CmUC02G028180.1 (mRNA) Watermelon (USVL531) v1

Overview
NameCmUC02G028180.1
TypemRNA
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr02: 2270295 .. 2272400 (+)
Sequence length342
RNA-Seq ExpressionCmUC02G028180.1
SyntenyCmUC02G028180.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAACAGAAAGAAGCCCGAGGCCGAGCGCTTCCCTCTTGAGTTAGGGGTGGCGTGGTATTCCACAGGGAGAGGTTTTTCAAATTGTGGCGCACTCTCAGTGCGTTGGGCTTACATTATCACTTTCTGAATAGGGCTTCCATGGCCGCTTTGCTGCCCTAGCTTTGCAGTCAAAGCGAGGGGTTTCGCCCTACATTAAAATAAAAAAATGGATAACAGTTCTCCAACTAGTTCATCACAAATGCTCATGTCAAACCAATGCCAATATTTGGGCTAAATGTATTTCCCTGCTGCTTTTGTAATCTAAATGCTCTTTTGGCTTGATAGAACAAATGTCCTATCCGGCCCCTTCTTCTTCGCTTTTTCCACATCAATGGATTGTGAATGTGAGTTCATCTTCCTAAGATAAAAGATTAAATGCTGAAGAAGTAACAAATCACTTCTCTCCCACTGTAACTTGTGATTTAGTTCTTTATAAGTGATGCTTGTATATTACAAAACACAACTATTTCTTCCACATAATTGATATAAACGTGAGATACTAATTGTGATGTTTAATCAGTGTTCAATGATGATGTGTGATGATGAATGGTCAAGGGGCGGAAAGTTTTGTGTGCAGAGTTCTACATTGTGACAGTGGCCGCTGCTAAATTTCGCGAGCTGATCCGCTGGAATTTGGTTTTCCATGTGTTGGCTTTCAGTCTAGTTTGCATGTCTTAGTTTCTGAATTTGTGTAACCGTGGACTACTAGAATGTATAGGGAGAGATCTACGGTAGACAGACATCTGAATTTTATTTGAATAGGAAGGCCTCAAGAAACTGAGCTCATGGAGTCTCATTATATTGAATTCCTTATAGAATTGTCTTGCAATAAGAGGAAGGATTCTTTCTCTAGCAGTCTTTATAACTCAATCATTACTCAGGCTATGATCATACTTCATAGTTCTGATGCATGCTTGTGTTTTATGACTCCGACATTTGTTAGATTATTGACTGTATAAACTCGATTACACTACAAAGCCGTGTTCGGTGAACTCTAGGTAAATTTTTTTGTGTCTATTAATAGATGTATTGTGCAATGTTAACGCCATTTAATATTTATTTGGCAGTGACTGGCTTGCAAACTTCATGATATATTGGAAAAGGTTTTGACCACCCGGGCATTCACCTCGGCAAGCATATGGTTGATTTTCACCCAAGAAACATAACAACGTTTTTGTTTCCCTTCATATGTTCTAACTTATTCACTGTTAATGACGAAATACTCGGATTGCCTTGTTCTAATTTATAATGCTTATGGTATGTTTTATTTAGGTTAAAATATTGATCAATGTTAGGTGAAAATTACCTTTTTAGTCTCTGAGTTTTTAGTATTAGGTGCATTTGGTTCTTAAATTTTTAAAAGACCTTTTTTGTCCCTCAATTTTTCAAAATAGGTTTAAATGGTCCCTCATTATTAACGGAAAGATGATTGTGACTTATCTATGTGATTCGCTACGCTTGTTTGGGCCTATCGGCGGTGCTAGTACAATAAGGTAATCCAGTAGCATATGAGAGCCGAAAGCTTCATGAGACTGAAAGGCGTGGTCCAAGAGAAGGAGATGACAGCAATAGTGCACTACTTGAGCACGTGGAGGCGGGTCACGATTTCTGGTCAAGACGAATAATGTGGCGACGAGTGACTTCCTGACCCAGAAGATACTCACACCAAAATGGGGACGATGGCAAGCTTGGACTTTTTAATTGCATATGTGGCTTGATGATTATACTAAAGAGGCTGCTGACTAGACTTTTATGTAATTTAATTTTAAAAATCACAATTAAGCCCTAATGCAAATCACACAAAATCGTACAGCAAAATCTAATCGCAAAACCTTTGTTCTTAGCTCACAAATCACACAAAATCTCAAAAACCAACCCACTTTATCTTCTAGCCGGCGAGTAATCTTCTGAAGAAGGTGAATGATTGATTTTAAATTTAATGTACTCTATTAACTTAGGAAGAGAAAATCATCCACGTTTCTTCCTTCTCCAGGGAAGTGCTATCCCAGTAGAAATCTTCCACTTTGGGTTCACTGGAAGCTACTTTCCAAGGAATGTTTAA

mRNA sequence

ATGGATAACAGAAAGAAGCCCGAGGCCGAGCGCTTCCCTCTTGAGTTAGGGGTGGCGTGGTATTCCACAGGGAGAGGTTTTTCAAATTGTGGCGCACTCTCAGTGCAACAAATGTCCTATCCGGCCCCTTCTTCTTCGCTTTTTCCACATCAATGGATTGTGAATTTTCTGAATTTGTGTAACCGTGGACTACTAGAATGTATAGGGAGAGATCTACGCTCACAAATCACACAAAATCTCAAAAACCAACCCACTTTATCTTCTAGCCGGCGAGGAAGTGCTATCCCAGTAGAAATCTTCCACTTTGGGTTCACTGGAAGCTACTTTCCAAGGAATGTTTAA

Coding sequence (CDS)

ATGGATAACAGAAAGAAGCCCGAGGCCGAGCGCTTCCCTCTTGAGTTAGGGGTGGCGTGGTATTCCACAGGGAGAGGTTTTTCAAATTGTGGCGCACTCTCAGTGCAACAAATGTCCTATCCGGCCCCTTCTTCTTCGCTTTTTCCACATCAATGGATTGTGAATTTTCTGAATTTGTGTAACCGTGGACTACTAGAATGTATAGGGAGAGATCTACGCTCACAAATCACACAAAATCTCAAAAACCAACCCACTTTATCTTCTAGCCGGCGAGGAAGTGCTATCCCAGTAGAAATCTTCCACTTTGGGTTCACTGGAAGCTACTTTCCAAGGAATGTTTAA

Protein sequence

MDNRKKPEAERFPLELGVAWYSTGRGFSNCGALSVQQMSYPAPSSSLFPHQWIVNFLNLCNRGLLECIGRDLRSQITQNLKNQPTLSSSRRGSAIPVEIFHFGFTGSYFPRNV
Homology
The following BLAST results are available for this feature:
BLAST of CmUC02G028180.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmUC02G028180.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmUC02G028180.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmUC02G028180.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmUC02G028180CmUC02G028180gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmUC02G028180.1-exonCmUC02G028180.1-exon-CmU531Chr02:2270295..2270400exon
CmUC02G028180.1-exonCmUC02G028180.1-exon-CmU531Chr02:2270624..2270682exon
CmUC02G028180.1-exonCmUC02G028180.1-exon-CmU531Chr02:2271017..2271069exon
CmUC02G028180.1-exonCmUC02G028180.1-exon-CmU531Chr02:2272183..2272237exon
CmUC02G028180.1-exonCmUC02G028180.1-exon-CmU531Chr02:2272332..2272400exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmUC02G028180.1-cdsCmUC02G028180.1-cds-CmU531Chr02:2270295..2270400CDS
CmUC02G028180.1-cdsCmUC02G028180.1-cds-CmU531Chr02:2270624..2270682CDS
CmUC02G028180.1-cdsCmUC02G028180.1-cds-CmU531Chr02:2271017..2271069CDS
CmUC02G028180.1-cdsCmUC02G028180.1-cds-CmU531Chr02:2272183..2272237CDS
CmUC02G028180.1-cdsCmUC02G028180.1-cds-CmU531Chr02:2272332..2272400CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmUC02G028180.1CmUC02G028180.1-proteinpolypeptide