CmUC04G069250.1 (mRNA) Watermelon (USVL531) v1

Overview


Name	CmUC04G069250.1
Type	mRNA
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Unknown protein
Location	CmU531Chr04: 3874340 .. 3877620 (-)
Sequence length	462
RNA-Seq Expression	CmUC04G069250.1
Synteny	CmUC04G069250.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGCGCTAAGCTCGCCGGCTGCTGCTACTGTGACGAAAAAATACGTTGACTTTAGTGAAAATGATAGATCGGGCGCTGGCTTCGTCGGAAATGACCGAAAAATGATAGATCGAGCGCTAGGTTCGCCAGAAATGGCTGATCGCCGCTGTTGTGATGGGAACACCAGAGGACTTCGACCACGACGAGAGAATCCGACAACGGCGTCCTGGTGGCATGCGTGCGACGATGAAGTGGTTGGTCTGGCCAACAAGGTGTGACAGCAGCTAACCCACTCGAACGAAGAGAAAGAGAAGAAGAAGTTGCAGAGGGGAGAGAGAGAGAGAGAGAGTCGACGGGGAGGGAGAGGGTTTTCTTTTTCTTTTACTTTTTTTTTGGCACACTTCCCAAAACCCTAAGCCCCTATTTAACACAATAAACACGTCGGCTTCTACAAAAAAATGATAGATTGGGCGCTGGCTTTGTCAGAACGACCAAAAAATGATAGATTGGTCTTTGGGTTCGCCGGAAATGGTCGATTGCCGCTGCTATGACGGGAACGCCAGAGGACTTCGACCACGATGAGAGAATCCGATAGCGGCGTCCTAGCGATGTGTGTGTGGCGGTGAGGCGATTGGTCTGGCCGATGAGGCACGACGACATCTAACCCACGCGAATGGAGAGAAGGAGAAGAAGTAGAAGTTGTAGAGGGGAGAAAGAGAGAGAGAGCCGATGAGGAGGGAGAGGGTTTTCTTTTTCTTTTACTTTTTTTTTTTGGCACACTTCCCAAAACCCTAAGCCCCTATTTAACACAATAAATTCCCCACCAAACTTTCCATAATCCATTCAATCCCTCTTAATTTCTAAATCTTTTCCAACTAAAAATAAAAAATCCCACCTACCAACTTCTATCCAAATTATAAATTTGGACTACTTAATTTGAACTACTTAATTTAAATGGGGTCACCTCAAATACCAACAATCATATTTCTTAACCGCGAAATTTGAAATAAAATCTCAAATAATTTAAGATAATTGAATTACCCAAGAAGAAAATTACCTAAAAACATTTGGGTTGTCACACATGATTTATCCATAATTATAAATCTAGTAAGAAACAATGACACACAATTAACATCAACTTAAAATCATAATAAGCTAAAACAATCATAAAAAATGCTCAGTTATCAATATGACTCTGAAAACAACCTAAGAAATTTATAAAAAGTGGCTAACACACACTTTGACTCCCAACAAAAACTAAAAAGTTTCAAAGTGTCATCTTGACTCTTAAAACAAGCTAAAACAATCATTTTGACTCCCAAAACTTATCTAAAAAGTTCCTAAAAAGTGTCTAATTTTCACTTCAACTCTCAAAATAACCTAAGATATTTATAAAAAGTGGCTAACCAACACTTCAACTCCCAACAAAAACTAAAAAGCTACAAAGTGTCACCTTGACTCTTAAAATAAGCTAAAACAATCATAAAGGTTCCTAAAAAGTCACTAAGTGTAACAAAATCACTTAAAATGTTGCAAAAAATTATCTAAGTGACAATTTGACTATGAAAACCACATAAAGTAACTATGAAAACTACATAAAGTGTTAAAAAATGCCCAAGCTAGTTACATACTTTCACTCTCCAAATAAACTAAAAAGTGTCTAACATTTAAAGCATCCAAAACATTTTTGATGAGTTTCAAATGATACAAAACATACTTTAAATAGAGGTCTTAAACAAATGAATCAAGTTCGCATAAGTTTCACAATAACTTTGTACAAATAGATGCCTTAAACAAATATAAACATAAACTTGAAGGAATGACAAATATTATATGGCATGGCATTACTGTCATAGAGATTAAAACCAGCTCCCAACTACGGCTACCATTTTGATTAGAATTCTTATTTGCAAGGATAGAAGTACTTACTTTCGTCTTTTGCTAAATAGTCCTGACCATATATATTGAGCTAGTCTACCAAACATCAATAGAGTTTTATAGATTTAGGAGAAGATGCTAAATAAAAATTTGACAAGCCACTAATTTTCTAAACAACCTACGTAATATTGGAAAAATTGGTCTATATATTTTGCTAATTATTTGTTATAACTTTGCCAATACAATAAGGTACATATATCTTGTTTCATAGAACATAAGCTTTACAATCCTAGACTCTCCAAGTTCGTTAACAACTTAGAATTAGAGTATCCATTTATTTATCATAGTTCTAAACCAAATACACATATTGTTCTTTGCATAGGTAAGGCATGGTCACATCACCCACTCGAGTATAACATAGTTTACAACTTAAAATGTTGGTAAATAAGTATGTATATTACCAACCAACAGAGCAAAAACATGATTTATAGATAGATATACCCAAGCTGAGCATAAACTTAAAATGTTGGTAAATAAATATGTATTTCCTTAATTTTTATGAAAATGGAGGACTAGGAGAAAGTGTAATTTACCTTGATGACTAGAACTTGTTTCCAACCTCTTGATAGTACTTACATTGATGATTAAAATGTGAGAGACACAACATAAACAACCTTGGATAACTCATGCTTTGCCACAACACATGCTTAGATAGAAATCAAGTTCAAATGAGAAGGATACACAAATCTAACAATAATAATATTAATAAGTATGGAGACTAAAAATAGAGTTGAAACATAAATAATACAAATACATTTACTCATTACCCAAGATTTCTTTAATTTAGATATGGAAATGATCACTCCATTAGCAAAAGCTTGAAGTCCAACACTAAAGTGAGGAGCAAAGCTATATACAAAAACAAATTTATCAATTAACATACAAATCCAACCTAAAAATGCCTAAGTGCCTCAGCGCAAAGATGAGAAAGTAATGCCTTATTCCATGAAGAGCTTTGTGCGAAAAATGAGAAAGTAATGAAACACAAAATTTGAAGAAAAATGTTCTAATCTATTGAACTGCAATAGCGCAAAGATGAACATTGACAATGAATTTGTGAAGAATGCATATTAAAACAGAAACTAAATTAGATGATGAAAAAGCAAGCAAGAACAATTGATTTGCAAAAAAAAAGGGGCAAAAAATAAGTCAGAGTAGCAGACGGCGACAGATGACTCTGCAGGTGCGACGACAGCAACGGACGAGCATGATGATGGTGTGGTTGGCGATTTTGAGAGTGACGGCAAGAGGAAGAGGTGATGTGGTCCGCGATTTTGAGAGTGAAGGTGAGAGGAAGAGGAACCGTGAGGGCAATGTTGAGAGTGAGGGTGAGAGACAGAGGAACCGTGAGGGAGAGTGA

mRNA sequence

ATGGGGGCGCTAAGCTCGCCGGCTGCTGCTACTGTGACGAAAAAATACGTTGACTTTAGTGAAAATGATAGATCGGGCGCTGGCTTCGTCGGAAATGACCGAAAAATGATAGATCGAGCGCTAGGTTCGCCAGAAATGGCTGATCGCCGCTGTTGTGATGGGAACACCAGAGGACTTCGACCACGACGAGAGAATCCGACAACGGCGTCCTGGTGGCATGCGTGCGACGATGAAGTGGTTGGTCTGGCCAACAAGAGTAGCAGACGGCGACAGATGACTCTGCAGGTGCGACGACAGCAACGGACGAGCATGATGATGGTGTGGTTGGCGATTTTGAGAGTGACGGCAAGAGGAAGAGGTGATGTGGTCCGCGATTTTGAGAGTGAAGGTGAGAGGAAGAGGAACCGTGAGGGCAATGTTGAGAGTGAGGGTGAGAGACAGAGGAACCGTGAGGGAGAGTGA

Coding sequence (CDS)

ATGGGGGCGCTAAGCTCGCCGGCTGCTGCTACTGTGACGAAAAAATACGTTGACTTTAGTGAAAATGATAGATCGGGCGCTGGCTTCGTCGGAAATGACCGAAAAATGATAGATCGAGCGCTAGGTTCGCCAGAAATGGCTGATCGCCGCTGTTGTGATGGGAACACCAGAGGACTTCGACCACGACGAGAGAATCCGACAACGGCGTCCTGGTGGCATGCGTGCGACGATGAAGTGGTTGGTCTGGCCAACAAGAGTAGCAGACGGCGACAGATGACTCTGCAGGTGCGACGACAGCAACGGACGAGCATGATGATGGTGTGGTTGGCGATTTTGAGAGTGACGGCAAGAGGAAGAGGTGATGTGGTCCGCGATTTTGAGAGTGAAGGTGAGAGGAAGAGGAACCGTGAGGGCAATGTTGAGAGTGAGGGTGAGAGACAGAGGAACCGTGAGGGAGAGTGA

Protein sequence

MGALSSPAAATVTKKYVDFSENDRSGAGFVGNDRKMIDRALGSPEMADRRCCDGNTRGLRPRRENPTTASWWHACDDEVVGLANKSSRRRQMTLQVRRQQRTSMMMVWLAILRVTARGRGDVVRDFESEGERKRNREGNVESEGERQRNREGE

Homology

The following BLAST results are available for this feature:

BLAST of CmUC04G069250.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmUC04G069250.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmUC04G069250.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmUC04G069250.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..153

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmUC04G069250	CmUC04G069250	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC04G069250.1-exon	CmUC04G069250.1-exon-CmU531Chr04:3874340..3874546	exon
CmUC04G069250.1-exon	CmUC04G069250.1-exon-CmU531Chr04:3877366..3877620	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC04G069250.1-cds	CmUC04G069250.1-cds-CmU531Chr04:3874340..3874546	CDS
CmUC04G069250.1-cds	CmUC04G069250.1-cds-CmU531Chr04:3877366..3877620	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmUC04G069250.1	CmUC04G069250.1-protein	polypeptide