CmUC02G045480.1 (mRNA) Watermelon (USVL531) v1

Overview


Name	CmUC02G045480.1
Type	mRNA
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Transcription initiation factor IIA subunit 1
Location	CmU531Chr02: 33363265 .. 33370455 (+)
Sequence length	1938
RNA-Seq Expression	CmUC02G045480.1
Synteny	CmUC02G045480.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTCTCTCTCTCTCTCTCTTCCTCTTCTCCCTTCTCCCTCGCCTCCTCTGCCCTTTTACTTCACACAACTCTACGAAATCCAATAAGCTTCTGCGGATTGTATGGATCTTCTTCCTTGAGTTTTCTCTCCAATTTTCTCCAAACACTCGATTCTTTCTGGGTTTCGCTTTTGGAGGGAATCGGAGGTAGACAGAGCTGAGGCGGATCCGATATGGCGACTTCCACGAGCTCTATCTACATCAATGTCATCGAGGATGTTATCAACAAGCTTCGCGATGAGTTCGTTGATAATGGTCCCGGGGAGGACGTTCTCAAGGAGCTTCAAGGAGTAATTCTTGATCCCCCCCAATCTTGAAATTTCTTGTTATTCTTCTTTGTCTCATACTCTTAGCTTCTCTACTGAACTGAATATTTTTCTTTTCTTTTTCAATCTATTTCAAGGAATCGATTGAATTTTTTCGGTGATTACTTTCTGGGTTTGATCCGATTCTTTCTAGGGTTTTGAGGCTTTGAAGCTAATTTAAGCTGTGGTTGGGCTGATTCTCTTCTTTGTGGGAACTTTTTAGATGTGGGAGGCGAAAATGATGCAAGCGCGTGCCGTGACTGGTCCCATAGAGAGGTCTGCACCATCTAAGCCCACACCCGGAGGTCCTATAACTCCGGTTCACGATCTCAATGTTCCGTATGAGGGTACTGAAGAGTACGAAACTCCCACAGCTGATTTACTTTTTCCGCCGGTGATTACTTCTCTGTCCCTTCTACTTGATGTTTTTCCGGAGTTCGTAATTAATAATCGACGCGAATTTGGTAATTGTAGACGCCACTGCAGACTCCAATTCAAACCCCTTTACCAGGAACTGCTGACAACGCGATGTATAATATTCCTACTGGACCCAGCGACCACTCTGCTTCTGGAACTGATGCTTCTCCAGCTGCTACCACTCCTGGAGGTAGCGCTACTAACAATGTTGAGGTCAGATCTGGAAGGCCAACCCCATATATGGTAATTGCTGGTTGACTTTGACGCCACTGCTAATCTTTACATTTTCTCATTTCCTGCCGTTTACCCACTCCATACTGTCGTGATTGCAGATTTTTTTTCACCTTTTGTTTCTTGGATAAAAAAAAGTGTTATGTGTAGTCTTGGTAGCCGTTAATTTGATTTGAAGTGGATTACTGGCATTGATATGGTTATTACCATCAAAATTTTGAAGTATGCTGTTGATAGTTGCACATTCCATTATTTGGGGTTCTGATAGACGTCTACATTCATTTTTCAGCAACCACCTTCTTGGATGGGTCAAAGAACTCCTGTTGACGTTAATATTGGTGAGTCTAGTGTTGAAGTAATGGAAAGCTTCACAACAATAATGCTGTAGTAATTTATATTCCTTGTATTTTGTAGCCTACGTGGAGGGGCGTGATGAACCAGACAGGGGAGCCGCTGGTGCTCACCCATCTCTTACACAAGTAACTTCTTTCTTGATTCGTGCTTCCATCATGAAAAAAAATTGTTGCCTGATATGAACACCAAAACTCCATTGTGAATTTCATCTGCTTCTGATTTTGAATTACTCCACTCCTTGCTGCCATGTACCTATTTGCACAAAACTTCAGTAACTTCGTTATGATGTTTAAACTTTGGGAAACAATTCTCAGGACTTTTTCATGATGAACTCTGGGAAGCGTAAGCGTGATGATTTTGCTTCCCAGTACCAGACCAATGGGTTTATACCACAGCAAGATGGAGCTGGAGATGCTGCCCATAGTGTGTTTGAGATTGAGGTTTTGTTTTCTTACCTGTCTGTACTCTAGTAGATTCCTTTCAGCCTGGACTCGCTTGCCAATTTTCTTTCTCATAATTTCACTTCATAGCTTATTATTTTTATTATTTTCTCTCTTTTGAAGTAAAACAAGAGTTAAAGAGTAATTACAAAAAGGCTTCACCACTGAAGCCCACCGAGAGACGTTAAACCGAACAATGGCCCGAATGTCACTATGCGACCTCTCAAGCCTTTTAAAAATTATGTTGTTCCTCTCTTCCTAAAGGACCTACACGATAACACACTCCTTGGTTCATTTCAAAAATCTTCTCTTCTCACCAGAGGGAACTCCTTGATCATCTCTTTGCAATTCTATGTCTAACCAAATATAAACCAAACTCTTCGAAGAAACAACTCCAAAATACATGAGCTAAATCACAACTTTGATATGATCGAGATTCTCTGCCATCCTCCTACAAAGAATGCAGCAAAAAGGCCCAATAAAAACGGGCACCCCCCTTGAAACCCGACCACTTATCTAAAAAGAGAAACCCGGACCAAGTTATTAACTTTTTCTTGGAGAACCTGCCACACAAAATACTTGGGTATTTGCATCTTCTACAATGAGGCAAAGACATAACCACTTGAGGGGGAGGATTAACCAAACCAAGAAAAAAAGGTTTACAAGACAAACCTTTGGATGGACTAGATGACTCCAAATATGAACCTCCTTTCTCCCCAAAATTCAACAGAACTCCACAATCAAAGAAAGAAAGGCAACGATTCCATTGTTTTCCTACTGGATAGAGGACGATGGAACCCCTTGAGAGGTCAAGTTTCAGTTCATAGTCTTGCATGCAAGTTACGGACTTAGTAATAGTATCAACAGTAAAATTGTCTATTAGCCCTTGGGGTGGATGCGTATTATTGTTTTTCCTGTATGATTCTCATACAGCGAGACATAATTACACATGGAGCCATGCTCCCACCTAATAAGCTAAGGAATCTTGCAGTTTCCCTTGATTTAAACATAAAATATTTTCTGGGTTAAGCGTACATGATGTAAAATTTATATTTGACGTGAAAACTTCAGCTATTTTTTCCATCGCTATAAGAAACCACACAATAACTCAAAATGAATCCCACAGTGGAGGGGAAACTGGAAAACGACAGTTTCACATTCAAGCTCAATTATACATGCATTTCTCTTTATGCAAATTGAAACATCACAGACTATTTGAGAGGCTTAGTCTTTAGTTTAACAGCTGATTTTGATTTCCAGTGCCCTCAACAATTGCCAATAGTTCTTGTATATTCTTCCCCAGTTTGGGGGTGCTCTGTGACAAACACAAACTTCAAGTCATCCCTTTACAAAACTTACTGACTGCCTTATCTAGCCGACAGATTGACTACCTTTATTTACTAGCTTGCTTCTGCTGCCTCACGTGTGTAATGTGGATTGGAAAGGTTGCTATATGGCTATAAGAGAAATTTTAAAAACTCAGTACTCTTTTAGATTCGTACTATTCTTGACCATAAATTGTGACCTTCATATTCTACTAAAATTCAAGGAAAAAAAAAGGAAAAAAGAAAAAAGAAAAAAAAAGTTTGGGTGGCTAGACTTGGCCTTGTGTGGGCCTACAAGATAATCTGGGAAGGTAAGTCAAAGGGTGGTTCTGCAATCTGCATTATGGATTGTGCTAGAAATGGTTATTTGGTTCATATATGATTTACAGGTAGAAGAAATAGTATTGCCATTTGAATTGCCTAGACGTCAAGTGACTCCTCCTAGGTGTCTGTTTTAGTCTGTGGCATTTGGATCTTCAGTCTTTTTCACGACGAGGTTGTCTATCTTTCTAGCCATGAGACCCCCAACCCCTCCAACCTCCAGAAGCTATGAGCTAAGAAGCGTGATCACAAATATAAGACATGGACCCACTTTAATTTCTAAAAACCTAGGATAGGACAGCACAGGGACACGTTTATTATAACACACACACACATAAATATTTGTGATCTCATACTGAAAATTTGTTTTCGTTTATTATACTTATGCTTTTATGATACATCAAACCAGCTAGTCATTTTTTTTATAGAAAACCAACTTTTATTAAGATGATGTCCTGGGGAGGAGATTGGAAAATATCATTAGGCTCAATATCCCTCTTTCTAGGCTTTTATTTCTAAGGATTTTTTTAAAAAAATATTTCTAATTATAATTTTTATTTTAATACCAATGGAAAGCTTGGCTTCTTTTTGAAAAATTCATTAAGAAGACGAAAAATCAAAATACAACAGGTCCAATCGAAGCAAGGGGAACATCCTGCAAGATAAGGTGCTCCGAAATTTATGTACAAAAAGTCAGATCCCATATATCCTCCCAAGAACTCTCTTCTGAGGAATTCTTTCTTTTCTTTTTCAGCTAGATAAACCACAAAATAACCAAAATCCGCTGCCAAAGAATCCCTCACCTGGAATGGAGGATTCACAACAGCCTGTTCTCTCGAATGTTTGAATTCTGCCCAACGACCAAACTTATCAAAATTTTAGATGATTGAAATCTTAAGTAAATTTGAAGTCAATAATGCTTAGGCCTTGATTAATATTTTTTTTCTTTGTCACTTAATGCCTTTTAATTTCTATTTACATCTTTCTGATTGTATTTATTTCCTATATCTGCTGCCTGATGCTTCTAAAAGTGAGAATATTCTCTTGAGCTTTGTGTTAACAGTTATGACTAAATAGAACTCACGTGATTACATTTTGCTGAATGCTTTTTGTTTATTGCGATCAGTCTTTGACACTCCTTAATGGTAAGCTTTTGCAGATAAGTGGATGCAATGCTTTTGATGGGAGGCCTGGCGTTATCACTTCTCCAAAGAGTGCAACATCATCACATATTGGAAGATCATTATTGAAGATTCCACAACTTGATGGACCAATGCCTGATCCTTATGATGATGTGCTTTCAACACCCAACGTTAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTTCCCTTAAAGTTATAGAATTTTCTATCTTTAAAACAATAGAATATTTATGCAAGTAATAGTTACAGAAATTTTCGCACTTTTACCCTTCTTTTTACTTGTTATGATTTTGCAAGGTGGGTGCCTATTCTCTGCCACTGTCTTTTGATTATCCTTTCATCTTTTTGTAGAAGTTAGGCATCTGTTCCACGTCTTCTTATAAGGATGTCCATAGTCATATAGATTGTTGTTTGGTAGTACAAAGCCTTGTGGAGCTAGGTACAAGCCACAAACTTGTCATGGACGTCATGAAAGCAAGGGGTTGTTTGCTGGGAAAAATTAGAACCTTTCTCAATGAAAACAAATTAAAACTGTTGAGTTACAGGCTCAGCGACAGAAATAAATAGGCACACACAAAATAATGTTAAAATGTCAGCTGTACGATACAAATGTGTTTAACCAAGAATTTTTGTGTACGATTTCCTGGCTTCTTACCAATGGTTAATATTAGAGCTCATGAAGGTGTTTGACTTTTATTGTTGATGGAAGACAGAAGATCATTTGAATAAATCTCAAGATTCTGTGTTGGCTAAAATGACAAGCATTATGTCATAGTGATCCTTCCTCTCTTTAGTATCAATAGTGATACCGACGACACCATGATAGTTACATGTAAGATGCTTATTAAGTATTGCCAATAAACAGCAACAAATGTTCTCTCTAGTCTCTAGTTAGGTATCAACTAAAGAAACAAATTATAGTGCATGTAGATTAAATCCCAATCGATCTGTACTTTTCAGTATTTTGGAAGTGCCTACTCTCTTCCATGATTGATGACAGAGAGTTGTTCCTAGATCTGCACATTGTCTATGCTTATTAACACGAGATTTCTTTGCTCACTATATTGGACTGGACATTCTAGGTATTTTAATAATTGCTTGATTCTTCTTCTGGTTTTCGTTGCATCCATCCTTCTTCTTGGTGATTGAAATTTTCATATCATAATTAACGGAAATGATTTTCCTATTGCTCTTTGTCTAATGACTTTGTTTTGTTAATCACATTTCTGACATCCCCTGCAGATATACAATTACCAGGGTGTCTTTAATGAAGACTACAACATAGCAAATACACCAGCACCTAATGGTAAATGTTGTGAAGGATGTCTTCATGATTGTGACTATTTTATGACAAGGATGGAAATTTGGTTTTCTATTAACAAGATCCTAAAAGAAAGGTTTAAATTCAAATTTGTTTTTTAATTTTCATATCGAAGTAGTTTGCTTCGTCCTTAAATTGTCATAAATATGTTTTTGTCTTTCTCGTTAAATTTGTTGCATTTGATTTAAAAGAAATCTCAAGTTCACTCTTTCACAATATAAAACATAAACAATGATAACAGACATGATGTGTGGTTTAAAACATAAACTTGCTGGGTATAAAGTATAATGTAAAGTGTTACCAAAATAAAACAATTGATTTGATGTAATTCAAGGAACAGTATAGAACTTTTAGAAAGACAAAAAACAGCAGAAACAAGGGTGAAAGCTAAGGTTCCCAAGAAGATTTAAAGCAGAAACAAAATTTGTCTCTAATTTCAATATGTTCCTGTCATCTTTTCTTTACAGAACCACCAGTTAGCACTCCTGCTGTTGTCACTCAGGATGATGTTGGTGAAGAGGAGGAGGATGATGAACCTTCATTGAATGAAGATGACGACGACGACGATTTGGATGATGTGGATCAAGGAGAGGAATTGAGCACACAGCATTTAGTTTTAGCTCAGTTTGACAAGGTACTTTACCTCCCGTTTGATAGGTGCAGTTGCAGCATAATATGATAGAGTATTTTTAGAATCCAGCATGCCATTAAATATATATCATCATAATGCTTCATGTCATAGGTTACTCGTACCAAGAGTAGGTGGAAATGTACACTAAAGGATGGAATTATGCATATTAACAACAAGGACATTCTCTTCAACAAGGTGAATTTTCCCCTCAAGAACTTCAGGTTAGAATATTAACCGACTTGGGTTTTCATGGAAGCTTGGTTTATTTGGTTTGGCAGGCAACCGGGGAATTCGACTTCTGAATTTTTAATGGAGGCATCTTCATTGGGAGGGTTATTGGTAGCAGCAGTATTTTGAAAGAATTCCAGGAAGTTGGTTCATTGGGTGTTTAAGTTGTCTTCAGTTAATATTTGTTTTGTGAACGCACGAGAGGAAGAGGACATGTTGATGATTCCTTATGTTCATTTTGATGAATGTTATTAGCGTTTTGTATATAACGAATGAGAGCTCTTTTAGCCTTCAATGCATGGCAACTTGAGGATTTTCGAGTAAAATTTATCATTGCTCTAATGGAATATATTTGTAACTTCAACTCCGTATGCTCTTGGATTCTTT

mRNA sequence

TCTCTCTCTCTCTCTCTCTCTTCCTCTTCTCCCTTCTCCCTCGCCTCCTCTGCCCTTTTACTTCACACAACTCTACGAAATCCAATAAGCTTCTGCGGATTGTATGGATCTTCTTCCTTGAGTTTTCTCTCCAATTTTCTCCAAACACTCGATTCTTTCTGGGTTTCGCTTTTGGAGGGAATCGGAGGTAGACAGAGCTGAGGCGGATCCGATATGGCGACTTCCACGAGCTCTATCTACATCAATGTCATCGAGGATGTTATCAACAAGCTTCGCGATGAGTTCGTTGATAATGGTCCCGGGGAGGACGTTCTCAAGGAGCTTCAAGGAATGTGGGAGGCGAAAATGATGCAAGCGCGTGCCGTGACTGGTCCCATAGAGAGGTCTGCACCATCTAAGCCCACACCCGGAGGTCCTATAACTCCGGTTCACGATCTCAATGTTCCGTATGAGGGTACTGAAGAGTACGAAACTCCCACAGCTGATTTACTTTTTCCGCCGACGCCACTGCAGACTCCAATTCAAACCCCTTTACCAGGAACTGCTGACAACGCGATGTATAATATTCCTACTGGACCCAGCGACCACTCTGCTTCTGGAACTGATGCTTCTCCAGCTGCTACCACTCCTGGAGGTAGCGCTACTAACAATGTTGAGGTCAGATCTGGAAGGCCAACCCCATATATGCAACCACCTTCTTGGATGGGTCAAAGAACTCCTGTTGACGTTAATATTGCCTACGTGGAGGGGCGTGATGAACCAGACAGGGGAGCCGCTGGTGCTCACCCATCTCTTACACAAGACTTTTTCATGATGAACTCTGGGAAGCGTAAGCGTGATGATTTTGCTTCCCAGTACCAGACCAATGGGTTTATACCACAGCAAGATGGAGCTGGAGATGCTGCCCATAGTGTGTTTGAGATTGAGGTAGAAGAAATAGTATTGCCATTTGAATTGCCTAGACGTCAAGTGACTCCTCCTAGGTCCAATCGAAGCAAGGGGAACATCCTGCAAGATAAGCTAGATAAACCACAAAATAACCAAAATCCGCTGCCAAAGAATCCCTCACCTGGAATGGAGGATTCACAACAGCCTGTTCTCTCGAATATAAGTGGATGCAATGCTTTTGATGGGAGGCCTGGCGTTATCACTTCTCCAAAGAGTGCAACATCATCACATATTGGAAGATCATTATTGAAGATTCCACAACTTGATGGACCAATGCCTGATCCTTATGATGATGTGCTTTCAACACCCAACATATACAATTACCAGGGTGTCTTTAATGAAGACTACAACATAGCAAATACACCAGCACCTAATGAACCACCAGTTAGCACTCCTGCTGTTGTCACTCAGGATGATGTTGGTGAAGAGGAGGAGGATGATGAACCTTCATTGAATGAAGATGACGACGACGACGATTTGGATGATGTGGATCAAGGAGAGGAATTGAGCACACAGCATTTAGTTTTAGCTCAGTTTGACAAGGTTACTCGTACCAAGAGTAGGTGGAAATGTACACTAAAGGATGGAATTATGCATATTAACAACAAGGACATTCTCTTCAACAAGGTGAATTTTCCCCTCAAGAACTTCAGGCAACCGGGGAATTCGACTTCTGAATTTTTAATGGAGGCATCTTCATTGGGAGGGTTATTGGTAGCAGCAGTATTTTGAAAGAATTCCAGGAAGTTGGTTCATTGGGTGTTTAAGTTGTCTTCAGTTAATATTTGTTTTGTGAACGCACGAGAGGAAGAGGACATGTTGATGATTCCTTATGTTCATTTTGATGAATGTTATTAGCGTTTTGTATATAACGAATGAGAGCTCTTTTAGCCTTCAATGCATGGCAACTTGAGGATTTTCGAGTAAAATTTATCATTGCTCTAATGGAATATATTTGTAACTTCAACTCCGTATGCTCTTGGATTCTTT

Coding sequence (CDS)

ATGGCGACTTCCACGAGCTCTATCTACATCAATGTCATCGAGGATGTTATCAACAAGCTTCGCGATGAGTTCGTTGATAATGGTCCCGGGGAGGACGTTCTCAAGGAGCTTCAAGGAATGTGGGAGGCGAAAATGATGCAAGCGCGTGCCGTGACTGGTCCCATAGAGAGGTCTGCACCATCTAAGCCCACACCCGGAGGTCCTATAACTCCGGTTCACGATCTCAATGTTCCGTATGAGGGTACTGAAGAGTACGAAACTCCCACAGCTGATTTACTTTTTCCGCCGACGCCACTGCAGACTCCAATTCAAACCCCTTTACCAGGAACTGCTGACAACGCGATGTATAATATTCCTACTGGACCCAGCGACCACTCTGCTTCTGGAACTGATGCTTCTCCAGCTGCTACCACTCCTGGAGGTAGCGCTACTAACAATGTTGAGGTCAGATCTGGAAGGCCAACCCCATATATGCAACCACCTTCTTGGATGGGTCAAAGAACTCCTGTTGACGTTAATATTGCCTACGTGGAGGGGCGTGATGAACCAGACAGGGGAGCCGCTGGTGCTCACCCATCTCTTACACAAGACTTTTTCATGATGAACTCTGGGAAGCGTAAGCGTGATGATTTTGCTTCCCAGTACCAGACCAATGGGTTTATACCACAGCAAGATGGAGCTGGAGATGCTGCCCATAGTGTGTTTGAGATTGAGGTAGAAGAAATAGTATTGCCATTTGAATTGCCTAGACGTCAAGTGACTCCTCCTAGGTCCAATCGAAGCAAGGGGAACATCCTGCAAGATAAGCTAGATAAACCACAAAATAACCAAAATCCGCTGCCAAAGAATCCCTCACCTGGAATGGAGGATTCACAACAGCCTGTTCTCTCGAATATAAGTGGATGCAATGCTTTTGATGGGAGGCCTGGCGTTATCACTTCTCCAAAGAGTGCAACATCATCACATATTGGAAGATCATTATTGAAGATTCCACAACTTGATGGACCAATGCCTGATCCTTATGATGATGTGCTTTCAACACCCAACATATACAATTACCAGGGTGTCTTTAATGAAGACTACAACATAGCAAATACACCAGCACCTAATGAACCACCAGTTAGCACTCCTGCTGTTGTCACTCAGGATGATGTTGGTGAAGAGGAGGAGGATGATGAACCTTCATTGAATGAAGATGACGACGACGACGATTTGGATGATGTGGATCAAGGAGAGGAATTGAGCACACAGCATTTAGTTTTAGCTCAGTTTGACAAGGTTACTCGTACCAAGAGTAGGTGGAAATGTACACTAAAGGATGGAATTATGCATATTAACAACAAGGACATTCTCTTCAACAAGGTGAATTTTCCCCTCAAGAACTTCAGGCAACCGGGGAATTCGACTTCTGAATTTTTAATGGAGGCATCTTCATTGGGAGGGTTATTGGTAGCAGCAGTATTTTGA

Protein sequence

MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQARAVTGPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNIPTGPSDHSASGTDASPAATTPGGSATNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGRDEPDRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQTNGFIPQQDGAGDAAHSVFEIEVEEIVLPFELPRRQVTPPRSNRSKGNILQDKLDKPQNNQNPLPKNPSPGMEDSQQPVLSNISGCNAFDGRPGVITSPKSATSSHIGRSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNEDYNIANTPAPNEPPVSTPAVVTQDDVGEEEEDDEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKVNFPLKNFRQPGNSTSEFLMEASSLGGLLVAAVF

Homology

[Close]

BLAST of CmUC02G045480.1 vs. NCBI nr
Match: KAA0061868.1 (transcription initiation factor IIA subunit 1 [Cucumis melo var. makuwa] >TYK15388.1 transcription initiation factor IIA subunit 1 [Cucumis melo var. makuwa])

HSP 1 Score: 735.7 bits (1898), Expect = 2.6e-208
Identity = 381/463 (82.29%), Postives = 389/463 (84.02%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQARAVTGPIERSAP 60
           MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQA AVTGPIERSAP
Sbjct: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNIPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYN+PT
Sbjct: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120

Query: 121 GPSDHSASGTDASPAATTPGGSATNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180
           GPSDHSASGTD SPAATTPGGS  NNV VRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR
Sbjct: 121 GPSDHSASGTDDSPAATTPGGSGNNNVVVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180

Query: 181 DEPDRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQTNGFIPQQDGAGDAAHSVFEIEVE 240
           +E DRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQ NGFIPQQDGAGDAA+SVFEIE  
Sbjct: 181 EEADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIE-- 240

Query: 241 EIVLPFELPRRQVTPPRSNRSKGNILQDKLDKPQNNQNPLPKNPSPGMEDSQQPVLSNIS 300
                                                                     IS
Sbjct: 241 ----------------------------------------------------------IS 300

Query: 301 GCNAFDGRPGVITSPKSATSSHIGRSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNED 360
           GCN+ DGRPGVITS KSATSS+I RSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNED
Sbjct: 301 GCNSSDGRPGVITSAKSATSSYIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNED 360

Query: 361 YNIANTPAPNEPPVSTPAVVTQDDVGEEEEDDEPSLNEDDDDDDLDDVDQGEELSTQHLV 420
           YNIANTPAPN+PP  TPAVVTQDDV EEEED EPSLNEDDDDDDLDDVDQGEELSTQHLV
Sbjct: 361 YNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLV 403

Query: 421 LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKVNFPLKNFR 464
           LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKVNFPL+N+R
Sbjct: 421 LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKVNFPLQNYR 403

[Close]

BLAST of CmUC02G045480.1 vs. NCBI nr
Match: XP_038901376.1 (transcription initiation factor IIA subunit 1-like [Benincasa hispida])

HSP 1 Score: 732.3 bits (1889), Expect = 2.8e-207
Identity = 380/454 (83.70%), Postives = 383/454 (84.36%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQARAVTGPIERSAP 60
           MATSTSSIYINVIEDVINKLR+EFVDNGPGEDVLKELQGMWEAKMMQA AVTGPIERSAP
Sbjct: 1   MATSTSSIYINVIEDVINKLREEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNIPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNIPT
Sbjct: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNIPT 120

Query: 121 GPSDHSASGTDASPAATTPGGSATNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180
           GPSDHSASGTDASPAATTPGGS  NNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR
Sbjct: 121 GPSDHSASGTDASPAATTPGGSTNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180

Query: 181 DEPDRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQTNGFIPQQDGAGDAAHSVFEIEVE 240
           DEPDRGA GAHPSLTQDFFMMNSGKRKRDDFASQYQ NGFIPQQDGAGDA +SVFEIE  
Sbjct: 181 DEPDRGATGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAVNSVFEIE-- 240

Query: 241 EIVLPFELPRRQVTPPRSNRSKGNILQDKLDKPQNNQNPLPKNPSPGMEDSQQPVLSNIS 300
                                                                     IS
Sbjct: 241 ----------------------------------------------------------IS 300

Query: 301 GCNAFDGRPGVITSPKSATSSHIGRSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNED 360
           GCNA DGRPG ITS KS TSSHI RSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNED
Sbjct: 301 GCNASDGRPGFITSAKSPTSSHIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNED 360

Query: 361 YNIANTPAPNEPPVSTPAVVTQDDVGEEEEDDEPSLNEDDDDDDLDDVDQGEELSTQHLV 420
           YNIANTPAPN+PPVSTPAVVTQDDVGEEEEDDEPSLNEDDDDDDLDDVDQGEELSTQHLV
Sbjct: 361 YNIANTPAPNDPPVSTPAVVTQDDVGEEEEDDEPSLNEDDDDDDLDDVDQGEELSTQHLV 394

Query: 421 LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK 455
           LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK
Sbjct: 421 LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK 394

[Close]

BLAST of CmUC02G045480.1 vs. NCBI nr
Match: XP_008464085.1 (PREDICTED: transcription initiation factor IIA subunit 1 [Cucumis melo])

HSP 1 Score: 722.2 bits (1863), Expect = 2.9e-204
Identity = 375/454 (82.60%), Postives = 381/454 (83.92%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQARAVTGPIERSAP 60
           MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQA AVTGPIERSAP
Sbjct: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNIPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYN+PT
Sbjct: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120

Query: 121 GPSDHSASGTDASPAATTPGGSATNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180
           GPSDHSASGTD SPAATTPGGS  NNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR
Sbjct: 121 GPSDHSASGTDDSPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180

Query: 181 DEPDRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQTNGFIPQQDGAGDAAHSVFEIEVE 240
           +E DRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQ NGFIPQQDGAGDAA+SVFEIE  
Sbjct: 181 EEADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIE-- 240

Query: 241 EIVLPFELPRRQVTPPRSNRSKGNILQDKLDKPQNNQNPLPKNPSPGMEDSQQPVLSNIS 300
                                                                     IS
Sbjct: 241 ----------------------------------------------------------IS 300

Query: 301 GCNAFDGRPGVITSPKSATSSHIGRSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNED 360
           GCN+ DGRPGVITS KSATSS+I RSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNED
Sbjct: 301 GCNSSDGRPGVITSAKSATSSYIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNED 360

Query: 361 YNIANTPAPNEPPVSTPAVVTQDDVGEEEEDDEPSLNEDDDDDDLDDVDQGEELSTQHLV 420
           YNIANTPAPN+PP  TPAVVTQDDV EEEED EPSLNEDDDDDDLDDVDQGEELSTQHLV
Sbjct: 361 YNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLV 394

Query: 421 LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK 455
           LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK
Sbjct: 421 LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK 394

[Close]

BLAST of CmUC02G045480.1 vs. NCBI nr
Match: XP_004143132.2 (LOW QUALITY PROTEIN: transcription initiation factor IIA large subunit [Cucumis sativus])

HSP 1 Score: 716.5 bits (1848), Expect = 1.6e-202
Identity = 374/455 (82.20%), Postives = 379/455 (83.30%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQARAVTGPIERSAP 60
           MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQA AVTGPIERSAP
Sbjct: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNIPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPI  PLPGTADNAMYN+PT
Sbjct: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIXNPLPGTADNAMYNVPT 120

Query: 121 GPSDHSASGTDASPAATTPGGSATNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180
           GPSDHSASGTDASPAATTPGGS  NNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR
Sbjct: 121 GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180

Query: 181 DE-PDRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQTNGFIPQQDGAGDAAHSVFEIEV 240
           +E  DRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQ NGFIPQQDGAGDAA+SVFEIE 
Sbjct: 181 EEAADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIE- 240

Query: 241 EEIVLPFELPRRQVTPPRSNRSKGNILQDKLDKPQNNQNPLPKNPSPGMEDSQQPVLSNI 300
                                                                      I
Sbjct: 241 -----------------------------------------------------------I 300

Query: 301 SGCNAFDGRPGVITSPKSATSSHIGRSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 360
           SGCN+ DGRPG ITS KSATSSHI RSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE
Sbjct: 301 SGCNSSDGRPGAITSAKSATSSHIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 360

Query: 361 DYNIANTPAPNEPPVSTPAVVTQDDVGEEEEDDEPSLNEDDDDDDLDDVDQGEELSTQHL 420
           DYNIANTPAPN+PP  TPAVVTQDDV EEEED EPSLNEDDDDDDLDDVDQGEELSTQHL
Sbjct: 361 DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHL 395

Query: 421 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK 455
           VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK
Sbjct: 421 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK 395

[Close]

BLAST of CmUC02G045480.1 vs. NCBI nr
Match: XP_031745118.1 (LOW QUALITY PROTEIN: transcription initiation factor IIA subunit 1-like [Cucumis sativus])

HSP 1 Score: 716.5 bits (1848), Expect = 1.6e-202
Identity = 374/455 (82.20%), Postives = 379/455 (83.30%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQARAVTGPIERSAP 60
           MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQA AVTGPIERSAP
Sbjct: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNIPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQ PLPGTADNAMYN+PT
Sbjct: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQXPLPGTADNAMYNVPT 120

Query: 121 GPSDHSASGTDASPAATTPGGSATNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180
           GPSDHSASGTDASPAATTPGGS  NNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR
Sbjct: 121 GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180

Query: 181 DE-PDRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQTNGFIPQQDGAGDAAHSVFEIEV 240
           +E  DRGAAGAHPSLTQDFFMMN GKRKRDDFASQYQ NGFIPQQDGAGDAA+SVFEIE 
Sbjct: 181 EEAADRGAAGAHPSLTQDFFMMNXGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIE- 240

Query: 241 EEIVLPFELPRRQVTPPRSNRSKGNILQDKLDKPQNNQNPLPKNPSPGMEDSQQPVLSNI 300
                                                                      I
Sbjct: 241 -----------------------------------------------------------I 300

Query: 301 SGCNAFDGRPGVITSPKSATSSHIGRSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 360
           SGCN+ DGRPG ITS KSATSSHI RSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE
Sbjct: 301 SGCNSSDGRPGAITSAKSATSSHIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 360

Query: 361 DYNIANTPAPNEPPVSTPAVVTQDDVGEEEEDDEPSLNEDDDDDDLDDVDQGEELSTQHL 420
           DYNIANTPAPN+PP  TPAVVTQDDV EEEED EPSLNEDDDDDDLDDVDQGEELSTQHL
Sbjct: 361 DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHL 395

Query: 421 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK 455
           VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK
Sbjct: 421 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK 395

[Close]

BLAST of CmUC02G045480.1 vs. ExPASy Swiss-Prot
Match: Q54G80 (Transcription initiation factor IIA subunit 1 OS=Dictyostelium discoideum OX=44689 GN=gtf2a1 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 4.8e-08
Identity = 63/202 (31.19%), Postives = 94/202 (46.53%), Query Frame = 0


Query: 275 NNQNPLPKNPSPGMEDSQQPVLSNISGCNAFDGRPGVITSPKSATSSHIGRSLLKI---- 334
           N Q  LP  P   + +   P +++ +G N  +       S  S+ ++++  SL  I    
Sbjct: 110 NPQQYLP--PQKEVSNGTSPTMNSSNGSNNNNNNNNSNNSSNSSNNNNLPSSLRSIMNPM 169

Query: 335 PQLDGPMPDPYDDVLSTPNIYNYQGVFNEDYNIANTPAP----------NEPPVSTPAVV 394
           PQ DG + +  +D  +  N  +     N+D NI                +E       + 
Sbjct: 170 PQNDGTLDESDNDDDNNNNNNDNDNENNKD-NIDKLIIDGFKKNFNFNGDEVIPQNDGLN 229

Query: 395 TQDDVGEEE------EDDEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKVTRTKSRW 454
             DD+ +EE      + +E SL  D DDDD DD D       +H VL Q++KV+R K++ 
Sbjct: 230 DDDDLDDEEIGGGGGKVEEDSLGSDLDDDDDDDPDP----IIEHFVLCQYEKVSRIKNKR 289

Query: 455 KCTLKDGIMHINNKDILFNKVN 457
           KC  KDGIMH+N KD LFNK N
Sbjct: 290 KCNFKDGIMHLNGKDTLFNKAN 304

[Close]

BLAST of CmUC02G045480.1 vs. ExPASy Swiss-Prot
Match: O08949 (Transcription initiation factor IIA subunit 1 OS=Rattus norvegicus OX=10116 GN=Gtf2a1 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.0e-06
Identity = 116/475 (24.42%), Postives = 175/475 (36.84%), Query Frame = 0


Query: 8   IYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQARAVTG--------PIERSA 67
           +Y +VIEDVIN +RD F+D+G  E VL EL+ +WE K+MQ+RAV G         ++   
Sbjct: 13  LYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMQSRAVDGFHSEEQQLLLQVQQ 72

Query: 68  PSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNIP 127
             +P         H      + T   +  T  +L P +   T  Q  +P +      N  
Sbjct: 73  QHQPQQQQHHHHHHHQQAQPQQTVPQQAQTQQVLIPASQQATAPQVIVPDSKLIQHMNAS 132

Query: 128 TGPSDHSASGTDASPAATTPGGSATNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEG 187
           +  S  + + T A PA  TP      N                  GQ   V         
Sbjct: 133 SITSAAATAATLALPAGVTPVQQILTN-----------------SGQLLQV--------- 192

Query: 188 RDEPDRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQTNGFIPQQDGAGDAAHSVFEIEV 247
                R A GA                       QY    F PQQ            + +
Sbjct: 193 ----VRAANGA-----------------------QYI---FQPQQ-----------SVVL 252

Query: 248 EEIVLPFELPRRQVTPPRSNRSKGNILQDKLDKPQNNQNPLPKNPSPGMEDSQQPVLSNI 307
           ++ V+P   P     P         ++Q  L        PLP   SP      QP     
Sbjct: 253 QQQVIPQMQPGGVQAP---------VIQQVL-------APLPGGISPQTGVIIQPQQILF 312

Query: 308 SGCNAFDGRPGVITSPKSATSSHIGRSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 367
           +G N     P  + +P  A +        +IP      P                     
Sbjct: 313 TG-NKTQVIPTTVAAPTPAQA--------QIPAAGQQQPQA------------------- 370

Query: 368 DYNIANTPAPNEPPVSTPAVVTQDDVGEEEEDDEPSLNEDDDDD---------------- 427
                  PA  + P+      T D   EE+ED+E   ++D+++D                
Sbjct: 373 ------QPAQQQAPLVLQVDGTGDTSSEEDEDEEEDYDDDEEEDKEKDGAEDGQVEEEPL 370

Query: 428 -DLDDV--DQGEEL-STQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK 455
              DDV  ++G+EL  T+++V+ Q+DK+ R+K++WK  LKDGIM++N +D +F+K
Sbjct: 433 NSEDDVSDEEGQELFDTENVVVCQYDKIHRSKNKWKFHLKDGIMNLNGRDYIFSK 370

[Close]

BLAST of CmUC02G045480.1 vs. ExPASy Swiss-Prot
Match: P52655 (Transcription initiation factor IIA subunit 1 OS=Homo sapiens OX=9606 GN=GTF2A1 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 5.9e-06
Identity = 118/475 (24.84%), Postives = 178/475 (37.47%), Query Frame = 0


Query: 8   IYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQARAVTG--------PIERSA 67
           +Y +VIEDVIN +RD F+D+G  E VL EL+ +WE K+MQ+RAV G         ++   
Sbjct: 13  LYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMQSRAVDGFHSEEQQLLLQVQQ 72

Query: 68  PSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNIP 127
             +P         H      + T   +  T  +L P +   T  Q  +P +      N  
Sbjct: 73  QHQPQQQQHHHHHHHQQAQPQQTVPQQAQTQQVLIPASQQATAPQVIVPDSKLIQHMN-- 132

Query: 128 TGPSDHSASGTDASPAATTPGGSATNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEG 187
              S+ SA+ T A+ A   P G             TP  Q  +  GQ   V         
Sbjct: 133 --ASNMSAAATAATLA--LPAG------------VTPVQQILTNSGQLLQV--------- 192

Query: 188 RDEPDRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQTNGFIPQQDGAGDAAHSVFEIEV 247
                R A GA                       QY    F PQQ            + +
Sbjct: 193 ----VRAANGA-----------------------QYI---FQPQQ-----------SVVL 252

Query: 248 EEIVLPFELPRRQVTPPRSNRSKGNILQDKLDKPQNNQNPLPKNPSPGMEDSQQPVLSNI 307
           ++ V+P   P     P         ++Q  L        PLP   SP             
Sbjct: 253 QQQVIPQMQPGGVQAP---------VIQQVL-------APLPGGISP------------- 312

Query: 308 SGCNAFDGRPGVITSPKSATSSHIGRSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 367
                   + GVI  P+    +  G     IP             ++ P     Q     
Sbjct: 313 --------QTGVIIQPQQILFT--GNKTQVIP-----------TTVAAPTPAQAQITATG 369

Query: 368 DYNIANTPAPNEPPVSTPAVVTQDDVGEEEEDDEPSLNEDDDDD---------------- 427
                  PA  + P+      T D   EE+ED+E   ++D+++D                
Sbjct: 373 QQQPQAQPAQTQAPLVLQVDGTGDTSSEEDEDEEEDYDDDEEEDKEKDGAEDGQVEEEPL 369

Query: 428 -DLDDV--DQGEEL-STQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK 455
              DDV  ++G+EL  T+++V+ Q+DK+ R+K++WK  LKDGIM++N +D +F+K
Sbjct: 433 NSEDDVSDEEGQELFDTENVVVCQYDKIHRSKNKWKFHLKDGIMNLNGRDYIFSK 369

[Close]

BLAST of CmUC02G045480.1 vs. ExPASy Swiss-Prot
Match: Q5RCU0 (Transcription initiation factor IIA subunit 1 OS=Pongo abelii OX=9601 GN=GTF2A1 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.7e-05
Identity = 118/475 (24.84%), Postives = 178/475 (37.47%), Query Frame = 0


Query: 8   IYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQARAVTG--------PIERSA 67
           +Y +VIEDVIN +RD F+D+G  E VL EL+ +WE K+MQ+RAV G         ++   
Sbjct: 13  LYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMQSRAVDGFHSEEQQLLLQVQQ 72

Query: 68  PSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNIP 127
             +P         H      + T   +  T  +L P +   T  Q  +P +      N  
Sbjct: 73  QHQPQQQQHHHHHHHQQAQPQQTVPQQAQTQQVLIPASQQATAPQVIVPDSKLIQHMN-- 132

Query: 128 TGPSDHSASGTDASPAATTPGGSATNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEG 187
              S+ SA+ T A+ A   P G             TP  Q  +  GQ   V         
Sbjct: 133 --ASNMSAAATAATLA--LPAG------------VTPVQQILTNSGQLLQV--------- 192

Query: 188 RDEPDRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQTNGFIPQQDGAGDAAHSVFEIEV 247
                R A GA                       QY    F PQQ            + +
Sbjct: 193 ----VRVANGA-----------------------QYI---FQPQQ-----------SVVL 252

Query: 248 EEIVLPFELPRRQVTPPRSNRSKGNILQDKLDKPQNNQNPLPKNPSPGMEDSQQPVLSNI 307
           ++ V+P   P     P         ++Q  L        PLP   SP             
Sbjct: 253 QQQVIPQMQPGGVQAP---------VIQQVL-------APLPGGISP------------- 312

Query: 308 SGCNAFDGRPGVITSPKSATSSHIGRSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 367
                   + GVI  P+    +  G     IP             ++ P     Q     
Sbjct: 313 --------QTGVIIQPQQILFT--GNKTQVIP-----------TTVAAPTPAQAQITATG 369

Query: 368 DYNIANTPAPNEPPVSTPAVVTQDDVGEEEEDDEPSLNEDDDDD---------------- 427
                  PA  + P+      T D   EE+ED+E   ++D+++D                
Sbjct: 373 HQQPQAQPAQTQAPLVLQVDGTGDTSSEEDEDEEEDYDDDEEEDKEKDGAEDGQVEEEPL 369

Query: 428 -DLDDV--DQGEEL-STQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK 455
              DDV  ++G+EL  T+++V+ Q+DK+ R+K++WK  LKDGIM++N +D +F+K
Sbjct: 433 NSEDDVSDEEGQELFDTENVVVCQYDKIHRSKNKWKFHLKDGIMNLNGRDYIFSK 369

[Close]

BLAST of CmUC02G045480.1 vs. ExPASy Swiss-Prot
Match: P52654 (Transcription initiation factor IIA subunit 1 OS=Drosophila melanogaster OX=7227 GN=TfIIA-L PE=1 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 3.8e-05
Identity = 54/225 (24.00%), Postives = 99/225 (44.00%), Query Frame = 0


Query: 252 QVTPPRSNRSKGNILQDKLDKPQNNQNPLP--KNPSPGMEDSQQPVLSNISGCNAFDGRP 311
           Q  PP    S  +++Q +     + Q  +P      P         L + +G  + + R 
Sbjct: 137 QNPPPLHPTSAASMMQKQQQAASSGQGSIPIVATLDPNRIMPVNITLPSPAGSASSESRV 196

Query: 312 GVITSPKSA---------TSSHIGRSLLKIPQ--LDGPMPDPYDDVLSTPNIYNYQGVFN 371
             I  P SA          ++H+  S++ +P       +    +  LS+ N         
Sbjct: 197 LTIQVPASALQENQLTQILTAHLISSIMSLPTTLASSVLQQHVNAALSSANHQKTLAAAK 256

Query: 372 EDYNIANTPAPNEPPVSTPAVVTQDDVGEEEEDDEPSLNED-------DDDDDLDDVDQG 431
           +     ++   +E   S   +   DD   +++DDE + +ED       + +DD+ D D  
Sbjct: 257 QLDGALDSSDEDESEESDDNIDNDDDDDLDKDDDEDAEHEDAAEEEPLNSEDDVTDEDSA 316

Query: 432 EELSTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKVN 457
           E   T ++++ Q+DK+TR++++WK  LKDGIM++  KD +F K N
Sbjct: 317 EMFDTDNVIVCQYDKITRSRNKWKFYLKDGIMNMRGKDYVFQKSN 361

HSP 2 Score: 49.3 bits (116), Expect = 1.4e-04
Identity = 25/63 (39.68%), Postives = 37/63 (58.73%), Query Frame = 0


Query: 3  TSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQARAVTGPIERSAPSK 62
          TS   +Y  VIEDVI  +RD F+D G  E VL+E++ +W  K++ ++AV    +    S 
Sbjct: 6  TSVLKVYHAVIEDVITNVRDAFLDEGVDEQVLQEMKQVWRNKLLASKAVELSPDSGDGSH 65

Query: 63 PTP 66
          P P
Sbjct: 66 PPP 68

[Close]

BLAST of CmUC02G045480.1 vs. ExPASy TrEMBL
Match: A0A5D3CVW1 (Transcription initiation factor IIA subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00280 PE=3 SV=1)

HSP 1 Score: 735.7 bits (1898), Expect = 1.2e-208
Identity = 381/463 (82.29%), Postives = 389/463 (84.02%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQARAVTGPIERSAP 60
           MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQA AVTGPIERSAP
Sbjct: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNIPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYN+PT
Sbjct: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120

Query: 121 GPSDHSASGTDASPAATTPGGSATNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180
           GPSDHSASGTD SPAATTPGGS  NNV VRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR
Sbjct: 121 GPSDHSASGTDDSPAATTPGGSGNNNVVVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180

Query: 181 DEPDRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQTNGFIPQQDGAGDAAHSVFEIEVE 240
           +E DRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQ NGFIPQQDGAGDAA+SVFEIE  
Sbjct: 181 EEADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIE-- 240

Query: 241 EIVLPFELPRRQVTPPRSNRSKGNILQDKLDKPQNNQNPLPKNPSPGMEDSQQPVLSNIS 300
                                                                     IS
Sbjct: 241 ----------------------------------------------------------IS 300

Query: 301 GCNAFDGRPGVITSPKSATSSHIGRSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNED 360
           GCN+ DGRPGVITS KSATSS+I RSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNED
Sbjct: 301 GCNSSDGRPGVITSAKSATSSYIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNED 360

Query: 361 YNIANTPAPNEPPVSTPAVVTQDDVGEEEEDDEPSLNEDDDDDDLDDVDQGEELSTQHLV 420
           YNIANTPAPN+PP  TPAVVTQDDV EEEED EPSLNEDDDDDDLDDVDQGEELSTQHLV
Sbjct: 361 YNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLV 403

Query: 421 LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKVNFPLKNFR 464
           LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKVNFPL+N+R
Sbjct: 421 LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKVNFPLQNYR 403

[Close]

BLAST of CmUC02G045480.1 vs. ExPASy TrEMBL
Match: A0A1S3CM61 (transcription initiation factor IIA subunit 1 OS=Cucumis melo OX=3656 GN=LOC103502057 PE=3 SV=1)

HSP 1 Score: 722.2 bits (1863), Expect = 1.4e-204
Identity = 375/454 (82.60%), Postives = 381/454 (83.92%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQARAVTGPIERSAP 60
           MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQA AVTGPIERSAP
Sbjct: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNIPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYN+PT
Sbjct: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120

Query: 121 GPSDHSASGTDASPAATTPGGSATNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180
           GPSDHSASGTD SPAATTPGGS  NNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR
Sbjct: 121 GPSDHSASGTDDSPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180

Query: 181 DEPDRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQTNGFIPQQDGAGDAAHSVFEIEVE 240
           +E DRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQ NGFIPQQDGAGDAA+SVFEIE  
Sbjct: 181 EEADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIE-- 240

Query: 241 EIVLPFELPRRQVTPPRSNRSKGNILQDKLDKPQNNQNPLPKNPSPGMEDSQQPVLSNIS 300
                                                                     IS
Sbjct: 241 ----------------------------------------------------------IS 300

Query: 301 GCNAFDGRPGVITSPKSATSSHIGRSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNED 360
           GCN+ DGRPGVITS KSATSS+I RSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNED
Sbjct: 301 GCNSSDGRPGVITSAKSATSSYIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNED 360

Query: 361 YNIANTPAPNEPPVSTPAVVTQDDVGEEEEDDEPSLNEDDDDDDLDDVDQGEELSTQHLV 420
           YNIANTPAPN+PP  TPAVVTQDDV EEEED EPSLNEDDDDDDLDDVDQGEELSTQHLV
Sbjct: 361 YNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLV 394

Query: 421 LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK 455
           LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK
Sbjct: 421 LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK 394

[Close]

BLAST of CmUC02G045480.1 vs. ExPASy TrEMBL
Match: A0A0A0KE66 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188660 PE=3 SV=1)

HSP 1 Score: 720.7 bits (1859), Expect = 4.1e-204
Identity = 376/455 (82.64%), Postives = 381/455 (83.74%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQARAVTGPIERSAP 60
           MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQA AVTGPIERSAP
Sbjct: 135 MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 194

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNIPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYN+PT
Sbjct: 195 SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 254

Query: 121 GPSDHSASGTDASPAATTPGGSATNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180
           GPSDHSASGTDASPAATTPGGS  NNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR
Sbjct: 255 GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 314

Query: 181 DE-PDRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQTNGFIPQQDGAGDAAHSVFEIEV 240
           +E  DRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQ NGFIPQQDGAGDAA+SVFEIE 
Sbjct: 315 EEAADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIE- 374

Query: 241 EEIVLPFELPRRQVTPPRSNRSKGNILQDKLDKPQNNQNPLPKNPSPGMEDSQQPVLSNI 300
                                                                      I
Sbjct: 375 -----------------------------------------------------------I 434

Query: 301 SGCNAFDGRPGVITSPKSATSSHIGRSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 360
           SGCN+ DGRPG ITS KSATSSHI RSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE
Sbjct: 435 SGCNSSDGRPGAITSAKSATSSHIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 494

Query: 361 DYNIANTPAPNEPPVSTPAVVTQDDVGEEEEDDEPSLNEDDDDDDLDDVDQGEELSTQHL 420
           DYNIANTPAPN+PP  TPAVVTQDDV EEEED EPSLNEDDDDDDLDDVDQGEELSTQHL
Sbjct: 495 DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHL 529

Query: 421 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK 455
           VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK
Sbjct: 555 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK 529

[Close]

BLAST of CmUC02G045480.1 vs. ExPASy TrEMBL
Match: A0A6J1J8T3 (transcription initiation factor IIA subunit 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484486 PE=3 SV=1)

HSP 1 Score: 699.1 bits (1803), Expect = 1.3e-197
Identity = 365/454 (80.40%), Postives = 381/454 (83.92%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQARAVTGPIERSAP 60
           MA STSSIYINVIEDV+NKLRDEF DNGPGEDVLKELQGMWEAKMMQA AV GPIERSAP
Sbjct: 1   MAISTSSIYINVIEDVVNKLRDEFTDNGPGEDVLKELQGMWEAKMMQAGAVNGPIERSAP 60

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNIPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYN+PT
Sbjct: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120

Query: 121 GPSDHSASGTDASPAATTPGGSATNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180
           GPSDHSASGTDASPA TTPGGSA +NV+VRSGRPT +MQPPSWMGQ+ PVDVNIAYVEGR
Sbjct: 121 GPSDHSASGTDASPAVTTPGGSA-SNVDVRSGRPTQFMQPPSWMGQKAPVDVNIAYVEGR 180

Query: 181 DEPDRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQTNGFIPQQDGAGDAAHSVFEIEVE 240
           DE DRG    HP+LTQDFFMMNSGKRKRD FASQYQTNGFIPQQDGAGDAA+SVFEIE  
Sbjct: 181 DEADRGV--PHPALTQDFFMMNSGKRKRDGFASQYQTNGFIPQQDGAGDAANSVFEIESL 240

Query: 241 EIVLPFELPRRQVTPPRSNRSKGNILQDKLDKPQNNQNPLPKNPSPGMEDSQQPVLSNIS 300
           +++                  KG +LQ                               IS
Sbjct: 241 KLL------------------KGKLLQ-------------------------------IS 300

Query: 301 GCNAFDGRPGVITSPKSATSSHIGRSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNED 360
           GCNA DGRPGVITS KSAT +HI RSL KIPQLDGP+PDPYDDVLSTPNIYNYQGVFNED
Sbjct: 301 GCNASDGRPGVITSAKSATLTHIKRSLFKIPQLDGPIPDPYDDVLSTPNIYNYQGVFNED 360

Query: 361 YNIANTPAPNEPPVSTPAVVTQDDVGEEEEDDEPSLNEDDDDDDLDDVDQGEELSTQHLV 420
           YNIANTPAPN+PP  TPAVVTQDDVGEEEEDDEPSLNEDDDDDDLDDVDQGEE+STQHLV
Sbjct: 361 YNIANTPAPNDPPAGTPAVVTQDDVGEEEEDDEPSLNEDDDDDDLDDVDQGEEVSTQHLV 402

Query: 421 LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK 455
           LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK
Sbjct: 421 LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK 402

[Close]

BLAST of CmUC02G045480.1 vs. ExPASy TrEMBL
Match: A0A6J1FUX4 (transcription initiation factor IIA subunit 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448672 PE=3 SV=1)

HSP 1 Score: 699.1 bits (1803), Expect = 1.3e-197
Identity = 365/454 (80.40%), Postives = 381/454 (83.92%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQARAVTGPIERSAP 60
           MA STSSIYINVIEDV+NKLRDEF DNGPGEDVLKELQGMWEAKMMQA AV GPIERSAP
Sbjct: 1   MAISTSSIYINVIEDVVNKLRDEFTDNGPGEDVLKELQGMWEAKMMQAGAVNGPIERSAP 60

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNIPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYN+PT
Sbjct: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120

Query: 121 GPSDHSASGTDASPAATTPGGSATNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180
           GPSDHSASGTDASPA TTPGGSA +NV+VRSGRPT +MQPPSWMGQ+ PVDVNIAYVEGR
Sbjct: 121 GPSDHSASGTDASPAVTTPGGSA-SNVDVRSGRPTQFMQPPSWMGQKAPVDVNIAYVEGR 180

Query: 181 DEPDRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQTNGFIPQQDGAGDAAHSVFEIEVE 240
           DE DRG    HP+LTQDFFMMNSGKRKRD FASQYQTNGFIPQQDGAGDAA+SVFEIE  
Sbjct: 181 DEADRGV--PHPALTQDFFMMNSGKRKRDGFASQYQTNGFIPQQDGAGDAANSVFEIESL 240

Query: 241 EIVLPFELPRRQVTPPRSNRSKGNILQDKLDKPQNNQNPLPKNPSPGMEDSQQPVLSNIS 300
           +++                  KG +LQ                               IS
Sbjct: 241 KLL------------------KGKLLQ-------------------------------IS 300

Query: 301 GCNAFDGRPGVITSPKSATSSHIGRSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNED 360
           GCNA DGRPGVITS KSAT +HI RSL KIPQLDGP+PDPYDDVLSTPNIYNYQGVFNED
Sbjct: 301 GCNASDGRPGVITSAKSATLTHIERSLFKIPQLDGPIPDPYDDVLSTPNIYNYQGVFNED 360

Query: 361 YNIANTPAPNEPPVSTPAVVTQDDVGEEEEDDEPSLNEDDDDDDLDDVDQGEELSTQHLV 420
           YNIANTPAPN+PP  TPAVVTQDDVGEEEEDDEPSLNEDDDDDDLDDVDQGEE+STQHLV
Sbjct: 361 YNIANTPAPNDPPAGTPAVVTQDDVGEEEEDDEPSLNEDDDDDDLDDVDQGEEVSTQHLV 402

Query: 421 LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK 455
           LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK
Sbjct: 421 LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK 402

[Close]

BLAST of CmUC02G045480.1 vs. TAIR 10
Match: AT1G07480.1 (Transcription factor IIA, alpha/beta subunit )

HSP 1 Score: 416.8 bits (1070), Expect = 2.4e-116
Identity = 243/455 (53.41%), Postives = 294/455 (64.62%), Query Frame = 0


Query: 3   TSTSSIYINVIEDVINKLRDEFVDN-GPGEDVLKELQGMWEAKMMQARAVTGPIERSAPS 62
           T+TS++YI+VIEDV+NK+R+EF++N GPGE VL ELQG+WE KMMQA  + GPIERS+  
Sbjct: 5   TTTSAVYIHVIEDVVNKVREEFINNGGPGESVLSELQGIWETKMMQAGVLNGPIERSSAQ 64

Query: 63  KPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADN-AMYNIPT 122
           KPTPGGP+T  HDLNVPYEGTEEYETPTA++LFPPTPLQTP+ TPLPGTADN +MYNIPT
Sbjct: 65  KPTPGGPLT--HDLNVPYEGTEEYETPTAEMLFPPTPLQTPLPTPLPGTADNSSMYNIPT 124

Query: 123 GPSDHSASGTDASPAATTPGGSATNNVEVRSGRPTPYMQPPS-WMGQRTPVDVNIAYVEG 182
           G SD+            TPG     N++V++ RP+PYM PPS W   R  +DVN+AYV+G
Sbjct: 125 GSSDY-----------PTPGTENGVNIDVKA-RPSPYMPPPSPWTNPR--LDVNVAYVDG 184

Query: 183 RDEPDRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQTNGFIPQQDGAGDAAHSVFEIEV 242
           RDEP+RG   ++   TQD F+ +SGKRKRDD +  YQ  G IPQQDGAGDA         
Sbjct: 185 RDEPERG--NSNQQFTQDLFVPSSGKRKRDDSSGHYQNGGSIPQQDGAGDAI-------- 244

Query: 243 EEIVLPFELPRRQVTPPRSNRSKGNILQDKLDKPQNNQNPLPKNPSPGMEDSQQPVLSNI 302
                                                       P    E          
Sbjct: 245 --------------------------------------------PEANFE---------- 304

Query: 303 SGCNAFDGRPGVITSPKSATSSHIGRSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 362
             C+AF     + +            S  KIPQ+DGPMPDPYD++LSTPNIY+YQG  +E
Sbjct: 305 --CDAF----RITSIGDRKVPRDFFSSSSKIPQVDGPMPDPYDEMLSTPNIYSYQGP-SE 364

Query: 363 DYNIANTPAPNEPPVSTPAVVTQDDVGEEEEDDEPSLNEDDDDDDLDDVDQGEELSTQHL 422
           ++N A TPAPNE   STP  V  D +    EDDE  LNEDDDDD+LDD++ GE+++TQHL
Sbjct: 365 EFNEARTPAPNEIQTSTPVAVQNDII----EDDEELLNEDDDDDELDDLESGEDMNTQHL 368

Query: 423 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK 455
           VLAQFDKVTRTKSRWKC+LKDGIMHIN+KDILFNK
Sbjct: 425 VLAQFDKVTRTKSRWKCSLKDGIMHINDKDILFNK 368

[Close]

BLAST of CmUC02G045480.1 vs. TAIR 10
Match: AT1G07480.2 (Transcription factor IIA, alpha/beta subunit )

HSP 1 Score: 416.8 bits (1070), Expect = 2.4e-116
Identity = 243/455 (53.41%), Postives = 294/455 (64.62%), Query Frame = 0


Query: 3   TSTSSIYINVIEDVINKLRDEFVDN-GPGEDVLKELQGMWEAKMMQARAVTGPIERSAPS 62
           T+TS++YI+VIEDV+NK+R+EF++N GPGE VL ELQG+WE KMMQA  + GPIERS+  
Sbjct: 5   TTTSAVYIHVIEDVVNKVREEFINNGGPGESVLSELQGIWETKMMQAGVLNGPIERSSAQ 64

Query: 63  KPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADN-AMYNIPT 122
           KPTPGGP+T  HDLNVPYEGTEEYETPTA++LFPPTPLQTP+ TPLPGTADN +MYNIPT
Sbjct: 65  KPTPGGPLT--HDLNVPYEGTEEYETPTAEMLFPPTPLQTPLPTPLPGTADNSSMYNIPT 124

Query: 123 GPSDHSASGTDASPAATTPGGSATNNVEVRSGRPTPYMQPPS-WMGQRTPVDVNIAYVEG 182
           G SD+            TPG     N++V++ RP+PYM PPS W   R  +DVN+AYV+G
Sbjct: 125 GSSDY-----------PTPGTENGVNIDVKA-RPSPYMPPPSPWTNPR--LDVNVAYVDG 184

Query: 183 RDEPDRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQTNGFIPQQDGAGDAAHSVFEIEV 242
           RDEP+RG   ++   TQD F+ +SGKRKRDD +  YQ  G IPQQDGAGDA         
Sbjct: 185 RDEPERG--NSNQQFTQDLFVPSSGKRKRDDSSGHYQNGGSIPQQDGAGDAI-------- 244

Query: 243 EEIVLPFELPRRQVTPPRSNRSKGNILQDKLDKPQNNQNPLPKNPSPGMEDSQQPVLSNI 302
                                                       P    E          
Sbjct: 245 --------------------------------------------PEANFE---------- 304

Query: 303 SGCNAFDGRPGVITSPKSATSSHIGRSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 362
             C+AF     + +            S  KIPQ+DGPMPDPYD++LSTPNIY+YQG  +E
Sbjct: 305 --CDAF----RITSIGDRKVPRDFFSSSSKIPQVDGPMPDPYDEMLSTPNIYSYQGP-SE 364

Query: 363 DYNIANTPAPNEPPVSTPAVVTQDDVGEEEEDDEPSLNEDDDDDDLDDVDQGEELSTQHL 422
           ++N A TPAPNE   STP  V  D +    EDDE  LNEDDDDD+LDD++ GE+++TQHL
Sbjct: 365 EFNEARTPAPNEIQTSTPVAVQNDII----EDDEELLNEDDDDDELDDLESGEDMNTQHL 368

Query: 423 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK 455
           VLAQFDKVTRTKSRWKC+LKDGIMHIN+KDILFNK
Sbjct: 425 VLAQFDKVTRTKSRWKCSLKDGIMHINDKDILFNK 368

[Close]

BLAST of CmUC02G045480.1 vs. TAIR 10
Match: AT1G07470.1 (Transcription factor IIA, alpha/beta subunit )

HSP 1 Score: 416.4 bits (1069), Expect = 3.2e-116
Identity = 243/455 (53.41%), Postives = 294/455 (64.62%), Query Frame = 0


Query: 3   TSTSSIYINVIEDVINKLRDEFVDN-GPGEDVLKELQGMWEAKMMQARAVTGPIERSAPS 62
           T+TS++YI+VIEDV+NK+R+EF++N GPGE VL ELQG+WE KMMQA  + GPIERS+  
Sbjct: 5   TTTSAVYIHVIEDVVNKVREEFINNGGPGESVLSELQGIWETKMMQAGVLNGPIERSSAQ 64

Query: 63  KPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADN-AMYNIPT 122
           KPTPGGP+T  HDLNVPYEGTEEYETPTA++LFPPTPLQTP+ TPLPGTADN +MYNIPT
Sbjct: 65  KPTPGGPLT--HDLNVPYEGTEEYETPTAEMLFPPTPLQTPLPTPLPGTADNSSMYNIPT 124

Query: 123 GPSDHSASGTDASPAATTPGGSATNNVEVRSGRPTPYMQPPS-WMGQRTPVDVNIAYVEG 182
           G SD+            TPG     N++V++ RP+PYM PPS W   R  +DVN+AYV+G
Sbjct: 125 GSSDY-----------PTPGTENGVNIDVKA-RPSPYMPPPSPWTNPR--LDVNVAYVDG 184

Query: 183 RDEPDRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQTNGFIPQQDGAGDAAHSVFEIEV 242
           RDEP+RG   ++   TQD F+ +SGKRKRDD ++ YQ  G IPQQDGA DA         
Sbjct: 185 RDEPERG--NSNQQFTQDLFVPSSGKRKRDDSSAHYQNGGSIPQQDGASDAIPEA----- 244

Query: 243 EEIVLPFELPRRQVTPPRSNRSKGNILQDKLDKPQNNQNPLPKNPSPGMEDSQQPVLSNI 302
                 FE    ++T                                             
Sbjct: 245 -----NFECAALRIT--------------------------------------------- 304

Query: 303 SGCNAFDGRPGVITSPKSATSSHIGRSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 362
                           +      IG S  KIPQ+DGPMPDPYD++LSTPNIY+YQG  NE
Sbjct: 305 ------------YVGDRKIPRDLIGSS-SKIPQVDGPMPDPYDEMLSTPNIYSYQGP-NE 364

Query: 363 DYNIANTPAPNEPPVSTPAVVTQDDVGEEEEDDEPSLNEDDDDDDLDDVDQGEELSTQHL 422
           ++N A TPAPNE   STP  V  D +    EDDE  LNEDDDDD+LDD++ GE+++TQHL
Sbjct: 365 EFNEARTPAPNEIQTSTPVAVPNDII----EDDEELLNEDDDDDELDDLESGEDMNTQHL 368

Query: 423 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK 455
           VLAQFDKVTRTKSRWKC+LKDGIMHIN+KDILFNK
Sbjct: 425 VLAQFDKVTRTKSRWKCSLKDGIMHINDKDILFNK 368

[Close]

BLAST of CmUC02G045480.1 vs. TAIR 10
Match: AT5G59230.1 (transcription factor-related )

HSP 1 Score: 60.5 bits (145), Expect = 4.4e-09
Identity = 32/73 (43.84%), Postives = 55/73 (75.34%), Query Frame = 0


Query: 382 QDDVGEEEEDDEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKVTRTKSRWKCTLKDG 441
           +D+   + +++E  LNEDDDD++ DD+D  ++++ QHLV+ QFDKV R+K++W+C    G
Sbjct: 109 RDEAIVDVDENEEPLNEDDDDEE-DDIDD-DDMNIQHLVMCQFDKVKRSKNKWECKFNAG 168

Query: 442 IMHINNKDILFNK 455
           +M IN K++LF++
Sbjct: 169 VMQINGKNVLFSQ 179

HSP 2 Score: 58.9 bits (141), Expect = 1.3e-08
Identity = 33/63 (52.38%), Postives = 43/63 (68.25%), Query Frame = 0


Query: 3  TSTSSIYINVIEDVINKLRDEFVDNGP-GEDVLKELQGMWEAKMMQARAVTGPIERSAPS 62
          + TSS Y  VI+DVINK R + V NG   E VL ++Q MW+ KM+QA A++G IE S+ S
Sbjct: 6  SDTSSSYNYVIDDVINKSRCDLVYNGELDESVLSQIQSMWKTKMIQAGAMSGTIETSSAS 65

Query: 63 KPT 65
           PT
Sbjct: 66 IPT 68

The following BLAST results are available for this feature:

BLAST of CmUC02G045480.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0061868.1	2.6e-208	82.29	transcription initiation factor IIA subunit 1 [Cucumis melo var. makuwa] >TYK153...	[more]
XP_038901376.1	2.8e-207	83.70	transcription initiation factor IIA subunit 1-like [Benincasa hispida]	[more]
XP_008464085.1	2.9e-204	82.60	PREDICTED: transcription initiation factor IIA subunit 1 [Cucumis melo]	[more]
XP_004143132.2	1.6e-202	82.20	LOW QUALITY PROTEIN: transcription initiation factor IIA large subunit [Cucumis ...	[more]
XP_031745118.1	1.6e-202	82.20	LOW QUALITY PROTEIN: transcription initiation factor IIA subunit 1-like [Cucumis...	[more]

BLAST of CmUC02G045480.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54G80	4.8e-08	31.19	Transcription initiation factor IIA subunit 1 OS=Dictyostelium discoideum OX=446...	[more]
O08949	2.0e-06	24.42	Transcription initiation factor IIA subunit 1 OS=Rattus norvegicus OX=10116 GN=G...	[more]
P52655	5.9e-06	24.84	Transcription initiation factor IIA subunit 1 OS=Homo sapiens OX=9606 GN=GTF2A1 ...	[more]
Q5RCU0	1.7e-05	24.84	Transcription initiation factor IIA subunit 1 OS=Pongo abelii OX=9601 GN=GTF2A1 ...	[more]
P52654	3.8e-05	24.00	Transcription initiation factor IIA subunit 1 OS=Drosophila melanogaster OX=7227...	[more]

BLAST of CmUC02G045480.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CVW1	1.2e-208	82.29	Transcription initiation factor IIA subunit 1 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3CM61	1.4e-204	82.60	transcription initiation factor IIA subunit 1 OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
A0A0A0KE66	4.1e-204	82.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188660 PE=3 SV=1	[more]
A0A6J1J8T3	1.3e-197	80.40	transcription initiation factor IIA subunit 1-like isoform X1 OS=Cucurbita maxim...	[more]
A0A6J1FUX4	1.3e-197	80.40	transcription initiation factor IIA subunit 1-like isoform X1 OS=Cucurbita mosch...	[more]

BLAST of CmUC02G045480.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07480.1	2.4e-116	53.41	Transcription factor IIA, alpha/beta subunit	[more]
AT1G07480.2	2.4e-116	53.41	Transcription factor IIA, alpha/beta subunit	[more]
AT1G07470.1	3.2e-116	53.41	Transcription factor IIA, alpha/beta subunit	[more]
AT5G59230.1	4.4e-09	43.84	transcription factor-related	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004855	Transcription factor IIA, alpha/beta subunit	SMART	SM01371	TFIIA_2	coord: 7..457 e-value: 1.7E-85 score: 300.0
IPR004855	Transcription factor IIA, alpha/beta subunit	PFAM	PF03153	TFIIA	coord: 8..454 e-value: 1.8E-45 score: 156.7
IPR004855	Transcription factor IIA, alpha/beta subunit	PANTHER	PTHR12694	TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 1	coord: 2..231
IPR004855	Transcription factor IIA, alpha/beta subunit	PANTHER	PTHR12694	TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 1	coord: 326..455
None	No IPR available	GENE3D	1.10.287.100		coord: 1..53 e-value: 4.6E-20 score: 72.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 383..409
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 366..409
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 252..323
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 254..300
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..152
None	No IPR available	PANTHER	PTHR12694:SF16	BNAC08G45360D PROTEIN	coord: 326..455 coord: 2..231
None	No IPR available	CDD	cd07976	TFIIA_alpha_beta_like	coord: 416..456 e-value: 1.25121E-22 score: 90.2763
None	No IPR available	CDD	cd07976	TFIIA_alpha_beta_like	coord: 5..62 e-value: 1.40983E-16 score: 73.3275
None	No IPR available	SUPERFAMILY	47396	Transcription factor IIA (TFIIA), alpha-helical domain	coord: 4..46
IPR009088	Transcription factor IIA, beta-barrel	GENE3D	2.30.18.10		coord: 388..458 e-value: 8.9E-21 score: 75.1
IPR009088	Transcription factor IIA, beta-barrel	SUPERFAMILY	50784	Transcription factor IIA (TFIIA), beta-barrel domain	coord: 404..456

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmUC02G045480	CmUC02G045480	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC02G045480.1-exon	CmUC02G045480.1-exon-CmU531Chr02:33363265..33363594	exon
CmUC02G045480.1-exon	CmUC02G045480.1-exon-CmU531Chr02:33363833..33364003	exon
CmUC02G045480.1-exon	CmUC02G045480.1-exon-CmU531Chr02:33364084..33364269	exon
CmUC02G045480.1-exon	CmUC02G045480.1-exon-CmU531Chr02:33364547..33364595	exon
CmUC02G045480.1-exon	CmUC02G045480.1-exon-CmU531Chr02:33364672..33364736	exon
CmUC02G045480.1-exon	CmUC02G045480.1-exon-CmU531Chr02:33364926..33365051	exon
CmUC02G045480.1-exon	CmUC02G045480.1-exon-CmU531Chr02:33366766..33366821	exon
CmUC02G045480.1-exon	CmUC02G045480.1-exon-CmU531Chr02:33367328..33367364	exon
CmUC02G045480.1-exon	CmUC02G045480.1-exon-CmU531Chr02:33367452..33367538	exon
CmUC02G045480.1-exon	CmUC02G045480.1-exon-CmU531Chr02:33367857..33368009	exon
CmUC02G045480.1-exon	CmUC02G045480.1-exon-CmU531Chr02:33369131..33369194	exon
CmUC02G045480.1-exon	CmUC02G045480.1-exon-CmU531Chr02:33369677..33369843	exon
CmUC02G045480.1-exon	CmUC02G045480.1-exon-CmU531Chr02:33369952..33370061	exon
CmUC02G045480.1-exon	CmUC02G045480.1-exon-CmU531Chr02:33370119..33370455	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC02G045480.1-five_prime_utr	CmUC02G045480.1-five_prime_utr-CmU531Chr02:33363265..33363477	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC02G045480.1-cds	CmUC02G045480.1-cds-CmU531Chr02:33363478..33363594	CDS
CmUC02G045480.1-cds	CmUC02G045480.1-cds-CmU531Chr02:33363833..33364003	CDS
CmUC02G045480.1-cds	CmUC02G045480.1-cds-CmU531Chr02:33364084..33364269	CDS
CmUC02G045480.1-cds	CmUC02G045480.1-cds-CmU531Chr02:33364547..33364595	CDS
CmUC02G045480.1-cds	CmUC02G045480.1-cds-CmU531Chr02:33364672..33364736	CDS
CmUC02G045480.1-cds	CmUC02G045480.1-cds-CmU531Chr02:33364926..33365051	CDS
CmUC02G045480.1-cds	CmUC02G045480.1-cds-CmU531Chr02:33366766..33366821	CDS
CmUC02G045480.1-cds	CmUC02G045480.1-cds-CmU531Chr02:33367328..33367364	CDS
CmUC02G045480.1-cds	CmUC02G045480.1-cds-CmU531Chr02:33367452..33367538	CDS
CmUC02G045480.1-cds	CmUC02G045480.1-cds-CmU531Chr02:33367857..33368009	CDS
CmUC02G045480.1-cds	CmUC02G045480.1-cds-CmU531Chr02:33369131..33369194	CDS
CmUC02G045480.1-cds	CmUC02G045480.1-cds-CmU531Chr02:33369677..33369843	CDS
CmUC02G045480.1-cds	CmUC02G045480.1-cds-CmU531Chr02:33369952..33370061	CDS
CmUC02G045480.1-cds	CmUC02G045480.1-cds-CmU531Chr02:33370119..33370197	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC02G045480.1-three_prime_utr	CmUC02G045480.1-three_prime_utr-CmU531Chr02:33370198..33370455	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmUC02G045480.1	CmUC02G045480.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006367	transcription initiation from RNA polymerase II promoter
biological_process	GO:0006413	translational initiation
cellular_component	GO:0005672	transcription factor TFIIA complex
molecular_function	GO:0003743	translation initiation factor activity