Clc03G03700.2 (mRNA) Watermelon (cordophanus) v2

Overview
NameClc03G03700.2
TypemRNA
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
LocationClcChr03: 3699739 .. 3700867 (+)
Sequence length354
RNA-Seq ExpressionClc03G03700.2
SyntenyClc03G03700.2
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAAGAGCCGTTCAAATGGACAACGAACTAATCAAAATAACAAATCCAACAAAGATCATGTGACAATTAAAACATGTTACTTATACATGATTGTAAGGTAAATTGATATAGTATTAAGAAAGAAAAAAAAAAAAAAAAAAAAGGAAAAACTATTTTTTTTTGTCACATCTTAGGTCTAGTTTCTAGTTTGGTCCTTAAGTTTTAAAATCTTACACATTTAATCTCCAAATTTTGAGTTTGGTTTCAATTTAGTCTCTAAATTTCAAAATGTTACAATTTTATATATGTGATTTGAGTTTTATTTTAATTTAGTCTCTAAGTTTTAAGATTTTACATTTTTAACCTCAAGTTTTCATTTAATACTTACTTTCAATTATTGATGTTAACGTGTGTATATTAAATTACAAGTTAGTGCTTAAACTTTCAAGTTTGGATCTATTTTGTGAATAAATGTAATCAATCTCCGAACTTTCAATTTTTATATTTAATAGATCTACGGACTTTAAAAATGTCTACAAATTTTTAAAATTTTAATTTTGTATCTAATAAGTCGATGGGATCTAATTAAAAATATATAAATCTATTAAATACAAAATTAAAAACTTAAGAATGTAGTAGACACCTTGTCTGAATTTGTTAACTTAATTATATTTTTTCAATATCAACAACTTTTACTTTTTTTTTTTTTTTTTTCATTTTGAAGATAAAAGTAGAGTTATCCACCACAAATTTTGCAAGATATAAAGCAGAAGCCTTTCCAAATATTTATTAAAAAAAAAAAAAAAAAAGTCAGTATCTAGGCCCAAAAAAACTGATTAGCTGACGAGTGTCTAGGCCCAAAATGCTAAAGGATTGGGCTCGGCCGAAAAGCCCAATCCTTGTCTTCATCCTTGAGTTGAGTAAAACTTGGCGCTTGCAAAGAAAGGCCGTCAATGGAACCCGCCGAGTAAAACCGGAGCTCCTTCTTTGGCTCTGCGGATTCGACAAAGACACTTTCAGACTGGTTTTAGAGCAAGAAACAGAGGCTCGTGACTCTGGGACTTCAGAATTCTTCATAAAGAGTTATCTCCTTTTCTTAAATTCCCCGTTTCTTTTTCCTTTTTCTCCCCTTTATTTCGTCTGTTAA

mRNA sequence

ATGCAAAGAGCCGTTCAAATGGACAACGAACTAATCAAAATAACAAATCCAACAAAGATCATGCCCAAAATGCTAAAGGATTGGGCTCGGCCGAAAAGCCCAATCCTTGTCTTCATCCTTGAGTTGAGTAAAACTTGGCGCTTGCAAAGAAAGGCCGTCAATGGAACCCGCCGAGTAAAACCGGAGCTCCTTCTTTGGCTCTGCGGATTCGACAAAGACACTTTCAGACTGGTTTTAGAGCAAGAAACAGAGGCTCGTGACTCTGGGACTTCAGAATTCTTCATAAAGAGTTATCTCCTTTTCTTAAATTCCCCGTTTCTTTTTCCTTTTTCTCCCCTTTATTTCGTCTGTTAA

Coding sequence (CDS)

ATGCAAAGAGCCGTTCAAATGGACAACGAACTAATCAAAATAACAAATCCAACAAAGATCATGCCCAAAATGCTAAAGGATTGGGCTCGGCCGAAAAGCCCAATCCTTGTCTTCATCCTTGAGTTGAGTAAAACTTGGCGCTTGCAAAGAAAGGCCGTCAATGGAACCCGCCGAGTAAAACCGGAGCTCCTTCTTTGGCTCTGCGGATTCGACAAAGACACTTTCAGACTGGTTTTAGAGCAAGAAACAGAGGCTCGTGACTCTGGGACTTCAGAATTCTTCATAAAGAGTTATCTCCTTTTCTTAAATTCCCCGTTTCTTTTTCCTTTTTCTCCCCTTTATTTCGTCTGTTAA

Protein sequence

MQRAVQMDNELIKITNPTKIMPKMLKDWARPKSPILVFILELSKTWRLQRKAVNGTRRVKPELLLWLCGFDKDTFRLVLEQETEARDSGTSEFFIKSYLLFLNSPFLFPFSPLYFVC
Homology
The following BLAST results are available for this feature:
BLAST of Clc03G03700.2 vs.
Match NameE-valueIdentityDescription
BLAST of Clc03G03700.2 vs.
Match NameE-valueIdentityDescription
BLAST of Clc03G03700.2 vs.
Match NameE-valueIdentityDescription
BLAST of Clc03G03700.2 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Clc03G03700Clc03G03700gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Clc03G03700.2-exonClc03G03700.2-exon-ClcChr03:3699739..3699800exon
Clc03G03700.2-exonClc03G03700.2-exon-ClcChr03:3700576..3700867exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Clc03G03700.2-cdsClc03G03700.2-cds-ClcChr03:3699739..3699800CDS
Clc03G03700.2-cdsClc03G03700.2-cds-ClcChr03:3700576..3700867CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Clc03G03700.2Clc03G03700.2-proteinpolypeptide