CmUC03G063560.1 (mRNA) Watermelon (USVL531) v1

Overview


Name	CmUC03G063560.1
Type	mRNA
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Enzymatic polyprotein
Location	CmU531Chr03: 27045812 .. 27046552 (+)
Sequence length	615
RNA-Seq Expression	CmUC03G063560.1
Synteny	CmUC03G063560.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTTCTAAACTTCTCTCTAAAATTTCTCCTCACCCTCTAGTGATAATTGATAATATCACTTATTCTTCTGTTTTTCTAAAAACTGATGATATTTTAAAAATCATATCAAACCATAATTCAACCGAAGTTCAAATTGCTAAAGTTGAAGAGCAACTAAAATACTGGTCTATCTCGAAATTAGACGCACATCAAATCTTCAAAGTTAATAACTTCAATTTTTCTTAGACTTATATTATAGTAATCACTGAGAAAGATCTTGCAATGAGGATTAATTCACAGAAATCAACCTTTTGTCAAAAGAATCAATAGCACCAGCTCACACCAAATTCAAATACCTCCATATTGGATGTTTTCAAGTTGCTTTCAAGCCACTCTTTAAGGAAGGATTGGATGTACCTTGCTCTAAGAGACAAAAGACATTTGAGATTTTCACAATCTCTTTTAGGTGTGGTTCAATTAAACCTGGAAAACGGTTTATTCTTCTTCTCTTGCAGACCAAGCTTTACCGTTTCTTTAGAAGACGCAAACATCTTGGATACTTTAAGCTTCAATGTTCATTCTCAAGGACTCGAGCTAAAGAACGGATCACTTCCTTTTGTGGTTCTTTATCGAGTTTAGTACAAGTTGATGAATACAAATCTTTCTCTAAAAGCCCTCGAAATATCTCCAAAAGGCTATACCATGCTCATGGAAGTCAATCTTGAGAAATTCTCGATGATCGTGCCCAAAATTTTGTAG

mRNA sequence

ATGCTTTCTAAACTTCTCTCTAAAATTTCTCCTCACCCTCTAGTGATAATTGATAATATCACTTATTCTTCTGTTTTTCTAAAAACTGATGATATTTTAAAAATCATATCAAACCATAATTCAACCGAAGTTCAAATTGCTAAAGTTGAAGAGCAACTAAAATACTGGTCTATCTCGAAATTAGACGCACATCAAATCTTCAAACACCAGCTCACACCAAATTCAAATACCTCCATATTGGATGTTTTCAAGTTGCTTTCAAGCCACTCTTTAAGGAAGGATTGGATGTACCTTGCTCTAAGAGACAAAAGACATTTGAGATTTTCACAATCTCTTTTAGGTGTGGTTCAATTAAACCTGGAAAACGGTTTATTCTTCTTCTCTTGCAGACCAAGCTTTACCGTTTCTTTAGAAGACGCAAACATCTTGGATACTTTAAGCTTCAATGTTCATTCTCAAGGACTCGAGCTAAAGAACGGATCACTTCCTTTTGTGTACAAGTTGATGAATACAAATCTTTCTCTAAAAGCCCTCGAAATATCTCCAAAAGGCTATACCATGCTCATGGAAGTCAATCTTGAGAAATTCTCGATGATCGTGCCCAAAATTTTGTAG

Coding sequence (CDS)

ATGCTTTCTAAACTTCTCTCTAAAATTTCTCCTCACCCTCTAGTGATAATTGATAATATCACTTATTCTTCTGTTTTTCTAAAAACTGATGATATTTTAAAAATCATATCAAACCATAATTCAACCGAAGTTCAAATTGCTAAAGTTGAAGAGCAACTAAAATACTGGTCTATCTCGAAATTAGACGCACATCAAATCTTCAAACACCAGCTCACACCAAATTCAAATACCTCCATATTGGATGTTTTCAAGTTGCTTTCAAGCCACTCTTTAAGGAAGGATTGGATGTACCTTGCTCTAAGAGACAAAAGACATTTGAGATTTTCACAATCTCTTTTAGGTGTGGTTCAATTAAACCTGGAAAACGGTTTATTCTTCTTCTCTTGCAGACCAAGCTTTACCGTTTCTTTAGAAGACGCAAACATCTTGGATACTTTAAGCTTCAATGTTCATTCTCAAGGACTCGAGCTAAAGAACGGATCACTTCCTTTTGTGTACAAGTTGATGAATACAAATCTTTCTCTAAAAGCCCTCGAAATATCTCCAAAAGGCTATACCATGCTCATGGAAGTCAATCTTGAGAAATTCTCGATGATCGTGCCCAAAATTTTGTAG

Protein sequence

MLSKLLSKISPHPLVIIDNITYSSVFLKTDDILKIISNHNSTEVQIAKVEEQLKYWSISKLDAHQIFKHQLTPNSNTSILDVFKLLSSHSLRKDWMYLALRDKRHLRFSQSLLGVVQLNLENGLFFFSCRPSFTVSLEDANILDTLSFNVHSQGLELKNGSLPFVYKLMNTNLSLKALEISPKGYTMLMEVNLEKFSMIVPKIL

Homology

[Close]

BLAST of CmUC03G063560.1 vs. NCBI nr
Match: TYK01213.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 192.6 bits (488), Expect = 3.4e-45
Identity = 119/253 (47.04%), Postives = 153/253 (60.47%), Query Frame = 0


Query: 1   MLSKLLSKISPHPLVIIDNITYSSVFLKT----DDILKIISNHNSTEVQIAKVEEQLKYW 60
           M+SKLLSK+SPH   I+D  + SS   KT    DD+ K ++ HNS E  +A+VE +LK W
Sbjct: 1   MISKLLSKLSPHSPSIVDTTSSSSPSSKTPRSRDDLSKALAEHNSVEAHLAQVENRLKNW 60

Query: 61  SISKLDAHQIFKHQ----------LTPNSNTSILDVF---KLLSSHSLRKDW-------- 120
           SI K+D  Q++K            + P  N ++ D F    LL   +L K          
Sbjct: 61  SIPKIDPSQVYKINTFNFSQQDVIVIPEENVAMKDEFTAINLLPEETLFKVKNKFKYLHI 120

Query: 121 ------------------MYLALRDKRHLRFSQSLLGVVQLNLENGLFFFSCRPSFTVSL 180
                             +YLALRDKRHLRF+ SLLG+VQ NLE G  +F+C+P  TVSL
Sbjct: 121 GCVQVALKPLFREGFDVPVYLALRDKRHLRFTPSLLGIVQSNLEKGPVYFNCKPGLTVSL 180

Query: 181 EDANILDTLSFNVHSQGLELKNGSLPFV------YKLMNTNLSLKALEISPKGYTMLMEV 205
           +D NI+DTLS +VHSQ LELK+GSLPF       +KLM+TN+S KAL +SPKGYTMLMEV
Sbjct: 181 QDKNIMDTLSLDVHSQRLELKDGSLPFAVSYRIYFKLMHTNISPKALGVSPKGYTMLMEV 240

[Close]

BLAST of CmUC03G063560.1 vs. NCBI nr
Match: KAA0066201.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 192.6 bits (488), Expect = 3.4e-45
Identity = 119/253 (47.04%), Postives = 153/253 (60.47%), Query Frame = 0


Query: 1   MLSKLLSKISPHPLVIIDNITYSSVFLKT----DDILKIISNHNSTEVQIAKVEEQLKYW 60
           M+SKLLSK+SPH   I+D  + SS   KT    DD+ K ++ HNS E  +A+VE +LK W
Sbjct: 1   MISKLLSKLSPHSPSIVDTTSSSSPSSKTPRSRDDLSKALAEHNSVEAHLAQVENRLKNW 60

Query: 61  SISKLDAHQIFKHQ----------LTPNSNTSILDVF---KLLSSHSLRKDW-------- 120
           SI K+D  Q++K            + P  N ++ D F    LL   +L K          
Sbjct: 61  SIPKIDPSQVYKINTFNFSQQDVIVIPEENVAMKDEFTAINLLPEETLFKVKNKFKYLHI 120

Query: 121 ------------------MYLALRDKRHLRFSQSLLGVVQLNLENGLFFFSCRPSFTVSL 180
                             +YLALRDKRHLRF+ SLLG+VQ NLE G  +F+C+P  TVSL
Sbjct: 121 GCVQVALKPLFREGFDVPVYLALRDKRHLRFTPSLLGIVQSNLEKGPVYFNCKPGLTVSL 180

Query: 181 EDANILDTLSFNVHSQGLELKNGSLPFV------YKLMNTNLSLKALEISPKGYTMLMEV 205
           +D NI+DTLS +VHSQ LELK+GSLPF       +KLM+TN+S KAL +SPKGYTMLMEV
Sbjct: 181 QDKNIMDTLSLDVHSQRLELKDGSLPFAVSYRIYFKLMHTNISPKALGVSPKGYTMLMEV 240

[Close]

BLAST of CmUC03G063560.1 vs. NCBI nr
Match: TYJ98087.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 191.0 bits (484), Expect = 9.8e-45
Identity = 122/255 (47.84%), Postives = 156/255 (61.18%), Query Frame = 0


Query: 1   MLSKLLSKISPHPLVIID---NITYSSVFLKT---DDILKIISNHNSTEVQIAKVEEQLK 60
           MLSKLLSK+SPH   IID   + +YSS+   +   DD+   ++ HN+ E  +A+VE +LK
Sbjct: 1   MLSKLLSKLSPHSPTIIDATASSSYSSLSSNSRSQDDLSTALAKHNTAEAHLAQVENRLK 60

Query: 61  YWSISKLDAHQIFKHQ----------LTPNSNTSILDVF---KLLSSHSLRKDW------ 120
            WSI KL+A Q++K            +    N ++ D F   KLL   +L K        
Sbjct: 61  NWSIPKLEASQVYKINTFNFSQQDIIVITEENVAMKDEFTAIKLLPEETLLKVRERFKYL 120

Query: 121 --------------------MYLALRDKRHLRFSQSLLGVVQLNLENGLFFFSCRPSFTV 180
                               +YLALRDKRHLRF+ SLLG+VQ NLE G  +F+CRP  TV
Sbjct: 121 HIGCVQVALKPLFREGLDVPVYLALRDKRHLRFTPSLLGIVQSNLEQGPVYFNCRPGLTV 180

Query: 181 SLEDANILDTLSFNVHSQGLELKNGSLPFV------YKLMNTNLSLKALEISPKGYTMLM 205
           SL+D NI+DT+S +VHSQGLELK+GSLPF       +KLM+TNLS KAL ISPKGYTMLM
Sbjct: 181 SLQDKNIMDTISLDVHSQGLELKDGSLPFAVSYRIYFKLMHTNLSPKALGISPKGYTMLM 240

[Close]

BLAST of CmUC03G063560.1 vs. NCBI nr
Match: KAA0052109.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 191.0 bits (484), Expect = 9.8e-45
Identity = 122/255 (47.84%), Postives = 156/255 (61.18%), Query Frame = 0


Query: 1   MLSKLLSKISPHPLVIID---NITYSSVFLKT---DDILKIISNHNSTEVQIAKVEEQLK 60
           MLSKLLSK+SPH   IID   + +YSS+   +   DD+   ++ HN+ E  +A+VE +LK
Sbjct: 1   MLSKLLSKLSPHSPTIIDATASSSYSSLSSNSRSQDDLSTALAKHNTAEAHLAQVENRLK 60

Query: 61  YWSISKLDAHQIFKHQ----------LTPNSNTSILDVF---KLLSSHSLRKDW------ 120
            WSI KL+A Q++K            +    N ++ D F   KLL   +L K        
Sbjct: 61  NWSIPKLEASQVYKINTFNFSQQDIIVITEENVAMKDEFTAIKLLPEETLLKVRERFKYL 120

Query: 121 --------------------MYLALRDKRHLRFSQSLLGVVQLNLENGLFFFSCRPSFTV 180
                               +YLALRDKRHLRF+ SLLG+VQ NLE G  +F+CRP  TV
Sbjct: 121 HIGCVQVALKPLFREGLDVPVYLALRDKRHLRFTPSLLGIVQSNLEQGPVYFNCRPGLTV 180

Query: 181 SLEDANILDTLSFNVHSQGLELKNGSLPFV------YKLMNTNLSLKALEISPKGYTMLM 205
           SL+D NI+DT+S +VHSQGLELK+GSLPF       +KLM+TNLS KAL ISPKGYTMLM
Sbjct: 181 SLQDKNIMDTISLDVHSQGLELKDGSLPFAVSYRIYFKLMHTNLSPKALGISPKGYTMLM 240

[Close]

BLAST of CmUC03G063560.1 vs. NCBI nr
Match: KAA0059217.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 189.1 bits (479), Expect = 3.7e-44
Identity = 122/256 (47.66%), Postives = 155/256 (60.55%), Query Frame = 0


Query: 1   MLSKLLSKISPHPLVIID---NITYSSV----FLKTDDILKIISNHNSTEVQIAKVEEQL 60
           MLSKLLSK+SPH   IID   + +YSS         +D+   ++ HNS E  +A+VE +L
Sbjct: 1   MLSKLLSKLSPHSPAIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRL 60

Query: 61  KYWSISKLDAHQIFKHQ----------LTPNSNTSILDVF---KLLSSHSLRKDW----- 120
           K WSI KL+A+Q++K            +    N ++ D F   KLL   +L K       
Sbjct: 61  KNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEFTAIKLLPEETLFKVRDRFKY 120

Query: 121 ---------------------MYLALRDKRHLRFSQSLLGVVQLNLENGLFFFSCRPSFT 180
                                +YLALRDKRHLRF+ SLLG+VQ NLE G  +F+CRP  T
Sbjct: 121 LHIGCVQVALKPLFREGLDVPVYLALRDKRHLRFTPSLLGIVQSNLEQGPVYFNCRPGLT 180

Query: 181 VSLEDANILDTLSFNVHSQGLELKNGSLPFV------YKLMNTNLSLKALEISPKGYTML 205
           VSL+D NI+DT+S +VHSQGLELK+GSLPF       +KLM+TNLS KAL ISPKGYTML
Sbjct: 181 VSLQDKNIMDTISLDVHSQGLELKDGSLPFAVSYRIYFKLMHTNLSPKALGISPKGYTML 240

[Close]

BLAST of CmUC03G063560.1 vs. ExPASy Swiss-Prot
Match: Q91DM0 (Genome polyprotein OS=Petunia vein clearing virus (isolate Shepherd) OX=492094 PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 6.0e-05
Identity = 25/65 (38.46%), Postives = 35/65 (53.85%), Query Frame = 0


Query: 98  LALRDKRHLRFSQSLLGVVQLNLENGLFFFSCRPSFTVSLEDANILDTLSFNVHSQGLEL 157
           LAL D R+L +  + LG  ++ L  G  F +  P+FT+SL DAN+   L   V  QG  L
Sbjct: 148 LALLDTRYLEYQHANLGTAEITLNAGTVFITLFPNFTMSLSDANLSTALKIQVQIQGAPL 207

Query: 158 KNGSL 163
              S+
Sbjct: 208 TKDSI 212

[Close]

BLAST of CmUC03G063560.1 vs. ExPASy Swiss-Prot
Match: Q6XKE6 (Genome polyprotein OS=Petunia vein clearing virus (isolate Hohn) OX=492095 PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 6.0e-05
Identity = 25/65 (38.46%), Postives = 35/65 (53.85%), Query Frame = 0


Query: 98  LALRDKRHLRFSQSLLGVVQLNLENGLFFFSCRPSFTVSLEDANILDTLSFNVHSQGLEL 157
           LAL D R+L +  + LG  ++ L  G  F +  P+FT+SL DAN+   L   V  QG  L
Sbjct: 149 LALLDTRYLEYQHANLGTAEITLNAGTVFITLFPNFTMSLSDANLSTALKIQVQIQGAPL 208

Query: 158 KNGSL 163
              S+
Sbjct: 209 TKDSI 213

[Close]

BLAST of CmUC03G063560.1 vs. ExPASy TrEMBL
Match: A0A5A7VKK8 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G002180 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.6e-45
Identity = 119/253 (47.04%), Postives = 153/253 (60.47%), Query Frame = 0


Query: 1   MLSKLLSKISPHPLVIIDNITYSSVFLKT----DDILKIISNHNSTEVQIAKVEEQLKYW 60
           M+SKLLSK+SPH   I+D  + SS   KT    DD+ K ++ HNS E  +A+VE +LK W
Sbjct: 1   MISKLLSKLSPHSPSIVDTTSSSSPSSKTPRSRDDLSKALAEHNSVEAHLAQVENRLKNW 60

Query: 61  SISKLDAHQIFKHQ----------LTPNSNTSILDVF---KLLSSHSLRKDW-------- 120
           SI K+D  Q++K            + P  N ++ D F    LL   +L K          
Sbjct: 61  SIPKIDPSQVYKINTFNFSQQDVIVIPEENVAMKDEFTAINLLPEETLFKVKNKFKYLHI 120

Query: 121 ------------------MYLALRDKRHLRFSQSLLGVVQLNLENGLFFFSCRPSFTVSL 180
                             +YLALRDKRHLRF+ SLLG+VQ NLE G  +F+C+P  TVSL
Sbjct: 121 GCVQVALKPLFREGFDVPVYLALRDKRHLRFTPSLLGIVQSNLEKGPVYFNCKPGLTVSL 180

Query: 181 EDANILDTLSFNVHSQGLELKNGSLPFV------YKLMNTNLSLKALEISPKGYTMLMEV 205
           +D NI+DTLS +VHSQ LELK+GSLPF       +KLM+TN+S KAL +SPKGYTMLMEV
Sbjct: 181 QDKNIMDTLSLDVHSQRLELKDGSLPFAVSYRIYFKLMHTNISPKALGVSPKGYTMLMEV 240

[Close]

BLAST of CmUC03G063560.1 vs. ExPASy TrEMBL
Match: A0A5D3BN76 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75441G00050 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.6e-45
Identity = 119/253 (47.04%), Postives = 153/253 (60.47%), Query Frame = 0


Query: 1   MLSKLLSKISPHPLVIIDNITYSSVFLKT----DDILKIISNHNSTEVQIAKVEEQLKYW 60
           M+SKLLSK+SPH   I+D  + SS   KT    DD+ K ++ HNS E  +A+VE +LK W
Sbjct: 1   MISKLLSKLSPHSPSIVDTTSSSSPSSKTPRSRDDLSKALAEHNSVEAHLAQVENRLKNW 60

Query: 61  SISKLDAHQIFKHQ----------LTPNSNTSILDVF---KLLSSHSLRKDW-------- 120
           SI K+D  Q++K            + P  N ++ D F    LL   +L K          
Sbjct: 61  SIPKIDPSQVYKINTFNFSQQDVIVIPEENVAMKDEFTAINLLPEETLFKVKNKFKYLHI 120

Query: 121 ------------------MYLALRDKRHLRFSQSLLGVVQLNLENGLFFFSCRPSFTVSL 180
                             +YLALRDKRHLRF+ SLLG+VQ NLE G  +F+C+P  TVSL
Sbjct: 121 GCVQVALKPLFREGFDVPVYLALRDKRHLRFTPSLLGIVQSNLEKGPVYFNCKPGLTVSL 180

Query: 181 EDANILDTLSFNVHSQGLELKNGSLPFV------YKLMNTNLSLKALEISPKGYTMLMEV 205
           +D NI+DTLS +VHSQ LELK+GSLPF       +KLM+TN+S KAL +SPKGYTMLMEV
Sbjct: 181 QDKNIMDTLSLDVHSQRLELKDGSLPFAVSYRIYFKLMHTNISPKALGVSPKGYTMLMEV 240

[Close]

BLAST of CmUC03G063560.1 vs. ExPASy TrEMBL
Match: A0A5D3BG41 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold565G00200 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 4.7e-45
Identity = 122/255 (47.84%), Postives = 156/255 (61.18%), Query Frame = 0


Query: 1   MLSKLLSKISPHPLVIID---NITYSSVFLKT---DDILKIISNHNSTEVQIAKVEEQLK 60
           MLSKLLSK+SPH   IID   + +YSS+   +   DD+   ++ HN+ E  +A+VE +LK
Sbjct: 1   MLSKLLSKLSPHSPTIIDATASSSYSSLSSNSRSQDDLSTALAKHNTAEAHLAQVENRLK 60

Query: 61  YWSISKLDAHQIFKHQ----------LTPNSNTSILDVF---KLLSSHSLRKDW------ 120
            WSI KL+A Q++K            +    N ++ D F   KLL   +L K        
Sbjct: 61  NWSIPKLEASQVYKINTFNFSQQDIIVITEENVAMKDEFTAIKLLPEETLLKVRERFKYL 120

Query: 121 --------------------MYLALRDKRHLRFSQSLLGVVQLNLENGLFFFSCRPSFTV 180
                               +YLALRDKRHLRF+ SLLG+VQ NLE G  +F+CRP  TV
Sbjct: 121 HIGCVQVALKPLFREGLDVPVYLALRDKRHLRFTPSLLGIVQSNLEQGPVYFNCRPGLTV 180

Query: 181 SLEDANILDTLSFNVHSQGLELKNGSLPFV------YKLMNTNLSLKALEISPKGYTMLM 205
           SL+D NI+DT+S +VHSQGLELK+GSLPF       +KLM+TNLS KAL ISPKGYTMLM
Sbjct: 181 SLQDKNIMDTISLDVHSQGLELKDGSLPFAVSYRIYFKLMHTNLSPKALGISPKGYTMLM 240

[Close]

BLAST of CmUC03G063560.1 vs. ExPASy TrEMBL
Match: A0A5A7UF59 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold578G00970 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 4.7e-45
Identity = 122/255 (47.84%), Postives = 156/255 (61.18%), Query Frame = 0


Query: 1   MLSKLLSKISPHPLVIID---NITYSSVFLKT---DDILKIISNHNSTEVQIAKVEEQLK 60
           MLSKLLSK+SPH   IID   + +YSS+   +   DD+   ++ HN+ E  +A+VE +LK
Sbjct: 1   MLSKLLSKLSPHSPTIIDATASSSYSSLSSNSRSQDDLSTALAKHNTAEAHLAQVENRLK 60

Query: 61  YWSISKLDAHQIFKHQ----------LTPNSNTSILDVF---KLLSSHSLRKDW------ 120
            WSI KL+A Q++K            +    N ++ D F   KLL   +L K        
Sbjct: 61  NWSIPKLEASQVYKINTFNFSQQDIIVITEENVAMKDEFTAIKLLPEETLLKVRERFKYL 120

Query: 121 --------------------MYLALRDKRHLRFSQSLLGVVQLNLENGLFFFSCRPSFTV 180
                               +YLALRDKRHLRF+ SLLG+VQ NLE G  +F+CRP  TV
Sbjct: 121 HIGCVQVALKPLFREGLDVPVYLALRDKRHLRFTPSLLGIVQSNLEQGPVYFNCRPGLTV 180

Query: 181 SLEDANILDTLSFNVHSQGLELKNGSLPFV------YKLMNTNLSLKALEISPKGYTMLM 205
           SL+D NI+DT+S +VHSQGLELK+GSLPF       +KLM+TNLS KAL ISPKGYTMLM
Sbjct: 181 SLQDKNIMDTISLDVHSQGLELKDGSLPFAVSYRIYFKLMHTNLSPKALGISPKGYTMLM 240

[Close]

BLAST of CmUC03G063560.1 vs. ExPASy TrEMBL
Match: A0A5D3BEY3 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold690G00300 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.8e-44
Identity = 122/256 (47.66%), Postives = 155/256 (60.55%), Query Frame = 0


Query: 1   MLSKLLSKISPHPLVIID---NITYSSV----FLKTDDILKIISNHNSTEVQIAKVEEQL 60
           MLSKLLSK+SPH   IID   + +YSS         +D+   ++ HNS E  +A+VE +L
Sbjct: 1   MLSKLLSKLSPHSPAIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRL 60

Query: 61  KYWSISKLDAHQIFKHQ----------LTPNSNTSILDVF---KLLSSHSLRKDW----- 120
           K WSI KL+A+Q++K            +    N ++ D F   KLL   +L K       
Sbjct: 61  KNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEFTAIKLLPEETLFKVRDRFKY 120

Query: 121 ---------------------MYLALRDKRHLRFSQSLLGVVQLNLENGLFFFSCRPSFT 180
                                +YLALRDKRHLRF+ SLLG+VQ NLE G  +F+CRP  T
Sbjct: 121 LHIGCVQVALKPLFREGLDVPVYLALRDKRHLRFTPSLLGIVQSNLEQGPVYFNCRPGLT 180

Query: 181 VSLEDANILDTLSFNVHSQGLELKNGSLPFV------YKLMNTNLSLKALEISPKGYTML 205
           VSL+D NI+DT+S +VHSQGLELK+GSLPF       +KLM+TNLS KAL ISPKGYTML
Sbjct: 181 VSLQDKNIMDTISLDVHSQGLELKDGSLPFAVSYRIYFKLMHTNLSPKALGISPKGYTML 240

The following BLAST results are available for this feature:

BLAST of CmUC03G063560.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK01213.1	3.4e-45	47.04	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
KAA0066201.1	3.4e-45	47.04	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
TYJ98087.1	9.8e-45	47.84	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
KAA0052109.1	9.8e-45	47.84	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
KAA0059217.1	3.7e-44	47.66	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of CmUC03G063560.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q91DM0	6.0e-05	38.46	Genome polyprotein OS=Petunia vein clearing virus (isolate Shepherd) OX=492094 P...	[more]
Q6XKE6	6.0e-05	38.46	Genome polyprotein OS=Petunia vein clearing virus (isolate Hohn) OX=492095 PE=3 ...	[more]

BLAST of CmUC03G063560.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VKK8	1.6e-45	47.04	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21...	[more]
A0A5D3BN76	1.6e-45	47.04	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75...	[more]
A0A5D3BG41	4.7e-45	47.84	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold56...	[more]
A0A5A7UF59	4.7e-45	47.84	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57...	[more]
A0A5D3BEY3	1.8e-44	47.66	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold69...	[more]

BLAST of CmUC03G063560.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028919	Viral movement protein	PFAM	PF01107	MP	coord: 97..165 e-value: 2.0E-11 score: 43.8

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmUC03G063560	CmUC03G063560	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC03G063560.1-exon	CmUC03G063560.1-exon-CmU531Chr03:27045812..27046015	exon
CmUC03G063560.1-exon	CmUC03G063560.1-exon-CmU531Chr03:27046124..27046414	exon
CmUC03G063560.1-exon	CmUC03G063560.1-exon-CmU531Chr03:27046433..27046552	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC03G063560.1-cds	CmUC03G063560.1-cds-CmU531Chr03:27045812..27046015	CDS
CmUC03G063560.1-cds	CmUC03G063560.1-cds-CmU531Chr03:27046124..27046414	CDS
CmUC03G063560.1-cds	CmUC03G063560.1-cds-CmU531Chr03:27046433..27046552	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmUC03G063560.1	CmUC03G063560.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding