Cla97C10G202450.1 (mRNA) Watermelon (97103) v2.5

Overview


Name	Cla97C10G202450.1
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Ribosome production factor 2 homolog
Location	Cla97Chr10: 32350555 .. 32354203 (+)
Sequence length	1185
RNA-Seq Expression	Cla97C10G202450.1
Synteny	Cla97C10G202450.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACGAATTGAGAGGTGGCGGCGTGGCGGGCGATAAGGAAAGGTTTAGGTGTTTATTCATTATTGGGTTGGGCCATGGATTTTCTTTAAATATGTATAAATCGATTTTAATTTTTGTTTTTTTATTTACCCTTCAAATAATTTCTTTCTTTCTATCTATTTCCTTTGTATTTTTATTTAGGGGCAATTCTAAATTTTCAATTAAATTTGCCAAAATATTTTTTAAAATGCACTTAATACGCAATATCAACAACATTAGGACATTTTTTAATTTCTATATTAGAGTGTTTGATTCGACAAGCACTATATTAATTGAATTGTGTTCATTTTAGCAATTAACAATTATATTAATCTTCAACTTTAATAGGTAAATCAAATTAAACTTTTCACTTCATATAACAAAAATAAAATCAATTTTTTTTAGCTATCTTCACGTTGATTTAGTTTAAAATTATCTCAAAATAGCTTAAATGAATTTGTGAAAATTGTATATTGTTGGTCTTCAAATTTTTAATTTCAAATCGATTTTGGGAGTGATAGAAAAAAAATCACAAAATCATTGTTTACAAAAACATGACCAAAATAGCAAAAAAGAAGAAGAAGAAGAGAAAAAAAAAAAAAAAAAAAAAAACAATTCCTATCCACCTATTTGTTCCTTGTTTCACTATTTTGGACAATTATCAATTTAGTTTTTTTTTCCCCTTAACATCCTATAAATTTTACACGAGGAATGGATGGGACGAGAGAAAGGGTGGGAGGAGGAGGGATATATAAGAGAGAATGGTGAAAAATAAACAGAATAATATTAAAATTTTTATTTAAAAACAATAGTAATAAATATGATTTGTCACATCAACCATTTAAAAAAATATATATTGTACTTTGTCCATATTCAAAATAATAATAAATTGTTCAATTAGCCATAAATTGTTCAAAATAGTAATGAAACGGTCACAAAGTTCCTTAAAAAATTGCACCTAGTTGAATATACTCTAATGAAACAAGACGAGATTATCTCAAATTTTAGACACTAAAATGTCAAATTTTAAAATTAAAGTCCAAATGTAATGTAAGTAAAGTCAAATATCAATAATTAGAAGTGTAATCTTTTATTATTATTATTTTTATTGTTATTTTATAGTAGAGTAGAAATATTGATGGACTATTTATTGAATGTCAAACTAACAAACAAGTCAAAATGTAACAAATAGACCAACAGTAATGTATCGCAAAATAAAGTTTTTTTTTAATTTGATAATTATAATATTTTAATTATTCTAAATCTTGATTCATAACTATAATTAAGTGAAAAAACTTAAATTTTAAAAGGATTAAATTATAACAAAATTATAATTCATTTTAAAATCCGGCTAAATGAAAAATAAACTCAAAATTTAAGTAATATTTTAATATTTAACAACAAATAAAAACTAAATCCACAAGAAAAGAAATTAGGGAAAAAATATATTTTTCGGATTACGTGGCTTCCCGAGCTTTGCCAAAAAGCCCCATTTGCACCCCAAAACCCTAACGTTAAAGACGCCCATTCCCCAAAAGCCCTCCAAAATCGGCGTCAGCTTGCAGTCGCCGGAAGTATCGATTTTTCTCTGCTACTTGAGCAACGAAACCCTAAATCTCATCTCCTTCATCCCGTCGCCGTGGATCATGTTGCAGGTTAGAACTCCCAAGAATCGAAAAGTTAAGCGAGAGCTCGAGAAACGTGCTCCTAAACTTGTAAGTTCTTCCAGTTCCCAGTTTGTATCTCTTCATCCGGGATATAGCTTCTGCTGGATGATTAAAAGCATGTGAAAGAAGTGTGTATAGGTTTTGGATTGTTGTTTTTCTTCTGTATTGTTGATGGATTTGGTTATCGATTTGGATATCGTAGGTCGAGACAGGGAAGAAGACGCTGATTCTTCATGGCACAAAAACAAGTGGCGTGTTGAATGCAGTACTGACGGAAATTTATCACCTGAAGAAAGAAAGTGCCGTGAAGTATTCTCGTAAGAATGATGGAATTAAACCATTTGAAAGTGGCGGCGATGCGTCTTTGGAATTTTTCTCTCTCAAAACTGATTGCAGTATTATCCTGGTGCGTATAATTGTGAATGCTCAATATTCTAAGCGTCTTAATTTATTTATTTGCTTAATTTCTTGAGCTCTGCAATGAGTACCTCTTTAAGGTTTGTATTTGACTTTACAATTTAGTTTTCCATTGGGAGGCAGTTTCTTTACTCTTCATCACAAGAATTAGTCATACAGTGCTTCGTTTAAGGCTTGATTCCTTTGGATGAGTACTTCTAGTTTTCTTTAAATGGGTTTTAGATGTCTCAAATGATCGAAGAACTTACCAGTCCTCAAACAGATGAACCTATGTAGAATTTAGAAAAGCATAATCATGATTCGCATTTTTCTTTTTTGAGTCAATAAGAACTTTGAGAACTTCAATTTAGGAGGGCACCCTATTTTGTTTATAGGAAAATCTCTGTTCTATTGGGTTCAAGTTTTATATATCTTTTCCTCTGTTATTATAAAATAGTAAACAGCTTCTTGCTTCTATGTCTACAGTTATTTATTGATGTAATTATTGCACCTCTTTTGCAGTATGGTTCTCACTCAAAGAAACGACCCAATAACCTTGTCATAGGGAGAACCTACAATCAGCATATCTATGACCTAGTTGAGGTTGGGATTGAAAATTTCAAGTCAATGCATTCTTTCACGTATGATAAGAAACTATCTCCACGGGTGGGGTCAAAGCCTTTCATTACTTTCATTGGGGAAGGATTTGAGAATGTGGAAGAGCTAAAGCATTTAAAGGAAGTCTTGCTTGATTTATTCCGGGGAGAGGTAAAAACCCTGTTGCTTTAGCTGGCTTAAGTGTAACTGTTTAGATATAAAAGATATCTATGGTTTTTGCAGGTCGTAGAGAATTTAAATCTTTCAGGATTGGACCGTGTATATGTATGTACAGCCATCTCACCGAATAAAGTATTTCTCACTCATTGTGCATTGCGATTGAAGAAGTCAGGTTCAGTAGTTCCAAGAATGGAACTAGTTGAAGTTGGTCCTTCAATGGATATGGTGGTTCGCAGGCACCGACTTCCTACTGATGGCCTAAGAAAAGAAGCCATGAAAACAGCTAAGGATCAGACTAAGAAGAAGGTTTAATGACTTTTTTTTTTTTTTAATGAAATGCACTTCATTTTTTCTATGAACCTGTTTGTCTAATTTTGATGTTTACTTCTCCCAGGAGAAAAATGTTAGCAAGGATCTTATTCAGGGCAAGATCGGAAGGATATATATTCCTGATCAAAAGGTGTGTGCACATCTCCCCCTCTTTCTGTATATCTGTTTTCTTGTTAGAGAATCGTGACTGTCACAATCTTGCTGATTGAACTCTTCTCTTGCCATGTTTTATCACCAAAGTAGCAACTTTATTATTTCACCTTGGTACAAATTTGTCACTCATTCGAATAACTTGATATACTCAATTTTGACTCATAGGTTGGAGAGATGGCTATACCCAACAAATCGAAGGGAGTGAAGAGAGAACGTCGTGAAGCAAAAATGAAAAATAGAGATGATGGGCCAGCCTCTAAAAAACCGAAGGAAGATTCTGAAAAACCAAAAGAGGATTTGGAATAG

mRNA sequence

ATGAACGAATTGAGAGGTGGCGGCGTGGCGGGCGATAAGGAAAGCTTTGCCAAAAAGCCCCATTTGCACCCCAAAACCCTAACGTTAAAGACGCCCATTCCCCAAAAGCCCTCCAAAATCGGCGTCAGCTTGCAGTCGCCGGAAGTATCGATTTTTCTCTGCTACTTGAGCAACGAAACCCTAAATCTCATCTCCTTCATCCCGTCGCCGTGGATCATGTTGCAGGTTAGAACTCCCAAGAATCGAAAAGTTAAGCGAGAGCTCGAGAAACGTGCTCCTAAACTTGTCGAGACAGGGAAGAAGACGCTGATTCTTCATGGCACAAAAACAAGTGGCGTGTTGAATGCAGTACTGACGGAAATTTATCACCTGAAGAAAGAAAGTGCCGTGAAGTATTCTCGTAAGAATGATGGAATTAAACCATTTGAAAGTGGCGGCGATGCGTCTTTGGAATTTTTCTCTCTCAAAACTGATTGCAGTATTATCCTGTATGGTTCTCACTCAAAGAAACGACCCAATAACCTTGTCATAGGGAGAACCTACAATCAGCATATCTATGACCTAGTTGAGGTTGGGATTGAAAATTTCAAGTCAATGCATTCTTTCACGTATGATAAGAAACTATCTCCACGGGTGGGGTCAAAGCCTTTCATTACTTTCATTGGGGAAGGATTTGAGAATGTGGAAGAGCTAAAGCATTTAAAGGAAGTCTTGCTTGATTTATTCCGGGGAGAGGTCGTAGAGAATTTAAATCTTTCAGGATTGGACCGTGTATATGTATGTACAGCCATCTCACCGAATAAAGTATTTCTCACTCATTGTGCATTGCGATTGAAGAAGTCAGGTTCAGTAGTTCCAAGAATGGAACTAGTTGAAGTTGGTCCTTCAATGGATATGGTGGTTCGCAGGCACCGACTTCCTACTGATGGCCTAAGAAAAGAAGCCATGAAAACAGCTAAGGATCAGACTAAGAAGAAGGAGAAAAATGTTAGCAAGGATCTTATTCAGGGCAAGATCGGAAGGATATATATTCCTGATCAAAAGGTTGGAGAGATGGCTATACCCAACAAATCGAAGGGAGTGAAGAGAGAACGTCGTGAAGCAAAAATGAAAAATAGAGATGATGGGCCAGCCTCTAAAAAACCGAAGGAAGATTCTGAAAAACCAAAAGAGGATTTGGAATAG

Coding sequence (CDS)

ATGAACGAATTGAGAGGTGGCGGCGTGGCGGGCGATAAGGAAAGCTTTGCCAAAAAGCCCCATTTGCACCCCAAAACCCTAACGTTAAAGACGCCCATTCCCCAAAAGCCCTCCAAAATCGGCGTCAGCTTGCAGTCGCCGGAAGTATCGATTTTTCTCTGCTACTTGAGCAACGAAACCCTAAATCTCATCTCCTTCATCCCGTCGCCGTGGATCATGTTGCAGGTTAGAACTCCCAAGAATCGAAAAGTTAAGCGAGAGCTCGAGAAACGTGCTCCTAAACTTGTCGAGACAGGGAAGAAGACGCTGATTCTTCATGGCACAAAAACAAGTGGCGTGTTGAATGCAGTACTGACGGAAATTTATCACCTGAAGAAAGAAAGTGCCGTGAAGTATTCTCGTAAGAATGATGGAATTAAACCATTTGAAAGTGGCGGCGATGCGTCTTTGGAATTTTTCTCTCTCAAAACTGATTGCAGTATTATCCTGTATGGTTCTCACTCAAAGAAACGACCCAATAACCTTGTCATAGGGAGAACCTACAATCAGCATATCTATGACCTAGTTGAGGTTGGGATTGAAAATTTCAAGTCAATGCATTCTTTCACGTATGATAAGAAACTATCTCCACGGGTGGGGTCAAAGCCTTTCATTACTTTCATTGGGGAAGGATTTGAGAATGTGGAAGAGCTAAAGCATTTAAAGGAAGTCTTGCTTGATTTATTCCGGGGAGAGGTCGTAGAGAATTTAAATCTTTCAGGATTGGACCGTGTATATGTATGTACAGCCATCTCACCGAATAAAGTATTTCTCACTCATTGTGCATTGCGATTGAAGAAGTCAGGTTCAGTAGTTCCAAGAATGGAACTAGTTGAAGTTGGTCCTTCAATGGATATGGTGGTTCGCAGGCACCGACTTCCTACTGATGGCCTAAGAAAAGAAGCCATGAAAACAGCTAAGGATCAGACTAAGAAGAAGGAGAAAAATGTTAGCAAGGATCTTATTCAGGGCAAGATCGGAAGGATATATATTCCTGATCAAAAGGTTGGAGAGATGGCTATACCCAACAAATCGAAGGGAGTGAAGAGAGAACGTCGTGAAGCAAAAATGAAAAATAGAGATGATGGGCCAGCCTCTAAAAAACCGAAGGAAGATTCTGAAAAACCAAAAGAGGATTTGGAATAG

Protein sequence

MNELRGGGVAGDKESFAKKPHLHPKTLTLKTPIPQKPSKIGVSLQSPEVSIFLCYLSNETLNLISFIPSPWIMLQVRTPKNRKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNAVLTEIYHLKKESAVKYSRKNDGIKPFESGGDASLEFFSLKTDCSIILYGSHSKKRPNNLVIGRTYNQHIYDLVEVGIENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNLSGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPTDGLRKEAMKTAKDQTKKKEKNVSKDLIQGKIGRIYIPDQKVGEMAIPNKSKGVKRERREAKMKNRDDGPASKKPKEDSEKPKEDLE

Homology

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BLAST of Cla97C10G202450.1 vs. NCBI nr
Match: XP_038903371.1 (ribosome production factor 2 homolog [Benincasa hispida] >XP_038903372.1 ribosome production factor 2 homolog [Benincasa hispida])

HSP 1 Score: 612.8 bits (1579), Expect = 2.0e-171
Identity = 316/322 (98.14%), Postives = 319/322 (99.07%), Query Frame = 0


Query: 73  MLQVRTPKNRKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNAVLTEIYHLKKESAVKY 132
           MLQ+RTPKNRKVKRELEKRAPKLVETGKKTLILHGTKTSGVLN VLTEIYHLKKESAVKY
Sbjct: 1   MLQIRTPKNRKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTEIYHLKKESAVKY 60

Query: 133 SRKNDGIKPFESGGDASLEFFSLKTDCSIILYGSHSKKRPNNLVIGRTYNQHIYDLVEVG 192
           SRKNDGIKPFESGGDASLEFFSLKTDCSIILYGSHSKKRPNNLVIGRTYNQHIYDLVEVG
Sbjct: 61  SRKNDGIKPFESGGDASLEFFSLKTDCSIILYGSHSKKRPNNLVIGRTYNQHIYDLVEVG 120

Query: 193 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL 252
           IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL
Sbjct: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL 180

Query: 253 SGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPTDGLR 312
           SGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPTDGLR
Sbjct: 181 SGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPTDGLR 240

Query: 313 KEAMKTAKDQTKKKEKNVSKDLIQGKIGRIYIPDQKVGEMAIPNKSKGVKRERREAKMKN 372
           KEAMKTAKDQ  KKEKNVSKDLIQGKIGRIYIPDQKVG+MAIPNKSKGVKRERREAKMKN
Sbjct: 241 KEAMKTAKDQA-KKEKNVSKDLIQGKIGRIYIPDQKVGDMAIPNKSKGVKRERREAKMKN 300

Query: 373 RDDGPASKKPKEDSEKPKEDLE 395
           RDDGPASK+PKEDSEKPKEDLE
Sbjct: 301 RDDGPASKRPKEDSEKPKEDLE 321

[Close]

BLAST of Cla97C10G202450.1 vs. NCBI nr
Match: XP_004137872.1 (ribosome production factor 2 homolog [Cucumis sativus] >KGN59060.1 hypothetical protein Csa_001595 [Cucumis sativus])

HSP 1 Score: 602.4 bits (1552), Expect = 2.7e-168
Identity = 307/322 (95.34%), Postives = 315/322 (97.83%), Query Frame = 0


Query: 73  MLQVRTPKNRKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNAVLTEIYHLKKESAVKY 132
           MLQ+RTPKNRKVKRELEKRAPKLVETGKKTLILHGTKTSGVLN VLTE+YHLKKESAVKY
Sbjct: 1   MLQIRTPKNRKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTELYHLKKESAVKY 60

Query: 133 SRKNDGIKPFESGGDASLEFFSLKTDCSIILYGSHSKKRPNNLVIGRTYNQHIYDLVEVG 192
           SRKNDGIKPFESGGDASLEFFSLKTDCSIILYGSHSKKRPNNLVI RTYNQHIYD+VEVG
Sbjct: 61  SRKNDGIKPFESGGDASLEFFSLKTDCSIILYGSHSKKRPNNLVIARTYNQHIYDMVEVG 120

Query: 193 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL 252
           IENFKSMHSF YDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLD FRGEVVENLNL
Sbjct: 121 IENFKSMHSFAYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDFFRGEVVENLNL 180

Query: 253 SGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPTDGLR 312
           SGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMV+RRHRLPTDGLR
Sbjct: 181 SGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVIRRHRLPTDGLR 240

Query: 313 KEAMKTAKDQTKKKEKNVSKDLIQGKIGRIYIPDQKVGEMAIPNKSKGVKRERREAKMKN 372
           KEAMKTAKD+ KKKEKNVSKD+IQGKIGRIYIPDQKVG+MAI +KSKGVKRERREAKMKN
Sbjct: 241 KEAMKTAKDKAKKKEKNVSKDIIQGKIGRIYIPDQKVGDMAIVDKSKGVKRERREAKMKN 300

Query: 373 RDDGPASKKPKEDSEKPKEDLE 395
           RDDGPASKKPKEDSEKPKED E
Sbjct: 301 RDDGPASKKPKEDSEKPKEDSE 322

[Close]

BLAST of Cla97C10G202450.1 vs. NCBI nr
Match: KAA0043918.1 (ribosome production factor 2-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 599.0 bits (1543), Expect = 3.0e-167
Identity = 304/322 (94.41%), Postives = 316/322 (98.14%), Query Frame = 0


Query: 73  MLQVRTPKNRKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNAVLTEIYHLKKESAVKY 132
           MLQ+RTPKNRKVKRELEKRAPKLVETGKKTLILHGTKTSGVLN VLTE+YHLKKESAVKY
Sbjct: 1   MLQIRTPKNRKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTELYHLKKESAVKY 60

Query: 133 SRKNDGIKPFESGGDASLEFFSLKTDCSIILYGSHSKKRPNNLVIGRTYNQHIYDLVEVG 192
           SRKNDGIKPFESGGDASLEFFSLKTDCSIILYGSHSKKRPNNLVI RTYNQHIYD+VEVG
Sbjct: 61  SRKNDGIKPFESGGDASLEFFSLKTDCSIILYGSHSKKRPNNLVIARTYNQHIYDMVEVG 120

Query: 193 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL 252
           IENFKSMHSF YDKKL+PRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL
Sbjct: 121 IENFKSMHSFAYDKKLAPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL 180

Query: 253 SGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPTDGLR 312
           SGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMV+RRHRLPTDGLR
Sbjct: 181 SGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVIRRHRLPTDGLR 240

Query: 313 KEAMKTAKDQTKKKEKNVSKDLIQGKIGRIYIPDQKVGEMAIPNKSKGVKRERREAKMKN 372
           KEAMKTAKD+ KKKEKNVSKD+IQGK+GRIYIPDQKVG+MAI +KSKGVKRERREAKMKN
Sbjct: 241 KEAMKTAKDKAKKKEKNVSKDIIQGKVGRIYIPDQKVGDMAIVDKSKGVKRERREAKMKN 300

Query: 373 RDDGPASKKPKEDSEKPKEDLE 395
           RDD PASKKPKEDSEKP+E+LE
Sbjct: 301 RDDAPASKKPKEDSEKPEENLE 322

[Close]

BLAST of Cla97C10G202450.1 vs. NCBI nr
Match: XP_008454852.1 (PREDICTED: LOW QUALITY PROTEIN: ribosome production factor 2 homolog [Cucumis melo])

HSP 1 Score: 592.8 bits (1527), Expect = 2.2e-165
Identity = 301/317 (94.95%), Postives = 312/317 (98.42%), Query Frame = 0


Query: 78  TPKNRKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNAVLTEIYHLKKESAVKYSRKND 137
           TPKNRKVKRELEKRAPKLVETGKKTLILHGTKTSGVLN VLTE+YHLKKESAVKYSRKND
Sbjct: 11  TPKNRKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTELYHLKKESAVKYSRKND 70

Query: 138 GIKPFESGGDASLEFFSLKTDCSIILYGSHSKKRPNNLVIGRTYNQHIYDLVEVGIENFK 197
           GIKPFESGGDASLEFFSLKTDCSIILYGSHSKKRPNNLVI RTYNQHIYD+VEVGIENFK
Sbjct: 71  GIKPFESGGDASLEFFSLKTDCSIILYGSHSKKRPNNLVIXRTYNQHIYDMVEVGIENFK 130

Query: 198 SMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNLSGLDR 257
           SMHSF YDKKL+PRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNLSGLDR
Sbjct: 131 SMHSFAYDKKLAPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNLSGLDR 190

Query: 258 VYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPTDGLRKEAMK 317
           VYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMV+RRHRLPTDGLRKEAMK
Sbjct: 191 VYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVIRRHRLPTDGLRKEAMK 250

Query: 318 TAKDQTKKKEKNVSKDLIQGKIGRIYIPDQKVGEMAIPNKSKGVKRERREAKMKNRDDGP 377
           TAKD+ KKKEKNVSKD+IQGK+GRIYIPDQKVG+MAI +KSKGVKRERREAKMKNRDDGP
Sbjct: 251 TAKDKAKKKEKNVSKDIIQGKVGRIYIPDQKVGDMAIVDKSKGVKRERREAKMKNRDDGP 310

Query: 378 ASKKPKEDSEKPKEDLE 395
           ASKKPKEDSEKP+E+LE
Sbjct: 311 ASKKPKEDSEKPEENLE 327

[Close]

BLAST of Cla97C10G202450.1 vs. NCBI nr
Match: KAG6580669.1 (Ribosome production factor 2-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 589.3 bits (1518), Expect = 2.4e-164
Identity = 300/322 (93.17%), Postives = 316/322 (98.14%), Query Frame = 0


Query: 73  MLQVRTPKNRKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNAVLTEIYHLKKESAVKY 132
           ML+VRTPKN KV+RELEKRAPK+VETGKKTLILHGTKTSGVLNAVLTE+YHLKKES+VKY
Sbjct: 1   MLKVRTPKNGKVRRELEKRAPKIVETGKKTLILHGTKTSGVLNAVLTELYHLKKESSVKY 60

Query: 133 SRKNDGIKPFESGGDASLEFFSLKTDCSIILYGSHSKKRPNNLVIGRTYNQHIYDLVEVG 192
           SRKNDGIKPFESGGD+SLEFFSLKTDCSII+YGSHSKKRP+NLVIGRTY+  IYDLVEVG
Sbjct: 61  SRKNDGIKPFESGGDSSLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDHKIYDLVEVG 120

Query: 193 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL 252
           IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL
Sbjct: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL 180

Query: 253 SGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPTDGLR 312
           +GLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLP+DGLR
Sbjct: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLR 240

Query: 313 KEAMKTAKDQTKKKEKNVSKDLIQGKIGRIYIPDQKVGEMAIPNKSKGVKRERREAKMKN 372
           KEAMKTAKDQ KKKEKNVS+D IQGKIGRIYIPDQKVG+MAIP+KSKGVKRERREAKMKN
Sbjct: 241 KEAMKTAKDQAKKKEKNVSQDAIQGKIGRIYIPDQKVGDMAIPDKSKGVKRERREAKMKN 300

Query: 373 RDDGPASKKPKEDSEKPKEDLE 395
           +DDGPASKKPKEDSEKPKE+ E
Sbjct: 301 KDDGPASKKPKEDSEKPKENSE 322

[Close]

BLAST of Cla97C10G202450.1 vs. ExPASy Swiss-Prot
Match: Q9LUG5 (Ribosome production factor 2 homolog OS=Arabidopsis thaliana OX=3702 GN=At3g23620 PE=2 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 5.1e-125
Identity = 220/315 (69.84%), Postives = 271/315 (86.03%), Query Frame = 0


Query: 73  MLQVRTPKNRKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNAVLTEIYHLKKESAVKY 132
           M+++RTPK  K KR LE RAPKLVETGKKTLILHGTKTS  L++V+TE+Y LKK  A++Y
Sbjct: 1   MMEIRTPKTGKAKRVLESRAPKLVETGKKTLILHGTKTSATLSSVMTELYRLKKGGAIRY 60

Query: 133 SRKNDGIKPFESGGDASLEFFSLKTDCSIILYGSHSKKRPNNLVIGRTYNQHIYDLVEVG 192
           SR+N+ I+PFESGG+ SLEFFS KTDCSI +YGSH+KKRP+NLV+GR Y+  +YDL+EVG
Sbjct: 61  SRRNENIRPFESGGETSLEFFSQKTDCSIFVYGSHTKKRPDNLVLGRMYDHQVYDLIEVG 120

Query: 193 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL 252
           IENFKS+ +F+YDKK +P  G+KPFI FIGEGFENV ELKHLKEVL DLFRGEVV+NLNL
Sbjct: 121 IENFKSLRAFSYDKKFAPHEGTKPFICFIGEGFENVSELKHLKEVLTDLFRGEVVDNLNL 180

Query: 253 SGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPTDGLR 312
           +GLDR YVC+AISP KVFLTHCAL+LKKSGS+VPRMELVEVGPSMD+V+RR+RLP D L 
Sbjct: 181 TGLDRAYVCSAISPTKVFLTHCALKLKKSGSIVPRMELVEVGPSMDLVIRRNRLPNDSLM 240

Query: 313 KEAMKTAKDQTKKKEKNVSKDLIQGKIGRIYIPDQKVGEMAIPNKSKGVKRERREAKMKN 372
           KEAM+T+KD+ KKKEKNV +D + GK G+IY+PDQK+ EM + +KSKG KRER++AK+K+
Sbjct: 241 KEAMRTSKDKPKKKEKNVDQDAVLGKTGKIYMPDQKLKEMKLFDKSKGSKRERKDAKLKH 300

Query: 373 RDDGPASKKPKEDSE 388
           +++   +KK K  SE
Sbjct: 301 KEE-TVAKKMKVSSE 314

[Close]

BLAST of Cla97C10G202450.1 vs. ExPASy Swiss-Prot
Match: Q9AWM9 (Ribosome production factor 2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0513800 PE=2 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 3.1e-122
Identity = 218/312 (69.87%), Postives = 271/312 (86.86%), Query Frame = 0


Query: 76  VRTPKNRKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNAVLTEIYHLKKESAVKYSRK 135
           +R P++++ KREL K APKLVETGKKTLILHGTKTS VLN+VL +++HLK+++AVKYS+K
Sbjct: 5   IRVPRSQRAKRELLKHAPKLVETGKKTLILHGTKTSAVLNSVLADLFHLKRDNAVKYSKK 64

Query: 136 NDGIKPFESGGDASLEFFSLKTDCSIILYGSHSKKRPNNLVIGRTYNQHIYDLVEVGIEN 195
           ND I+PFESGG+ SLEFFSLKTDCS+I+YGSHSKKRPNNLV+GRTY+ HIYDLVEVG+EN
Sbjct: 65  NDNIRPFESGGETSLEFFSLKTDCSLIVYGSHSKKRPNNLVLGRTYDHHIYDLVEVGVEN 124

Query: 196 FKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNLSGL 255
           +KS+ S+ YDKKL+P++GSKPF  FIGE FE+VEELKHLKEVLLDLF+GEVVENLNL+G+
Sbjct: 125 YKSIESYVYDKKLAPKLGSKPFFAFIGEHFESVEELKHLKEVLLDLFKGEVVENLNLAGV 184

Query: 256 DRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPTDGLRKEA 315
           DRV+VCTAISP  V++ HCALRLK+SG+ +PR+ELVEVGPSMD+VVRRHR P + L+KEA
Sbjct: 185 DRVFVCTAISPTTVYMMHCALRLKRSGTSIPRIELVEVGPSMDLVVRRHRYPVESLKKEA 244

Query: 316 MKTAKDQTKKKEKNVSKDLIQGKIGRIYIPDQKVGEMAIPNKSKGVKRERREAKMKNRDD 375
           MKTA     KK KNV+KD + GK+G++YIPDQ++ +M++ N  KG+KRERREAK KN+D 
Sbjct: 245 MKTA--DHAKKMKNVTKDPVHGKLGKVYIPDQQIAKMSLSNDVKGLKRERREAK-KNKDH 304

Query: 376 GPASKKPKEDSE 388
              SKK K + E
Sbjct: 305 ---SKKQKINPE 310

[Close]

BLAST of Cla97C10G202450.1 vs. ExPASy Swiss-Prot
Match: Q9JJ80 (Ribosome production factor 2 homolog OS=Mus musculus OX=10090 GN=Rpf2 PE=2 SV=2)

HSP 1 Score: 220.3 bits (560), Expect = 3.8e-56
Identity = 133/311 (42.77%), Postives = 190/311 (61.09%), Query Frame = 0


Query: 75  QVRTPKNRKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNAVLTEIYHLKKESAVKYSR 134
           +V  PK ++ KR LEKR PKL E  K  +++ G   +  +  VL ++Y LKK   V Y +
Sbjct: 6   KVLKPKTKRAKRFLEKREPKLTENIKNAMLIKGGNANATVTQVLRDMYALKKPYGVLYKK 65

Query: 135 KNDGIKPFESGGDASLEFFSLKTDCSIILYGSHSKKRPNNLVIGRTYNQHIYDLVEVGIE 194
           KN   +PFE     SLEFFS K+DCS+ ++GSH+KKRPNNLVIGR Y+ H+ D++E+GIE
Sbjct: 66  KNI-TRPFED--QTSLEFFSKKSDCSLFMFGSHNKKRPNNLVIGRMYDYHVLDMIELGIE 125

Query: 195 NFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNLSG 254
            F S+      K   P  G+KP + F G+ F+  E+ + LK +L+D FRG  V N+ L+G
Sbjct: 126 KFVSLKDIKTSK--CPE-GTKPMLIFAGDDFDVTEDFRRLKNLLIDFFRGPTVSNVRLAG 185

Query: 255 LDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPTDGLRKE 314
           L+ V   TA++  KV+     L LKKSG   PR+EL E+GPS+D+V+RR  L +D L K 
Sbjct: 186 LEYVLHFTALN-GKVYFRSYKLLLKKSGCRTPRIELEEMGPSLDLVMRRTHLASDDLYKL 245

Query: 315 AMKTAKDQTKKKEKNVSKDLIQGKIGRIYIPDQKVGEMAIPNKSKGVKRERREAKMKNRD 374
           +MK  K    KK KN+S+D      GRI++  Q + ++    K KG+K  +R A+    D
Sbjct: 246 SMKVPKALKPKKRKNISQDTFGTTFGRIHMQKQDLSKLQ-TRKMKGLK--KRPAENGVDD 305

Query: 375 DGPASKKPKED 386
            G  SK+ K++
Sbjct: 306 QGKKSKRIKKN 306

[Close]

BLAST of Cla97C10G202450.1 vs. ExPASy Swiss-Prot
Match: Q2YDN6 (Ribosome production factor 2 homolog OS=Bos taurus OX=9913 GN=RPF2 PE=2 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 6.5e-56
Identity = 131/311 (42.12%), Postives = 191/311 (61.41%), Query Frame = 0


Query: 75  QVRTPKNRKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNAVLTEIYHLKKESAVKYSR 134
           +V  PK ++ KR LEKR PKL E  K  +++ G   +  +  VL ++Y LKK   + Y +
Sbjct: 6   RVVKPKTKRAKRFLEKREPKLSENIKNAMLIKGGNANSTVTQVLRDVYALKKPYGILYKK 65

Query: 135 KNDGIKPFESGGDASLEFFSLKTDCSIILYGSHSKKRPNNLVIGRTYNQHIYDLVEVGIE 194
           KN   +PFE     SLEFFS K+DCS+ ++GSH+KKRPNNLVIGR Y+ H+ D++E+GIE
Sbjct: 66  KNI-TRPFED--QTSLEFFSKKSDCSLFMFGSHNKKRPNNLVIGRMYDYHVLDIIELGIE 125

Query: 195 NFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNLSG 254
            F S+      K   P  G+KP + F G+ F+  E+ + LK +L+D FRG  V N+ L+G
Sbjct: 126 KFVSLKDIKNSK--CPE-GTKPMLIFAGDDFDVTEDYRRLKSLLIDFFRGPTVSNIRLAG 185

Query: 255 LDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPTDGLRKE 314
           L+ V   TA++  K++     L LKKSG   PR+EL E+GPS+D+V+RR  L +D L K 
Sbjct: 186 LEYVLHFTALN-GKIYFRSYKLLLKKSGCRTPRIELEEMGPSLDLVLRRTHLASDDLYKL 245

Query: 315 AMKTAKDQTKKKEKNVSKDLIQGKIGRIYIPDQKVGEMAIPNKSKGVKRERREAKMKNRD 374
           +MK  K    KK+KN+S D      GRI++  Q + ++    K KG+K  +R A+ K  D
Sbjct: 246 SMKMPKALKPKKKKNISHDTFGTTYGRIHMQKQDLSKLQ-TRKMKGLK--KRPAERKAED 305

Query: 375 DGPASKKPKED 386
           +   SK+ K++
Sbjct: 306 EENKSKRIKKN 306

[Close]

BLAST of Cla97C10G202450.1 vs. ExPASy Swiss-Prot
Match: Q9H7B2 (Ribosome production factor 2 homolog OS=Homo sapiens OX=9606 GN=RPF2 PE=1 SV=2)

HSP 1 Score: 218.8 bits (556), Expect = 1.1e-55
Identity = 132/311 (42.44%), Postives = 190/311 (61.09%), Query Frame = 0


Query: 75  QVRTPKNRKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNAVLTEIYHLKKESAVKYSR 134
           +V  PK ++ KR LEKR PKL E  K  +++ G   +  +  VL ++Y LKK   V Y +
Sbjct: 6   RVVKPKTKRAKRFLEKREPKLNENIKNAMLIKGGNANATVTKVLKDVYALKKPYGVLYKK 65

Query: 135 KNDGIKPFESGGDASLEFFSLKTDCSIILYGSHSKKRPNNLVIGRTYNQHIYDLVEVGIE 194
           KN   +PFE     SLEFFS K+DCS+ ++GSH+KKRPNNLVIGR Y+ H+ D++E+GIE
Sbjct: 66  KNI-TRPFED--QTSLEFFSKKSDCSLFMFGSHNKKRPNNLVIGRMYDYHVLDMIELGIE 125

Query: 195 NFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNLSG 254
           NF S+      K   P  G+KP + F G+ F+  E+ + LK +L+D FRG  V N+ L+G
Sbjct: 126 NFVSLKDIKNSK--CPE-GTKPMLIFAGDDFDVTEDYRRLKSLLIDFFRGPTVSNIRLAG 185

Query: 255 LDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPTDGLRKE 314
           L+ V   TA++  K++     L LKKSG   PR+EL E+GPS+D+V+RR  L +D L K 
Sbjct: 186 LEYVLHFTALN-GKIYFRSYKLLLKKSGCRTPRIELEEMGPSLDLVLRRTHLASDDLYKL 245

Query: 315 AMKTAKDQTKKKEKNVSKDLIQGKIGRIYIPDQKVGEMAIPNKSKGVKRERREAKMKNRD 374
           +MK  K    KK+KN+S D      GRI++  Q + ++    K KG+K  +R A+    D
Sbjct: 246 SMKMPKALKPKKKKNISHDTFGTTYGRIHMQKQDLSKLQ-TRKMKGLK--KRPAERITED 305

Query: 375 DGPASKKPKED 386
               SK+ K++
Sbjct: 306 HEKKSKRIKKN 306

[Close]

BLAST of Cla97C10G202450.1 vs. ExPASy TrEMBL
Match: A0A0A0LAR1 (Ribosome production factor 2 homolog OS=Cucumis sativus OX=3659 GN=Csa_3G750370 PE=3 SV=1)

HSP 1 Score: 602.4 bits (1552), Expect = 1.3e-168
Identity = 307/322 (95.34%), Postives = 315/322 (97.83%), Query Frame = 0


Query: 73  MLQVRTPKNRKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNAVLTEIYHLKKESAVKY 132
           MLQ+RTPKNRKVKRELEKRAPKLVETGKKTLILHGTKTSGVLN VLTE+YHLKKESAVKY
Sbjct: 1   MLQIRTPKNRKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTELYHLKKESAVKY 60

Query: 133 SRKNDGIKPFESGGDASLEFFSLKTDCSIILYGSHSKKRPNNLVIGRTYNQHIYDLVEVG 192
           SRKNDGIKPFESGGDASLEFFSLKTDCSIILYGSHSKKRPNNLVI RTYNQHIYD+VEVG
Sbjct: 61  SRKNDGIKPFESGGDASLEFFSLKTDCSIILYGSHSKKRPNNLVIARTYNQHIYDMVEVG 120

Query: 193 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL 252
           IENFKSMHSF YDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLD FRGEVVENLNL
Sbjct: 121 IENFKSMHSFAYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDFFRGEVVENLNL 180

Query: 253 SGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPTDGLR 312
           SGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMV+RRHRLPTDGLR
Sbjct: 181 SGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVIRRHRLPTDGLR 240

Query: 313 KEAMKTAKDQTKKKEKNVSKDLIQGKIGRIYIPDQKVGEMAIPNKSKGVKRERREAKMKN 372
           KEAMKTAKD+ KKKEKNVSKD+IQGKIGRIYIPDQKVG+MAI +KSKGVKRERREAKMKN
Sbjct: 241 KEAMKTAKDKAKKKEKNVSKDIIQGKIGRIYIPDQKVGDMAIVDKSKGVKRERREAKMKN 300

Query: 373 RDDGPASKKPKEDSEKPKEDLE 395
           RDDGPASKKPKEDSEKPKED E
Sbjct: 301 RDDGPASKKPKEDSEKPKEDSE 322

[Close]

BLAST of Cla97C10G202450.1 vs. ExPASy TrEMBL
Match: A0A5A7TM32 (Ribosome production factor 2 homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G002580 PE=3 SV=1)

HSP 1 Score: 599.0 bits (1543), Expect = 1.5e-167
Identity = 304/322 (94.41%), Postives = 316/322 (98.14%), Query Frame = 0


Query: 73  MLQVRTPKNRKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNAVLTEIYHLKKESAVKY 132
           MLQ+RTPKNRKVKRELEKRAPKLVETGKKTLILHGTKTSGVLN VLTE+YHLKKESAVKY
Sbjct: 1   MLQIRTPKNRKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTELYHLKKESAVKY 60

Query: 133 SRKNDGIKPFESGGDASLEFFSLKTDCSIILYGSHSKKRPNNLVIGRTYNQHIYDLVEVG 192
           SRKNDGIKPFESGGDASLEFFSLKTDCSIILYGSHSKKRPNNLVI RTYNQHIYD+VEVG
Sbjct: 61  SRKNDGIKPFESGGDASLEFFSLKTDCSIILYGSHSKKRPNNLVIARTYNQHIYDMVEVG 120

Query: 193 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL 252
           IENFKSMHSF YDKKL+PRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL
Sbjct: 121 IENFKSMHSFAYDKKLAPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL 180

Query: 253 SGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPTDGLR 312
           SGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMV+RRHRLPTDGLR
Sbjct: 181 SGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVIRRHRLPTDGLR 240

Query: 313 KEAMKTAKDQTKKKEKNVSKDLIQGKIGRIYIPDQKVGEMAIPNKSKGVKRERREAKMKN 372
           KEAMKTAKD+ KKKEKNVSKD+IQGK+GRIYIPDQKVG+MAI +KSKGVKRERREAKMKN
Sbjct: 241 KEAMKTAKDKAKKKEKNVSKDIIQGKVGRIYIPDQKVGDMAIVDKSKGVKRERREAKMKN 300

Query: 373 RDDGPASKKPKEDSEKPKEDLE 395
           RDD PASKKPKEDSEKP+E+LE
Sbjct: 301 RDDAPASKKPKEDSEKPEENLE 322

[Close]

BLAST of Cla97C10G202450.1 vs. ExPASy TrEMBL
Match: A0A1S3C0A3 (Ribosome production factor 2 homolog OS=Cucumis melo OX=3656 GN=LOC103495160 PE=3 SV=1)

HSP 1 Score: 592.8 bits (1527), Expect = 1.0e-165
Identity = 301/317 (94.95%), Postives = 312/317 (98.42%), Query Frame = 0


Query: 78  TPKNRKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNAVLTEIYHLKKESAVKYSRKND 137
           TPKNRKVKRELEKRAPKLVETGKKTLILHGTKTSGVLN VLTE+YHLKKESAVKYSRKND
Sbjct: 11  TPKNRKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTELYHLKKESAVKYSRKND 70

Query: 138 GIKPFESGGDASLEFFSLKTDCSIILYGSHSKKRPNNLVIGRTYNQHIYDLVEVGIENFK 197
           GIKPFESGGDASLEFFSLKTDCSIILYGSHSKKRPNNLVI RTYNQHIYD+VEVGIENFK
Sbjct: 71  GIKPFESGGDASLEFFSLKTDCSIILYGSHSKKRPNNLVIXRTYNQHIYDMVEVGIENFK 130

Query: 198 SMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNLSGLDR 257
           SMHSF YDKKL+PRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNLSGLDR
Sbjct: 131 SMHSFAYDKKLAPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNLSGLDR 190

Query: 258 VYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPTDGLRKEAMK 317
           VYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMV+RRHRLPTDGLRKEAMK
Sbjct: 191 VYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVIRRHRLPTDGLRKEAMK 250

Query: 318 TAKDQTKKKEKNVSKDLIQGKIGRIYIPDQKVGEMAIPNKSKGVKRERREAKMKNRDDGP 377
           TAKD+ KKKEKNVSKD+IQGK+GRIYIPDQKVG+MAI +KSKGVKRERREAKMKNRDDGP
Sbjct: 251 TAKDKAKKKEKNVSKDIIQGKVGRIYIPDQKVGDMAIVDKSKGVKRERREAKMKNRDDGP 310

Query: 378 ASKKPKEDSEKPKEDLE 395
           ASKKPKEDSEKP+E+LE
Sbjct: 311 ASKKPKEDSEKPEENLE 327

[Close]

BLAST of Cla97C10G202450.1 vs. ExPASy TrEMBL
Match: A0A6J1F357 (Ribosome production factor 2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111441948 PE=3 SV=1)

HSP 1 Score: 589.0 bits (1517), Expect = 1.5e-164
Identity = 299/322 (92.86%), Postives = 316/322 (98.14%), Query Frame = 0


Query: 73  MLQVRTPKNRKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNAVLTEIYHLKKESAVKY 132
           ML++RTPKN KV+RELEKRAPK+VETGKKTLILHGTKTSGVLNAVLTE+YHLKKES+VKY
Sbjct: 1   MLKIRTPKNGKVRRELEKRAPKIVETGKKTLILHGTKTSGVLNAVLTELYHLKKESSVKY 60

Query: 133 SRKNDGIKPFESGGDASLEFFSLKTDCSIILYGSHSKKRPNNLVIGRTYNQHIYDLVEVG 192
           SRKNDGIKPFESGGD+SLEFFSLKTDCSII+YGSHSKKRP+NLVIGRTY+  IYDLVEVG
Sbjct: 61  SRKNDGIKPFESGGDSSLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDHKIYDLVEVG 120

Query: 193 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL 252
           IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL
Sbjct: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL 180

Query: 253 SGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPTDGLR 312
           +GLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLP+DGLR
Sbjct: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLR 240

Query: 313 KEAMKTAKDQTKKKEKNVSKDLIQGKIGRIYIPDQKVGEMAIPNKSKGVKRERREAKMKN 372
           KEAMKTAKDQ KKKEKNVS+D IQGKIGRIYIPDQKVG+MAIP+KSKGVKRERREAKMKN
Sbjct: 241 KEAMKTAKDQAKKKEKNVSQDAIQGKIGRIYIPDQKVGDMAIPDKSKGVKRERREAKMKN 300

Query: 373 RDDGPASKKPKEDSEKPKEDLE 395
           +DDGPASKKPKEDSEKPKE+ E
Sbjct: 301 KDDGPASKKPKEDSEKPKENSE 322

[Close]

BLAST of Cla97C10G202450.1 vs. ExPASy TrEMBL
Match: A0A6J1J655 (Ribosome production factor 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111481697 PE=3 SV=1)

HSP 1 Score: 587.0 bits (1512), Expect = 5.7e-164
Identity = 298/322 (92.55%), Postives = 316/322 (98.14%), Query Frame = 0


Query: 73  MLQVRTPKNRKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNAVLTEIYHLKKESAVKY 132
           ML+VRTPKN KV+RELEKRAPK+VETGKKTLILHGTKTSGVLNAVLTE+YHLKKES+VKY
Sbjct: 1   MLKVRTPKNGKVRRELEKRAPKIVETGKKTLILHGTKTSGVLNAVLTELYHLKKESSVKY 60

Query: 133 SRKNDGIKPFESGGDASLEFFSLKTDCSIILYGSHSKKRPNNLVIGRTYNQHIYDLVEVG 192
           SRKNDGIKPFESGGD+SLEFFSLKTDCSII+YGSHSKKRP+NLVIGRTY+  IYDL+EVG
Sbjct: 61  SRKNDGIKPFESGGDSSLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDHKIYDLIEVG 120

Query: 193 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL 252
           IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL
Sbjct: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL 180

Query: 253 SGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPTDGLR 312
           +GLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLP+DGLR
Sbjct: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLR 240

Query: 313 KEAMKTAKDQTKKKEKNVSKDLIQGKIGRIYIPDQKVGEMAIPNKSKGVKRERREAKMKN 372
           KEAMKTAKDQ KKKEKNVS+D IQGKIGRIYIPDQKVG+MAIP+KSKGVKRERREAKMK+
Sbjct: 241 KEAMKTAKDQAKKKEKNVSQDAIQGKIGRIYIPDQKVGDMAIPDKSKGVKRERREAKMKS 300

Query: 373 RDDGPASKKPKEDSEKPKEDLE 395
           +DDGPASKKPKEDSEKPKE+ E
Sbjct: 301 KDDGPASKKPKEDSEKPKENSE 322

[Close]

BLAST of Cla97C10G202450.1 vs. TAIR 10
Match: AT3G23620.1 (Ribosomal RNA processing Brix domain protein )

HSP 1 Score: 449.1 bits (1154), Expect = 3.6e-126
Identity = 220/315 (69.84%), Postives = 271/315 (86.03%), Query Frame = 0


Query: 73  MLQVRTPKNRKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNAVLTEIYHLKKESAVKY 132
           M+++RTPK  K KR LE RAPKLVETGKKTLILHGTKTS  L++V+TE+Y LKK  A++Y
Sbjct: 1   MMEIRTPKTGKAKRVLESRAPKLVETGKKTLILHGTKTSATLSSVMTELYRLKKGGAIRY 60

Query: 133 SRKNDGIKPFESGGDASLEFFSLKTDCSIILYGSHSKKRPNNLVIGRTYNQHIYDLVEVG 192
           SR+N+ I+PFESGG+ SLEFFS KTDCSI +YGSH+KKRP+NLV+GR Y+  +YDL+EVG
Sbjct: 61  SRRNENIRPFESGGETSLEFFSQKTDCSIFVYGSHTKKRPDNLVLGRMYDHQVYDLIEVG 120

Query: 193 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL 252
           IENFKS+ +F+YDKK +P  G+KPFI FIGEGFENV ELKHLKEVL DLFRGEVV+NLNL
Sbjct: 121 IENFKSLRAFSYDKKFAPHEGTKPFICFIGEGFENVSELKHLKEVLTDLFRGEVVDNLNL 180

Query: 253 SGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPTDGLR 312
           +GLDR YVC+AISP KVFLTHCAL+LKKSGS+VPRMELVEVGPSMD+V+RR+RLP D L 
Sbjct: 181 TGLDRAYVCSAISPTKVFLTHCALKLKKSGSIVPRMELVEVGPSMDLVIRRNRLPNDSLM 240

Query: 313 KEAMKTAKDQTKKKEKNVSKDLIQGKIGRIYIPDQKVGEMAIPNKSKGVKRERREAKMKN 372
           KEAM+T+KD+ KKKEKNV +D + GK G+IY+PDQK+ EM + +KSKG KRER++AK+K+
Sbjct: 241 KEAMRTSKDKPKKKEKNVDQDAVLGKTGKIYMPDQKLKEMKLFDKSKGSKRERKDAKLKH 300

Query: 373 RDDGPASKKPKEDSE 388
           +++   +KK K  SE
Sbjct: 301 KEE-TVAKKMKVSSE 314

The following BLAST results are available for this feature:

BLAST of Cla97C10G202450.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903371.1	2.0e-171	98.14	ribosome production factor 2 homolog [Benincasa hispida] >XP_038903372.1 ribosom...	[more]
XP_004137872.1	2.7e-168	95.34	ribosome production factor 2 homolog [Cucumis sativus] >KGN59060.1 hypothetical ...	[more]
KAA0043918.1	3.0e-167	94.41	ribosome production factor 2-like protein [Cucumis melo var. makuwa]	[more]
XP_008454852.1	2.2e-165	94.95	PREDICTED: LOW QUALITY PROTEIN: ribosome production factor 2 homolog [Cucumis me...	[more]
KAG6580669.1	2.4e-164	93.17	Ribosome production factor 2-like protein, partial [Cucurbita argyrosperma subsp...	[more]

BLAST of Cla97C10G202450.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LUG5	5.1e-125	69.84	Ribosome production factor 2 homolog OS=Arabidopsis thaliana OX=3702 GN=At3g2362...	[more]
Q9AWM9	3.1e-122	69.87	Ribosome production factor 2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
Q9JJ80	3.8e-56	42.77	Ribosome production factor 2 homolog OS=Mus musculus OX=10090 GN=Rpf2 PE=2 SV=2	[more]
Q2YDN6	6.5e-56	42.12	Ribosome production factor 2 homolog OS=Bos taurus OX=9913 GN=RPF2 PE=2 SV=1	[more]
Q9H7B2	1.1e-55	42.44	Ribosome production factor 2 homolog OS=Homo sapiens OX=9606 GN=RPF2 PE=1 SV=2	[more]

BLAST of Cla97C10G202450.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAR1	1.3e-168	95.34	Ribosome production factor 2 homolog OS=Cucumis sativus OX=3659 GN=Csa_3G750370 ...	[more]
A0A5A7TM32	1.5e-167	94.41	Ribosome production factor 2 homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3C0A3	1.0e-165	94.95	Ribosome production factor 2 homolog OS=Cucumis melo OX=3656 GN=LOC103495160 PE=...	[more]
A0A6J1F357	1.5e-164	92.86	Ribosome production factor 2 homolog OS=Cucurbita moschata OX=3662 GN=LOC1114419...	[more]
A0A6J1J655	5.7e-164	92.55	Ribosome production factor 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111481697...	[more]

BLAST of Cla97C10G202450.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23620.1	3.6e-126	69.84	Ribosomal RNA processing Brix domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007109	Brix domain	SMART	SM00879	Brix_2	coord: 103..304 e-value: 3.8E-35 score: 132.8
IPR007109	Brix domain	PFAM	PF04427	Brix	coord: 107..303 e-value: 1.4E-31 score: 110.1
IPR007109	Brix domain	PROSITE	PS50833	BRIX	coord: 100..310 score: 22.501247
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 357..394
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 350..394
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
IPR039770	Ribosome biogenesis protein Rpf2	PANTHER	PTHR12728	BRIX DOMAIN CONTAINING PROTEIN	coord: 73..383

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla97C10G202450	Cla97C10G202450	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C10G202450.1-exon	Cla97C10G202450.1-exon-Cla97Chr10:32350555..32350598	exon
Cla97C10G202450.1-exon	Cla97C10G202450.1-exon-Cla97Chr10:32352049..32352289	exon
Cla97C10G202450.1-exon	Cla97C10G202450.1-exon-Cla97Chr10:32352444..32352647	exon
Cla97C10G202450.1-exon	Cla97C10G202450.1-exon-Cla97Chr10:32353160..32353405	exon
Cla97C10G202450.1-exon	Cla97C10G202450.1-exon-Cla97Chr10:32353478..32353720	exon
Cla97C10G202450.1-exon	Cla97C10G202450.1-exon-Cla97Chr10:32353809..32353874	exon
Cla97C10G202450.1-exon	Cla97C10G202450.1-exon-Cla97Chr10:32354063..32354203	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C10G202450.1-cds	Cla97C10G202450.1-cds-Cla97Chr10:32350555..32350598	CDS
Cla97C10G202450.1-cds	Cla97C10G202450.1-cds-Cla97Chr10:32352049..32352289	CDS
Cla97C10G202450.1-cds	Cla97C10G202450.1-cds-Cla97Chr10:32352444..32352647	CDS
Cla97C10G202450.1-cds	Cla97C10G202450.1-cds-Cla97Chr10:32353160..32353405	CDS
Cla97C10G202450.1-cds	Cla97C10G202450.1-cds-Cla97Chr10:32353478..32353720	CDS
Cla97C10G202450.1-cds	Cla97C10G202450.1-cds-Cla97Chr10:32353809..32353874	CDS
Cla97C10G202450.1-cds	Cla97C10G202450.1-cds-Cla97Chr10:32354063..32354203	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla97C10G202450.1	Cla97C10G202450.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000470	maturation of LSU-rRNA
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0006364	rRNA processing
biological_process	GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0032774	RNA biosynthetic process
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0019843	rRNA binding