query: 121 QSNVIDIVGSKIQYTYITCPADPAFT----LEFVSLVLENV---------VANAIN---- 180
           QSNV++IVGSKIQ TYITCPADPA T    L F+ ++++N+         V +  N    
Sbjct: 121 QSNVLEIVGSKIQATYITCPADPASTLGIKLPFLVIIVKNLNKYFTFEIQVLDDKNVRRR 165

Query: 181 ------SAITRIKPYICTMPLRMDDGWNHIQLNLADFTRKAYGTNYVETLQVQVHA 214
                  AITR+KPYICTMPLRMD+GWNHIQLNLADFTR+AYGTNYVETL+VQVHA
Sbjct: 181 FRASNFQAITRVKPYICTMPLRMDEGWNHIQLNLADFTRRAYGTNYVETLRVQVHA 165

[Close]

BLAST of CmUC05G095270.1 vs. ExPASy TrEMBL
Match: A0A6J1CDI8 (cilia- and flagella-associated protein 20 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010238 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 7.5e-44
Identity = 112/236 (47.46%), Postives = 126/236 (53.39%), Query Frame = 0


Query: 1   MFKNTFQSGFLSILFSLGSKPLQIWDKESECFHNQNRVFVLHLIKDSLVCLVCLVFENTA 60
           MFKNTFQSGFLSIL+SLGSKPLQIWDKE+                               
Sbjct: 1   MFKNTFQSGFLSILYSLGSKPLQIWDKEA------------------------------- 60

Query: 61  IVFLNGLKVGNITLVVYLDLYSIILKFWQHLPLMFLWLMSCSCVWDFSNGHIKRPQDEDI 120
                                                          SNGHIKRPQDEDI
Sbjct: 61  ----------------------------------------------VSNGHIKRPQDEDI 120

Query: 121 QSNVIDIVGSKIQYTYITCPADPAFT----LEFVSLVLENVVA----------------- 180
           QSNV++IVGSKIQ TYITCPADPA T    L F+ ++++N+                   
Sbjct: 121 QSNVLEIVGSKIQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRR 159

Query: 181 -NAIN-SAITRIKPYICTMPLRMDDGWNHIQLNLADFTRKAYGTNYVETLQVQVHA 214
             A N  AITR+KPYICTMPLRMD+GWNHIQLNLADFTR+AYGTNYVETL+VQVHA
Sbjct: 181 FRASNFQAITRVKPYICTMPLRMDEGWNHIQLNLADFTRRAYGTNYVETLRVQVHA 159

[Close]

BLAST of CmUC05G095270.1 vs. ExPASy TrEMBL
Match: A0A1S3BH84 (cilia- and flagella-associated protein 20 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489531 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 7.5e-44
Identity = 113/236 (47.88%), Postives = 126/236 (53.39%), Query Frame = 0


Query: 1   MFKNTFQSGFLSILFSLGSKPLQIWDKESECFHNQNRVFVLHLIKDSLVCLVCLVFENTA 60
           MFKNTFQSGFLSILFSLGSKPLQIWDKE                                
Sbjct: 1   MFKNTFQSGFLSILFSLGSKPLQIWDKE-------------------------------- 60

Query: 61  IVFLNGLKVGNITLVVYLDLYSIILKFWQHLPLMFLWLMSCSCVWDFSNGHIKRPQDEDI 120
                                                          SNGHIKRPQDEDI
Sbjct: 61  ----------------------------------------------VSNGHIKRPQDEDI 120

Query: 121 QSNVIDIVGSKIQYTYITCPADPAFT----LEFVSLVLENV---------VANAIN---- 180
           QSNV++IVGSKIQ TYITCPADPA T    L F+ ++++N+         V +  N    
Sbjct: 121 QSNVLEIVGSKIQATYITCPADPASTLGIKLPFLVIIVKNLNKYFTFEIQVLDDKNVRRR 158

Query: 181 ------SAITRIKPYICTMPLRMDDGWNHIQLNLADFTRKAYGTNYVETLQVQVHA 214
                  AITR+KPYICTMPLRMD+GWNHIQLNLADFTR+AYGTNYVETL+VQVHA
Sbjct: 181 FRASNFQAITRVKPYICTMPLRMDEGWNHIQLNLADFTRRAYGTNYVETLRVQVHA 158

[Close]

BLAST of CmUC05G095270.1 vs. ExPASy TrEMBL
Match: M7ZXZ5 (Uncharacterized protein OS=Triticum urartu OX=4572 GN=TRIUR3_25526 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 1.7e-43
Identity = 103/217 (47.47%), Postives = 131/217 (60.37%), Query Frame = 0


Query: 1   MFKNTFQSGFLSILFSLGSKPLQIWDKESECFHNQNRVFVLHLIKDSLVCLVCLVFENTA 60
           MFKNTFQSGFLSIL+SLG+KPLQIWDKE EC +                           
Sbjct: 20  MFKNTFQSGFLSILYSLGTKPLQIWDKE-ECRY--------------------------- 79

Query: 61  IVFLNGLKVGNITLVVYLDLYSIILKFWQHLPLMFLWLMSCSCVWDFSNGHIKRPQDEDI 120
                    GN+   + L   +++                        +GHIKRPQDEDI
Sbjct: 80  ------FSPGNLKHYLLLTAKAVV------------------------DGHIKRPQDEDI 139

Query: 121 QSNVIDIVGSKIQYTYITCPADPAFT----LEFVSLVLENVVANAINSAITRIKPYICTM 180
           +SNV++IVG+ +Q TYITCPADPA T    L F++LV++N+       ++TR+KPYICTM
Sbjct: 140 KSNVLEIVGTNVQSTYITCPADPAATLGIKLPFLALVVKNLKKYFTFESVTRVKPYICTM 178

Query: 181 PLRMDDGWNHIQLNLADFTRKAYGTNYVETLQVQVHA 214
           PL++DDGWN+IQLNL D T++AYGTNYVETL+VQVHA
Sbjct: 200 PLKLDDGWNNIQLNLTDLTKRAYGTNYVETLRVQVHA 178

[Close]

BLAST of CmUC05G095270.1 vs. ExPASy TrEMBL
Match: A0A446T8B6 (Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_5Av1G170870 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 1.7e-43
Identity = 103/217 (47.47%), Postives = 131/217 (60.37%), Query Frame = 0


Query: 1   MFKNTFQSGFLSILFSLGSKPLQIWDKESECFHNQNRVFVLHLIKDSLVCLVCLVFENTA 60
           MFKNTFQSGFLSIL+SLG+KPLQIWDKE EC +                           
Sbjct: 1   MFKNTFQSGFLSILYSLGTKPLQIWDKE-ECRY--------------------------- 60

Query: 61  IVFLNGLKVGNITLVVYLDLYSIILKFWQHLPLMFLWLMSCSCVWDFSNGHIKRPQDEDI 120
                    GN+   + L   +++                        +GHIKRPQDEDI
Sbjct: 61  ------FSPGNLKHYLLLTAKAVV------------------------DGHIKRPQDEDI 120

Query: 121 QSNVIDIVGSKIQYTYITCPADPAFT----LEFVSLVLENVVANAINSAITRIKPYICTM 180
           +SNV++IVG+ +Q TYITCPADPA T    L F++LV++N+       ++TR+KPYICTM
Sbjct: 121 KSNVLEIVGTNVQSTYITCPADPAATLGIKLPFLALVVKNLKKYFTFESVTRVKPYICTM 159

Query: 181 PLRMDDGWNHIQLNLADFTRKAYGTNYVETLQVQVHA 214
           PL++DDGWN+IQLNL D T++AYGTNYVETL+VQVHA
Sbjct: 181 PLKLDDGWNNIQLNLTDLTKRAYGTNYVETLRVQVHA 159

[Close]

BLAST of CmUC05G095270.1 vs. TAIR 10
Match: AT3G12300.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF667 (InterPro:IPR007714); Has 373 Blast hits to 371 proteins in 116 species: Archae - 0; Bacteria - 0; Metazoa - 213; Fungi - 4; Plants - 71; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). )

HSP 1 Score: 157.5 bits (397), Expect = 1.2e-38
Identity = 97/236 (41.10%), Postives = 117/236 (49.58%), Query Frame = 0


Query: 1   MFKNTFQSGFLSILFSLGSKPLQIWDKESECFHNQNRVFVLHLIKDSLVCLVCLVFENTA 60
           MFKNTFQSGFLSIL+SLGSKPLQIWDKE                                
Sbjct: 1   MFKNTFQSGFLSILYSLGSKPLQIWDKE-------------------------------- 60

Query: 61  IVFLNGLKVGNITLVVYLDLYSIILKFWQHLPLMFLWLMSCSCVWDFSNGHIKRPQDEDI 120
                                                           +GH+KR  D+DI
Sbjct: 61  ----------------------------------------------VVDGHVKRCHDDDI 120

Query: 121 QSNVIDIVGSKIQYTYITCPADPAFT----LEFVSLVLENVVA----------------- 180
           QSNV+++VGS IQ TYITCPAD + T    L F+ LV++++                   
Sbjct: 121 QSNVLEVVGSNIQSTYITCPADLSATLGIKLPFLVLVVKDMKKYFSFEIQILDDKNVRRR 158

Query: 181 -NAIN-SAITRIKPYICTMPLRMDDGWNHIQLNLADFTRKAYGTNYVETLQVQVHA 214
             A N  A+TR+KPYICTMPL+MD+GWN IQLNLAD TR+AYGTNY ETL+VQ+HA
Sbjct: 181 FRASNFQAVTRVKPYICTMPLKMDEGWNQIQLNLADLTRRAYGTNYAETLRVQIHA 158

The following BLAST results are available for this feature:

BLAST of CmUC05G095270.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446984.1	1.6e-45	48.73	PREDICTED: cilia- and flagella-associated protein 20 isoform X1 [Cucumis melo]	[more]
XP_004142379.1	1.5e-43	47.88	cilia- and flagella-associated protein 20 [Cucumis sativus] >XP_008446985.1 PRED...	[more]
XP_022139282.1	1.5e-43	47.46	cilia- and flagella-associated protein 20 isoform X1 [Momordica charantia]	[more]
EMS52994.1	3.4e-43	47.47	hypothetical protein TRIUR3_25526 [Triticum urartu]	[more]
XP_022139283.1	3.4e-43	47.46	cilia- and flagella-associated protein 20 isoform X2 [Momordica charantia]	[more]

BLAST of CmUC05G095270.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6B857	6.1e-35	38.14	Cilia- and flagella-associated protein 20 OS=Bos taurus OX=9913 GN=CFAP20 PE=2 S...	[more]
Q8BTU1	6.1e-35	38.14	Cilia- and flagella-associated protein 20 OS=Mus musculus OX=10090 GN=Cfap20 PE=...	[more]
Q5ZHP3	8.0e-35	37.71	Cilia- and flagella-associated protein 20 OS=Gallus gallus OX=9031 GN=CFAP20 PE=...	[more]
Q6PBJ2	8.0e-35	37.71	Cilia- and flagella-associated protein 20 OS=Danio rerio OX=7955 GN=cfap20 PE=2 ...	[more]
Q6GPY6	8.0e-35	37.71	Cilia- and flagella-associated protein 20 OS=Xenopus laevis OX=8355 GN=cfap20 PE...	[more]

BLAST of CmUC05G095270.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BGZ6	8.0e-46	48.73	cilia- and flagella-associated protein 20 isoform X1 OS=Cucumis melo OX=3656 GN=...	[more]
A0A6J1CDI8	7.5e-44	47.46	cilia- and flagella-associated protein 20 isoform X1 OS=Momordica charantia OX=3...	[more]
A0A1S3BH84	7.5e-44	47.88	cilia- and flagella-associated protein 20 isoform X2 OS=Cucumis melo OX=3656 GN=...	[more]
M7ZXZ5	1.7e-43	47.47	Uncharacterized protein OS=Triticum urartu OX=4572 GN=TRIUR3_25526 PE=4 SV=1	[more]
A0A446T8B6	1.7e-43	47.47	Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_5Av1G...	[more]

BLAST of CmUC05G095270.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12300.1	1.2e-38	41.10	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007714	CFA20 domain	PFAM	PF05018	DUF667	coord: 107..153 e-value: 7.3E-10 score: 38.9 coord: 166..213 e-value: 9.0E-17 score: 61.4 coord: 1..29 e-value: 9.3E-7 score: 28.8
None	No IPR available	PANTHER	PTHR12458:SF8	CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 20	coord: 165..213 coord: 1..158
IPR040441	Cilia- and flagella-associated protein 20/CFAP20DC	PANTHER	PTHR12458	ORF PROTEIN	coord: 165..213 coord: 1..158

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmUC05G095270	CmUC05G095270	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC05G095270.1-exon	CmUC05G095270.1-exon-CmU531Chr05:21953491..21953667	exon
CmUC05G095270.1-exon	CmUC05G095270.1-exon-CmU531Chr05:21953757..21953806	exon
CmUC05G095270.1-exon	CmUC05G095270.1-exon-CmU531Chr05:21954392..21954514	exon
CmUC05G095270.1-exon	CmUC05G095270.1-exon-CmU531Chr05:21954682..21954790	exon
CmUC05G095270.1-exon	CmUC05G095270.1-exon-CmU531Chr05:21955290..21955446	exon
CmUC05G095270.1-exon	CmUC05G095270.1-exon-CmU531Chr05:21955560..21955799	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC05G095270.1-cds	CmUC05G095270.1-cds-CmU531Chr05:21953491..21953667	CDS
CmUC05G095270.1-cds	CmUC05G095270.1-cds-CmU531Chr05:21953757..21953806	CDS
CmUC05G095270.1-cds	CmUC05G095270.1-cds-CmU531Chr05:21954392..21954514	CDS
CmUC05G095270.1-cds	CmUC05G095270.1-cds-CmU531Chr05:21954682..21954790	CDS
CmUC05G095270.1-cds	CmUC05G095270.1-cds-CmU531Chr05:21955290..21955446	CDS
CmUC05G095270.1-cds	CmUC05G095270.1-cds-CmU531Chr05:21955560..21955612	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC05G095270.1-five_prime_utr	CmUC05G095270.1-five_prime_utr-CmU531Chr05:21955613..21955799	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmUC05G095270.1	CmUC05G095270.1-protein	polypeptide