Cla97C06G111740.1 (mRNA) Watermelon (97103) v2.5

Overview


Name	Cla97C06G111740.1
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	major pollen allergen Ole e 6-like
Location	Cla97Chr06: 2521611 .. 2522935 (-)
Sequence length	258
RNA-Seq Expression	Cla97C06G111740.1
Synteny	Cla97C06G111740.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAAGAAGAAAATGATTGCAATGTTTCTAATGTGCATTGTGGTGGTGGCTGCTTTGCAATTTTCCACTGCCAATGGAGAGGAGAAAGTGGACAAATATGAAGCCAAATTTGAGGCCAAATACAAATCTTGCTATCAAACTTGTGAGAAGGAATGCCTTCACACTGGTAATGGCCAAAGTTTTTGTGAAGTTAAATGTGATGAAGATTGTGATGAAAAACAAACTGCTGGTACTCACCTCTCTCTTTTTCCAATAACTTATCATTTCTTTACATATAAATTCGAGTGTTTCCACGTTTAATTATATGAGTTGTTTTCAAACATCGTAAAATAAGTCGAAATATTTATAAATATAACAAAATATCATATTTGAGATGATACTGTCTATTAATAACATTTTGCCATATTTATAAATATTTTGAGTAATTTTTATCATTTTAAACAATTATTCCAATTATATAATCATTAAAAATTTGATATTATATAATAAAAATACAGAAACTTACAATTTGTTTAAAATTTTTCTTAAATGGGCGTATTTGGTTAGAAATCTAGATTTATGTTTTTAGTGTATTCACTCAGATTTTAAGATGAAAAATTGTAAAAATTTTAAAATAAAAAATAAAATCTAGTATTTTAGGTTATAAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAAAATTAAAATATGTATCAGGTATTTTATTATAAATTATATAATAATACAAAATAATAAAAAAAATTATTATAGATATAGAAAAAAATATCAAACTATTTACAAATATAACAAAATTTTACTTTCTATATGTGAAAATTTTACATTTTACGTGTGATAAACCGTTTATCACTATAGATGATAGAAAGTAAAATTTTGTTATATTTGTAATATTTTCAATAGTTTTTCTATTTTTGAAACATCTCAAATAATAATCATTCAATTTTTTTTTTTTTTTGAAATATTACTAAAGGTCGAGGGATCAGTAGGCACACCTAGATATCTCAACTAGGGTGACACATTCTTAGTGCTCTCATCACGTCCCGACCCAAAAAGATATATTGATATGGAAATAGAGAATGTACACAAAGATTTAATTAAGATATTCATAAATCAATTAATAATACTTTATACTATATTTAAAATTTAGTGGATAATTAGGACTAATTAAAAAATAATTATTTAATTTAGCCAAACATATCTATGAAAAACATGAAATAGAATTCTTTGTTTGAAAACTAATAAATAATTACTATCTCATATTAACTAAATTGTTGGGTTTGTTTTACAGATAAGCTGCACATCAACTTGCCTTGA

mRNA sequence

ATGGGGAAGAAGAAAATGATTGCAATGTTTCTAATGTGCATTGTGGTGGTGGCTGCTTTGCAATTTTCCACTGCCAATGGAGAGGAGAAAGTGGACAAATATGAAGCCAAATTTGAGGCCAAATACAAATCTTGCTATCAAACTTGTGAGAAGGAATGCCTTCACACTGGTAATGGCCAAAGTTTTTGTGAAGTTAAATGTGATGAAGATTGTGATGAAAAACAAACTGCTGATAAGCTGCACATCAACTTGCCTTGA

Coding sequence (CDS)

ATGGGGAAGAAGAAAATGATTGCAATGTTTCTAATGTGCATTGTGGTGGTGGCTGCTTTGCAATTTTCCACTGCCAATGGAGAGGAGAAAGTGGACAAATATGAAGCCAAATTTGAGGCCAAATACAAATCTTGCTATCAAACTTGTGAGAAGGAATGCCTTCACACTGGTAATGGCCAAAGTTTTTGTGAAGTTAAATGTGATGAAGATTGTGATGAAAAACAAACTGCTGATAAGCTGCACATCAACTTGCCTTGA

Protein sequence

MGKKKMIAMFLMCIVVVAALQFSTANGEEKVDKYEAKFEAKYKSCYQTCEKECLHTGNGQSFCEVKCDEDCDEKQTADKLHINLP

Homology

[Close]

BLAST of Cla97C06G111740.1 vs. NCBI nr
Match: XP_038906482.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 138.7 bits (348), Expect = 2.4e-29
Identity = 67/81 (82.72%), Postives = 72/81 (88.89%), Query Frame = 0


Query: 4  KKMIAMFLMCIVVVAALQFSTANGEEKVDKYEAKFEAKYKSCYQTCEKECLHTGNGQSFC 63
          KK+IAMFLMCIVV+ ALQF TAN  E+VDKYEAKFEAKYKSCY+TCEKECL   NGQSFC
Sbjct: 3  KKIIAMFLMCIVVMGALQFGTAN--EEVDKYEAKFEAKYKSCYETCEKECLQNSNGQSFC 62

Query: 64 EVKCDEDCDEKQTADKLHINL 85
          EVKCDEDCDEK+ ADKLHI L
Sbjct: 63 EVKCDEDCDEKEVADKLHIGL 81

[Close]

BLAST of Cla97C06G111740.1 vs. NCBI nr
Match: XP_038906682.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 138.3 bits (347), Expect = 3.1e-29
Identity = 67/79 (84.81%), Postives = 74/79 (93.67%), Query Frame = 0


Query: 4  KKMIAMFLMCIVVVAALQFSTANGEEKVDKYEAKFEAKYKSCYQTCEKECLHTGNGQSFC 63
          KKMIA+FLMCIVV+AALQF+TAN  E+V KYEAKF+AKYKSCY+TCEKECL  GNGQSFC
Sbjct: 3  KKMIAVFLMCIVVMAALQFTTAN--EEVAKYEAKFDAKYKSCYETCEKECLEKGNGQSFC 62

Query: 64 EVKCDEDCDEKQTADKLHI 83
          EVKCDEDCDEK+TADKLHI
Sbjct: 63 EVKCDEDCDEKETADKLHI 79

[Close]

BLAST of Cla97C06G111740.1 vs. NCBI nr
Match: XP_038906677.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 137.9 bits (346), Expect = 4.1e-29
Identity = 66/81 (81.48%), Postives = 74/81 (91.36%), Query Frame = 0


Query: 4  KKMIAMFLMCIVVVAALQFSTANGEEKVDKYEAKFEAKYKSCYQTCEKECLHTGNGQSFC 63
          KK+IA+F MCIVV+AA QF+TAN  E+V+KYEAKFEAKYKSCY+TCEKECL  GNGQSFC
Sbjct: 3  KKIIAVFFMCIVVMAAFQFATAN--EEVEKYEAKFEAKYKSCYETCEKECLEGGNGQSFC 62

Query: 64 EVKCDEDCDEKQTADKLHINL 85
          EVKCDEDCDEK+TADKLHI L
Sbjct: 63 EVKCDEDCDEKETADKLHIEL 81

[Close]

BLAST of Cla97C06G111740.1 vs. NCBI nr
Match: XP_038891517.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 137.5 bits (345), Expect = 5.4e-29
Identity = 66/81 (81.48%), Postives = 75/81 (92.59%), Query Frame = 0


Query: 4  KKMIAMFLMCIVVVAALQFSTANGEEKVDKYEAKFEAKYKSCYQTCEKECLHTGNGQSFC 63
          KKM+A+FLMCIVVVAALQF+TAN E++V KYEAKF+AKYKSCY+TCEKECL  G+GQSFC
Sbjct: 3  KKMMAVFLMCIVVVAALQFATAN-EDEVTKYEAKFDAKYKSCYETCEKECLANGSGQSFC 62

Query: 64 EVKCDEDCDEKQTADKLHINL 85
          EVKCDEDCDEK+ ADKLHI L
Sbjct: 63 EVKCDEDCDEKEVADKLHIKL 82

[Close]

BLAST of Cla97C06G111740.1 vs. NCBI nr
Match: XP_008456958.1 (PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo] >KAA0066995.1 major pollen allergen Ole e 6-like [Cucumis melo var. makuwa] >TYJ96804.1 major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 136.7 bits (343), Expect = 9.1e-29
Identity = 63/81 (77.78%), Postives = 75/81 (92.59%), Query Frame = 0


Query: 4  KKMIAMFLMCIVVVAALQFSTANGEEKVDKYEAKFEAKYKSCYQTCEKECLHTGNGQSFC 63
          KKMIA+FLMCIVVVAALQF++AN E++V KYEAKF+AKYKSC++TCEKECL  G+GQS+C
Sbjct: 3  KKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQSYC 62

Query: 64 EVKCDEDCDEKQTADKLHINL 85
          EVKCDEDC+EK+ ADKLHI L
Sbjct: 63 EVKCDEDCNEKEVADKLHIEL 83

[Close]

BLAST of Cla97C06G111740.1 vs. ExPASy Swiss-Prot
Match: O24172 (Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 3.2e-08
Identity = 24/42 (57.14%), Postives = 29/42 (69.05%), Query Frame = 0


Query: 39 EAKYKSCYQTCEKECLHTGNGQSFCEVKCDEDCDEKQTADKL 81
          EA++K CY TC KEC   GNG +FCE+KCD DC  K   +KL
Sbjct: 2  EAQFKECYDTCHKECSDKGNGFTFCEMKCDTDCSVKDVKEKL 43

[Close]

BLAST of Cla97C06G111740.1 vs. ExPASy TrEMBL
Match: A0A5D3BCS2 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00230 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 4.4e-29
Identity = 63/81 (77.78%), Postives = 75/81 (92.59%), Query Frame = 0


Query: 4  KKMIAMFLMCIVVVAALQFSTANGEEKVDKYEAKFEAKYKSCYQTCEKECLHTGNGQSFC 63
          KKMIA+FLMCIVVVAALQF++AN E++V KYEAKF+AKYKSC++TCEKECL  G+GQS+C
Sbjct: 3  KKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQSYC 62

Query: 64 EVKCDEDCDEKQTADKLHINL 85
          EVKCDEDC+EK+ ADKLHI L
Sbjct: 63 EVKCDEDCNEKEVADKLHIEL 83

[Close]

BLAST of Cla97C06G111740.1 vs. ExPASy TrEMBL
Match: A0A1S3C530 (major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 4.4e-29
Identity = 63/81 (77.78%), Postives = 75/81 (92.59%), Query Frame = 0


Query: 4  KKMIAMFLMCIVVVAALQFSTANGEEKVDKYEAKFEAKYKSCYQTCEKECLHTGNGQSFC 63
          KKMIA+FLMCIVVVAALQF++AN E++V KYEAKF+AKYKSC++TCEKECL  G+GQS+C
Sbjct: 3  KKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQSYC 62

Query: 64 EVKCDEDCDEKQTADKLHINL 85
          EVKCDEDC+EK+ ADKLHI L
Sbjct: 63 EVKCDEDCNEKEVADKLHIEL 83

[Close]

BLAST of Cla97C06G111740.1 vs. ExPASy TrEMBL
Match: A0A0A0KCI6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106710 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.7e-28
Identity = 62/84 (73.81%), Postives = 74/84 (88.10%), Query Frame = 0


Query: 1  MGKKKMIAMFLMCIVVVAALQFSTANGEEKVDKYEAKFEAKYKSCYQTCEKECLHTG-NG 60
          M KKKM+ + L+CIVV+AAL+FS  NGEEK DKYE+KF+AKYK+CY++CEKECL  G NG
Sbjct: 1  MAKKKMMGVLLICIVVMAALEFSIVNGEEKEDKYESKFDAKYKTCYESCEKECLENGNNG 60

Query: 61 QSFCEVKCDEDCDEKQTADKLHIN 84
          QSFCEVKCDEDC EK++ADKLHIN
Sbjct: 61 QSFCEVKCDEDCGEKESADKLHIN 84

[Close]

BLAST of Cla97C06G111740.1 vs. ExPASy TrEMBL
Match: A0A0A0KPA7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222980 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.2e-27
Identity = 63/80 (78.75%), Postives = 72/80 (90.00%), Query Frame = 0


Query: 5  KMIAMFLMCIVVVAALQFSTANGEEKVDKYEAKFEAKYKSCYQTCEKECLHTGNGQSFCE 64
          KMIA+FLMCIVVVAALQF+ AN +E V KYEAKF+AKYKSC++TCEKECL  G+GQS+CE
Sbjct: 4  KMIALFLMCIVVVAALQFANAN-KEDVAKYEAKFDAKYKSCFETCEKECLRYGSGQSYCE 63

Query: 65 VKCDEDCDEKQTADKLHINL 85
          VKCDEDCDEK+ ADKLHI L
Sbjct: 64 VKCDEDCDEKEAADKLHIEL 82

[Close]

BLAST of Cla97C06G111740.1 vs. ExPASy TrEMBL
Match: A0A5D3DM52 (Carotenoid cleavage dioxygenase 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002640 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 5.4e-27
Identity = 61/81 (75.31%), Postives = 72/81 (88.89%), Query Frame = 0


Query: 4  KKMIAMFLMCIVVVAALQFSTANGEEKVDKYEAKFEAKYKSCYQTCEKECLHTG-NGQSF 63
          KKM+ + L+CIVV+AAL+FS ANGEEK DKYE+KF+AKYKSCY++CEKECL  G NGQSF
Sbjct: 3  KKMMGVLLICIVVMAALEFSIANGEEKKDKYESKFDAKYKSCYESCEKECLQNGNNGQSF 62

Query: 64 CEVKCDEDCDEKQTADKLHIN 84
          CEVKCDEDCDEK+ ADKL I+
Sbjct: 63 CEVKCDEDCDEKEVADKLRID 83

The following BLAST results are available for this feature:

BLAST of Cla97C06G111740.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906482.1	2.4e-29	82.72	major pollen allergen Ole e 6-like [Benincasa hispida]	[more]
XP_038906682.1	3.1e-29	84.81	major pollen allergen Ole e 6-like [Benincasa hispida]	[more]
XP_038906677.1	4.1e-29	81.48	major pollen allergen Ole e 6-like [Benincasa hispida]	[more]
XP_038891517.1	5.4e-29	81.48	major pollen allergen Ole e 6-like [Benincasa hispida]	[more]
XP_008456958.1	9.1e-29	77.78	PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo] >KAA0066995.1 major...	[more]

BLAST of Cla97C06G111740.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24172	3.2e-08	57.14	Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1	[more]

BLAST of Cla97C06G111740.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BCS2	4.4e-29	77.78	Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3C530	4.4e-29	77.78	major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 ...	[more]
A0A0A0KCI6	3.7e-28	73.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106710 PE=4 SV=1	[more]
A0A0A0KPA7	3.2e-27	78.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222980 PE=4 SV=1	[more]
A0A5D3DM52	5.4e-27	75.31	Carotenoid cleavage dioxygenase 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of Cla97C06G111740.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015333	Pollen allergen ole e 6	PFAM	PF09253	Ole_e_6	coord: 45..81 e-value: 8.7E-13 score: 48.0
IPR015333	Pollen allergen ole e 6	PANTHER	PTHR35632	MAJOR POLLEN ALLERGEN OLE E 6-LIKE	coord: 4..84
IPR036466	Pollen allergen ole e 6 superfamily	GENE3D	1.10.287.720	Pollen allergen ole e 6	coord: 39..83 e-value: 4.9E-16 score: 60.0
IPR036466	Pollen allergen ole e 6 superfamily	SUPERFAMILY	111388	Pollen allergen ole e 6	coord: 39..80
None	No IPR available	PANTHER	PTHR35632:SF5	SUBFAMILY NOT NAMED	coord: 4..84

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla97C06G111740	Cla97C06G111740	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C06G111740.1-exon	Cla97C06G111740.1-exon-Cla97Chr06:2521611..2521636	exon
Cla97C06G111740.1-exon	Cla97C06G111740.1-exon-Cla97Chr06:2522704..2522935	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C06G111740.1-cds	Cla97C06G111740.1-cds-Cla97Chr06:2521611..2521636	CDS
Cla97C06G111740.1-cds	Cla97C06G111740.1-cds-Cla97Chr06:2522704..2522935	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla97C06G111740.1	Cla97C06G111740.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016121	carotene catabolic process
biological_process	GO:0009733	response to auxin
biological_process	GO:0010223	secondary shoot formation
biological_process	GO:1901601	strigolactone biosynthetic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen