Cla97C11G208190.1 (mRNA) Watermelon (97103) v2.5

Overview
NameCla97C11G208190.1
TypemRNA
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr11: 1887557 .. 1889749 (+)
Sequence length318
RNA-Seq ExpressionCla97C11G208190.1
SyntenyCla97C11G208190.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCTGCCTGTCGCAAACAGAGTACCGCGACAATTGGGTGTACAATAAACTTTCTTTAACTTGAACAACGACGCAGGTGATGTTTAAGAATTTAACCACGATGTACATTGCAGAAAAGCAAATGTTTATTTTTGTCTTGGATAGATGGCTTGCGATCATTTCTTATTGTGAGCGTGAATCCATCCGTTAGCAGCGTTGAGAGCAATAGTTTATGCGGTTCTGTATGGTAATTCTGCGAGATTCCATTGTGGTTCGTTGATCAGCAGAATGCCAGAGCTTGTAATTTTTGAACTTTTAGCTCATGTTCTTATGTTGTGTTCTTCATCTGCAGGCGTATCAAATTCAAAGGCTCTTATCAGTTAATAGATATCTAAAACAAATTCCTGTATCAGTTTCCCTGTTTTGTAGTTCGGTAGTTTGTTGTCTTGACCTCTTGAATTCCATCTTTTATTTTCTTTTTCTTTCACTTTTGATCAGAATAGTTCTTTGAGCTTGAGCTTGCTTTTGATGAATACCATAGTATGTCTCCTTGGGCTTTCTGCAAAAGAAAAATTGATTATTTGGTGATTTGTCCCATTGGCCTTTCATTTCTTTTACTTCACATAAAGATGATGGAGAGGCAATTAATTAGTTTAAGTAGTTTAATGTATTTAAAAGTACTTGTATTCTTTTTTAAATTGCAATTATGTACTTACCATTCATAAAAGTTGAATGGATCAAATATAAGGTATGGTAGTGTCCAAATTCTAGTTTCTCTTAGTAATGCTTTAAGCAATGCACTAATTTATTCCTCAGGTCCATTGGTTTCTATATATATTAATATTGAGATAAAAAAGGTAAAAACCATTATTGGCACTTTTAGTTCAAAACGATCAATATGTAGAATCGCGCGGGAACATACACTCTTAATTTAAAAGAGAGGGTTCGCTGACATTCAATAACGAAGCGGGCATATATATGAGATGAAACACACCCGAAGACAAGGCTGAATCCTATACATAAATCAGTTAATAAAAGAATAGAAAAAGCTTTTATTGTGTCGCTTAAGTTATATAGGTTATTTATGTAATGGTGGGTTTGGAATACTTTTTAAAGTGTTTAATTTAAAAAACAAGTCATTTTGGTAGAAATACAAGTGTGTTAAAAATCACAAGATTTGGGCTCCAATCTCCCTCTCCCTAATTGTACTAAAAAGAATATAAGTATTTGGTATAAAAAGAATACAAGTATTTGGTAACCACTCGAAATGAATTTTAAAAGCTAATAGTGATTTTATTTTAAACACCTCTTATCAAAAGTGTTTAAGATGAATTTTTTAAAAACATTTAGGCCCCTTTTGATAACCCTTTCGTTTGTAGTTTTTGTTTTTGAAAATTAAGCCTATGGATATTAATTTCATCTCCAAATTTCTTATTTTGTTATCTAGTTTTTACCGATGGTTTAAAAAACCAAGCTAAATTTTGAAAACTAGAAACAAGTAGCTTTTAAAAGTCTATTTTTGTTTTTGAAATTTGGCTAACAATCCAAACATTGTGGAGGAAATAGGCTAAATTTTTAAAAATTAAAACAAAACAAAAAAAAAAAAGATGGTTAGCAAATGGGATCTTAATTTTTAATAGCCCTTGAATCTAAAATTTTACCAATGAAATTTAGTATGTAATAACTTAGTCCATGTATTATAGATTTGTTACAAATTAAGTTTGGAGACTAAAGTGGATCAAAAGTGTTTTTAACAAGAAAGAATACTTTGATAACCTAGTTAATTGCTTAGGTCCTACATATTAACCAATAGGTTTTTTTTTTTAATTTGTTTTTAAAATATTGGTAAAAAGTAGATAAAAAAAAATTTAATGGTAAAAGAGATGTTTACAAGCTTAATTTTTTTTTTAAAAAAATTAAATAAAATTTAAATATGTCAAAACAAGTGTTAAATGACATGATCTTCCACCCTAAAAATAGAAGTCTTAAAATGAATGGTTTGTATTAAAAAAAAAAAAAATTAAAAATTATATTATATTTTAATTTATCTTGGTAGAAAGTTGGAGAATTGAGCAAAACATCTGACCCGAAGGAAGGCCACGTAAATGCATGCACATCACTGCTCACGAGTTGGAGGTTCAACTTTAAACCGGCGTCGTTTTGTATGTACTCCCCGCTCCCTCGATTTCTCGTTCCTAATTTTCTACGGTGA

mRNA sequence

ATGAGCTGCCTGTCGCAAACAGAGTACCGCGACAATTGGGCGTATCAAATTCAAAGGCTCTTATCAGTTAATAGATATCTAAAACAAATTCCTGTATCAGTTTCCCTGTTTTGTAGTTCGAATAGTTCTTTGAGCTTGAGCTTGCTTTTGATGAATACCATAAAAGTTGGAGAATTGAGCAAAACATCTGACCCGAAGGAAGGCCACGTAAATGCATGCACATCACTGCTCACGAGTTGGAGGTTCAACTTTAAACCGGCGTCGTTTTGTATGTACTCCCCGCTCCCTCGATTTCTCGTTCCTAATTTTCTACGGTGA

Coding sequence (CDS)

ATGAGCTGCCTGTCGCAAACAGAGTACCGCGACAATTGGGCGTATCAAATTCAAAGGCTCTTATCAGTTAATAGATATCTAAAACAAATTCCTGTATCAGTTTCCCTGTTTTGTAGTTCGAATAGTTCTTTGAGCTTGAGCTTGCTTTTGATGAATACCATAAAAGTTGGAGAATTGAGCAAAACATCTGACCCGAAGGAAGGCCACGTAAATGCATGCACATCACTGCTCACGAGTTGGAGGTTCAACTTTAAACCGGCGTCGTTTTGTATGTACTCCCCGCTCCCTCGATTTCTCGTTCCTAATTTTCTACGGTGA

Protein sequence

MSCLSQTEYRDNWAYQIQRLLSVNRYLKQIPVSVSLFCSSNSSLSLSLLLMNTIKVGELSKTSDPKEGHVNACTSLLTSWRFNFKPASFCMYSPLPRFLVPNFLR
Homology
The following BLAST results are available for this feature:
BLAST of Cla97C11G208190.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C11G208190.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C11G208190.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C11G208190.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cla97C11G208190Cla97C11G208190gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C11G208190.1-exonCla97C11G208190.1-exon-Cla97Chr11:1887557..1887595exon
Cla97C11G208190.1-exonCla97C11G208190.1-exon-Cla97Chr11:1887890..1887970exon
Cla97C11G208190.1-exonCla97C11G208190.1-exon-Cla97Chr11:1888036..1888077exon
Cla97C11G208190.1-exonCla97C11G208190.1-exon-Cla97Chr11:1889594..1889749exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C11G208190.1-cdsCla97C11G208190.1-cds-Cla97Chr11:1887557..1887595CDS
Cla97C11G208190.1-cdsCla97C11G208190.1-cds-Cla97Chr11:1887890..1887970CDS
Cla97C11G208190.1-cdsCla97C11G208190.1-cds-Cla97Chr11:1888036..1888077CDS
Cla97C11G208190.1-cdsCla97C11G208190.1-cds-Cla97Chr11:1889594..1889749CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cla97C11G208190.1Cla97C11G208190.1-proteinpolypeptide