Cla97C11G216780.2 (mRNA) Watermelon (97103) v2.5

Overview


Name	Cla97C11G216780.2
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Unknown protein
Location	Cla97Chr11: 19399053 .. 19402986 (-)
Sequence length	351
RNA-Seq Expression	Cla97C11G216780.2
Synteny	Cla97C11G216780.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCCATATGAGGCACCTCCTCGGCACTGGTTACCAACCAGTGGTAACTGATGGAGTTAGAAAACATGCAGCTAAAGAAAAAAGGATGCAAAGCACTCTAATTACATCAATTTAAAAGAAAAACATGCTTAGATAAACTGAGATACAAAGGAAGTAACACTTACTCGTTGTAGCTCAAAATTTGTTCCCAACAATCTCCAAAATCTAATCATGAACTGTTCATGGACCACCACTAGAGTTTCCTTGTTATTCTCAGGCCTTAGAACGGATGGTGGGAACCGAATTGAGCAAAAAAAATGGAGCATAAAAGTGCAAAACACTGTTTCGGTGGAGAGGAAACTCGCTTACCCGTAAAAATTTTTTTCTTAAAAAACCAAAAAACCTTTTCTTCAGCTTTTCTTCTCCTTATTTTAGAGAGGAAACCATGCAATTCAAAATTACATGCTGAAAGACACCACCACTGATGATTCAGGTGCTTGAAATTAATGTAAATTGCATGTGAAGGAGAGGTCCCCACCTCCTCTTCCACCATGCAACCAAAAGTGGTGAGATTTCCCACAAACTCAATTCTCTATTGAGAATTGAGAAATTAATTTTGATTTCATAAATCAAAGTTTCAGTTTAATATAATTAATTAACCAATTAATTAATTATATTAAATTAATATTTTTCCATTTTCCGACAATTTTCAAACTCAATTAATCTCTATTCAACAGTATAATATTTAAATCACATTTAAATATTATTAAAGTCTCAATTCGTCTAATTCACAATTAAACGAATCAAACCGTAAAATACACATTTTTCTAAATTTGAACACTTCAAATTGTCTCAATATACTGTTCTAAGGTTTAGTCCACGAGCTAACAAGGGGACCTAATGGACCTACAGATCATGAGCTCCAACGATTTGAAATTAACCTGCTAAACTCTTTAACCTAGTTAATTAACATTTGTTAACTACCGGGTCACTCCACTAAAGCCCAATAGCTGCATTCTCCTCAAGTAGATATATTTTTGTCCATTTGATATAACCATAATTAGTAAATCAATCCTTCACAAGTTGTTCGTAATTACAGTTGGGTCAAAAGACCGTTTTACCCTTGTGATTACTTCTTGTTCCTTAAGTCCCATTGATCCTCTAATGAACAATTGGTTTGTGGTCCAACCAACAAACCAATAAGAGGGTGGGGCCCTTTGCTCAAGACCTGGATTCAGTAGTTAAGAGAACAACTTATCTACTATTCTTTAATAAGGTAGGAGTGAATTTCATCTTGCAAGATTATATCCCCAACTATCTGCCTAATCTTATCCCTAAAATGGGGGGTATATTGAGTCGATCAACTGGCCACTCTCACCCATGAAGATTAAAGAATAATCTCAAACAAACAAGAGTTCATAGTTAGCTCAGGATTAAGATCGAGTTACTTAAGTCATCAGGTTGAAATAATCAGTTTTAACAGTAAATGATGTTATAAAGTAAACGTGATTATTTCTTAGTCTAGTCTTATGTAAACTCATTGCATAGGATGCCCCCACTTACATGTCTCTACATGAACGATTTAGGATCACATCATTTGTATCAATACAAAGTGGGTCGTATCTATAACGTCCCCAAGATAAGGTACCCAGCCTTTATCCAATATACTATAGACCATTTTGGCTATTACTTAAACTTGATCCACTTTTATCATATAAAGTCTAAGTATTCACCATATAACCATGGGTTCTTAGTTTATTGGATTTAAATGCAATTCACATATTCAATAACAACTTTACTGAAACCTCGATAACAACTTTATTGAGAATAAAATCCATAAATTACAAACAACGAGTTTTAGGACATAAAACCCAACAGTAACTATGTTTAATGCCTGCACAAGTTGTCACTTGATATAACCATAATAAGTAGGTCGATCCTTCACAAGTTGTTTGTAATTATAGCTGGGTCAAAATTATTGTTTTACCCCTGTAATTACATCTCATTCCTTAAGTCCCACTAATCCTCTAATGAATAATTGGTTTGTGGTCCGACCACAAAACCTAATCCCTCTCGGGCCAATGAGAGGGTGGGGCCGCTTATTGAAGACCCGAAGTAAGCACTTAAGGGAACAACTTCTCTACTATCCTTAAATAAGGTAGGAGTGAATTCTATTTTGTAGGACTATGTCCCTAGTTATCTGCCTGATCTTATCCCTAAAATAAGAGGCTTATTGAGTCGGCGAAACTGGCCACTCTCACCCATGCAAATTAAAGAATAATCTCAAACAAATAGGAGTTCATAGTTAGCTCAAGATTAAGATCGAGTTACCTAGGTCCATCAGGTTGAAATAATCAATTTTAATAATAAACGGTATTATAAAGTAAAAGTGATTATTTCATGGTTTGGTCTTATGCAAACTCTTTGCATAGGACACCCTCACTTACATGTCTCCACATGAACGATTTAGTATCACATCATTTTTATCAAAATACAAAGTGGACCGCATCCATAGTGTTCCCAAAATAAGGTACCCAACCTTTATTCATATACTAAAGACCGTTTTTGCTATCACCTATAATACTTGATCCACTTTTATGTCACAACATAAAGTATAAGTATTCACTAAATAGCCATAAGTTCTTAGTTTATTGTATTTAATAAATGCAATTCATATATTCAATAATAATTTTACTGAATAAATCTCGATAACAACTTTGTTGAGAATAAGTTCCAAAAATTATAAACTACGAGTTTTATGACATAAAACCCAACATCGAAAAGTCAAACATAGTTCATCTAAAATAAATTGGAGGCTATTACAAACTTTTCACTATGTAGGACTCACTTCTTAAAATTTGAAAAGTTGGAAAAAAGTTAGAAAAAATGTTTTTAAAAATGGGTTAGTTTAGTCCAATTAAAAATTTTTTGGATTAGAAATAATCATTTGCCTCGCAAGAAGATGGAACATTAGAAAGAAGTAGTGGCATATTGGTAATATATAGAGAAGATGTAGGTGAATGTATAACTCTCTCTAAAGGCAGAAGAGAGAGAGAAAGAGAGAGAGATCTGAGACTGAGTTAGGGGACGAATCGCTTTGCGCTCCAAAACGTAGCAGTACTTGTTAACATAAATGGCGAAGAAGATCCGAACCCTTGGATTCTCTCTCTCAGATCCAGATCGTCCGATTCATTCCCTCTCTCTGGTTCGTTTCGTTTACCCATGAGCTCCCAGAGCTCAACCCAATGAAGAGGAGAGAGATACACACACAATCACACTGACCAAACTCACACCCACCCACCTCCAATTTCCCGATTTTCTTGCGGTCTGTTTTCTTCACTTTTCTCCTTTCTTTCCTACGATTATTGGGTTTCTTTCTTTCTTTGATTCATTGCTCAGGAACTCGATGTGCAAAGATTGGGCAACTTTTTTGCTCTCTTTTCTGTTCTTCTCTTGCTTTTTGGTTGGGTGATTTTGATTGGAACTTACTGTTGGTGCCAATTTGGTTGTTGTTCTGTTGAGTTTTTAGTTGGTTGAGGGTTTTGGATTCCTGTTTTTTTTTTTAAAATGAATTGTTTGTCGATGGAATTGAAGTTGCTATTGTCTTTTTCATCAAACGAATGGGAGTTTCTGGCTTGGGATTTCGTTGATTGGGATTTTCAAGCTCTATGTTTACTCTAATAAATGGGTTTTATTTCTTTTTATTGTTTCTTTTGCAGATTTGTGGTTTGTGATTGCTTCACTGTGTGGCAGTAGGCAGCAGAGTTTGAGATCAGGCTGTTTGTGTGGTGTCTGTCAGTTCAGTTAGCTGCTAAAAATGGAGAGATTTGAGCACGACGAAGTTATGTGAGTAATCTGATTTGAGGTTTTTTCTTTCTGTTGTCTAGCTTCTGGCAGGGGCGATTCTCAAAGAGCCTGTTGCTGGAAAATGCCTAATGTCTGCTGGTTTTTGA

mRNA sequence

ATGCTCCATATGAGGCACCTCCTCGGCACTGGTTACCAACCAGTGAGAGGAAACCATGCAATTCAAAATTACATGCTGAAAGACACCACCACTGATGATTCAGGATCACATCATTTGTATCAATACAAAGTGGGTCGTATCTATAACGTCCCCAAGATAAGAGGAGAGAGATACACACACAATCACACTGACCAAACTCACACCCACCCACCTCCAATTTCCCGATTTTCTTGCGATTTGTGGTTTGTGATTGCTTCACTGTGTGGCAGTAGGCAGCAGAGTTTGAGATCAGGCTGGGCGATTCTCAAAGAGCCTGTTGCTGGAAAATGCCTAATGTCTGCTGGTTTTTGA

Coding sequence (CDS)

ATGCTCCATATGAGGCACCTCCTCGGCACTGGTTACCAACCAGTGAGAGGAAACCATGCAATTCAAAATTACATGCTGAAAGACACCACCACTGATGATTCAGGATCACATCATTTGTATCAATACAAAGTGGGTCGTATCTATAACGTCCCCAAGATAAGAGGAGAGAGATACACACACAATCACACTGACCAAACTCACACCCACCCACCTCCAATTTCCCGATTTTCTTGCGATTTGTGGTTTGTGATTGCTTCACTGTGTGGCAGTAGGCAGCAGAGTTTGAGATCAGGCTGGGCGATTCTCAAAGAGCCTGTTGCTGGAAAATGCCTAATGTCTGCTGGTTTTTGA

Protein sequence

MLHMRHLLGTGYQPVRGNHAIQNYMLKDTTTDDSGSHHLYQYKVGRIYNVPKIRGERYTHNHTDQTHTHPPPISRFSCDLWFVIASLCGSRQQSLRSGWAILKEPVAGKCLMSAGF

Homology

The following BLAST results are available for this feature:

BLAST of Cla97C11G216780.2 vs.


Match Name	E-value	Identity	Description

BLAST of Cla97C11G216780.2 vs.


Match Name	E-value	Identity	Description

BLAST of Cla97C11G216780.2 vs.


Match Name	E-value	Identity	Description

BLAST of Cla97C11G216780.2 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla97C11G216780	Cla97C11G216780	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C11G216780.2-exon	Cla97C11G216780.2-exon-Cla97Chr11:19399053..19399108	exon
Cla97C11G216780.2-exon	Cla97C11G216780.2-exon-Cla97Chr11:19399227..19399286	exon
Cla97C11G216780.2-exon	Cla97C11G216780.2-exon-Cla97Chr11:19399681..19399754	exon
Cla97C11G216780.2-exon	Cla97C11G216780.2-exon-Cla97Chr11:19401362..19401419	exon
Cla97C11G216780.2-exon	Cla97C11G216780.2-exon-Cla97Chr11:19402513..19402570	exon
Cla97C11G216780.2-exon	Cla97C11G216780.2-exon-Cla97Chr11:19402942..19402986	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C11G216780.2-cds	Cla97C11G216780.2-cds-Cla97Chr11:19399053..19399108	CDS
Cla97C11G216780.2-cds	Cla97C11G216780.2-cds-Cla97Chr11:19399227..19399286	CDS
Cla97C11G216780.2-cds	Cla97C11G216780.2-cds-Cla97Chr11:19399681..19399754	CDS
Cla97C11G216780.2-cds	Cla97C11G216780.2-cds-Cla97Chr11:19401362..19401419	CDS
Cla97C11G216780.2-cds	Cla97C11G216780.2-cds-Cla97Chr11:19402513..19402570	CDS
Cla97C11G216780.2-cds	Cla97C11G216780.2-cds-Cla97Chr11:19402942..19402986	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla97C11G216780.2	Cla97C11G216780.2-protein	polypeptide