Cla97C02G047710.1 (mRNA) Watermelon (97103) v2.5

Overview


Name	Cla97C02G047710.1
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Serine/arginine repetitive matrix protein 1-like
Location	Cla97Chr02: 35351970 .. 35352671 (+)
Sequence length	702
RNA-Seq Expression	Cla97C02G047710.1
Synteny	Cla97C02G047710.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAACGCCCCGCCGGTCACCGCCGTCCAACGCCTCTCCCGGAACCCTAACCCTAACCCTAACCCTAACCCAATCCAACAATCCAACCGATCAACTCCATTTCACCGACGAAGATGAACTCAATCTCCTGAATTGCTACCTCCAAATCGCCAGATCCGAAAACCCCACCAAGAATTCTCAACCCACTCTCGATTCTCCGACCTTGGACCGCATCCAGACCGCTATCGGACCCAAATTCACCCACTCCCACATCGCCGATAAGCTCCACCGCCTCAAACTCCTGTACCACAAATTCGCAAGAACCAAGTCTTTCATCAAGACTCCCCACCACCGTCAGATCCTCGAGCTTGGCCGCTGCATCTGGGGAAAATCCCCCACACCTATAACAAGAAAACCACAGGTAATTTCACCTTCACGAGCACTTTCACGAAGAATCAAACAAAGGTCAATCTCAAGACTCTCAAGGAAAGAAAAGGTTGATCTGAAGAACTATCCTGTTCTTGTGGGTGAATTTTCTCGGCTGTTTCCGGGCAATGGGGTGTGGAGAGAAGGGCTGCGGGCAATAGAAGAGAAGAGTTTGAAGGATATGAATGAGAAGTGGGTTTTGTTGCATATTGAAGGGGCAGAGCTTAAGGCAAGAAGGGCTTCATTATTAAAGCAGCAACTTAGAATTACGGAGACTTCTGAAGATGTGAATTAG

mRNA sequence

ATGTCAACGCCCCGCCGGTCACCGCCGTCCAACGCCTCTCCCGGAACCCTAACCCTAACCCTAACCCTAACCCAATCCAACAATCCAACCGATCAACTCCATTTCACCGACGAAGATGAACTCAATCTCCTGAATTGCTACCTCCAAATCGCCAGATCCGAAAACCCCACCAAGAATTCTCAACCCACTCTCGATTCTCCGACCTTGGACCGCATCCAGACCGCTATCGGACCCAAATTCACCCACTCCCACATCGCCGATAAGCTCCACCGCCTCAAACTCCTGTACCACAAATTCGCAAGAACCAAGTCTTTCATCAAGACTCCCCACCACCGTCAGATCCTCGAGCTTGGCCGCTGCATCTGGGGAAAATCCCCCACACCTATAACAAGAAAACCACAGGTAATTTCACCTTCACGAGCACTTTCACGAAGAATCAAACAAAGGTCAATCTCAAGACTCTCAAGGAAAGAAAAGGTTGATCTGAAGAACTATCCTGTTCTTGTGGGTGAATTTTCTCGGCTGTTTCCGGGCAATGGGGTGTGGAGAGAAGGGCTGCGGGCAATAGAAGAGAAGAGTTTGAAGGATATGAATGAGAAGTGGGTTTTGTTGCATATTGAAGGGGCAGAGCTTAAGGCAAGAAGGGCTTCATTATTAAAGCAGCAACTTAGAATTACGGAGACTTCTGAAGATGTGAATTAG

Coding sequence (CDS)

ATGTCAACGCCCCGCCGGTCACCGCCGTCCAACGCCTCTCCCGGAACCCTAACCCTAACCCTAACCCTAACCCAATCCAACAATCCAACCGATCAACTCCATTTCACCGACGAAGATGAACTCAATCTCCTGAATTGCTACCTCCAAATCGCCAGATCCGAAAACCCCACCAAGAATTCTCAACCCACTCTCGATTCTCCGACCTTGGACCGCATCCAGACCGCTATCGGACCCAAATTCACCCACTCCCACATCGCCGATAAGCTCCACCGCCTCAAACTCCTGTACCACAAATTCGCAAGAACCAAGTCTTTCATCAAGACTCCCCACCACCGTCAGATCCTCGAGCTTGGCCGCTGCATCTGGGGAAAATCCCCCACACCTATAACAAGAAAACCACAGGTAATTTCACCTTCACGAGCACTTTCACGAAGAATCAAACAAAGGTCAATCTCAAGACTCTCAAGGAAAGAAAAGGTTGATCTGAAGAACTATCCTGTTCTTGTGGGTGAATTTTCTCGGCTGTTTCCGGGCAATGGGGTGTGGAGAGAAGGGCTGCGGGCAATAGAAGAGAAGAGTTTGAAGGATATGAATGAGAAGTGGGTTTTGTTGCATATTGAAGGGGCAGAGCTTAAGGCAAGAAGGGCTTCATTATTAAAGCAGCAACTTAGAATTACGGAGACTTCTGAAGATGTGAATTAG

Protein sequence

MSTPRRSPPSNASPGTLTLTLTLTQSNNPTDQLHFTDEDELNLLNCYLQIARSENPTKNSQPTLDSPTLDRIQTAIGPKFTHSHIADKLHRLKLLYHKFARTKSFIKTPHHRQILELGRCIWGKSPTPITRKPQVISPSRALSRRIKQRSISRLSRKEKVDLKNYPVLVGEFSRLFPGNGVWREGLRAIEEKSLKDMNEKWVLLHIEGAELKARRASLLKQQLRITETSEDVN

Homology

[Close]

BLAST of Cla97C02G047710.1 vs. NCBI nr
Match: KAA0037301.1 (serine/arginine repetitive matrix protein 1-like [Cucumis melo var. makuwa] >TYK24183.1 serine/arginine repetitive matrix protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 364.4 bits (934), Expect = 7.4e-97
Identity = 188/228 (82.46%), Postives = 202/228 (88.60%), Query Frame = 0


Query: 1   MSTPRRSPPSNASPGTLTLTLTLTQSNNPTDQLHFTDEDELNLLNCYLQIARSENPTKNS 60
           MSTP RS PSNASP TLTLTLTLTQ NN TDQLHFTDEDE+NLL  YLQI+RSENPTKNS
Sbjct: 1   MSTPHRSLPSNASPETLTLTLTLTQPNNQTDQLHFTDEDEINLLKSYLQISRSENPTKNS 60

Query: 61  QPTLDSPTLDRIQTAIGPKFTHSHIADKLHRLKLLYHKFARTKSFIKTPHHRQILELGRC 120
            PTLDSP  DR+QTA+GPKF+HS IADKLHRLKLLYHKFARTKSFIKTPH RQIL+LGR 
Sbjct: 61  LPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKSFIKTPHQRQILDLGRS 120

Query: 121 IWGKSPTPITRKPQVISPSRALSRRIKQRSISRLSRKE----KVDLKNYPVLVGEFSRLF 180
           IWGKSPTPITRKPQVISPSR LSRRIKQRS    +RKE     +DLKN+PVLV EFS+ F
Sbjct: 121 IWGKSPTPITRKPQVISPSRILSRRIKQRS---STRKEGVGVDIDLKNFPVLVAEFSQQF 180

Query: 181 PGNGVWREGLRAIEEKSLKDMNEKWVLLHIEGAELKARRASLLKQQLR 225
           PGNGVWREGLR +EEK+LKDMNEKWVLLHIEGAELKARRA+LLKQQL+
Sbjct: 181 PGNGVWREGLRRMEEKNLKDMNEKWVLLHIEGAELKARRAALLKQQLK 225

[Close]

BLAST of Cla97C02G047710.1 vs. NCBI nr
Match: KGN46890.1 (hypothetical protein Csa_020607 [Cucumis sativus])

HSP 1 Score: 357.5 bits (916), Expect = 9.0e-95
Identity = 187/237 (78.90%), Postives = 203/237 (85.65%), Query Frame = 0


Query: 1   MSTPRRSPPSNASPGTLTLTLTLTQSNNPTDQLHFTDEDELNLLNCYLQIARSENPTKNS 60
           MST  RSPPS+ASP       TLTQSNN  DQLHF DEDE+NLLN YLQI+RSENPTKNS
Sbjct: 1   MSTLHRSPPSSASPE------TLTQSNNQIDQLHFNDEDEINLLNSYLQISRSENPTKNS 60

Query: 61  QPTLDSPTLDRIQTAIGPKFTHSHIADKLHRLKLLYHKFARTKSFIKTPHHRQILELGRC 120
            PTLDS   DR+QTA+GPKF+HS IADKLHRLKLLYHKFARTKSFIKTPH RQIL+LGR 
Sbjct: 61  LPTLDSQAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKSFIKTPHQRQILDLGRS 120

Query: 121 IWGKSPTPITRKPQVISPSRALSRRIKQRSISRLSRKE----KVDLKNYPVLVGEFSRLF 180
           IWGKSPTP+TRKPQVISPSR LSRRIKQRSI   +RKE     VDLKN+PVLV EFSR F
Sbjct: 121 IWGKSPTPVTRKPQVISPSRLLSRRIKQRSI---TRKEGVGVDVDLKNFPVLVAEFSRQF 180

Query: 181 PGNGVWREGLRAIEEKSLKDMNEKWVLLHIEGAELKARRASLLKQQLRITETSEDVN 234
           PGNGVWR+GLR + EK+LKDMNEKWVLLHIEGAELKARRA+LLK+QLR TET+EDVN
Sbjct: 181 PGNGVWRDGLRRMNEKNLKDMNEKWVLLHIEGAELKARRAALLKEQLRTTETNEDVN 228

[Close]

BLAST of Cla97C02G047710.1 vs. NCBI nr
Match: KAG6570827.1 (hypothetical protein SDJN03_29742, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 299.7 bits (766), Expect = 2.2e-77
Identity = 160/227 (70.48%), Postives = 180/227 (79.30%), Query Frame = 0


Query: 1   MSTPRRSPPSNASPGTLTLTLTLTQSNNPTDQLHFTDEDELNLLNCYLQIARSENPTKNS 60
           MSTP R PPSNASP TLT               HF++EDELNLLNCYLQIARS NPT NS
Sbjct: 1   MSTPHRFPPSNASPETLT---------------HFSEEDELNLLNCYLQIARSANPTSNS 60

Query: 61  QPTLDSPTLDRIQTAIGPKFTHSHIADKLHRLKLLYHKFARTKSFIKTPHHRQILELGRC 120
           QPTLDSP LDRI+TA+ PKFT+SHIADKLHRLKL YHK ARTKS IKTPHHR+ILE+GR 
Sbjct: 61  QPTLDSPALDRIETALRPKFTYSHIADKLHRLKLQYHKLARTKSLIKTPHHRRILEIGRS 120

Query: 121 IWGKSPTPITRKPQVISPSRALSRRIKQRSISRLSRKEKVDLKNYPVLVGEFSRLFPGNG 180
           IWGK PT  T KPQ I   RA+ RRIKQRS    S K+ VDL ++PVL+ EFSR FPGNG
Sbjct: 121 IWGKPPTSRT-KPQAI--LRAIPRRIKQRS---GSSKKGVDLNDFPVLLSEFSRRFPGNG 180

Query: 181 VWREGLRAIEEKSLKDMNEKWVLLHIEGAELKARRASLLKQQLRITE 228
           VW+EGLR +EEKSL+DMNEKWVLLHIE AELKARRA+LL++QLR+ +
Sbjct: 181 VWKEGLRGMEEKSLRDMNEKWVLLHIEEAELKARRAALLQKQLRLAD 206

[Close]

BLAST of Cla97C02G047710.1 vs. NCBI nr
Match: KAG6606028.1 (hypothetical protein SDJN03_03345, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 277.7 bits (709), Expect = 9.1e-71
Identity = 152/231 (65.80%), Postives = 177/231 (76.62%), Query Frame = 0


Query: 1   MSTPRRSPPSNASPGTL-TLTLTLTQSNNPTDQLHFTDEDELNLLNCYLQIARSENPTKN 60
           MSTPRRSPPS  +  +       LTQS     Q+HFTDEDEL+LLNCYL++A S    KN
Sbjct: 1   MSTPRRSPPSTGNRASSDAAPEPLTQSQKNQLQVHFTDEDELDLLNCYLEVAGS----KN 60

Query: 61  SQPTLDSPTLDRIQTAIGPKFTHSHIADKLHRLKLLYHKFARTKSFIKTPHHRQILELGR 120
           SQPTLDSP LDRI TA+G KF HSHIADKLHRLK+ YHKFARTKSFIKTPHH +ILE+GR
Sbjct: 61  SQPTLDSPALDRIATALGHKFRHSHIADKLHRLKIQYHKFARTKSFIKTPHHLRILEIGR 120

Query: 121 CIWGKSPTPITRKPQVISPSRALSRRIKQRSISRLSRKEKVDLKNYPVLVGEFSRLFPGN 180
            IWGK   P T KPQVI      SRRI+ RS+   ++K+ VDLKN+PVLV EFSR FPGN
Sbjct: 121 SIWGKPHIPRT-KPQVI------SRRIRGRSV---AKKKGVDLKNFPVLVSEFSRQFPGN 180

Query: 181 GVWREGLRAIEEKSLKDMNEKWVLLHIEGAELKARRASLLKQQLRITETSE 231
           GVWREGL+ +EE SLK MNEKWVLLHIE AELKARR +L+++Q+  T+T +
Sbjct: 181 GVWREGLKGMEEWSLKGMNEKWVLLHIEEAELKARRVALIQRQIGTTQTKD 217

[Close]

BLAST of Cla97C02G047710.1 vs. NCBI nr
Match: XP_006424433.1 (probable transcription factor At1g11510 [Citrus clementina] >ESR37673.1 hypothetical protein CICLE_v10029167mg [Citrus clementina])

HSP 1 Score: 147.1 bits (370), Expect = 1.9e-31
Identity = 85/233 (36.48%), Postives = 138/233 (59.23%), Query Frame = 0


Query: 2   STPRRSPPSNASPGTLTLTLTLTQSNNPTDQLHFTDEDELNLLNCYLQIAR-----SENP 61
           STPR+      SP        ++   +P  ++ FTD DE+ LL  + ++A      S + 
Sbjct: 3   STPRKRKQVATSP--------VSSPTSPNGRV-FTDSDEIRLLKIFKKLAEQNRSSSSSS 62

Query: 62  TKNSQPTLDSPTLDRIQTAIGPKFTHSHIADKLHRLKLLYHKFARTKSFIKTPHHRQILE 121
           T NS  TLDS + +RI +++G KFTH+ I DK+ RL++ YHK AR+KS IKTPH + + +
Sbjct: 63  TPNSTITLDSSSFNRINSSLGSKFTHAQITDKIRRLRVKYHKQARSKSLIKTPHDQALFK 122

Query: 122 LGRCIWGKSPTPITRKPQVISPSRAL---SRRIKQRSISRLSR-KEKVDLKNYPVLVGEF 181
           + + IWGK  T   ++ + +  S +        +Q++     R +E  +L  YPVL GE 
Sbjct: 123 IAQLIWGKKKTNRKKEAKKVQNSASADDEDEGEEQKNEQNEEREREGAELDEYPVLAGEL 182

Query: 182 SRLFPGNGVWREGLRAIEEKSLKDMNEKWVLLHIEGAELKARRASLLKQQLRI 226
           S+  P N VWRE L+++    LK+MN+KW+L+ IE A++ +++A L+K+Q ++
Sbjct: 183 SKYLPMNLVWREALKSLGNDKLKEMNDKWMLIGIEEAKIVSKKADLVKEQTQL 226

[Close]

BLAST of Cla97C02G047710.1 vs. ExPASy TrEMBL
Match: A0A5A7T6T1 (Serine/arginine repetitive matrix protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1754G00170 PE=3 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 3.6e-97
Identity = 188/228 (82.46%), Postives = 202/228 (88.60%), Query Frame = 0


Query: 1   MSTPRRSPPSNASPGTLTLTLTLTQSNNPTDQLHFTDEDELNLLNCYLQIARSENPTKNS 60
           MSTP RS PSNASP TLTLTLTLTQ NN TDQLHFTDEDE+NLL  YLQI+RSENPTKNS
Sbjct: 1   MSTPHRSLPSNASPETLTLTLTLTQPNNQTDQLHFTDEDEINLLKSYLQISRSENPTKNS 60

Query: 61  QPTLDSPTLDRIQTAIGPKFTHSHIADKLHRLKLLYHKFARTKSFIKTPHHRQILELGRC 120
            PTLDSP  DR+QTA+GPKF+HS IADKLHRLKLLYHKFARTKSFIKTPH RQIL+LGR 
Sbjct: 61  LPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKSFIKTPHQRQILDLGRS 120

Query: 121 IWGKSPTPITRKPQVISPSRALSRRIKQRSISRLSRKE----KVDLKNYPVLVGEFSRLF 180
           IWGKSPTPITRKPQVISPSR LSRRIKQRS    +RKE     +DLKN+PVLV EFS+ F
Sbjct: 121 IWGKSPTPITRKPQVISPSRILSRRIKQRS---STRKEGVGVDIDLKNFPVLVAEFSQQF 180

Query: 181 PGNGVWREGLRAIEEKSLKDMNEKWVLLHIEGAELKARRASLLKQQLR 225
           PGNGVWREGLR +EEK+LKDMNEKWVLLHIEGAELKARRA+LLKQQL+
Sbjct: 181 PGNGVWREGLRRMEEKNLKDMNEKWVLLHIEGAELKARRAALLKQQLK 225

[Close]

BLAST of Cla97C02G047710.1 vs. ExPASy TrEMBL
Match: A0A0A0KAX7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G148320 PE=3 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 4.4e-95
Identity = 187/237 (78.90%), Postives = 203/237 (85.65%), Query Frame = 0


Query: 1   MSTPRRSPPSNASPGTLTLTLTLTQSNNPTDQLHFTDEDELNLLNCYLQIARSENPTKNS 60
           MST  RSPPS+ASP       TLTQSNN  DQLHF DEDE+NLLN YLQI+RSENPTKNS
Sbjct: 1   MSTLHRSPPSSASPE------TLTQSNNQIDQLHFNDEDEINLLNSYLQISRSENPTKNS 60

Query: 61  QPTLDSPTLDRIQTAIGPKFTHSHIADKLHRLKLLYHKFARTKSFIKTPHHRQILELGRC 120
            PTLDS   DR+QTA+GPKF+HS IADKLHRLKLLYHKFARTKSFIKTPH RQIL+LGR 
Sbjct: 61  LPTLDSQAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKSFIKTPHQRQILDLGRS 120

Query: 121 IWGKSPTPITRKPQVISPSRALSRRIKQRSISRLSRKE----KVDLKNYPVLVGEFSRLF 180
           IWGKSPTP+TRKPQVISPSR LSRRIKQRSI   +RKE     VDLKN+PVLV EFSR F
Sbjct: 121 IWGKSPTPVTRKPQVISPSRLLSRRIKQRSI---TRKEGVGVDVDLKNFPVLVAEFSRQF 180

Query: 181 PGNGVWREGLRAIEEKSLKDMNEKWVLLHIEGAELKARRASLLKQQLRITETSEDVN 234
           PGNGVWR+GLR + EK+LKDMNEKWVLLHIEGAELKARRA+LLK+QLR TET+EDVN
Sbjct: 181 PGNGVWRDGLRRMNEKNLKDMNEKWVLLHIEGAELKARRAALLKEQLRTTETNEDVN 228

[Close]

BLAST of Cla97C02G047710.1 vs. ExPASy TrEMBL
Match: V4RSW9 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10029167mg PE=3 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 9.0e-32
Identity = 85/233 (36.48%), Postives = 138/233 (59.23%), Query Frame = 0


Query: 2   STPRRSPPSNASPGTLTLTLTLTQSNNPTDQLHFTDEDELNLLNCYLQIAR-----SENP 61
           STPR+      SP        ++   +P  ++ FTD DE+ LL  + ++A      S + 
Sbjct: 3   STPRKRKQVATSP--------VSSPTSPNGRV-FTDSDEIRLLKIFKKLAEQNRSSSSSS 62

Query: 62  TKNSQPTLDSPTLDRIQTAIGPKFTHSHIADKLHRLKLLYHKFARTKSFIKTPHHRQILE 121
           T NS  TLDS + +RI +++G KFTH+ I DK+ RL++ YHK AR+KS IKTPH + + +
Sbjct: 63  TPNSTITLDSSSFNRINSSLGSKFTHAQITDKIRRLRVKYHKQARSKSLIKTPHDQALFK 122

Query: 122 LGRCIWGKSPTPITRKPQVISPSRAL---SRRIKQRSISRLSR-KEKVDLKNYPVLVGEF 181
           + + IWGK  T   ++ + +  S +        +Q++     R +E  +L  YPVL GE 
Sbjct: 123 IAQLIWGKKKTNRKKEAKKVQNSASADDEDEGEEQKNEQNEEREREGAELDEYPVLAGEL 182

Query: 182 SRLFPGNGVWREGLRAIEEKSLKDMNEKWVLLHIEGAELKARRASLLKQQLRI 226
           S+  P N VWRE L+++    LK+MN+KW+L+ IE A++ +++A L+K+Q ++
Sbjct: 183 SKYLPMNLVWREALKSLGNDKLKEMNDKWMLIGIEEAKIVSKKADLVKEQTQL 226

[Close]

BLAST of Cla97C02G047710.1 vs. ExPASy TrEMBL
Match: A0A2H5MZL8 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_281630 PE=3 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 2.0e-31
Identity = 86/235 (36.60%), Postives = 137/235 (58.30%), Query Frame = 0


Query: 2   STPRRSPPSNASPGTLTLTLTLTQSNNPTDQ--LHFTDEDELNLLNCYLQIAR-----SE 61
           STPR+      SP            ++PT Q    FTD DE+ LL  + ++A      S 
Sbjct: 3   STPRKRKQVATSP-----------VSSPTSQNGRVFTDSDEIRLLKIFKKLAEQNRSSSS 62

Query: 62  NPTKNSQPTLDSPTLDRIQTAIGPKFTHSHIADKLHRLKLLYHKFARTKSFIKTPHHRQI 121
           + T NS  TLDS + +RI +++G KFTH+ I DK+ RL++ YHK AR+KS +KTPH + +
Sbjct: 63  SSTPNSTITLDSSSFNRINSSLGSKFTHAQITDKIRRLRVKYHKQARSKSLVKTPHDQAL 122

Query: 122 LELGRCIWGKSPTPITRKPQVISPSRAL---SRRIKQRSISRLSR-KEKVDLKNYPVLVG 181
            ++ + IWGK  T   ++ + +  S +        +Q++     R +E  +L  YPVL G
Sbjct: 123 FKIAQLIWGKKKTNRKKEAKKVQNSASADDEDEGEEQKNEQNEEREREGAELDEYPVLAG 182

Query: 182 EFSRLFPGNGVWREGLRAIEEKSLKDMNEKWVLLHIEGAELKARRASLLKQQLRI 226
           E S+  P N VWRE L+++    LK+MN+KW+L+ IE A++ +++A L+K+Q ++
Sbjct: 183 ELSKYLPMNLVWREALKSLGNDKLKEMNDKWMLIGIEEAKIVSKKADLVKEQTQL 226

[Close]

BLAST of Cla97C02G047710.1 vs. ExPASy TrEMBL
Match: A0A6P3Z773 (probable transcription factor At1g61730 OS=Ziziphus jujuba OX=326968 GN=LOC107410682 PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 4.9e-30
Identity = 90/235 (38.30%), Postives = 134/235 (57.02%), Query Frame = 0


Query: 2   STPRRSPPSNASPGTLTLT-LTLTQSNNPTDQLH----------FTDEDELNLLNCYLQI 61
           S+ +R+ PS+ SP T T T    + S +P +Q            FT+EDE +LL  +  I
Sbjct: 9   SSSKRNKPSSNSPTTTTNTKQPSSSSRSPPEQFSGSQKIRPQRLFTEEDETHLLQIFYHI 68

Query: 62  ARSENPTKNSQPTLDSPTLDRIQTAIGPKFTHSHIADKLHRLKLLYHKFARTKSFIKTPH 121
            +S  P+      ++SP LDRI+ ++G +F+H+ I DKL RL+L YHK ARTKS IKT H
Sbjct: 69  TKSSPPSS----AINSPNLDRIEKSLGLRFSHTQIIDKLRRLRLKYHKQARTKSLIKTHH 128

Query: 122 HRQILELGRCIWGKSPTPITRKPQVISPSRALSRRIKQRSISRLSRKEKVDLKNYPVLVG 181
            R++ ++ R IWG+            S SR   +  +++      R   V L+ +PVL  
Sbjct: 129 DREVYKIARKIWGRKG----------SNSRG-GKTEEEKEKEEEQRIGDVGLEEFPVLKH 188

Query: 182 EFSRLFPGNGVWREGLRAIEEKSLKDMNEKWVLLHIEGAELKARRASLLKQQLRI 226
           E   +  GN VW++GL  +EEK+LK +NEKW+LL +E AE+ A RA L K+ + +
Sbjct: 189 EAFGVLQGNVVWKKGLMGLEEKTLKGLNEKWMLLKMEEAEVMATRAELEKEVVEL 228

The following BLAST results are available for this feature:

BLAST of Cla97C02G047710.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0037301.1	7.4e-97	82.46	serine/arginine repetitive matrix protein 1-like [Cucumis melo var. makuwa] >TYK...	[more]
KGN46890.1	9.0e-95	78.90	hypothetical protein Csa_020607 [Cucumis sativus]	[more]
KAG6570827.1	2.2e-77	70.48	hypothetical protein SDJN03_29742, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6606028.1	9.1e-71	65.80	hypothetical protein SDJN03_03345, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_006424433.1	1.9e-31	36.48	probable transcription factor At1g11510 [Citrus clementina] >ESR37673.1 hypothet...	[more]

BLAST of Cla97C02G047710.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cla97C02G047710.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T6T1	3.6e-97	82.46	Serine/arginine repetitive matrix protein 1-like OS=Cucumis melo var. makuwa OX=...	[more]
A0A0A0KAX7	4.4e-95	78.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G148320 PE=3 SV=1	[more]
V4RSW9	9.0e-32	36.48	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10029167mg PE=3 ...	[more]
A0A2H5MZL8	2.0e-31	36.60	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_281630 PE=3 SV=1	[more]
A0A6P3Z773	4.9e-30	38.30	probable transcription factor At1g61730 OS=Ziziphus jujuba OX=326968 GN=LOC10741...	[more]

BLAST of Cla97C02G047710.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007592	GLABROUS1 enhancer-binding protein family	PFAM	PF04504	DUF573	coord: 34..123 e-value: 1.5E-8 score: 35.1
IPR007592	GLABROUS1 enhancer-binding protein family	PANTHER	PTHR31662	BNAANNG10740D PROTEIN-RELATED	coord: 22..225
None	No IPR available	PANTHER	PTHR31662:SF39	SUBFAMILY NOT NAMED	coord: 22..225

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla97C02G047710	Cla97C02G047710	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C02G047710.1-exon	Cla97C02G047710.1-exon-Cla97Chr02:35351970..35352671	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C02G047710.1-cds	Cla97C02G047710.1-cds-Cla97Chr02:35351970..35352671	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla97C02G047710.1	Cla97C02G047710.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus