Clc09G12185.1 (mRNA) Watermelon (cordophanus) v2

Overview
NameClc09G12185.1
TypemRNA
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionGlycosyltransferase
LocationClcChr09: 10888258 .. 10891335 (+)
Sequence length252
RNA-Seq ExpressionClc09G12185.1
SyntenyClc09G12185.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGTTTAATATGTGTAGGAAATGTCTGAAATCGGATAAAAAAAGAATTTGGTATGCATTTTTTGCTAGCTGTCATTTTTTCCGTAAGTTCATTTTTCTCGTAATTTGAATGAGTTTACAAGAAAAGTGACAGAATGTCCAAATCTCATGAGTACATGCCAACTTTCGGGACATTTGGGCATTATGTGACTTTTCCCGTAAGGTTTCCAACAAAACCTTACCAGAAAAGTCACAGAATGGTCAAATTTCCTGAAAGGTTTGAACCTACCAAGAAATTTGGGTTTTCTTTGACTTTTCCCGTAAGCCTTCGAGCATGAACTTATGGGAAAAGTCACAAAATGCCCAAATGTCTTGGTAGGTTCAAAACCTTTGGGAAATTTGGGCATTCTATGACTTTTCTGTAAACTTTCAAGTATGACCTTACGGAAAAAGTCACACAATGCCCAAAATTCTTGGTAGGTTCAAAACTTTTGGGAAATTTGGGCATTCTGTGACTTTTCCCGTAAGCTTTCGAGCATGGCCTTACGGGAAAAGTCATGGACTGCCCAAAATTTCTAATGCCATAAACACATACCTGAAATATTTTTCATCATCAAGCTTCAAAGCATATAAGGTTTCGAGGTTCATTATCTTCAGGGTTTCACCATATGCATGTAAGTGGCCGAAGGACTCCTCGAGCCTACCTCGAACCATTATTAAGGTCTCTTCCTTCCACCGCTAGGTTTTTTTGTAACTAATGCTCACACCATACTCTTCACAAATGTATTGCATTATATCTTTCGGCCTATACACCCTACTAACATTCGTGTACTTGGACTTAAATTATATGTCTTATTACCTTGCTCCTTGCTTGTTGGTGGTCGTGGTCCATTAGTTGGTGAGAGCATGTATAGACATCCATATGCCCACTTATCTTAAAGAAGGTAGTCTTTAAGCTTACGAGCTCTAATCCTCCATTCACATGTCTCATGTTTACACTTAACAACCAACAGAGACTTCGTGGATTTGTGGACCAAAGTTTCAAAATTTTGGTGCATGGCAAATAGTGAAAATGAATATGCGAGCTCTTCCTTTGAAAGATATATCTGTCCAAGCTTGATATAGATATCGTCCTTACCAAATAACTGGTCAGTCATAAGGGTGGGCATCACAGGCAAAGACATTCTTGACTGTGCAAAACTAGTTCCAACCAATGGTGCTTCATCACCGAAAAATTCCTGATCAACATCCTCCTCCATTTCAACATCACACTCTTCAATATCATCTCCATCGCCATCCTCAGGTGATACATGATGTCCATCACATTCATAGTCTTCATCGTCGTCGTCGTTGTCATCTTCACCTACATTTTCCCCCCAATAATCTTCTTCATCGAGTCCCCCTTGTACACCAAAATTTTCCTGCCCCAAACCATATCTTGAAGATGACGGACCCTCTTGTTAAAAATTGTATGGGTCAATGAAGAAACTATCGTCGCTAGGTCAATTGGGATTACGTTATTCATTAAGGGGGTTAGTGAAGATACATAACCATATAAATCATCGTGTGATGGAAAATATTCTTCAATGGATGCTGGTGTAGTGGAAGGTGGTGTGGGGTAATAAGGGGGTGGGTATTCTTGCCCTAAGTTATACGGAAAGTTTGGATGGTATGAGCAGTTGGGGCTTTTCATGTTACTTCCCAATCCACCACTATACTTGATGCTCGTTGATAAATATATAGGAGGCCTACATGCATCATCTCCATTTAAAAAAGAAACTTAGTTCCTGGTCATTTCTTATCAAGTAGGTAGGAACTCTCGATTCAAAATTGTATAGACATCTTAAAATAAGGTCATGATGGTTCTGGTCAATCCCACTAAGTTTATACAACTCTAATAAAAATTTCTCATACCTAATATCACCTCTTACTTTCAAACCCACAAGATTACCTCCTATGTAATCTCGTTCATCCTCATTCCAAGTGCAACCGTAGTAAACAAATATGCGAGGCATTCTACAAATAGATTTAATAGTCGTCAACAGAAGATATAAAACAAGCAAACAAGCAGGAAAAAAAAAAAGAGAGATTTGTGATTTTTCCAATAAGGCTTACAACCTTACATGAAAAATCACATATCCCTTTTTTTTTTAAGAGAAATAACATCTTCCTTCTTTCTTCCCATAGATGGCCGCAAACTTTGATAATTTCAAGAACAAAAACTTCTCCCTCCCACAACAAAACTATCTTTTTTTTTTCCAAAAATTGACTACATGGAACAAAAAAAAAATATAAAACAAACTATAATGTACCCTACCCCACATGGATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATCAAACAACCTACATACCTGGCTCGTGTATGAAAGGGACCCCCAAAATGAAAGGAAACAAAATTCTCTGAAATTGGGACCCTAAAGTATAAGCTTTTTTCGTGAAAGTGAGTGAAACCAAAGTGGAAAATGAAAATTTTAAGGAAATGGGAAATAGAAAGTTTAAGGTTTAACTGAAGTTCTAGGTTTGAAAACTTTGTTAGAGTTAAGTAAATTTATAACTTAAAGCAAATTAAAGACAATTAGATGAGATATAAATTGGGGGTATTACTGACTTTTCACCATGTAGAACACAACTAGAGGTTAGAAAAAAAAAGTTTTTAAAATTGGGTCCATCAAAAACTTTTTTGAATTAGAAATAACAATTTCCGAATAGATATATGTGGTGGATTTTGGAGGTGGGGAAGGAGTGGCGGCATAAGACAGCGGTGTATTTCACACAGTCCTGTGCCGTGAACAACATTATTTCCATGTTTACAGAAGAGAAATTAAGCTGGCATTGGCGGCGGAGGAGGATATTCAGATCGGCGGAATGTCGCCGCTAACGATGGCAGAGGTGCCGTCATCTTATCCGGGGTTTTTGGATTTGGTGATTAATCAGTTTCGAAACGTTGAGGAAGCCGATTGGTTATTGTGCAATAGTTTCTACGAACAAGAACAACATGTTTGTGCACCAAACTCTATATCTACCTCTTCAAAAATTATAATATTACTAATGTTTTTTTAA

mRNA sequence

ATGAGAAGAGAAATTAAGCTGGCATTGGCGGCGGAGGAGGATATTCAGATCGGCGGAATGTCGCCGCTAACGATGGCAGAGGTGCCGTCATCTTATCCGGGGTTTTTGGATTTGGTGATTAATCAGTTTCGAAACGTTGAGGAAGCCGATTGGTTATTGTGCAATAGTTTCTACGAACAAGAACAACATGTTTGTGCACCAAACTCTATATCTACCTCTTCAAAAATTATAATATTACTAATGTTTTTTTAA

Coding sequence (CDS)

ATGAGAAGAGAAATTAAGCTGGCATTGGCGGCGGAGGAGGATATTCAGATCGGCGGAATGTCGCCGCTAACGATGGCAGAGGTGCCGTCATCTTATCCGGGGTTTTTGGATTTGGTGATTAATCAGTTTCGAAACGTTGAGGAAGCCGATTGGTTATTGTGCAATAGTTTCTACGAACAAGAACAACATGTTTGTGCACCAAACTCTATATCTACCTCTTCAAAAATTATAATATTACTAATGTTTTTTTAA

Protein sequence

MRREIKLALAAEEDIQIGGMSPLTMAEVPSSYPGFLDLVINQFRNVEEADWLLCNSFYEQEQHVCAPNSISTSSKIIILLMFF
Homology
[Close]
BLAST of Clc09G12185.1 vs. NCBI nr
Match: XP_038887939.1 (UDP-glycosyltransferase 74G1-like [Benincasa hispida])

HSP 1 Score: 95.5 bits (236), Expect = 2.3e-16
Identity = 46/69 (66.67%), Postives = 56/69 (81.16%), Query Frame = 0 

Query: 2   RREIKLALAAEEDIQIGGMSPLTMAEVPS------SYPGFLDLVINQFRNVEEADWLLCN 61
           R EIKL LAAEE+I+IGG+ PLT A++PS      S PGF D+V+NQFRN+EEADWL+CN
Sbjct: 157 RGEIKLPLAAEEEIKIGGIPPLTAADLPSFVKDVKSCPGFWDVVVNQFRNIEEADWLMCN 216

Query: 62  SFYEQEQHV 65
           SFYEQE+ V
Sbjct: 217 SFYEQEKQV 225

[Close]
BLAST of Clc09G12185.1 vs. NCBI nr
Match: XP_023554035.1 (UDP-glycosyltransferase 74G1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 88.6 bits (218), Expect = 2.8e-14
Identity = 46/82 (56.10%), Postives = 54/82 (65.85%), Query Frame = 0 

Query: 2   RREIKLALAAEEDIQIGGMSPLTMAEVPS------SYPGFLDLVINQFRNVEEADWLLCN 61
           R EIK+ + AEE+I+I GM PLT A++PS       YPGF D+VINQF NVEEADWL+CN
Sbjct: 157 RGEIKVPVVAEEEIRIAGMPPLTTADMPSFIQVVNPYPGFSDVVINQFENVEEADWLVCN 216

Query: 62  SFYEQEQHVCAPNSISTSSKII 78
           SFYE E  V        S K I
Sbjct: 217 SFYELEHQVLEGMKNKLSMKTI 238

[Close]
BLAST of Clc09G12185.1 vs. NCBI nr
Match: XP_023554036.1 (UDP-glycosyltransferase 74G1-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 88.6 bits (218), Expect = 2.8e-14
Identity = 46/82 (56.10%), Postives = 54/82 (65.85%), Query Frame = 0 

Query: 2   RREIKLALAAEEDIQIGGMSPLTMAEVPS------SYPGFLDLVINQFRNVEEADWLLCN 61
           R EIK+ + AEE+I+I GM PLT A++PS       YPGF D+VINQF NVEEADWL+CN
Sbjct: 157 RGEIKVPVVAEEEIRIAGMPPLTTADMPSFIQVVNPYPGFSDVVINQFENVEEADWLVCN 216

Query: 62  SFYEQEQHVCAPNSISTSSKII 78
           SFYE E  V        S K I
Sbjct: 217 SFYELEHQVLEGMKNKLSMKTI 238

[Close]
BLAST of Clc09G12185.1 vs. NCBI nr
Match: XP_022157619.1 (UDP-glycosyltransferase 74F2-like [Momordica charantia])

HSP 1 Score: 87.0 bits (214), Expect = 8.1e-14
Identity = 42/69 (60.87%), Postives = 52/69 (75.36%), Query Frame = 0 

Query: 2   RREIKLALAAEEDIQIGGMSPLTMAEVPS------SYPGFLDLVINQFRNVEEADWLLCN 61
           R EIK+   A E+I+I GM PLT+A++PS       YPGF D+VINQFRN+EEADW++CN
Sbjct: 155 RGEIKVPPPAGEEIRIAGMPPLTVADMPSFVQDRNPYPGFFDVVINQFRNIEEADWVVCN 214

Query: 62  SFYEQEQHV 65
           SFYE EQ V
Sbjct: 215 SFYELEQQV 223

[Close]
BLAST of Clc09G12185.1 vs. NCBI nr
Match: KAG6571602.1 (UDP-glycosyltransferase 74F2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 86.7 bits (213), Expect = 1.1e-13
Identity = 46/71 (64.79%), Postives = 52/71 (73.24%), Query Frame = 0 

Query: 2   RREIK--LALAAEEDIQIGGMSPLTMAEVPS------SYPGFLDLVINQFRNVEEADWLL 61
           R EIK  +  AAEE+I+I GM PLTMA++PS       YPGF DLVINQF NVEEADWL+
Sbjct: 157 RGEIKAPVVAAAEEEIRIAGMPPLTMADMPSLVQVGNPYPGFSDLVINQFGNVEEADWLV 216

Query: 62  CNSFYEQEQHV 65
           CNSFYE E  V
Sbjct: 217 CNSFYELEHQV 227

[Close]
BLAST of Clc09G12185.1 vs. ExPASy TrEMBL
Match: A0A6J1DX00 (Glycosyltransferase OS=Momordica charantia OX=3673 GN=LOC111024275 PE=3 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.9e-14
Identity = 42/69 (60.87%), Postives = 52/69 (75.36%), Query Frame = 0 

Query: 2   RREIKLALAAEEDIQIGGMSPLTMAEVPS------SYPGFLDLVINQFRNVEEADWLLCN 61
           R EIK+   A E+I+I GM PLT+A++PS       YPGF D+VINQFRN+EEADW++CN
Sbjct: 155 RGEIKVPPPAGEEIRIAGMPPLTVADMPSFVQDRNPYPGFFDVVINQFRNIEEADWVVCN 214

Query: 62  SFYEQEQHV 65
           SFYE EQ V
Sbjct: 215 SFYELEQQV 223

[Close]
BLAST of Clc09G12185.1 vs. ExPASy TrEMBL
Match: A0A0A0LCG4 (Glycosyltransferase OS=Cucumis sativus OX=3659 GN=Csa_3G635870 PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 6.7e-14
Identity = 43/67 (64.18%), Postives = 49/67 (73.13%), Query Frame = 0 

Query: 4   EIKLALAAEEDIQIGGMSPLTMAEVPS------SYPGFLDLVINQFRNVEEADWLLCNSF 63
           EIKL L  EE+I++GGM  L   E+PS      S PGFL  V+NQFRN+EEADWLLCNSF
Sbjct: 159 EIKLPLGVEEEIRMGGMPALRAEEMPSFVKDVKSCPGFLATVVNQFRNIEEADWLLCNSF 218

Query: 64  YEQEQHV 65
           YEQEQ V
Sbjct: 219 YEQEQQV 225

[Close]
BLAST of Clc09G12185.1 vs. ExPASy TrEMBL
Match: A0A6J1HQB3 (Glycosyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111466835 PE=3 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 3.3e-13
Identity = 45/70 (64.29%), Postives = 51/70 (72.86%), Query Frame = 0 

Query: 2   RREIKL-ALAAEEDIQIGGMSPLTMAEVPS------SYPGFLDLVINQFRNVEEADWLLC 61
           R EIK   +AAEE+I+I GM PLTMA++PS       YP F DLVINQF NVEEADWL+C
Sbjct: 157 RGEIKAPVVAAEEEIRIAGMPPLTMADMPSLVQVGNPYPVFSDLVINQFGNVEEADWLIC 216

Query: 62  NSFYEQEQHV 65
           NSFYE E  V
Sbjct: 217 NSFYELEHQV 226

[Close]
BLAST of Clc09G12185.1 vs. ExPASy TrEMBL
Match: A0A5D3DQW9 (Glycosyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1185G00360 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.6e-12
Identity = 41/67 (61.19%), Postives = 49/67 (73.13%), Query Frame = 0 

Query: 4   EIKLALAAEEDIQIGGMSPLTMAEVPS------SYPGFLDLVINQFRNVEEADWLLCNSF 63
           EIKL L  EE+I++GGM  +   E+PS      S PGFL  V+NQFRN+EEAD+LLCNSF
Sbjct: 159 EIKLLLGGEEEIRMGGMPAMRAEEMPSFVKDVKSCPGFLATVVNQFRNIEEADFLLCNSF 218

Query: 64  YEQEQHV 65
           YEQEQ V
Sbjct: 219 YEQEQQV 225

[Close]
BLAST of Clc09G12185.1 vs. ExPASy TrEMBL
Match: A0A1S3CCV7 (Glycosyltransferase OS=Cucumis melo OX=3656 GN=LOC103499231 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.6e-12
Identity = 41/67 (61.19%), Postives = 49/67 (73.13%), Query Frame = 0 

Query: 4   EIKLALAAEEDIQIGGMSPLTMAEVPS------SYPGFLDLVINQFRNVEEADWLLCNSF 63
           EIKL L  EE+I++GGM  +   E+PS      S PGFL  V+NQFRN+EEAD+LLCNSF
Sbjct: 159 EIKLLLGGEEEIRMGGMPAMRAEEMPSFVKDVKSCPGFLATVVNQFRNIEEADFLLCNSF 218

Query: 64  YEQEQHV 65
           YEQEQ V
Sbjct: 219 YEQEQQV 225

[Close]
BLAST of Clc09G12185.1 vs. TAIR 10
Match: AT2G43820.1 (UDP-glucosyltransferase 74F2 )

HSP 1 Score: 42.7 bits (99), Expect = 1.6e-04
Identity = 18/36 (50.00%), Postives = 25/36 (69.44%), Query Frame = 0 

Query: 28  VPSSYPGFLDLVINQFRNVEEADWLLCNSFYEQEQH 64
           V  SYP + ++V+ QF N E+AD++L NSF E E H
Sbjct: 173 VSGSYPAYFEMVLQQFINFEKADFVLVNSFQELELH 208

The following BLAST results are available for this feature:
BLAST of Clc09G12185.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038887939.12.3e-1666.67UDP-glycosyltransferase 74G1-like [Benincasa hispida][more]
XP_023554035.12.8e-1456.10UDP-glycosyltransferase 74G1-like isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_023554036.12.8e-1456.10UDP-glycosyltransferase 74G1-like isoform X3 [Cucurbita pepo subsp. pepo][more]
XP_022157619.18.1e-1460.87UDP-glycosyltransferase 74F2-like [Momordica charantia][more]
KAG6571602.11.1e-1364.79UDP-glycosyltransferase 74F2, partial [Cucurbita argyrosperma subsp. sororia][more]
BLAST of Clc09G12185.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Clc09G12185.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DX003.9e-1460.87Glycosyltransferase OS=Momordica charantia OX=3673 GN=LOC111024275 PE=3 SV=1[more]
A0A0A0LCG46.7e-1464.18Glycosyltransferase OS=Cucumis sativus OX=3659 GN=Csa_3G635870 PE=3 SV=1[more]
A0A6J1HQB33.3e-1364.29Glycosyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111466835 PE=3 SV=1[more]
A0A5D3DQW91.6e-1261.19Glycosyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1185... [more]
A0A1S3CCV71.6e-1261.19Glycosyltransferase OS=Cucumis melo OX=3656 GN=LOC103499231 PE=3 SV=1[more]
BLAST of Clc09G12185.1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G43820.11.6e-0450.00UDP-glucosyltransferase 74F2 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.2000Glycogen Phosphorylase B;coord: 2..75
e-value: 1.5E-8
score: 36.4

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Clc09G12185Clc09G12185gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Clc09G12185.1-exonClc09G12185.1-exon-ClcChr09:10888258..10888262exon
Clc09G12185.1-exonClc09G12185.1-exon-ClcChr09:10891089..10891335exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Clc09G12185.1-cdsClc09G12185.1-cds-ClcChr09:10888258..10888262CDS
Clc09G12185.1-cdsClc09G12185.1-cds-ClcChr09:10891089..10891335CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Clc09G12185.1Clc09G12185.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0080043 quercetin 3-O-glucosyltransferase activity
molecular_function GO:0080044 quercetin 7-O-glucosyltransferase activity