Cla97C11G221440.1 (mRNA) Watermelon (97103) v2.5

Overview


Name	Cla97C11G221440.1
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Unknown protein
Location	Cla97Chr11: 27433985 .. 27435120 (-)
Sequence length	345
RNA-Seq Expression	Cla97C11G221440.1
Synteny	Cla97C11G221440.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATTCAAGGATTCAAGGAATACCCATAAGGTAAAATTCTCCAACCACAAATACCCTCCAATTTTTTCCTCTCCTGTTCGCCTACAAAATTTGTTGGCGTTCCTAAGATCAGTCGCCTTCCAGTAATGAGATTCAAATTGCTTAATTGTTGCCTTTGACTATTGGTTGGTTGCATTAGTTTTGAATCTGTAACTGCCTATTATTGATTAGATTTATATTCGTCGGTTCGATCTCTAACTTAGGTTGTTCTTGATTGCAATCATAATGAGAGATTGGATTCTGGGATTGAAGTGCTTTTGGTTAGTTCTAGTTGGTTTGGTAATTTTCACGAGTGAGGAAGAGGAATTGATTGGAGGCGTGTGCATGATTTATTTGTCTCTCTCTTTTTTCTTTCTTTTTTGCCCTAGAAAGATGCTTGTTGGGCGTGATTAAAGAATGGGTCTATTTGGTTTAATGGCGGCTCCCTTGATCTGGAGCGATTTACTGGATTTTCAGTCGAACTGTCTTGCACTGTTTTCTGGTACCATGAATACCTAATTGGTTTGACAAGGGGACGTCGTTGTTCTGTTTTACCAATTGAGCGTCTTGGTCGAGTTAAATCCTGCCCCTTAGCTTGCTCCATGTTTACTTGGTCTTTGTCGCGGTGAGTCTGGTAACGTTAGTGGTTGTCGTTTGTAACCTTTTTTTGGAGTTCTGAATCACGTGCGATTTAACAATCTGGATGGTGTTGTATGCAGTGTCGCAAGTTGTGCATTCTACCTAAAGTTCTACATTTAACTTGAACAAATTTTGTCGTTCATACATTATTTGATGTTTTAATATCACTTCTCGTATAGGTTATTCCCTTTTGAAGAGTTGATTTGTTTACATTGAGCCCATAGGATTCCTAGAATGTCGAACCATGATGATTAAAACTTGGAACTTCTTTGCCACATTGGTTGTCCTTATCTGTTAATCTTTTGCACATATTATCCTTTCCATCTTATAGTGTATTGGTGATTCTGTCTTTTGTATTTATGCTATATAATTGTATTTCATTCATGTGTGGACTTGCAGTTGAGGTTCAAGGTTTACTGGAGTCTGATCCTTTTCAAATTCCTCATTGGAGATAACTGTATCAATAGGGACTGTTAA

mRNA sequence

ATGCATTCAAGGATTCAAGGAATACCCATAAGGTTGTTCTTGATTGCAATCATAATGAGAGATTGGATTCTGGGATTGAAGTGCTTTTGGTTAGTTCTAGTTGGTTTGAATGGGTCTATTTGGTTTAATGGCGGCTCCCTTGATCTGGAGCGATTTACTGGATTTTCAGTCGAACTGTCTTGCACTGTTTTCTGGTACCATGAATACCTAATTGGTTTGACAAGGGGACGTCGTTGTTCTGTTTTACCAATTGAGCGTCTTGGTCGATTGAGGTTCAAGGTTTACTGGAGTCTGATCCTTTTCAAATTCCTCATTGGAGATAACTGTATCAATAGGGACTGTTAA

Coding sequence (CDS)

ATGCATTCAAGGATTCAAGGAATACCCATAAGGTTGTTCTTGATTGCAATCATAATGAGAGATTGGATTCTGGGATTGAAGTGCTTTTGGTTAGTTCTAGTTGGTTTGAATGGGTCTATTTGGTTTAATGGCGGCTCCCTTGATCTGGAGCGATTTACTGGATTTTCAGTCGAACTGTCTTGCACTGTTTTCTGGTACCATGAATACCTAATTGGTTTGACAAGGGGACGTCGTTGTTCTGTTTTACCAATTGAGCGTCTTGGTCGATTGAGGTTCAAGGTTTACTGGAGTCTGATCCTTTTCAAATTCCTCATTGGAGATAACTGTATCAATAGGGACTGTTAA

Protein sequence

MHSRIQGIPIRLFLIAIIMRDWILGLKCFWLVLVGLNGSIWFNGGSLDLERFTGFSVELSCTVFWYHEYLIGLTRGRRCSVLPIERLGRLRFKVYWSLILFKFLIGDNCINRDC

Homology

The following BLAST results are available for this feature:

BLAST of Cla97C11G221440.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cla97C11G221440.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cla97C11G221440.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cla97C11G221440.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla97C11G221440	Cla97C11G221440	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C11G221440.1-exon	Cla97C11G221440.1-exon-Cla97Chr11:27433985..27434062	exon
Cla97C11G221440.1-exon	Cla97C11G221440.1-exon-Cla97Chr11:27434526..27434684	exon
Cla97C11G221440.1-exon	Cla97C11G221440.1-exon-Cla97Chr11:27434801..27434876	exon
Cla97C11G221440.1-exon	Cla97C11G221440.1-exon-Cla97Chr11:27435089..27435120	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C11G221440.1-cds	Cla97C11G221440.1-cds-Cla97Chr11:27433985..27434062	CDS
Cla97C11G221440.1-cds	Cla97C11G221440.1-cds-Cla97Chr11:27434526..27434684	CDS
Cla97C11G221440.1-cds	Cla97C11G221440.1-cds-Cla97Chr11:27434801..27434876	CDS
Cla97C11G221440.1-cds	Cla97C11G221440.1-cds-Cla97Chr11:27435089..27435120	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla97C11G221440.1	Cla97C11G221440.1-protein	polypeptide