Cla97C09G178090.1 (mRNA) Watermelon (97103) v2.5

Overview


Name	Cla97C09G178090.1
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Unknown protein
Location	Cla97Chr09: 30273352 .. 30273704 (+)
Sequence length	228
RNA-Seq Expression	Cla97C09G178090.1
Synteny	Cla97C09G178090.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTATGTTATCGTACGATGATGAGGACGATGTAAACGCGATCGCAGATCAAGAAGAACAGTCTCCTATTCGATCGAGCGAAACCACGTCCAAGTTGACATTGGATGAGGAGGATACAGTACACACCACATCAATCTCTAACTGAGACCTCCGAGATAACATTTACTGCAATTTTGTTTGTCGTTGCACAGATTATTTATATTTTGATTTATTTGTCCTTATAAACTATTGAATGCAATGTAGGTAAAAGAGACGATCACTCCTGCTTTGTCAAAAATACAGGAGGAAGCCAATGCAGAGATACAGAGGTTAGAGAGTATCTGGGAAGCCAACCGTGTCGCTATGAAGTAA

mRNA sequence

ATGTTTATGTTATCGTACGATGATGAGGACGATGTAAACGCGATCGCAGATCAAGAAGAACAGTCTCCTATTCGATCGAGCGAAACCACGTCCAAGTTGACATTGGATGAGGAGGATACAGTAAAAGAGACGATCACTCCTGCTTTGTCAAAAATACAGGAGGAAGCCAATGCAGAGATACAGAGGTTAGAGAGTATCTGGGAAGCCAACCGTGTCGCTATGAAGTAA

Coding sequence (CDS)

ATGTTTATGTTATCGTACGATGATGAGGACGATGTAAACGCGATCGCAGATCAAGAAGAACAGTCTCCTATTCGATCGAGCGAAACCACGTCCAAGTTGACATTGGATGAGGAGGATACAGTAAAAGAGACGATCACTCCTGCTTTGTCAAAAATACAGGAGGAAGCCAATGCAGAGATACAGAGGTTAGAGAGTATCTGGGAAGCCAACCGTGTCGCTATGAAGTAA

Protein sequence

MFMLSYDDEDDVNAIADQEEQSPIRSSETTSKLTLDEEDTVKETITPALSKIQEEANAEIQRLESIWEANRVAMK

Homology

The following BLAST results are available for this feature:

BLAST of Cla97C09G178090.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cla97C09G178090.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cla97C09G178090.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cla97C09G178090.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla97C09G178090	Cla97C09G178090	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C09G178090.1-exon	Cla97C09G178090.1-exon-Cla97Chr09:30273352..30273471	exon
Cla97C09G178090.1-exon	Cla97C09G178090.1-exon-Cla97Chr09:30273597..30273704	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C09G178090.1-cds	Cla97C09G178090.1-cds-Cla97Chr09:30273352..30273471	CDS
Cla97C09G178090.1-cds	Cla97C09G178090.1-cds-Cla97Chr09:30273597..30273704	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla97C09G178090.1	Cla97C09G178090.1-protein	polypeptide