Cla97C10G194820.1 (mRNA) Watermelon (97103) v2.5

Overview


Name	Cla97C10G194820.1
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	60S ribosomal protein L44
Location	Cla97Chr10: 24295122 .. 24295844 (-)
Sequence length	723
RNA-Seq Expression	Cla97C10G194820.1
Synteny	Cla97C10G194820.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAATCTTCTGACAAAATCCCTCCCTCCAAATCCCGACCCCATTTCCTCCTCCGTTGCTTCCGATCTTCCCCCAAACTTCATCCCAAAAAGCCTTCCCCGATCGCCCCACGTAACCGCCGGACTTTCTCGCTTTCCTTCCGATTCAAGAAGTCCTCTGCAACTGTGCCGGTCGACGCTGCCGTCCCATCCCACAATGAACTCTCTTTTTCGCCGGACTTCAAGAAACCGCCTCCCCTGCCGCTGATTACACCCAGAACACCACCGGTCGGAGGCGAGATCGTCGTGGATTCGGGCTGTAAGCCAATAAAGCCGAGTCAAACTCGGAAGAAATCCGAGTCAACTCAGTCCAATTTCACGGCGGAGAAACTCTCGCCGGTGAAAAAAACCACCGCGTTGTTGCACTCTGTTTCTCTTCCCTCTCAACTATTAAACCGCCAGAATGATTTGAAAAAATCTGTCTCTTATCTCCCCGCCGCCGTCGCTACCATCGCGCCGGCGTTCTCAGACCGTCATAAACCGGCGCCAAATCTGCCGACGAATTCTCCGGCCAAGAATTTCGATCGGGTGATTGTGATTGTTATGGTGGCGATTGTGGTGCTGTGGGGGCGACTCTGCGCCATACTCTGCACGGCGGCGCTGTTCTACTTGCGACGTCGCCTGAGATCGGAAATCGTACCGGAAAGCAGCGGCAGAGGTGGTTTGGGGCGAATATCTTGA

mRNA sequence

ATGGCGGAATCTTCTGACAAAATCCCTCCCTCCAAATCCCGACCCCATTTCCTCCTCCGTTGCTTCCGATCTTCCCCCAAACTTCATCCCAAAAAGCCTTCCCCGATCGCCCCACGTAACCGCCGGACTTTCTCGCTTTCCTTCCGATTCAAGAAGTCCTCTGCAACTGTGCCGGTCGACGCTGCCGTCCCATCCCACAATGAACTCTCTTTTTCGCCGGACTTCAAGAAACCGCCTCCCCTGCCGCTGATTACACCCAGAACACCACCGGTCGGAGGCGAGATCGTCGTGGATTCGGGCTGTAAGCCAATAAAGCCGAGTCAAACTCGGAAGAAATCCGAGTCAACTCAGTCCAATTTCACGGCGGAGAAACTCTCGCCGGTGAAAAAAACCACCGCGTTGTTGCACTCTGTTTCTCTTCCCTCTCAACTATTAAACCGCCAGAATGATTTGAAAAAATCTGTCTCTTATCTCCCCGCCGCCGTCGCTACCATCGCGCCGGCGTTCTCAGACCGTCATAAACCGGCGCCAAATCTGCCGACGAATTCTCCGGCCAAGAATTTCGATCGGGTGATTGTGATTGTTATGGTGGCGATTGTGGTGCTGTGGGGGCGACTCTGCGCCATACTCTGCACGGCGGCGCTGTTCTACTTGCGACGTCGCCTGAGATCGGAAATCGTACCGGAAAGCAGCGGCAGAGGTGGTTTGGGGCGAATATCTTGA

Coding sequence (CDS)

ATGGCGGAATCTTCTGACAAAATCCCTCCCTCCAAATCCCGACCCCATTTCCTCCTCCGTTGCTTCCGATCTTCCCCCAAACTTCATCCCAAAAAGCCTTCCCCGATCGCCCCACGTAACCGCCGGACTTTCTCGCTTTCCTTCCGATTCAAGAAGTCCTCTGCAACTGTGCCGGTCGACGCTGCCGTCCCATCCCACAATGAACTCTCTTTTTCGCCGGACTTCAAGAAACCGCCTCCCCTGCCGCTGATTACACCCAGAACACCACCGGTCGGAGGCGAGATCGTCGTGGATTCGGGCTGTAAGCCAATAAAGCCGAGTCAAACTCGGAAGAAATCCGAGTCAACTCAGTCCAATTTCACGGCGGAGAAACTCTCGCCGGTGAAAAAAACCACCGCGTTGTTGCACTCTGTTTCTCTTCCCTCTCAACTATTAAACCGCCAGAATGATTTGAAAAAATCTGTCTCTTATCTCCCCGCCGCCGTCGCTACCATCGCGCCGGCGTTCTCAGACCGTCATAAACCGGCGCCAAATCTGCCGACGAATTCTCCGGCCAAGAATTTCGATCGGGTGATTGTGATTGTTATGGTGGCGATTGTGGTGCTGTGGGGGCGACTCTGCGCCATACTCTGCACGGCGGCGCTGTTCTACTTGCGACGTCGCCTGAGATCGGAAATCGTACCGGAAAGCAGCGGCAGAGGTGGTTTGGGGCGAATATCTTGA

Protein sequence

MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDAAVPSHNELSFSPDFKKPPPLPLITPRTPPVGGEIVVDSGCKPIKPSQTRKKSESTQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSYLPAAVATIAPAFSDRHKPAPNLPTNSPAKNFDRVIVIVMVAIVVLWGRLCAILCTAALFYLRRRLRSEIVPESSGRGGLGRIS

Homology

[Close]

BLAST of Cla97C10G194820.1 vs. NCBI nr
Match: KAA0052773.1 (60S ribosomal protein L44 [Cucumis melo var. makuwa] >TYK04183.1 60S ribosomal protein L44 [Cucumis melo var. makuwa])

HSP 1 Score: 322.4 bits (825), Expect = 3.3e-84
Identity = 176/239 (73.64%), Postives = 193/239 (80.75%), Query Frame = 0


Query: 1   MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVD 60
           MA+SS K PPSKS   FL  CFRSS KL  KKPS IAPRNRRTFSL+FRFKKSSATVPVD
Sbjct: 1   MADSSQKNPPSKSPFRFLFTCFRSSSKLPAKKPSSIAPRNRRTFSLTFRFKKSSATVPVD 60

Query: 61  AAVPSHNELSFSPDFKKPPPLPLITPRTPPVGGEIVVDSGCKPIKPSQTRKKSESTQSNF 120
            A PSH+ELSFSPDFKKPPPL LITP+ P V GEIVVDSG + +KPSQTRKK ESTQSNF
Sbjct: 61  VAYPSHDELSFSPDFKKPPPLSLITPKAPQVVGEIVVDSGYESLKPSQTRKKPESTQSNF 120

Query: 121 TAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVS-YLPAAVATIAPAFSDRHKPAPNL 180
           T +KLSP +K  A LHSVS PSQLL RQ D K+SVS +LPAAVAT +PAFSD +KP P L
Sbjct: 121 TTKKLSPTRKIAASLHSVSPPSQLLTRQKDFKRSVSEHLPAAVATTSPAFSDGNKPTPKL 180

Query: 181 PTNSPAKNFDRVIVIVMVAIVVLWGRLCAILCTAALFYLRRRLRSEI-VPESSGRGGLG 238
            TN P KN DRVI++VMVAI+VLWGRLCAILCT ALFYL RR+RSE+ V    GRGG G
Sbjct: 181 ATNYPVKNLDRVIMVVMVAIMVLWGRLCAILCTTALFYLGRRMRSEMEVGGGGGRGGFG 239

[Close]

BLAST of Cla97C10G194820.1 vs. NCBI nr
Match: KGN58547.1 (hypothetical protein Csa_002056 [Cucumis sativus])

HSP 1 Score: 303.5 bits (776), Expect = 1.6e-78
Identity = 169/241 (70.12%), Postives = 188/241 (78.01%), Query Frame = 0


Query: 1   MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVD 60
           MA+SS+ IPPSKS  HFL  CFRSS KL  KK S IAPR RRT S +FRFKKSSATVPVD
Sbjct: 1   MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVD 60

Query: 61  AAVPSHNELSFSPDFKKPPPLPLITPRTPPVGGEIVVDSGCKPIKPSQTRKKSESTQSNF 120
            A PSH+ELSF P+FKK PPL  I P+ P VGGEIVVDS    +KPSQTRKK  STQSNF
Sbjct: 61  VADPSHDELSFLPEFKKSPPLSFIMPKAPQVGGEIVVDSS---LKPSQTRKKPHSTQSNF 120

Query: 121 TAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVS-YLPAAVATIAPAFSDRHKPAPNL 180
           T +KLSP +KT ALLHSVSLPSQ L RQ   KK VS +LPAAVAT +PAFSD +KP P L
Sbjct: 121 TTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKL 180

Query: 181 PTNSPAKNFDRVIVIVMVAIVVLWGRLCAILCTAALFYLRRRLRSEIVPESSGRGGLGRI 240
           PT  P KNFDRVI++V+VAIV+LWGRLCAILCT ALFYL RR+RSEI P+  G  G GR+
Sbjct: 181 PTYYPVKNFDRVIMVVIVAIVMLWGRLCAILCTTALFYLGRRMRSEIEPDGGG-SGRGRL 237

[Close]

BLAST of Cla97C10G194820.1 vs. NCBI nr
Match: XP_022982640.1 (uncharacterized protein LOC111481455 [Cucurbita maxima] >XP_022982641.1 uncharacterized protein LOC111481455 [Cucurbita maxima])

HSP 1 Score: 232.3 bits (591), Expect = 4.5e-57
Identity = 143/242 (59.09%), Postives = 159/242 (65.70%), Query Frame = 0


Query: 1   MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVD 60
           MAESSD     K R HFL RCFRSSP +  +K   IA  NRRT SL FRFKK SATVP+D
Sbjct: 1   MAESSD-----KPRLHFLFRCFRSSPNVQRQKAQQIASPNRRTPSLRFRFKKCSATVPLD 60

Query: 61  AAVPSHNELSFSPDFKKPPPLPLITPRTPPVGGEIVVDSGCKPIKPSQTRKKSESTQSNF 120
           AAVP H+ELSFSP+F  PPP         P+ GEI+VDSGCK IK S+TRKKSESTQSN 
Sbjct: 61  AAVPCHDELSFSPEFNTPPP-------PSPIKGEIIVDSGCKTIKQSKTRKKSESTQSNP 120

Query: 121 TAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSYLPAAVATIAPAFSDRHKPAPNLP 180
           T EKL P KKT+  LHS          +  LKKS+S+LP AVA   P  S     +   P
Sbjct: 121 TVEKLPPAKKTSPSLHS----------EKGLKKSISHLPIAVADADPTTSLASSDSWKAP 180

Query: 181 TNSPAKNFDRVIVIVMVAIVVLWGRLCAILCTAALFYLRRRLRS--EIVPESSGRGGLGR 240
           TNSP   FD V VIV VAIVVLWGRLCAILCTAALFYLRR LRS  E+     G G  G+
Sbjct: 181 TNSPTIKFDLVTVIVAVAIVVLWGRLCAILCTAALFYLRRCLRSKAELDVVVDGGGAFGK 220

[Close]

BLAST of Cla97C10G194820.1 vs. NCBI nr
Match: XP_022934627.1 (uncharacterized protein LOC111441760 [Cucurbita moschata] >XP_022934628.1 uncharacterized protein LOC111441760 [Cucurbita moschata] >XP_022934629.1 uncharacterized protein LOC111441760 [Cucurbita moschata])

HSP 1 Score: 231.9 bits (590), Expect = 5.9e-57
Identity = 148/248 (59.68%), Postives = 164/248 (66.13%), Query Frame = 0


Query: 1   MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVD 60
           MAESSD     K R HFL RCFRSSP +  +K  PIA  NRRT SL FRFKKSSATVP+D
Sbjct: 1   MAESSD-----KPRLHFLFRCFRSSPNVQRQKAHPIASPNRRTPSLRFRFKKSSATVPLD 60

Query: 61  AAVPSHNELSFSPDFKKPPPLPLITPRTPPVGGEIVVDSGCKPIKPSQTRKKSESTQSN- 120
           AAVP H+ELS SP+F  PPP PLI        GEI+VDSGCK IKPS+TRKKSESTQSN 
Sbjct: 61  AAVPCHDELSLSPEFNTPPPPPLIK-------GEIIVDSGCKTIKPSKTRKKSESTQSNP 120

Query: 121 ---FTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSYLPAAVATIAPAF--SDRHK 180
               T    +  KKT+  LHS          +  LKKS+S+LP A A +  +   SDR K
Sbjct: 121 KSESTQSNSTAEKKTSPSLHS----------EKGLKKSISHLPTAAAALTTSLPSSDRWK 180

Query: 181 PAPNLPTNSPAKNFDRVIVIVMVAIVVLWGRLCAILCTAALFYLRRRLRS--EIVPESSG 240
           P    PTNSP K FD VIVIV VAIVVLWGRLCAILCTAALFYLRR LRS  E+     G
Sbjct: 181 P----PTNSPNKKFDLVIVIVAVAIVVLWGRLCAILCTAALFYLRRCLRSKAELDVVIHG 222

[Close]

BLAST of Cla97C10G194820.1 vs. NCBI nr
Match: KAG6581554.1 (hypothetical protein SDJN03_21556, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 229.2 bits (583), Expect = 3.8e-56
Identity = 147/248 (59.27%), Postives = 164/248 (66.13%), Query Frame = 0


Query: 1   MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVD 60
           MAESSD     K R HFL RCFRSSP +  +K  PIA  NRRT SL FRFKKSSATVP+D
Sbjct: 1   MAESSD-----KPRLHFLFRCFRSSPNVQRQKAHPIASPNRRTPSLRFRFKKSSATVPLD 60

Query: 61  AAVPSHNELSFSPDFKKPPPLPLITPRTPPVGGEIVVDSGCKPIKPSQTRKKSESTQSNF 120
           AAVP H+ELS SP+F   PP PLI        GEI+VDSGCK IKPS+TRKKSESTQSN 
Sbjct: 61  AAVPCHDELSLSPEFNTSPPPPLIK-------GEIIVDSGCKTIKPSKTRKKSESTQSNP 120

Query: 121 TAEKL----SPVKKTTALLHSVSLPSQLLNRQNDLKKSVSYLPAAVATIAPAF--SDRHK 180
            +E      +  KKT+  LHS          +  LKKS+S+LP A A +  +   SDR K
Sbjct: 121 KSESTQSDSTAEKKTSPSLHS----------EKGLKKSISHLPTAAAALTTSLPSSDRWK 180

Query: 181 PAPNLPTNSPAKNFDRVIVIVMVAIVVLWGRLCAILCTAALFYLRRRLRS--EIVPESSG 240
           P    PTNSP K FD VIVIV VAIVVLWGRLCAILCTAALFYLRR LRS  E+     G
Sbjct: 181 P----PTNSPNKKFDLVIVIVAVAIVVLWGRLCAILCTAALFYLRRCLRSKAELDVVVDG 222

[Close]

BLAST of Cla97C10G194820.1 vs. ExPASy TrEMBL
Match: A0A5A7UA28 (60S ribosomal protein L44 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1856G00090 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.6e-84
Identity = 176/239 (73.64%), Postives = 193/239 (80.75%), Query Frame = 0


Query: 1   MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVD 60
           MA+SS K PPSKS   FL  CFRSS KL  KKPS IAPRNRRTFSL+FRFKKSSATVPVD
Sbjct: 1   MADSSQKNPPSKSPFRFLFTCFRSSSKLPAKKPSSIAPRNRRTFSLTFRFKKSSATVPVD 60

Query: 61  AAVPSHNELSFSPDFKKPPPLPLITPRTPPVGGEIVVDSGCKPIKPSQTRKKSESTQSNF 120
            A PSH+ELSFSPDFKKPPPL LITP+ P V GEIVVDSG + +KPSQTRKK ESTQSNF
Sbjct: 61  VAYPSHDELSFSPDFKKPPPLSLITPKAPQVVGEIVVDSGYESLKPSQTRKKPESTQSNF 120

Query: 121 TAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVS-YLPAAVATIAPAFSDRHKPAPNL 180
           T +KLSP +K  A LHSVS PSQLL RQ D K+SVS +LPAAVAT +PAFSD +KP P L
Sbjct: 121 TTKKLSPTRKIAASLHSVSPPSQLLTRQKDFKRSVSEHLPAAVATTSPAFSDGNKPTPKL 180

Query: 181 PTNSPAKNFDRVIVIVMVAIVVLWGRLCAILCTAALFYLRRRLRSEI-VPESSGRGGLG 238
            TN P KN DRVI++VMVAI+VLWGRLCAILCT ALFYL RR+RSE+ V    GRGG G
Sbjct: 181 ATNYPVKNLDRVIMVVMVAIMVLWGRLCAILCTTALFYLGRRMRSEMEVGGGGGRGGFG 239

[Close]

BLAST of Cla97C10G194820.1 vs. ExPASy TrEMBL
Match: A0A0A0LCZ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G680630 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 7.7e-79
Identity = 169/241 (70.12%), Postives = 188/241 (78.01%), Query Frame = 0


Query: 1   MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVD 60
           MA+SS+ IPPSKS  HFL  CFRSS KL  KK S IAPR RRT S +FRFKKSSATVPVD
Sbjct: 1   MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVD 60

Query: 61  AAVPSHNELSFSPDFKKPPPLPLITPRTPPVGGEIVVDSGCKPIKPSQTRKKSESTQSNF 120
            A PSH+ELSF P+FKK PPL  I P+ P VGGEIVVDS    +KPSQTRKK  STQSNF
Sbjct: 61  VADPSHDELSFLPEFKKSPPLSFIMPKAPQVGGEIVVDSS---LKPSQTRKKPHSTQSNF 120

Query: 121 TAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVS-YLPAAVATIAPAFSDRHKPAPNL 180
           T +KLSP +KT ALLHSVSLPSQ L RQ   KK VS +LPAAVAT +PAFSD +KP P L
Sbjct: 121 TTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKL 180

Query: 181 PTNSPAKNFDRVIVIVMVAIVVLWGRLCAILCTAALFYLRRRLRSEIVPESSGRGGLGRI 240
           PT  P KNFDRVI++V+VAIV+LWGRLCAILCT ALFYL RR+RSEI P+  G  G GR+
Sbjct: 181 PTYYPVKNFDRVIMVVIVAIVMLWGRLCAILCTTALFYLGRRMRSEIEPDGGG-SGRGRL 237

[Close]

BLAST of Cla97C10G194820.1 vs. ExPASy TrEMBL
Match: A0A6J1IZW6 (uncharacterized protein LOC111481455 OS=Cucurbita maxima OX=3661 GN=LOC111481455 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 2.2e-57
Identity = 143/242 (59.09%), Postives = 159/242 (65.70%), Query Frame = 0


Query: 1   MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVD 60
           MAESSD     K R HFL RCFRSSP +  +K   IA  NRRT SL FRFKK SATVP+D
Sbjct: 1   MAESSD-----KPRLHFLFRCFRSSPNVQRQKAQQIASPNRRTPSLRFRFKKCSATVPLD 60

Query: 61  AAVPSHNELSFSPDFKKPPPLPLITPRTPPVGGEIVVDSGCKPIKPSQTRKKSESTQSNF 120
           AAVP H+ELSFSP+F  PPP         P+ GEI+VDSGCK IK S+TRKKSESTQSN 
Sbjct: 61  AAVPCHDELSFSPEFNTPPP-------PSPIKGEIIVDSGCKTIKQSKTRKKSESTQSNP 120

Query: 121 TAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSYLPAAVATIAPAFSDRHKPAPNLP 180
           T EKL P KKT+  LHS          +  LKKS+S+LP AVA   P  S     +   P
Sbjct: 121 TVEKLPPAKKTSPSLHS----------EKGLKKSISHLPIAVADADPTTSLASSDSWKAP 180

Query: 181 TNSPAKNFDRVIVIVMVAIVVLWGRLCAILCTAALFYLRRRLRS--EIVPESSGRGGLGR 240
           TNSP   FD V VIV VAIVVLWGRLCAILCTAALFYLRR LRS  E+     G G  G+
Sbjct: 181 TNSPTIKFDLVTVIVAVAIVVLWGRLCAILCTAALFYLRRCLRSKAELDVVVDGGGAFGK 220

[Close]

BLAST of Cla97C10G194820.1 vs. ExPASy TrEMBL
Match: A0A6J1F3C2 (uncharacterized protein LOC111441760 OS=Cucurbita moschata OX=3662 GN=LOC111441760 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 2.9e-57
Identity = 148/248 (59.68%), Postives = 164/248 (66.13%), Query Frame = 0


Query: 1   MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVD 60
           MAESSD     K R HFL RCFRSSP +  +K  PIA  NRRT SL FRFKKSSATVP+D
Sbjct: 1   MAESSD-----KPRLHFLFRCFRSSPNVQRQKAHPIASPNRRTPSLRFRFKKSSATVPLD 60

Query: 61  AAVPSHNELSFSPDFKKPPPLPLITPRTPPVGGEIVVDSGCKPIKPSQTRKKSESTQSN- 120
           AAVP H+ELS SP+F  PPP PLI        GEI+VDSGCK IKPS+TRKKSESTQSN 
Sbjct: 61  AAVPCHDELSLSPEFNTPPPPPLIK-------GEIIVDSGCKTIKPSKTRKKSESTQSNP 120

Query: 121 ---FTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSYLPAAVATIAPAF--SDRHK 180
               T    +  KKT+  LHS          +  LKKS+S+LP A A +  +   SDR K
Sbjct: 121 KSESTQSNSTAEKKTSPSLHS----------EKGLKKSISHLPTAAAALTTSLPSSDRWK 180

Query: 181 PAPNLPTNSPAKNFDRVIVIVMVAIVVLWGRLCAILCTAALFYLRRRLRS--EIVPESSG 240
           P    PTNSP K FD VIVIV VAIVVLWGRLCAILCTAALFYLRR LRS  E+     G
Sbjct: 181 P----PTNSPNKKFDLVIVIVAVAIVVLWGRLCAILCTAALFYLRRCLRSKAELDVVIHG 222

[Close]

BLAST of Cla97C10G194820.1 vs. ExPASy TrEMBL
Match: A0A6J1GBH7 (uncharacterized protein LOC111452650 OS=Cucurbita moschata OX=3662 GN=LOC111452650 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 4.1e-56
Identity = 139/237 (58.65%), Postives = 163/237 (68.78%), Query Frame = 0


Query: 1   MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVD 60
           MAE+S+K+ PSK   HFLLRCF SSPK+  KK      R+ R  S  FRFKKSSATVP+D
Sbjct: 1   MAEASEKMSPSKRPLHFLLRCFGSSPKVQTKKNPTTGRRDSRIPSPRFRFKKSSATVPID 60

Query: 61  AAVPS-----HNELSFSPDFKKPPPLPLITPRTPPVGGEIVVDSGCKPIKPSQTRKKSES 120
            AVP       ++ SFSP+FKKPPP PLI  R P V  +IV     + IKPSQ  KK+ES
Sbjct: 61  VAVPEITVPCDDKASFSPEFKKPPPSPLIKSRAPTVRTKIV-----ELIKPSQPWKKTES 120

Query: 121 TQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSYLPAAVATIAPAFSDRHKP 180
           T+S+F    L+P K+T ALLHS+SLPS+ LNRQ D KK+VS+L +AV T  P  S+R KP
Sbjct: 121 TRSDF----LTPAKRTAALLHSISLPSRRLNRQKDFKKTVSHL-SAVKTPTPTSSERRKP 180

Query: 181 APNLPTNSPAKNFDRVIVIVMVAIVVLWGRLCAILCTAALFYLRRRLRSEIVPESSG 233
           A   P NSPAK  D +IVIV VAIVVLWG+LCAILCT ALFY  RRLRSE   E  G
Sbjct: 181 ADKPPMNSPAKILDLIIVIVAVAIVVLWGQLCAILCTTALFYFCRRLRSETELEGGG 227

The following BLAST results are available for this feature:

BLAST of Cla97C10G194820.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0052773.1	3.3e-84	73.64	60S ribosomal protein L44 [Cucumis melo var. makuwa] >TYK04183.1 60S ribosomal p...	[more]
KGN58547.1	1.6e-78	70.12	hypothetical protein Csa_002056 [Cucumis sativus]	[more]
XP_022982640.1	4.5e-57	59.09	uncharacterized protein LOC111481455 [Cucurbita maxima] >XP_022982641.1 uncharac...	[more]
XP_022934627.1	5.9e-57	59.68	uncharacterized protein LOC111441760 [Cucurbita moschata] >XP_022934628.1 unchar...	[more]
KAG6581554.1	3.8e-56	59.27	hypothetical protein SDJN03_21556, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Cla97C10G194820.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cla97C10G194820.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UA28	1.6e-84	73.64	60S ribosomal protein L44 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A0A0LCZ2	7.7e-79	70.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G680630 PE=4 SV=1	[more]
A0A6J1IZW6	2.2e-57	59.09	uncharacterized protein LOC111481455 OS=Cucurbita maxima OX=3661 GN=LOC111481455...	[more]
A0A6J1F3C2	2.9e-57	59.68	uncharacterized protein LOC111441760 OS=Cucurbita moschata OX=3662 GN=LOC1114417...	[more]
A0A6J1GBH7	4.1e-56	58.65	uncharacterized protein LOC111452650 OS=Cucurbita moschata OX=3662 GN=LOC1114526...	[more]

BLAST of Cla97C10G194820.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..122
None	No IPR available	PANTHER	PTHR34379:SF3	PROTEIN, PUTATIVE-RELATED	coord: 1..231
IPR040411	Uncharacterized protein At5g23160-like	PANTHER	PTHR34379	OS07G0553800 PROTEIN	coord: 1..231

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla97C10G194820	Cla97C10G194820	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C10G194820.1-exon	Cla97C10G194820.1-exon-Cla97Chr10:24295122..24295844	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C10G194820.1-cds	Cla97C10G194820.1-cds-Cla97Chr10:24295122..24295844	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla97C10G194820.1	Cla97C10G194820.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005840	ribosome