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Clc06G00890.1 (mRNA) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAAAAAAACTCCAAAAATTGCCAATGGCCATATCTCATTATCTCTGTGTTTTCATTCTCTCCATTTTCTTCTTCTCCAATTTCCTCATTACACAATCCTCCAACAACATCAAAACATCTGATCTAATCCACAAAACTTGCAAGAAAATCTCAAGAGAAGACCCTAACATTTCCTTCAACTTTTGCTTAACATCTCTAGAATTTGCCACCAAGCATAGCCGATGCACCGATGTTCGTCGCCTCGGCCTCCTCTCGATTGGGCTCCTACATAGGAATGTGACCAGCACCCGCCACCATATCGTAAAGTTGATGAGAAACAAGAAGCTTGACCCGTTTGTTAAGTTATGTTTGGATGATTGTTTGGAGCTTTATTCCGATGCGATCCCGACGGTGAAGCAGGCGATGAGGGATTATAGGTTGAAACGATACGACGATGCGAACATCGCGATTAGTTCCGTGATGGATGCAGCAACGACATGTGAGGATGGGTTTAAGGAGAGGGAAGGGGTGGCTTCACCATTGAAGAAGAGGGATGAAGATGCTTTTGAATTGGGAGCCATTACTCTATCCATTATGAGTTTGCTTCGTTAAGTCAATTCAATTCTATGACTTAGGTTTGTGTAATTAAAAGTTCTAATTTAATTCTTATGATTTGAGTTTAGTATTTGAAGTTTCACTTTGAAATTTGGTATGCTTTTTAGTCTTAAGGTAGATAAATTAGAAATAACATTTGAATTCTAGTGTGATCTAAGAAATAGATAAGAAAGGATGAATAAATGTAGAGATAATTTGTGAAATTTAACTAAATTATAGAAACAAACTTAAGATTCTC AAAAAAAAAAAAACTCCAAAAATTGCCAATGGCCATATCTCATTATCTCTGTGTTTTCATTCTCTCCATTTTCTTCTTCTCCAATTTCCTCATTACACAATCCTCCAACAACATCAAAACATCTGATCTAATCCACAAAACTTGCAAGAAAATCTCAAGAGAAGACCCTAACATTTCCTTCAACTTTTGCTTAACATCTCTAGAATTTGCCACCAAGCATAGCCGATGCACCGATGTTCGTCGCCTCGGCCTCCTCTCGATTGGGCTCCTACATAGGAATGTGACCAGCACCCGCCACCATATCGTAAAGTTGATGAGAAACAAGAAGCTTGACCCGTTTGTTAAGTTATGTTTGGATGATTGTTTGGAGCTTTATTCCGATGCGATCCCGACGGTGAAGCAGGCGATGAGGGATTATAGGTTGAAACGATACGACGATGCGAACATCGCGATTAGTTCCGTGATGGATGCAGCAACGACATGTGAGGATGGGTTTAAGGAGAGGGAAGGGGTGGCTTCACCATTGAAGAAGAGGGATGAAGATGCTTTTGAATTGGGAGCCATTACTCTATCCATTATGAGTTTGCTTCGTTAAGTCAATTCAATTCTATGACTTAGGTTTGTGTAATTAAAAGTTCTAATTTAATTCTTATGATTTGAGTTTAGTATTTGAAGTTTCACTTTGAAATTTGGTATGCTTTTTAGTCTTAAGGTAGATAAATTAGAAATAACATTTGAATTCTAGTGTGATCTAAGAAATAGATAAGAAAGGATGAATAAATGTAGAGATAATTTGTGAAATTTAACTAAATTATAGAAACAAACTTAAGATTCTC ATGGCCATATCTCATTATCTCTGTGTTTTCATTCTCTCCATTTTCTTCTTCTCCAATTTCCTCATTACACAATCCTCCAACAACATCAAAACATCTGATCTAATCCACAAAACTTGCAAGAAAATCTCAAGAGAAGACCCTAACATTTCCTTCAACTTTTGCTTAACATCTCTAGAATTTGCCACCAAGCATAGCCGATGCACCGATGTTCGTCGCCTCGGCCTCCTCTCGATTGGGCTCCTACATAGGAATGTGACCAGCACCCGCCACCATATCGTAAAGTTGATGAGAAACAAGAAGCTTGACCCGTTTGTTAAGTTATGTTTGGATGATTGTTTGGAGCTTTATTCCGATGCGATCCCGACGGTGAAGCAGGCGATGAGGGATTATAGGTTGAAACGATACGACGATGCGAACATCGCGATTAGTTCCGTGATGGATGCAGCAACGACATGTGAGGATGGGTTTAAGGAGAGGGAAGGGGTGGCTTCACCATTGAAGAAGAGGGATGAAGATGCTTTTGAATTGGGAGCCATTACTCTATCCATTATGAGTTTGCTTCGTTAA MAISHYLCVFILSIFFFSNFLITQSSNNIKTSDLIHKTCKKISREDPNISFNFCLTSLEFATKHSRCTDVRRLGLLSIGLLHRNVTSTRHHIVKLMRNKKLDPFVKLCLDDCLELYSDAIPTVKQAMRDYRLKRYDDANIAISSVMDAATTCEDGFKEREGVASPLKKRDEDAFELGAITLSIMSLLR Homology
BLAST of Clc06G00890.1 vs. NCBI nr
Match: KAA0039956.1 (putative invertase inhibitor [Cucumis melo var. makuwa] >TYK24547.1 putative invertase inhibitor [Cucumis melo var. makuwa]) HSP 1 Score: 320.1 bits (819), Expect = 1.3e-83 Identity = 161/188 (85.64%), Postives = 172/188 (91.49%), Query Frame = 0
BLAST of Clc06G00890.1 vs. NCBI nr
Match: XP_008460048.1 (PREDICTED: putative invertase inhibitor [Cucumis melo]) HSP 1 Score: 318.9 bits (816), Expect = 2.9e-83 Identity = 160/188 (85.11%), Postives = 172/188 (91.49%), Query Frame = 0
BLAST of Clc06G00890.1 vs. NCBI nr
Match: XP_004145026.1 (putative invertase inhibitor [Cucumis sativus]) HSP 1 Score: 312.8 bits (800), Expect = 2.1e-81 Identity = 157/187 (83.96%), Postives = 168/187 (89.84%), Query Frame = 0
BLAST of Clc06G00890.1 vs. NCBI nr
Match: KAE8646718.1 (hypothetical protein Csa_005009 [Cucumis sativus]) HSP 1 Score: 299.7 bits (766), Expect = 1.8e-77 Identity = 150/179 (83.80%), Postives = 161/179 (89.94%), Query Frame = 0
BLAST of Clc06G00890.1 vs. NCBI nr
Match: XP_038875573.1 (putative invertase inhibitor [Benincasa hispida]) HSP 1 Score: 283.9 bits (725), Expect = 1.0e-72 Identity = 145/187 (77.54%), Postives = 160/187 (85.56%), Query Frame = 0
BLAST of Clc06G00890.1 vs. ExPASy Swiss-Prot
Match: Q8GT41 (Putative invertase inhibitor OS=Platanus acerifolia OX=140101 PE=1 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 5.5e-29 Identity = 67/178 (37.64%), Postives = 121/178 (67.98%), Query Frame = 0
BLAST of Clc06G00890.1 vs. ExPASy Swiss-Prot
Match: A9YUH4 (Putative invertase inhibitor OS=Platanus orientalis OX=122832 PE=1 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 1.4e-27 Identity = 60/157 (38.22%), Postives = 109/157 (69.43%), Query Frame = 0
BLAST of Clc06G00890.1 vs. ExPASy Swiss-Prot
Match: Q9FJR5 (Pectinesterase inhibitor 12 OS=Arabidopsis thaliana OX=3702 GN=PMEI12 PE=2 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 1.4e-11 Identity = 51/179 (28.49%), Postives = 90/179 (50.28%), Query Frame = 0
BLAST of Clc06G00890.1 vs. ExPASy TrEMBL
Match: A0A5A7TCY0 (Putative invertase inhibitor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00920 PE=4 SV=1) HSP 1 Score: 320.1 bits (819), Expect = 6.2e-84 Identity = 161/188 (85.64%), Postives = 172/188 (91.49%), Query Frame = 0
BLAST of Clc06G00890.1 vs. ExPASy TrEMBL
Match: A0A1S3CBQ9 (putative invertase inhibitor OS=Cucumis melo OX=3656 GN=LOC103498981 PE=4 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 1.4e-83 Identity = 160/188 (85.11%), Postives = 172/188 (91.49%), Query Frame = 0
BLAST of Clc06G00890.1 vs. ExPASy TrEMBL
Match: A0A0A0K951 (PMEI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G080380 PE=4 SV=1) HSP 1 Score: 312.8 bits (800), Expect = 1.0e-81 Identity = 157/187 (83.96%), Postives = 168/187 (89.84%), Query Frame = 0
BLAST of Clc06G00890.1 vs. ExPASy TrEMBL
Match: A0A6J1KH00 (putative invertase inhibitor OS=Cucurbita maxima OX=3661 GN=LOC111494271 PE=4 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 7.9e-63 Identity = 135/187 (72.19%), Postives = 158/187 (84.49%), Query Frame = 0
BLAST of Clc06G00890.1 vs. ExPASy TrEMBL
Match: A0A6J1HN05 (putative invertase inhibitor OS=Cucurbita moschata OX=3662 GN=LOC111464420 PE=4 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 1.4e-62 Identity = 134/187 (71.66%), Postives = 157/187 (83.96%), Query Frame = 0
BLAST of Clc06G00890.1 vs. TAIR 10
Match: AT5G46940.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein ) HSP 1 Score: 91.3 bits (225), Expect = 9.1e-19 Identity = 51/180 (28.33%), Postives = 96/180 (53.33%), Query Frame = 0
BLAST of Clc06G00890.1 vs. TAIR 10
Match: AT5G46970.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein ) HSP 1 Score: 89.7 bits (221), Expect = 2.6e-18 Identity = 54/162 (33.33%), Postives = 91/162 (56.17%), Query Frame = 0
BLAST of Clc06G00890.1 vs. TAIR 10
Match: AT5G38610.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein ) HSP 1 Score: 86.3 bits (212), Expect = 2.9e-17 Identity = 62/188 (32.98%), Postives = 96/188 (51.06%), Query Frame = 0
BLAST of Clc06G00890.1 vs. TAIR 10
Match: AT5G46930.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein ) HSP 1 Score: 77.4 bits (189), Expect = 1.4e-14 Identity = 54/188 (28.72%), Postives = 94/188 (50.00%), Query Frame = 0
BLAST of Clc06G00890.1 vs. TAIR 10
Match: AT5G46950.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein ) HSP 1 Score: 72.4 bits (176), Expect = 4.4e-13 Identity = 52/179 (29.05%), Postives = 92/179 (51.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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