Clc05G25740.1 (mRNA) Watermelon (cordophanus) v2

Overview


Name	Clc05G25740.1
Type	mRNA
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Unknown protein
Location	ClcChr05: 33502880 .. 33503206 (-)
Sequence length	231
RNA-Seq Expression	Clc05G25740.1
Synteny	Clc05G25740.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGCGATTACGTCCCTCTTGCAACTTTTACGAAATGTTGGCCATTACCGAGATATATGGCCCGTTCTATGTGAGCCCATTAGGCCCAATACGACGAGCGGACTAGCACAGTACGGACACGAAATGGGTCGGGTATTGACCCGTTCGAAGAACGGGTGAAGGAAAATGTCTAGGAGGACGTAGGTTTAGGGAGGGTTTAATGGCGGCCACTTGGGCTCTCTTCTCCAGTCTCCCACTACTTTGAGATCTTTACCTTCACTCCCTCCCTTCTCGCTTTTGAATTCTTCTTCTTCAAGCTTGTTTCCTCAGTTTCTCCCTTCCTGA

mRNA sequence

ATGGGGGCGATTACGTCCCTCTTGCAACTTTTACGAAATGTTGGCCATTACCGAGATATATGGCCCGTTCTATGTGAGCCCATTAGGCCCAATACGACGAGCGGACTAGCACAGTACGGACACGAAATGGGTCGGTCTCCCACTACTTTGAGATCTTTACCTTCACTCCCTCCCTTCTCGCTTTTGAATTCTTCTTCTTCAAGCTTGTTTCCTCAGTTTCTCCCTTCCTGA

Coding sequence (CDS)

ATGGGGGCGATTACGTCCCTCTTGCAACTTTTACGAAATGTTGGCCATTACCGAGATATATGGCCCGTTCTATGTGAGCCCATTAGGCCCAATACGACGAGCGGACTAGCACAGTACGGACACGAAATGGGTCGGTCTCCCACTACTTTGAGATCTTTACCTTCACTCCCTCCCTTCTCGCTTTTGAATTCTTCTTCTTCAAGCTTGTTTCCTCAGTTTCTCCCTTCCTGA

Protein sequence

MGAITSLLQLLRNVGHYRDIWPVLCEPIRPNTTSGLAQYGHEMGRSPTTLRSLPSLPPFSLLNSSSSSLFPQFLPS

Homology

The following BLAST results are available for this feature:

BLAST of Clc05G25740.1 vs.


Match Name	E-value	Identity	Description

BLAST of Clc05G25740.1 vs.


Match Name	E-value	Identity	Description

BLAST of Clc05G25740.1 vs.


Match Name	E-value	Identity	Description

BLAST of Clc05G25740.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Clc05G25740	Clc05G25740	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc05G25740.1-exon	Clc05G25740.1-exon-ClcChr05:33502880..33502975	exon
Clc05G25740.1-exon	Clc05G25740.1-exon-ClcChr05:33503072..33503206	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc05G25740.1-cds	Clc05G25740.1-cds-ClcChr05:33502880..33502975	CDS
Clc05G25740.1-cds	Clc05G25740.1-cds-ClcChr05:33503072..33503206	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Clc05G25740.1	Clc05G25740.1-protein	polypeptide