Cla97C09G164960.1 (mRNA) Watermelon (97103) v2.5

Overview


Name	Cla97C09G164960.1
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Unknown protein
Location	Cla97Chr09: 2342175 .. 2342677 (+)
Sequence length	216
RNA-Seq Expression	Cla97C09G164960.1
Synteny	Cla97C09G164960.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATTGCTAATTAAGTTAAGGTAAGCTTAGTTTTGGAGTAGGTTAGGTTATAATTCGTTCCCTATATTACATAATATATTCCATAATTTAGAGCCTTTCACTGTGTCATCTCATAGATTGGCCTGGATCTGTGTCGGTCTCATTCTTCCAAAACAACCACTAAGCTAAATTCAACTAACTTGCCTCCACATGCAGTGGCGGATTTTCACTCACTACTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCATCACTGTTTTCACTTCACTGCAATTTCGTCGCGAAGTGGGGGAGGTTTGAGGTATCTTCTTTCCAGCTCTTCAATTTTCTCTGATTTGTCCTTCCCAATTCTCCAGGTTGTCATATTACTTGGTTGAATTTATGGGGTTCTTTCCCCTTTTGCAAGATCTTCAATTCTTCATTCCATGTTCCCACCCCTTTACGCAAAATTGTTCAGTGAATCGAGGGTTTTCGCTGAATTGCGATTAGCTTGTGCGCGTTGA

mRNA sequence

ATGGCATTGCTAATTAAGTTAAGTGGCGGATTTTCACTCACTACTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCATCACTGTTTTCACTTCACTGCAATTTCGTCGCGAAGTGGGGGAGATCTTCAATTCTTCATTCCATGTTCCCACCCCTTTACGCAAAATTGTTCAGTGAATCGAGGGTTTTCGCTGAATTGCGATTAGCTTGTGCGCGTTGA

Coding sequence (CDS)

ATGGCATTGCTAATTAAGTTAAGTGGCGGATTTTCACTCACTACTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCATCACTGTTTTCACTTCACTGCAATTTCGTCGCGAAGTGGGGGAGATCTTCAATTCTTCATTCCATGTTCCCACCCCTTTACGCAAAATTGTTCAGTGAATCGAGGGTTTTCGCTGAATTGCGATTAGCTTGTGCGCGTTGA

Protein sequence

MALLIKLSGGFSLTTSSSSSSSSSSSLFSLHCNFVAKWGRSSILHSMFPPLYAKLFSESRVFAELRLACAR

Homology

The following BLAST results are available for this feature:

BLAST of Cla97C09G164960.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cla97C09G164960.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cla97C09G164960.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cla97C09G164960.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla97C09G164960	Cla97C09G164960	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C09G164960.1-exon	Cla97C09G164960.1-exon-Cla97Chr09:2342175..2342197	exon
Cla97C09G164960.1-exon	Cla97C09G164960.1-exon-Cla97Chr09:2342373..2342468	exon
Cla97C09G164960.1-exon	Cla97C09G164960.1-exon-Cla97Chr09:2342581..2342677	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C09G164960.1-cds	Cla97C09G164960.1-cds-Cla97Chr09:2342175..2342197	CDS
Cla97C09G164960.1-cds	Cla97C09G164960.1-cds-Cla97Chr09:2342373..2342468	CDS
Cla97C09G164960.1-cds	Cla97C09G164960.1-cds-Cla97Chr09:2342581..2342677	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla97C09G164960.1	Cla97C09G164960.1-protein	polypeptide