Clc10G00920.1 (mRNA) Watermelon (cordophanus) v2

Overview
NameClc10G00920.1
TypemRNA
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
LocationClcChr10: 849331 .. 850063 (+)
Sequence length369
RNA-Seq ExpressionClc10G00920.1
SyntenyClc10G00920.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGTTAGTTTGGAGTTCTCAGTTGGAGGTTGTCTCCTTCCCTCATATTCGTCATTATCGTGCACTAAAAACTCTGGAGGAACAAGAAGATTCCGATTTCCTTTCTCCGCACCCTGAGTGATTTTCTATTCTAGTAGCTCGACATATTATTTTGTAGCAATATTGTGTGGTCTGTTTTGGATATTTACCTTCTAAAAAAACAAGATAAAAAAGTCTAGTGGGATTTTCTATAATTTAGTGATTAAAAAAAAAGAAAACAACTTGGATGCATAAAAATTCTGATATATTTTCTCGCCGTTCCGGCTAATTGGAGCGGACCACGGCGAGACGAACAAGAAGTAACGCCAAAGATGGTTGTTCGTCATTTTCATTAACGTCTCCCCCAAGCTTTCCCTCTGCAGAAACGTGGTCAGGGTTGTTGAGAACAGAAATGTGTTGTGTTTTGGGCTTTGGCCATCGTCGTGCCTGAACGAGAGGATCAACGCCGTCGCCGCTACTCGCTTTCTTGGGTTTCCATTGCCGCCGTCTGGTAATCAGAAGTTGTCGCCGTCTTCGTGGCCAAGGTTTCATTACTGTGCGCTGAGCGGTGCGAGGGAGGAGAAAGAAATGGAAATTAGGGGTTTCTTCAAAAGGGGCAAAAGGGTAATTTCCGACCTTCAGAAGTCTTATTACAGTATTACTCAACAAAACGTAATTTCACCTCTTTTTCTTTCGACTTTCAGTTTTGTTGA

mRNA sequence

ATGAGGTTAGTTTGGAGTTCTCAGTTGGAGGTTGTCTCCTTCCCTCATATTCGTCATTATCGTGCACTAAAAACTCTGGAGGAACAAGAAGATTCCGATTTCCTTTCTCCGCACCCTGAAAACGTGGTCAGGGTTGTTGAGAACAGAAATGTGTTGTGTTTTGGGCTTTGGCCATCGTCGTGCCTGAACGAGAGGATCAACGCCGTCGCCGCTACTCGCTTTCTTGGGTTTCCATTGCCGCCGTCTGGTAATCAGAAGTTGTCGCCGTCTTCGTGGCCAAGGTTTCATTACTGTGCGCTGAGCGGTGCGAGGGAGGAGAAAGAAATGGAAATTAGGGGTTTCTTCAAAAGGGGCAAAAGGTTTTGTTGA

Coding sequence (CDS)

ATGAGGTTAGTTTGGAGTTCTCAGTTGGAGGTTGTCTCCTTCCCTCATATTCGTCATTATCGTGCACTAAAAACTCTGGAGGAACAAGAAGATTCCGATTTCCTTTCTCCGCACCCTGAAAACGTGGTCAGGGTTGTTGAGAACAGAAATGTGTTGTGTTTTGGGCTTTGGCCATCGTCGTGCCTGAACGAGAGGATCAACGCCGTCGCCGCTACTCGCTTTCTTGGGTTTCCATTGCCGCCGTCTGGTAATCAGAAGTTGTCGCCGTCTTCGTGGCCAAGGTTTCATTACTGTGCGCTGAGCGGTGCGAGGGAGGAGAAAGAAATGGAAATTAGGGGTTTCTTCAAAAGGGGCAAAAGGTTTTGTTGA

Protein sequence

MRLVWSSQLEVVSFPHIRHYRALKTLEEQEDSDFLSPHPENVVRVVENRNVLCFGLWPSSCLNERINAVAATRFLGFPLPPSGNQKLSPSSWPRFHYCALSGAREEKEMEIRGFFKRGKRFC
Homology
The following BLAST results are available for this feature:
BLAST of Clc10G00920.1 vs.
Match NameE-valueIdentityDescription
BLAST of Clc10G00920.1 vs.
Match NameE-valueIdentityDescription
BLAST of Clc10G00920.1 vs.
Match NameE-valueIdentityDescription
BLAST of Clc10G00920.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Clc10G00920Clc10G00920gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Clc10G00920.1-exonClc10G00920.1-exon-ClcChr10:849331..849449exon
Clc10G00920.1-exonClc10G00920.1-exon-ClcChr10:849734..849974exon
Clc10G00920.1-exonClc10G00920.1-exon-ClcChr10:850055..850063exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Clc10G00920.1-cdsClc10G00920.1-cds-ClcChr10:849331..849449CDS
Clc10G00920.1-cdsClc10G00920.1-cds-ClcChr10:849734..849974CDS
Clc10G00920.1-cdsClc10G00920.1-cds-ClcChr10:850055..850063CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Clc10G00920.1Clc10G00920.1-proteinpolypeptide