CmUC02G036630.1 (mRNA) Watermelon (USVL531) v1

Overview


Name	CmUC02G036630.1
Type	mRNA
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Unknown protein
Location	CmU531Chr02: 22344782 .. 22346222 (-)
Sequence length	843
RNA-Seq Expression	CmUC02G036630.1
Synteny	CmUC02G036630.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATATCTGGGGATCATGGAAACCTATGGCTGATATACAGCTTGCATCCACAAAGCCAGACAGCGTGGGGTTTGTAGTTAAGACAATGATGAACTTGGTTCCACCGAAATCTATATGTCATATGAAATTGTGGTCCAAATTATTATCTTCTTAACTTGTTTCTTTGCAAGTCGGCTAAGGATTCTTCACCACTTTGCACTTTGGAACTTACATTATTGAAATTTAGGTAACCCTGAATCAATATTTTCAACTTCTTTATATGCCATAGATTGCTGGAGAGAGATTTTGAATGTAAGTTGTAAGTACTCAACCTTCTGACGTTTGACTGCAAATCAATATTTGTAGTATAAGGTTATATTATAAGTTTAGTTATTAAACGGAAACATTGACAAATATAGTTTTATGGTTATTGACACTTTCTAATGTGAGGTTTGTATTTTCAAACTGAGTTGGAAGGCTGTTCGGCCTAAAGAATTTTGTAGGGCTCATGACTTAAAAAACATCAGTTTTAGAAATTTCTAGTCTATTAGCTTATTCGCAACTAATATTTTGTAAATTTCATAAGATTTAGAAAATTTTCATGTCTAGAGTTCAACTACATCTTGTAACATTTTTAATCTTTTGATCTCCTCTCATCAATCAATTTAGTAGTGATGTATGTATGTGTGCATATATTTTCGGATTCCTTCTCTCTCATCAATCATTATTTGTGTTAAATCATTTAATGCTATCGATTTTGTTTTCTATTTTATTTGGCATAATTCTTAGAAATAATGAACAAAAATTATTTTTTATTTTATTCTTGTTGTAACTTCTCTCATTTTGAACTTTAGAATATAGTGCCTCCAGTTCATGATTTCTTCATCTTCTCCTTCATTTTGTTTTCTTTCATTTCAATGTCTTAACTCCTCTCTCATCCATGTATATTTACATCTTTTCAGTATATTGCCTATATATTCGACATATAACTTTTGGTGTATGCAATGTAGATACTTTATTTTCTCGTTAAAGCTTCTTGCTAATTTGTGGTTCCATTTATCGTGGGATTGGTTTTCAAATTTTTAGGAAAACTTGATTTACTTGTTAGGTTTTGAAAATAAAACTGTTTTGAGAAGTCCATATATAGATATGAAGCAACTTCCCTAACATGTGTCTTTTGATATTATTATTATTATTATATATTAGAAAAAAAACATACAGAGGGCTGGAAAAGTAAATTGGGCCAAATTTCCCAATTAGGTAAAGGTGTAATTGAGCCTATTTTGTTTAGGCTATTTGTGTAGAAAGTCTTCAATTTTATGTCTTATTATCTCTTTATATTGAGTGTTCTTTGAATTCACAATTTCTTAGGCTTCACAATTCTACTCCTTACATTAAATGCAGGACCAATATTTCAAAGTGGACTTCCAACTGTATATGTTCATAAGGAAGTAGCATGA

mRNA sequence

ATGAATATCTGGGGATCATGGAAACCTATGGCTGATATACAGCTTGCATCCACAAAGCCAGACAGCGTGGGGTTTGTAGTTAAGACAATGATGAACTTGGTTCCACCGAAATCTATATGTAACCCTGAATCAATATTTTCAACTTCTTTATATGCCATAGATTGCTGGAGAGAGATTTTGAATGTAAGTTTTTTATGGTTATTGACACTTTCTAATGTGAGAGTTCAACTACATCTTAATATAGTGCCTCCAGTTCATGATTTCTTCATCTTCTCCTTCATTTTGTTTTCTTTCATTTCAATGTCTTAACTCCTCTCTCATCCATGTATATTTACATCTTTTCAGTATATTGCCTATATATTCGACATATAACTTTTGGTGTATGCAATGTAGATACTTTATTTTCTCGTTAAAGCTTCTTGCTAATTTGTGGTTCCATTTATCGTGGGATTGGTTTTCAAATTTTTAGGAAAACTTGATTTACTTGTTAGGTTTTGAAAATAAAACTGTTTTGAGAAGTCCATATATAGATATGAAGCAACTTCCCTAACATGTGTCTTTTGATATTATTATTATTATTATATATTAGAAAAAAAACATACAGAGGGCTGGAAAAGTAAATTGGGCCAAATTTCCCAATTAGGTAAAGGTGTAATTGAGCCTATTTTGTTTAGGCTATTTGTGTAGAAAGTCTTCAATTTTATGTCTTATTATCTCTTTATATTGAGTGTTCTTTGAATTCACAATTTCTTAGGCTTCACAATTCTACTCCTTACATTAAATGCAGGACCAATATTTCAAAGTGGACTTCCAACTGTATATGTTCATAAGGAAGTAGCATGA

Coding sequence (CDS)

ATGAATATCTGGGGATCATGGAAACCTATGGCTGATATACAGCTTGCATCCACAAAGCCAGACAGCGTGGGGTTTGTAGTTAAGACAATGATGAACTTGGTTCCACCGAAATCTATATGTAACCCTGAATCAATATTTTCAACTTCTTTATATGCCATAGATTGCTGGAGAGAGATTTTGAATGTAAGTTTTTTATGGTTATTGACACTTTCTAATGTGAGAGTTCAACTACATCTTAATATAGTGCCTCCAGTTCATGATTTCTTCATCTTCTCCTTCATTTTGTTTTCTTTCATTTCAATGTCTTAA

Protein sequence

MNIWGSWKPMADIQLASTKPDSVGFVVKTMMNLVPPKSICNPESIFSTSLYAIDCWREILNVSFLWLLTLSNVRVQLHLNIVPPVHDFFIFSFILFSFISMS

Homology

The following BLAST results are available for this feature:

BLAST of CmUC02G036630.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmUC02G036630.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmUC02G036630.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmUC02G036630.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmUC02G036630	CmUC02G036630	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC02G036630.1-exon	CmUC02G036630.1-exon-CmU531Chr02:22344782..22345387	exon
CmUC02G036630.1-exon	CmUC02G036630.1-exon-CmU531Chr02:22345617..22345632	exon
CmUC02G036630.1-exon	CmUC02G036630.1-exon-CmU531Chr02:22345792..22345822	exon
CmUC02G036630.1-exon	CmUC02G036630.1-exon-CmU531Chr02:22345923..22345994	exon
CmUC02G036630.1-exon	CmUC02G036630.1-exon-CmU531Chr02:22346105..22346222	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC02G036630.1-three_prime_utr	CmUC02G036630.1-three_prime_utr-CmU531Chr02:22344782..22345315	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC02G036630.1-cds	CmUC02G036630.1-cds-CmU531Chr02:22345316..22345387	CDS
CmUC02G036630.1-cds	CmUC02G036630.1-cds-CmU531Chr02:22345617..22345632	CDS
CmUC02G036630.1-cds	CmUC02G036630.1-cds-CmU531Chr02:22345792..22345822	CDS
CmUC02G036630.1-cds	CmUC02G036630.1-cds-CmU531Chr02:22345923..22345994	CDS
CmUC02G036630.1-cds	CmUC02G036630.1-cds-CmU531Chr02:22346105..22346222	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmUC02G036630.1	CmUC02G036630.1-protein	polypeptide