Cla97C06G118030.2 (mRNA) Watermelon (97103) v2.5

Overview
NameCla97C06G118030.2
TypemRNA
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr06: 11001921 .. 11004256 (-)
Sequence length660
RNA-Seq ExpressionCla97C06G118030.2
SyntenyCla97C06G118030.2
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGTCTGTCACTCGCAGTTCAAATTCCTTTGCCATGGTCTGTGCCTTGAAACTCGAGACTCGCTGCTATATAAGAGCATTGAAACACAGGCAAAACCCAACCCACCAATTCATTCAGCTTAGTCTTCAGATACTTACAATATCTCTTCAGCAAGTTGGTTCCAGGAGCACCTCCATGGCGTCTTTGAAGGCTGAAAAACCTGCTCAACAAGTTGGGCAGTCTAAGAAGGAAGCTAAACCTAGCGATACTGCAGTGAAAGCTTCGCCCTCGAAGTCCAATTCAGCCTCGAAGAAGCCTGCTCAAAGATCTCAAGATCCCCCTAAAAAGGTACACACTAGTTAACTGTTTTATGATTTTAATTTTTAAACATGTTTTGAGTTTATGTATAATGTAATCATTTTCTCTCATCCTTGGTTGTGTAGAGGAAAGGGGGCAAGTCTGCTGTAAAGCATTAAATGAAAAAAGGCTGTTTCCATTTGCTTGAAAGATGAGCTAAGGCAGCAAATTGCCATTCTATTTTAGTCTGCTTTGTTATGTTTATCGTTGTATTTTAATCAGTGTCACAAGAGAGGAGCTCTCATATCTGAAATAAAAATAGGTTTCACTTACATAGCCACAAAGAGTAGAAACTCGAGTGCAGGTCAACATGAGAAAATTTATCAACCAATGCATATGATATAATAATTCTTATTATGTTTTAAATCAATAACCCTGAACACATATATTTGGCTATACACACACACAGCATCATTGAGAAAAAGTAATCAAGTTAGCAGATCAGAATGGGCTAACATTACGTGCTAACTTCAACAATAACTCCGGTACAAGGCGCCTCCTTCGGCGAGCCACTGCATCTGTGGCAAGAGCATCCCTATCATTTTCATGAATGATGAAAATCAAATCTTCAACCAACTGATCTTTACCACCTCTCATTGGATCCTATGTTAGAATTTGAGAAAAATTTTAGAACCCAACACCTAGGCATAATAAGCTTAGTATGTTTGTGATATAATAAAAAGGCAGAAGGGTAATGGCAATTTACTTTTATTACAGCACCAATAGGAGCCTACAAAAATGTTTTGCTCTCACCTGGACAAACAAATCTGTATGCGTCTTTCCTTTGTAAAGAACTGTTTCAACTTTTACTCCAAGTCTTTCAAGCACCTCTGCAAAGCTCTTACTACAGAAGAATTAAAACACAAAATAATGTAATGCATGTCTGCAGAAATATTGGCATACCTCTACCTCCAGCAAATTCAAATAACAAGCTGAATTCTCAAACTAGCATTGATATTTCTTAAGATTTTAAAACGAGAGATTTTGGGCTATTGGACAATCTGATGCGTCTGAGGAGAAAAGGACTTCTGGCAAAAGATCTTTTATATTCATATAATAGTGCATTAAAATAAACCTTGAATGTTATTTTATTCATATTTAGCACCATTTCTCATGCATAAAATATAGCAAGAGTTGTGAAAAAGAAAATTTACCTGGCATCTGATGGTATGGAATAATCTGCAGTTCCATGAAATAGAGTCAAGTGTGGAAGCAGGGAAACTGCATCTTTAATCTTTGGATCCTGTACAATAACCTCGGGAGAAAATCTTTGCAGGGACTCTTCTCCTTCCATTATGCTATATTAGACATTCAAGAAGTTACAAATTTATGTACTGAATGAATGCATAGTAAAATAAAAGAAAAAGAATGTGTTTACCTTAAAAAGATGGATCTGTGAAGACCTCGACCATGAAAGTAGTCCTTCAGATTTACCAAATTGTACCTATGTATGGATGTTGATGTTGCATAAAACAAGAAGAAACTATATAGCTGGAAAACCCATGGCACAAGAAAAAAAAAAATAAAACCTATTTAATAATAACTACTATTTAATAATAACTAACTTTTAAAATTTTATTTCTACACAAAATTCAAAGTTTGTATAACTCTAGCTGTCGTCCTCAAATAGGGCATCATACTTCTGGTTCTGGCAGGTAATTTGGCGTTTGCAGCCACAGACCAGTTAAAATGTCCTTAAATTCACTTAACACATAAGTTGGTACTCTAATTTGATACATTATTCATTGAGGAGGCACTCTTTACTTATCACTTGCTACAATCTAAAAAATGTATTACACGTGCACATTGACAGGGATTGTTTAACAGTGATCGTACTCCTCAACTCTCAGCTAAATAATAAAGAGCATGGTAAAATAAATTTCCTATCAGTAGCCAGAAAAATAAATTGTGGAGTAAAGAAATGGCCTTTCTATATGCATTTAGAATTGTCACTAAAAGAGTTCAATAGCACTTACCCCCCTGACAAACCAAAGTAA

mRNA sequence

ATGTTGTCTGTCACTCGCAGTTCAAATTCCTTTGCCATGGTCTGTGCCTTGAAACTCGAGACTCGCTGCTATATAAGAGCATTGAAACACAGGCAAAACCCAACCCACCAATTCATTCAGCTTAGTCTTCAGATACTTACAATATCTCTTCAGCAAGTTGGTTCCAGGAGCACCTCCATGGCGTCTTTGAAGGCTGAAAAACCTGCTCAACAAGTTGGGCAGTCTAAGAAGGAAGCTAAACCTAGCGATACTGCAGTGAAAGCTTCGCCCTCGAAGTCCAATTCAGCCTCGAAGAAGCCTGCTCAAAGATCTCAAGATCCCCCTAAAAAGTCTGCTTTGTTATGTTTATCGTTGTATTTTAATCAGTGTCACAAGAGAGGAGCTCTCATATCTGAAATAAAAATAGGTTTCACTTACATAGCCACAAAGAGTAGAAACTCGAGTGCAGGTAATTTGGCGTTTGCAGCCACAGACCAGGATTGTTTAACAGTGATCGTACTCCTCAACTCTCAGCTAAATAATAAAGAGCATGGTAAAATAAATTTCCTATCAGTAGCCAGAAAAATAAATTGTGGAGTAAAGAAATGGCCTTTCTATATGCATTTAGAATTGTCACTAAAAGAGTTCAATAGCACTTACCCCCCTGACAAACCAAAGTAA

Coding sequence (CDS)

ATGTTGTCTGTCACTCGCAGTTCAAATTCCTTTGCCATGGTCTGTGCCTTGAAACTCGAGACTCGCTGCTATATAAGAGCATTGAAACACAGGCAAAACCCAACCCACCAATTCATTCAGCTTAGTCTTCAGATACTTACAATATCTCTTCAGCAAGTTGGTTCCAGGAGCACCTCCATGGCGTCTTTGAAGGCTGAAAAACCTGCTCAACAAGTTGGGCAGTCTAAGAAGGAAGCTAAACCTAGCGATACTGCAGTGAAAGCTTCGCCCTCGAAGTCCAATTCAGCCTCGAAGAAGCCTGCTCAAAGATCTCAAGATCCCCCTAAAAAGTCTGCTTTGTTATGTTTATCGTTGTATTTTAATCAGTGTCACAAGAGAGGAGCTCTCATATCTGAAATAAAAATAGGTTTCACTTACATAGCCACAAAGAGTAGAAACTCGAGTGCAGGTAATTTGGCGTTTGCAGCCACAGACCAGGATTGTTTAACAGTGATCGTACTCCTCAACTCTCAGCTAAATAATAAAGAGCATGGTAAAATAAATTTCCTATCAGTAGCCAGAAAAATAAATTGTGGAGTAAAGAAATGGCCTTTCTATATGCATTTAGAATTGTCACTAAAAGAGTTCAATAGCACTTACCCCCCTGACAAACCAAAGTAA

Protein sequence

MLSVTRSSNSFAMVCALKLETRCYIRALKHRQNPTHQFIQLSLQILTISLQQVGSRSTSMASLKAEKPAQQVGQSKKEAKPSDTAVKASPSKSNSASKKPAQRSQDPPKKSALLCLSLYFNQCHKRGALISEIKIGFTYIATKSRNSSAGNLAFAATDQDCLTVIVLLNSQLNNKEHGKINFLSVARKINCGVKKWPFYMHLELSLKEFNSTYPPDKPK
Homology
The following BLAST results are available for this feature:
BLAST of Cla97C06G118030.2 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C06G118030.2 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C06G118030.2 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C06G118030.2 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..108

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cla97C06G118030Cla97C06G118030gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C06G118030.2-exonCla97C06G118030.2-exon-Cla97Chr06:11001921..11002104exon
Cla97C06G118030.2-exonCla97C06G118030.2-exon-Cla97Chr06:11002235..11002262exon
Cla97C06G118030.2-exonCla97C06G118030.2-exon-Cla97Chr06:11003614..11003731exon
Cla97C06G118030.2-exonCla97C06G118030.2-exon-Cla97Chr06:11003927..11004256exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C06G118030.2-cdsCla97C06G118030.2-cds-Cla97Chr06:11001921..11002104CDS
Cla97C06G118030.2-cdsCla97C06G118030.2-cds-Cla97Chr06:11002235..11002262CDS
Cla97C06G118030.2-cdsCla97C06G118030.2-cds-Cla97Chr06:11003614..11003731CDS
Cla97C06G118030.2-cdsCla97C06G118030.2-cds-Cla97Chr06:11003927..11004256CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cla97C06G118030.2Cla97C06G118030.2-proteinpolypeptide