Cla97C11G214580.2 (mRNA) Watermelon (97103) v2.5

Overview


Name	Cla97C11G214580.2
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Protein of unknown function (DUF 3339)
Location	Cla97Chr11: 7968221 .. 7969543 (+)
Sequence length	399
RNA-Seq Expression	Cla97C11G214580.2
Synteny	Cla97C11G214580.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAAATGGGAGACTCGATTACAAACTAGTGGGAACGCAAAGTGAGATGGAAACCAAGGAATGGAAAACAGTAGGAAGTGAAACTGGTAGGAATGAAAGGTGGGATGGATACAAACCATTCCCTACTTACAAGCAAACCAAACGTGGGCTTTCAAACCCAAACCCTTCCAAACCCAACCCATTTCCACTCCCCAAACAACCCCTAAAAACATCGGAGGAAAGGAAGGTTGGGTTTACCACCAACATTTAAAGTTGACGAACCAAACTCAATCCAACTCATGTTAGTGAGTCAAACACCTCCGTGTATAACAACATTTTTAAAGAATTGTAAATATAACAAAATCTATTAGTGATAAACTCTATCACTGATAGACTTCTATCACTTTTAAACTCCTATCAATGATATACTTTATCACCGATAGATTTAGAGAGCTGAATCTAAATTTTGCTTTATCTACAAAAAAATTTTACACTCTACTATATCTACTAATACTTTTGGTGTAATTGTTACTATATTTTCTGCTCCTAAGAACTAAATAATACCTCGATATCTTTAGTACACAAAGCATAAAATAAATTGCATTTGTCGATCTCCATGTAAATATAAATACTAATATCAAGATGAATAGATTAGTTTGAAAATAAAAAATAATGTATTTTAAGTAAAACACAATTGGGAAGATGAGAGATGAATCACGTTTAAGAAATAGAATATATTTGAAAGAAGTAAGTTCACTCTAATCAAGACTAAAAATAACTGAATTATCGACTTAAATAATTTTTATATTTAGAAAAATATTTATGAATTAACTATTTTTATGGATATAACCATATATGACAAAGGTGAAAGCTGAATTCAAAAGCAAACAAACTCCATGAGAAAATTTGGAGTGGTCTGAGGCTGAGTCTAAACCGCCGTGCCGGCGGCCTGAAAGAGACAACCCCCATCACTCTCAACGGAGCTCGTGAGTATCGAAGCGGCAGTAAGTAATTGTCATTTGGTTTAGCAGATAACCCGAAACGGCCAAGAATTCCCATTTCATATTTATTTATACATAAACCTCTCGATTCCAAATCCCCATTAACATCAAATCAAAGCTGGGTTTGGAAAATGGGGGATTGGGGGCCTGTTCTAATAGCTGTAATACTGTTCGTAGTTCTGAGCCCCGGAGTTCTGTTTCAGCTGCCCGGCAAAAACAGAGTTGTGGAGTTCGTCAATCTGCAAACCAGCGCCATCTCCGTTTTCGTCCACGCCATCATCTACTTTGGCCTCATTACTATCTTTGTCATCGCCATTGGGGTTCACATTTCCAGTGGCTAA

mRNA sequence

ATGAGAAATGGGAGACTCGATTACAAACTAGTGGGAACGCAAAGTGAGATGGAAACCAAGGAATGGAAAACAGTAGGAAGTGAAACTGATAACCCGAAACGGCCAAGAATTCCCATTTCATATTTATTTATACATAAACCTCTCGATTCCAAATCCCCATTAACATCAAATCAAAGCTGGGTTTGGAAAATGGGGGATTGGGGGCCTGTTCTAATAGCTGTAATACTGTTCGTAGTTCTGAGCCCCGGAGTTCTGTTTCAGCTGCCCGGCAAAAACAGAGTTGTGGAGTTCGTCAATCTGCAAACCAGCGCCATCTCCGTTTTCGTCCACGCCATCATCTACTTTGGCCTCATTACTATCTTTGTCATCGCCATTGGGGTTCACATTTCCAGTGGCTAA

Coding sequence (CDS)

ATGAGAAATGGGAGACTCGATTACAAACTAGTGGGAACGCAAAGTGAGATGGAAACCAAGGAATGGAAAACAGTAGGAAGTGAAACTGATAACCCGAAACGGCCAAGAATTCCCATTTCATATTTATTTATACATAAACCTCTCGATTCCAAATCCCCATTAACATCAAATCAAAGCTGGGTTTGGAAAATGGGGGATTGGGGGCCTGTTCTAATAGCTGTAATACTGTTCGTAGTTCTGAGCCCCGGAGTTCTGTTTCAGCTGCCCGGCAAAAACAGAGTTGTGGAGTTCGTCAATCTGCAAACCAGCGCCATCTCCGTTTTCGTCCACGCCATCATCTACTTTGGCCTCATTACTATCTTTGTCATCGCCATTGGGGTTCACATTTCCAGTGGCTAA

Protein sequence

MRNGRLDYKLVGTQSEMETKEWKTVGSETDNPKRPRIPISYLFIHKPLDSKSPLTSNQSWVWKMGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVIAIGVHISSG

Homology

[Close]

BLAST of Cla97C11G214580.2 vs. NCBI nr
Match: XP_008441320.1 (PREDICTED: uncharacterized protein LOC103485470 [Cucumis melo])

HSP 1 Score: 122.1 bits (305), Expect = 3.6e-24
Identity = 63/69 (91.30%), Postives = 68/69 (98.55%), Query Frame = 0


Query: 64  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVI 123
           MGDWGPVLIAVILFVVLSPGVLFQLPG +RVV+FVN+QTSAISVFVH+II+FGLITIFVI
Sbjct: 1   MGDWGPVLIAVILFVVLSPGVLFQLPGNDRVVQFVNMQTSAISVFVHSIIFFGLITIFVI 60

Query: 124 AIGVHISSG 133
           AIGVHISSG
Sbjct: 61  AIGVHISSG 69

[Close]

BLAST of Cla97C11G214580.2 vs. NCBI nr
Match: XP_038886424.1 (uncharacterized protein LOC120076617 [Benincasa hispida])

HSP 1 Score: 117.9 bits (294), Expect = 6.8e-23
Identity = 59/69 (85.51%), Postives = 66/69 (95.65%), Query Frame = 0


Query: 64  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVI 123
           MGDWGPV+IAV+LFV+LSPGVLFQLPG NRVV+F+N+QTSAISVFVH II+FGLITIFVI
Sbjct: 1   MGDWGPVVIAVVLFVILSPGVLFQLPGNNRVVQFLNMQTSAISVFVHTIIFFGLITIFVI 60

Query: 124 AIGVHISSG 133
           AI VHISSG
Sbjct: 61  AIDVHISSG 69

[Close]

BLAST of Cla97C11G214580.2 vs. NCBI nr
Match: XP_022134280.1 (uncharacterized protein LOC111006581 [Momordica charantia])

HSP 1 Score: 116.7 bits (291), Expect = 1.5e-22
Identity = 59/69 (85.51%), Postives = 66/69 (95.65%), Query Frame = 0


Query: 64  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVI 123
           M DWGPVLIAV+LFVVLSPGVLFQLPGK RVVEFVNL+TSAISVFVH +I+FGLITIF+I
Sbjct: 1   MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVVEFVNLKTSAISVFVHTLIFFGLITIFLI 60

Query: 124 AIGVHISSG 133
           AIGVHI++G
Sbjct: 61  AIGVHITTG 69

[Close]

BLAST of Cla97C11G214580.2 vs. NCBI nr
Match: XP_011649952.1 (uncharacterized protein LOC101212375 [Cucumis sativus] >KGN63158.1 hypothetical protein Csa_022526 [Cucumis sativus])

HSP 1 Score: 115.2 bits (287), Expect = 4.4e-22
Identity = 59/69 (85.51%), Postives = 65/69 (94.20%), Query Frame = 0


Query: 64  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVI 123
           MGDW PVLIAVILFVVLSPGVLFQLPG +RVV+F+N+QTSAISVFVH+I +FGLITIFVI
Sbjct: 1   MGDWAPVLIAVILFVVLSPGVLFQLPGNDRVVQFINMQTSAISVFVHSIFFFGLITIFVI 60

Query: 124 AIGVHISSG 133
           AI VHISSG
Sbjct: 61  AIDVHISSG 69

[Close]

BLAST of Cla97C11G214580.2 vs. NCBI nr
Match: XP_037491426.1 (uncharacterized protein LOC105632430 [Jatropha curcas])

HSP 1 Score: 113.2 bits (282), Expect = 1.7e-21
Identity = 56/69 (81.16%), Postives = 65/69 (94.20%), Query Frame = 0


Query: 64  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVI 123
           M DWGPV+IAV+LFVVLSPGVLFQLPGK+RVVEFVN+QTS +SV VH II+FGLITIF+I
Sbjct: 1   MADWGPVVIAVVLFVVLSPGVLFQLPGKSRVVEFVNMQTSGVSVLVHTIIFFGLITIFLI 60

Query: 124 AIGVHISSG 133
           AIGVHI++G
Sbjct: 61  AIGVHITTG 69

[Close]

BLAST of Cla97C11G214580.2 vs. ExPASy TrEMBL
Match: A0A1S3B351 (uncharacterized protein LOC103485470 OS=Cucumis melo OX=3656 GN=LOC103485470 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.8e-24
Identity = 63/69 (91.30%), Postives = 68/69 (98.55%), Query Frame = 0


Query: 64  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVI 123
           MGDWGPVLIAVILFVVLSPGVLFQLPG +RVV+FVN+QTSAISVFVH+II+FGLITIFVI
Sbjct: 1   MGDWGPVLIAVILFVVLSPGVLFQLPGNDRVVQFVNMQTSAISVFVHSIIFFGLITIFVI 60

Query: 124 AIGVHISSG 133
           AIGVHISSG
Sbjct: 61  AIGVHISSG 69

[Close]

BLAST of Cla97C11G214580.2 vs. ExPASy TrEMBL
Match: A0A6J1BXW3 (uncharacterized protein LOC111006581 OS=Momordica charantia OX=3673 GN=LOC111006581 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 7.4e-23
Identity = 59/69 (85.51%), Postives = 66/69 (95.65%), Query Frame = 0


Query: 64  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVI 123
           M DWGPVLIAV+LFVVLSPGVLFQLPGK RVVEFVNL+TSAISVFVH +I+FGLITIF+I
Sbjct: 1   MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVVEFVNLKTSAISVFVHTLIFFGLITIFLI 60

Query: 124 AIGVHISSG 133
           AIGVHI++G
Sbjct: 61  AIGVHITTG 69

[Close]

BLAST of Cla97C11G214580.2 vs. ExPASy TrEMBL
Match: A0A0A0LMX4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G406080 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 2.1e-22
Identity = 59/69 (85.51%), Postives = 65/69 (94.20%), Query Frame = 0


Query: 64  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVI 123
           MGDW PVLIAVILFVVLSPGVLFQLPG +RVV+F+N+QTSAISVFVH+I +FGLITIFVI
Sbjct: 1   MGDWAPVLIAVILFVVLSPGVLFQLPGNDRVVQFINMQTSAISVFVHSIFFFGLITIFVI 60

Query: 124 AIGVHISSG 133
           AI VHISSG
Sbjct: 61  AIDVHISSG 69

[Close]

BLAST of Cla97C11G214580.2 vs. ExPASy TrEMBL
Match: B9RBG4 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1676560 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 1.1e-21
Identity = 56/69 (81.16%), Postives = 64/69 (92.75%), Query Frame = 0


Query: 64  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVI 123
           M DWGPV+IAV+LFVVLSPGVLFQLPG +RVVEF NLQTS +SVFVH II+FGLITIF+I
Sbjct: 1   MADWGPVVIAVVLFVVLSPGVLFQLPGNSRVVEFANLQTSGVSVFVHTIIFFGLITIFLI 60

Query: 124 AIGVHISSG 133
           AIGVHI++G
Sbjct: 61  AIGVHITTG 69

[Close]

BLAST of Cla97C11G214580.2 vs. ExPASy TrEMBL
Match: A0A2C9U7J2 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G102200 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 3.1e-21
Identity = 54/69 (78.26%), Postives = 63/69 (91.30%), Query Frame = 0


Query: 64  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVI 123
           M DWGPV++AV+LFVVLSPGVLFQLPGK RVVEF N+QTS  SVFVH II+FGLITIF+I
Sbjct: 1   MADWGPVVVAVVLFVVLSPGVLFQLPGKGRVVEFANMQTSGASVFVHTIIFFGLITIFLI 60

Query: 124 AIGVHISSG 133
           AIG+HI++G
Sbjct: 61  AIGIHITTG 69

[Close]

BLAST of Cla97C11G214580.2 vs. TAIR 10
Match: AT5G63500.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 101.7 bits (252), Expect = 4.7e-22
Identity = 53/69 (76.81%), Postives = 58/69 (84.06%), Query Frame = 0


Query: 64  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVI 123
           M DWGPVLIAVILFVVLSPG+LFQ+P   RVVEF N+QTS  S+ VHAII+FGLITIF I
Sbjct: 1   MADWGPVLIAVILFVVLSPGLLFQIPAGGRVVEFGNMQTSGASILVHAIIFFGLITIFTI 60

Query: 124 AIGVHISSG 133
           AI VHI SG
Sbjct: 61  AINVHIYSG 69

[Close]

BLAST of Cla97C11G214580.2 vs. TAIR 10
Match: AT3G48660.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 94.7 bits (234), Expect = 5.8e-20
Identity = 46/69 (66.67%), Postives = 58/69 (84.06%), Query Frame = 0


Query: 64  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVI 123
           M DWGPV++AVILFV+L+PG+LFQ+P + RVVEF N+QTS  S+ VH II+FGLITIF I
Sbjct: 1   MADWGPVVVAVILFVLLTPGLLFQIPARGRVVEFGNMQTSGASILVHTIIFFGLITIFTI 60

Query: 124 AIGVHISSG 133
           AI +HI +G
Sbjct: 61  AIRLHIYTG 69

[Close]

BLAST of Cla97C11G214580.2 vs. TAIR 10
Match: AT5G08391.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 90.5 bits (223), Expect = 1.1e-18
Identity = 41/69 (59.42%), Postives = 57/69 (82.61%), Query Frame = 0


Query: 64  MGDWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVI 123
           M DWGPVL+ VILFV+L+PG+LFQLPG+ + VEF N QTSA+SV VH+++YF L+ +F++
Sbjct: 1   MSDWGPVLVTVILFVMLTPGLLFQLPGRQKYVEFGNFQTSAVSVIVHSLLYFSLVCVFLL 60

Query: 124 AIGVHISSG 133
           A+ +HI  G
Sbjct: 61  ALKIHIYIG 69

[Close]

BLAST of Cla97C11G214580.2 vs. TAIR 10
Match: AT5G40980.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 86.7 bits (213), Expect = 1.6e-17
Identity = 41/64 (64.06%), Postives = 54/64 (84.38%), Query Frame = 0


Query: 66  DWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVIAI 125
           DWGPV++AV LF++LSPG+LFQLP + RV+EF N+ TS IS+ VHAIIYF ++TI +IAI
Sbjct: 4   DWGPVIVAVALFILLSPGLLFQLPARTRVMEFGNMSTSGISILVHAIIYFCILTILIIAI 63

Query: 126 GVHI 130
            +HI
Sbjct: 64  QIHI 67

[Close]

BLAST of Cla97C11G214580.2 vs. TAIR 10
Match: AT3G01940.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 85.1 bits (209), Expect = 4.6e-17
Identity = 42/64 (65.62%), Postives = 53/64 (82.81%), Query Frame = 0


Query: 66  DWGPVLIAVILFVVLSPGVLFQLPGKNRVVEFVNLQTSAISVFVHAIIYFGLITIFVIAI 125
           DWGPV +AV+LFVVLSPG+LFQLP + RV+E  N+ TS IS+ VHAI++F +ITI VIAI
Sbjct: 5   DWGPVAVAVVLFVVLSPGLLFQLPARRRVLECGNMTTSGISILVHAILFFAIITILVIAI 64

Query: 126 GVHI 130
            +HI
Sbjct: 65  QIHI 68

The following BLAST results are available for this feature:

BLAST of Cla97C11G214580.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441320.1	3.6e-24	91.30	PREDICTED: uncharacterized protein LOC103485470 [Cucumis melo]	[more]
XP_038886424.1	6.8e-23	85.51	uncharacterized protein LOC120076617 [Benincasa hispida]	[more]
XP_022134280.1	1.5e-22	85.51	uncharacterized protein LOC111006581 [Momordica charantia]	[more]
XP_011649952.1	4.4e-22	85.51	uncharacterized protein LOC101212375 [Cucumis sativus] >KGN63158.1 hypothetical ...	[more]
XP_037491426.1	1.7e-21	81.16	uncharacterized protein LOC105632430 [Jatropha curcas]	[more]

BLAST of Cla97C11G214580.2 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cla97C11G214580.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B351	1.8e-24	91.30	uncharacterized protein LOC103485470 OS=Cucumis melo OX=3656 GN=LOC103485470 PE=...	[more]
A0A6J1BXW3	7.4e-23	85.51	uncharacterized protein LOC111006581 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A0A0LMX4	2.1e-22	85.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G406080 PE=4 SV=1	[more]
B9RBG4	1.1e-21	81.16	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1676560 PE=4 SV=1	[more]
A0A2C9U7J2	3.1e-21	78.26	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G102200 PE=4 SV=...	[more]

BLAST of Cla97C11G214580.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G63500.1	4.7e-22	76.81	Protein of unknown function (DUF 3339)	[more]
AT3G48660.1	5.8e-20	66.67	Protein of unknown function (DUF 3339)	[more]
AT5G08391.1	1.1e-18	59.42	Protein of unknown function (DUF 3339)	[more]
AT5G40980.1	1.6e-17	64.06	Protein of unknown function (DUF 3339)	[more]
AT3G01940.1	4.6e-17	65.63	Protein of unknown function (DUF 3339)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021775	Protein of unknown function DUF3339	PFAM	PF11820	DUF3339	coord: 64..129 e-value: 7.8E-33 score: 112.5
IPR021775	Protein of unknown function DUF3339	PANTHER	PTHR33128	OS05G0103400 PROTEIN	coord: 64..132
None	No IPR available	PANTHER	PTHR33128:SF69	SUBFAMILY NOT NAMED	coord: 64..132

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla97C11G214580	Cla97C11G214580	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C11G214580.2-exon	Cla97C11G214580.2-exon-Cla97Chr11:7968221..7968308	exon
Cla97C11G214580.2-exon	Cla97C11G214580.2-exon-Cla97Chr11:7969233..7969543	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C11G214580.2-cds	Cla97C11G214580.2-cds-Cla97Chr11:7968221..7968308	CDS
Cla97C11G214580.2-cds	Cla97C11G214580.2-cds-Cla97Chr11:7969233..7969543	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla97C11G214580.2	Cla97C11G214580.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane