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Clc05G07130.1 (mRNA) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGATTTTGGAAAAGTTTCAGAACCAAAATCAAATAAAATTGAAAGTTGGAAAACCAAAATTAAAATTTGAACCTAAAAGAATTCGTCCCATTTTGTTAAAACCTTTTTCTGTAAGTAAAAGCAAACCAAGCACCATCGTCTTCTTCATACATTTGCGTATAAGCAAAATCCAATCCAAACCCACTCAACAACAAAACTCCCCAATTTCTCCCTTCTTCAATCCATTTATTTAAATCTCCAAATTCTTCTTCAATCACACCCAACCAGATGCCTCGAACCAAACCAAAATCAAGAACAACCAAAACAAAATCAATCAAATCCCCTCAATTCATGGCTTCCTCCCCCACAGAGAAAACCCTAACCGGCGTCGGAAACCTAATCCGCCTCCTCCCCACCGGCACCGTCTTCCTCTTCCAATTCCTCAGCCCAATCCTCACCAACAGCGGCCACTGCGAACCAATCAACAAATCCTTCTCTATTATCCTCATCATTCTCTGCGGTCTCTCCTGTTTTCTCTCCTCCTTCACTGATTCCTACACCGGCGACGACGGTGCTCTGCACTGGGGATTCGCTACGCCGTCAGGAATGTGGCCGGCGCCGGAGTCGAAAACGGTGGATCTTTCACCCTACAAGCTTAGGGCAGGGGATTTCGTACACGCCTCTTTTTCCGCTCTGGTTTTTGGGGCTTTGGTGGTTCTCGACTCCGATACGGTGCAGTGCTTCTTCCCGAGCTTTGAGGCGGCGGATAAGTTGTTGGTTCAGGTTCTGCCGCCGGTCGTTGGAGCGGTGTCTAGCGTGGTGTTTGTGATGTTCCCTAACACTCGCCATGGGATTGGGTATTATGATTCCTCTGCAGCAACTTCCGGCGCGGCGATTCAACGAGCGGCCTGAGGAAGGGCTGAGCTTAAATATATAATATCATAAATTGATTAATATTTTGAAATTTTAATTTATGGTTTTAGGGTCTGGGCCAAAAATAGGGGGTTGTTTATTGGATTTTAATTTCCGTTGGATTGGATGATTGGATTTCACATGAGATACTCCTAAAATGCATTTTCAAATTTTAATTTAAAAAAAAAAAGTTTTATCCATGAATATTGTGAAT TGATTTTGGAAAAGTTTCAGAACCAAAATCAAATAAAATTGAAAGTTGGAAAACCAAAATTAAAATTTGAACCTAAAAGAATTCGTCCCATTTTGTTAAAACCTTTTTCTGTAAGTAAAAGCAAACCAAGCACCATCGTCTTCTTCATACATTTGCGTATAAGCAAAATCCAATCCAAACCCACTCAACAACAAAACTCCCCAATTTCTCCCTTCTTCAATCCATTTATTTAAATCTCCAAATTCTTCTTCAATCACACCCAACCAGATGCCTCGAACCAAACCAAAATCAAGAACAACCAAAACAAAATCAATCAAATCCCCTCAATTCATGGCTTCCTCCCCCACAGAGAAAACCCTAACCGGCGTCGGAAACCTAATCCGCCTCCTCCCCACCGGCACCGTCTTCCTCTTCCAATTCCTCAGCCCAATCCTCACCAACAGCGGCCACTGCGAACCAATCAACAAATCCTTCTCTATTATCCTCATCATTCTCTGCGGTCTCTCCTGTTTTCTCTCCTCCTTCACTGATTCCTACACCGGCGACGACGGTGCTCTGCACTGGGGATTCGCTACGCCGTCAGGAATGTGGCCGGCGCCGGAGTCGAAAACGGTGGATCTTTCACCCTACAAGCTTAGGGCAGGGGATTTCGTACACGCCTCTTTTTCCGCTCTGGTTTTTGGGGCTTTGGTGGTTCTCGACTCCGATACGGTGCAGTGCTTCTTCCCGAGCTTTGAGGCGGCGGATAAGTTGTTGGTTCAGGTTCTGCCGCCGGTCGTTGGAGCGGTGTCTAGCGTGGTGTTTGTGATGTTCCCTAACACTCGCCATGGGATTGGGTATTATGATTCCTCTGCAGCAACTTCCGGCGCGGCGATTCAACGAGCGGCCTGAGGAAGGGCTGAGCTTAAATATATAATATCATAAATTGATTAATATTTTGAAATTTTAATTTATGGTTTTAGGGTCTGGGCCAAAAATAGGGGGTTGTTTATTGGATTTTAATTTCCGTTGGATTGGATGATTGGATTTCACATGAGATACTCCTAAAATGCATTTTCAAATTTTAATTTAAAAAAAAAAAGTTTTATCCATGAATATTGTGAAT ATGCCTCGAACCAAACCAAAATCAAGAACAACCAAAACAAAATCAATCAAATCCCCTCAATTCATGGCTTCCTCCCCCACAGAGAAAACCCTAACCGGCGTCGGAAACCTAATCCGCCTCCTCCCCACCGGCACCGTCTTCCTCTTCCAATTCCTCAGCCCAATCCTCACCAACAGCGGCCACTGCGAACCAATCAACAAATCCTTCTCTATTATCCTCATCATTCTCTGCGGTCTCTCCTGTTTTCTCTCCTCCTTCACTGATTCCTACACCGGCGACGACGGTGCTCTGCACTGGGGATTCGCTACGCCGTCAGGAATGTGGCCGGCGCCGGAGTCGAAAACGGTGGATCTTTCACCCTACAAGCTTAGGGCAGGGGATTTCGTACACGCCTCTTTTTCCGCTCTGGTTTTTGGGGCTTTGGTGGTTCTCGACTCCGATACGGTGCAGTGCTTCTTCCCGAGCTTTGAGGCGGCGGATAAGTTGTTGGTTCAGGTTCTGCCGCCGGTCGTTGGAGCGGTGTCTAGCGTGGTGTTTGTGATGTTCCCTAACACTCGCCATGGGATTGGGTATTATGATTCCTCTGCAGCAACTTCCGGCGCGGCGATTCAACGAGCGGCCTGA MPRTKPKSRTTKTKSIKSPQFMASSPTEKTLTGVGNLIRLLPTGTVFLFQFLSPILTNSGHCEPINKSFSIILIILCGLSCFLSSFTDSYTGDDGALHWGFATPSGMWPAPESKTVDLSPYKLRAGDFVHASFSALVFGALVVLDSDTVQCFFPSFEAADKLLVQVLPPVVGAVSSVVFVMFPNTRHGIGYYDSSAATSGAAIQRAA Homology
BLAST of Clc05G07130.1 vs. NCBI nr
Match: XP_038903964.1 (protein DMP2-like [Benincasa hispida]) HSP 1 Score: 369.4 bits (947), Expect = 2.0e-98 Identity = 189/210 (90.00%), Postives = 200/210 (95.24%), Query Frame = 0
BLAST of Clc05G07130.1 vs. NCBI nr
Match: XP_008438763.1 (PREDICTED: uncharacterized protein LOC103483776 [Cucumis melo]) HSP 1 Score: 368.2 bits (944), Expect = 4.5e-98 Identity = 188/209 (89.95%), Postives = 195/209 (93.30%), Query Frame = 0
BLAST of Clc05G07130.1 vs. NCBI nr
Match: XP_004134465.3 (protein DMP2 [Cucumis sativus] >KAE8650371.1 hypothetical protein Csa_010002 [Cucumis sativus]) HSP 1 Score: 362.8 bits (930), Expect = 1.9e-96 Identity = 186/204 (91.18%), Postives = 190/204 (93.14%), Query Frame = 0
BLAST of Clc05G07130.1 vs. NCBI nr
Match: KAA0049424.1 (putative transmembrane protein [Cucumis melo var. makuwa]) HSP 1 Score: 353.2 bits (905), Expect = 1.5e-93 Identity = 175/186 (94.09%), Postives = 180/186 (96.77%), Query Frame = 0
BLAST of Clc05G07130.1 vs. NCBI nr
Match: XP_022975703.1 (protein DMP2-like [Cucurbita maxima]) HSP 1 Score: 352.4 bits (903), Expect = 2.6e-93 Identity = 178/202 (88.12%), Postives = 188/202 (93.07%), Query Frame = 0
BLAST of Clc05G07130.1 vs. ExPASy Swiss-Prot
Match: Q9LVF1 (Protein DMP2 OS=Arabidopsis thaliana OX=3702 GN=DMP2 PE=2 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 1.1e-49 Identity = 91/163 (55.83%), Postives = 123/163 (75.46%), Query Frame = 0
BLAST of Clc05G07130.1 vs. ExPASy Swiss-Prot
Match: Q9LVF4 (Protein DMP1 OS=Arabidopsis thaliana OX=3702 GN=DMP1 PE=2 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 1.6e-45 Identity = 92/180 (51.11%), Postives = 117/180 (65.00%), Query Frame = 0
BLAST of Clc05G07130.1 vs. ExPASy Swiss-Prot
Match: Q9M897 (Protein DMP5 OS=Arabidopsis thaliana OX=3702 GN=DMP5 PE=2 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 1.1e-35 Identity = 76/186 (40.86%), Postives = 115/186 (61.83%), Query Frame = 0
BLAST of Clc05G07130.1 vs. ExPASy Swiss-Prot
Match: Q9FNL3 (Protein DMP6 OS=Arabidopsis thaliana OX=3702 GN=DMP6 PE=2 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 1.5e-35 Identity = 82/166 (49.40%), Postives = 103/166 (62.05%), Query Frame = 0
BLAST of Clc05G07130.1 vs. ExPASy Swiss-Prot
Match: Q8L928 (Protein DMP4 OS=Arabidopsis thaliana OX=3702 GN=DMP4 PE=2 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 8.2e-34 Identity = 80/170 (47.06%), Postives = 104/170 (61.18%), Query Frame = 0
BLAST of Clc05G07130.1 vs. ExPASy TrEMBL
Match: A0A1S3AXU6 (uncharacterized protein LOC103483776 OS=Cucumis melo OX=3656 GN=LOC103483776 PE=3 SV=1) HSP 1 Score: 368.2 bits (944), Expect = 2.2e-98 Identity = 188/209 (89.95%), Postives = 195/209 (93.30%), Query Frame = 0
BLAST of Clc05G07130.1 vs. ExPASy TrEMBL
Match: A0A0A0LAH2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G150800 PE=3 SV=1) HSP 1 Score: 360.1 bits (923), Expect = 6.0e-96 Identity = 185/204 (90.69%), Postives = 189/204 (92.65%), Query Frame = 0
BLAST of Clc05G07130.1 vs. ExPASy TrEMBL
Match: A0A5A7U2F8 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G006730 PE=3 SV=1) HSP 1 Score: 353.2 bits (905), Expect = 7.3e-94 Identity = 175/186 (94.09%), Postives = 180/186 (96.77%), Query Frame = 0
BLAST of Clc05G07130.1 vs. ExPASy TrEMBL
Match: A0A6J1IK18 (protein DMP2-like OS=Cucurbita maxima OX=3661 GN=LOC111475715 PE=3 SV=1) HSP 1 Score: 352.4 bits (903), Expect = 1.2e-93 Identity = 178/202 (88.12%), Postives = 188/202 (93.07%), Query Frame = 0
BLAST of Clc05G07130.1 vs. ExPASy TrEMBL
Match: A0A6J1GS26 (protein DMP2-like OS=Cucurbita moschata OX=3662 GN=LOC111456470 PE=3 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 1.1e-92 Identity = 179/202 (88.61%), Postives = 188/202 (93.07%), Query Frame = 0
BLAST of Clc05G07130.1 vs. TAIR 10
Match: AT3G21550.1 (DUF679 domain membrane protein 2 ) HSP 1 Score: 198.0 bits (502), Expect = 7.6e-51 Identity = 91/163 (55.83%), Postives = 123/163 (75.46%), Query Frame = 0
BLAST of Clc05G07130.1 vs. TAIR 10
Match: AT3G21520.1 (DUF679 domain membrane protein 1 ) HSP 1 Score: 184.1 bits (466), Expect = 1.1e-46 Identity = 92/180 (51.11%), Postives = 117/180 (65.00%), Query Frame = 0
BLAST of Clc05G07130.1 vs. TAIR 10
Match: AT3G02430.1 (Protein of unknown function (DUF679) ) HSP 1 Score: 151.4 bits (381), Expect = 8.1e-37 Identity = 76/186 (40.86%), Postives = 115/186 (61.83%), Query Frame = 0
BLAST of Clc05G07130.1 vs. TAIR 10
Match: AT5G46090.1 (Protein of unknown function (DUF679) ) HSP 1 Score: 151.0 bits (380), Expect = 1.1e-36 Identity = 82/166 (49.40%), Postives = 103/166 (62.05%), Query Frame = 0
BLAST of Clc05G07130.1 vs. TAIR 10
Match: AT4G18425.1 (Protein of unknown function (DUF679) ) HSP 1 Score: 145.2 bits (365), Expect = 5.8e-35 Identity = 80/170 (47.06%), Postives = 104/170 (61.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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