CmUC02G027180.1 (mRNA) Watermelon (USVL531) v1

Overview
NameCmUC02G027180.1
TypemRNA
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr02: 1405251 .. 1408329 (-)
Sequence length264
RNA-Seq ExpressionCmUC02G027180.1
SyntenyCmUC02G027180.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCACATCTAACTCATTAAAGCGTGCCCAACATAATTGGAAGAACAACCTGCAAAAAGTTTTGGTATTTGTTAGTGATGCAAATAAATATTAAAAAGATAAAGTACAACAAGTAAATTTAAACCGAGTTGAACCGAATGGTTTGGTTTGATTTTTATCTGAAGTTTAAAATTTGAGAAAATCGAACCAAACCAATGGATATATATCATTTAAAAAGATTCTAGAACCACTTAATTCCCTCATCGCCTTAATAGCATTGTCAACCATCGTCTCCTTATAGCAGTCATGCCTAGCACCAACGAAAGTCTTCTTCTTCTCTTCTCTTTTTGATTTGATTCTTCTCAAATTCAAATGGTTCCTCAACCTCTTTGCCTCATTATCTCAGTCCCATCAACCATCAACACATATGTCTTATTGGATATTGGTAATTCAGTTCTTCTGTAAAACACTAACTGGATTGGGCCTAAAACCCAAAAATCATCTTGAGTTCTTGTCTAATCATAAGAAACCTCATAATTATAATTGAAATCTCAATATCAACCTCGACACTGATATTTTAATTAATCATACTAAATTAAGATTAATTGAAAGTACAAAATCAAAATTAGACATTTCAAAATAGCATTTTAATCTTGTCCTAAATTAATTAATTAAAAGTTAACATCAAAATGGAGTAAACATGTAAAATATTAAAGCTAGGGATTTTAAAAAGATCTTATAAATCCAATCAACTCAACCTAGCCATATAATTTGAGTTGAATTGAGTTTAAATAAATGAATTTTTTATGAGTTGGATTGCTTTATTGGTTCACTTATTATTTGTTTTAAGAAGTATGTTTATTTAAGTATGAAACAATTATATATACACATGTTTATTTTAATTTTGTTTAGCTTCATAATTTTTTTTAATAGTTTATTCTTCAAATCACTCTAAACATAATTTTTTTACCACTTTTCGAAATAAAATTTTTATAATATAAATTGAAATTGAGTTGTTAATCTTAATTCTTAATTCAATATATATATCATATTATTAAATAAAATTTTATACATTAACATTTTACTTATTTTTAGAATAAAAATTTTAATAAATGACGTGATTAACACAACCCAACATGAATTGAGTTCGAATTAAAAAACATAACCCAAATAATTGGTTTAGGTCTTAAAAAAGAAAAAAAAAAAAAAAAAGTGCTTCAACCTAGTTCAATTTAACTCAACCCAAAAACCCACTCATTAGAACTGTTAACAAACCATAGGCCACAGACACAAGGAGTTCCATATTTATACAAATATAGGGAAATAATATAAGAGTTTTTTTTTTTTACAAAAGTATTTAGAGATAAGGACAAAAAAAAAAACGTGGAATTGAGCTCTATTTTAAAATTCCGCGGTTTTTCCCATAATCCGGGGGGGAGAAATAGAAAGGCTGTATAATTTCCAAATTCCAACTTAATCGGATATATCCCAATAATTTTAGTTCGTCAAAACCCAATCCTACCCCTCCAATTCTTATCCCGAAAAGCAGTTTCAAGGGCTAATTAAGTCCACTTACTACAAAAACCAAAACACCATTACGCCAGAAACCATGCGGGGTTTATTTCTCAGGCTAAGAAGTTTTCCTCCGCTGTGCCGTCCGCCAACCACGTACAAGAGTCGGAGGAATCTCTGAGGAGGTTCATGTACCTTAGTTGTTGGGGTCCTAATAACTGAACTGAACGCACCGTCCCGACCGCCTGGACCGGCCGCGGTTCAGCTTAAGGGTCGTGATTGTAATTAATGGGAGATGGGCGGCGGTCTGATTTTTTTTTGAAGGATTTGTAAAAGAAATTCCCTTTTTTATTATTTAATAAATTGAAATTGATGGCTTTTTCAGTGCTTTAATTTCTGTTGCACATTGATGATTTTGTTGAGTAAGAGGGGGTGAAATTTTCAATTTTTACTTTTAGGAGGGATCAATTTGATCATAAACTTCCAATTTCATTAAATTATACTCCCAACTTTAAGGGATTGTTCAGGACGCCGAAATATAATTAAGATTACTGAGAATCAAAGAAGTGTTGGAATGCATGAGGTGTCGAGGGTGGAACGGAAATGAGATCGTAAAATGAAAAAACGATGGGAACGAGGTTTGGTTAAAAACTGTCGGAATGAAATGAGTTTAATATTATAAATCGAACCAAAAGCTCAATTCAAACATGATTTTCAATTATATTACAATCTAAAAATCATTATATTTACGGCCCCCAAACAGCTTCTAAGGATTGCAATTTTAATCCCGTTCAATTTCTCTTAATTTGTTCACTAGTTTTAATTAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAAAAAAATAGAAAGCTTCGTAAACTTATTTAATTGAAACTTATTAATTTCAATTAAATAAAATTGTGATAAAAATAGGTTGGATCAATTTACAAATTAACCCTTGGAAAAATCCATATATATCCATTTAAAGAAACCATTCTAATCTCGCTATCTAACAAAACACTTATTTAAATTTAAAGTTAAATTGGATATCATTAGCAATTAAGTTTTTTTTAATTATTTTTAAATATAGCAAAATGTATTACTATTTATAAATATAAAAAAATTGCACTATTTATCATAATCAGAAAGATTACGTTACCTATCGTTCAAATCTTCCAAATATAAGGACAATCAAATAATAAACAACAAATACAACAGCTGCTAATAGGATCACAAATTTGAACAGTAAGCCACGTCATAAAAGGAAAAATTTTTAAATCCTATGTCTTAGTTAACTTGCGCTGTTTTGTGGGAGAAATACCAATATTGTATAAGACACGTGGAAATGGAAATGGTAAACCGTGTGCAACAAATTTCAGAATTTTACTCCAAAACCCAATCCTACCCCCTTCACTTCCATCTCCAAAAGGCAGATTCAAGGGACAATTAAGTCTATTCACAAGAAAAAGTATGGGTCCCATCCAAAACCAAACACAAAAACCACGGGCTCCTCTCCTTCCGGCAGCCTCTGTATAAAAACCTCACTCCACCTTCAAATTTCACCAACAAAAATTTGA

mRNA sequence

ATGCCCACATCTAACTCATTAAAGCGTGCCCAACATAATTGGAAGAACAACCTGCAAAAAGTTTTGAATTTTACTCCAAAACCCAATCCTACCCCCTTCACTTCCATCTCCAAAAGGCAGATTCAAGGGACAATTAAGTCTATTCACAAGAAAAAGTATGGGTCCCATCCAAAACCAAACACAAAAACCACGGGCTCCTCTCCTTCCGGCAGCCTCTGTATAAAAACCTCACTCCACCTTCAAATTTCACCAACAAAAATTTGA

Coding sequence (CDS)

ATGCCCACATCTAACTCATTAAAGCGTGCCCAACATAATTGGAAGAACAACCTGCAAAAAGTTTTGAATTTTACTCCAAAACCCAATCCTACCCCCTTCACTTCCATCTCCAAAAGGCAGATTCAAGGGACAATTAAGTCTATTCACAAGAAAAAGTATGGGTCCCATCCAAAACCAAACACAAAAACCACGGGCTCCTCTCCTTCCGGCAGCCTCTGTATAAAAACCTCACTCCACCTTCAAATTTCACCAACAAAAATTTGA

Protein sequence

MPTSNSLKRAQHNWKNNLQKVLNFTPKPNPTPFTSISKRQIQGTIKSIHKKKYGSHPKPNTKTTGSSPSGSLCIKTSLHLQISPTKI
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..72

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmUC02G027180CmUC02G027180gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmUC02G027180.1-exonCmUC02G027180.1-exon-CmU531Chr02:1405251..1405448exon
CmUC02G027180.1-exonCmUC02G027180.1-exon-CmU531Chr02:1408264..1408329exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmUC02G027180.1-cdsCmUC02G027180.1-cds-CmU531Chr02:1405251..1405448CDS
CmUC02G027180.1-cdsCmUC02G027180.1-cds-CmU531Chr02:1408264..1408329CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmUC02G027180.1CmUC02G027180.1-proteinpolypeptide