Cla97C02G027010.1 (mRNA) Watermelon (97103) v2.5

Overview


Name	Cla97C02G027010.1
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	neurofilament heavy polypeptide-like isoform X1
Location	Cla97Chr02: 706709 .. 709469 (+)
Sequence length	1101
RNA-Seq Expression	Cla97C02G027010.1
Synteny	Cla97C02G027010.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGCTTGTGCGACTAAGCCGAAGGCCGACGGCAGCTTGGCTCCGGCACCGGAACCGGAGAAGAGGGATGTTGATGCTCCAGTCGCTGTTGAACCTGAGAACAAAGTTGACGTTCCGGCGGTGGAAGAAGTTGCCGGAGAGGGAAACCAAAGCGATAGAGGCAAGGAAGTTGTTGATGTTGACGACGATAAGGTGGATGATCAGAGTGTAAAACGCCGCTCACTTAGCAACTTATTTAAGGAGGTATTGCTTAATCATCGTCTATTTTCCTTTTTTCCTTCTTTGATTTGGTTTCTATTTTCTTCCGATTGTCGATTGCTCATCAGTCTTGAGTTTCTTTTGAGAATCTGATGGTGTTTCGTTAAGTACAAATCAATATATTGTTTGAGGAATTCATATTCATCGTTCTTCTTTTTAAAAATTTATGAAGTCTTAGGTTTTTTCTTTCTCGCTATTCGTTGTTCGTTGAATGAAGTGGAGGATTGTGATGGTTGATTTTGAAATTAGGGGATTCTGTCGCTGTTTGGTTCTCGAGAAATAATTAGGGAAAAAAGTTAAAGAAAATGAAGAATTATGTTATTGATACCTCGTGTTTCTGAATTAGAATAAATTTCAATGAACTATTGTCGTTTTGTGATAGCTTTTTCATATTTTCTTTCGGAACCTCCACGTTTATTCGCGAATCTCGGCGGTTTCTCGGGAACCAAACAGATTTGTTTACTCTTTTCCAGAAGGGAACTTTTATCCTCTTTTGGACGTAAAGGGAACTGAACCGTCCTCCCAAAGGTGAAAAAGCGATGTAAAGAAATGCAATTATTTGTTCCAAAATGGCACAGTTCTTCATAATTTATGACTTGTCGGCATCCTAAAATTTAGAGATTCAAACTTTCAAGAAAAATTTTCATCTTCTTTTCAATGGTCCCTTTTTCGATTCAAGAACTCTGTTTGATTGATTGGACGTTTGGATATATAATATATAGCATTCAGGACTCAGGAGGCTTGATAATTTATTTAAGTCCGAATCTTTTGCACTTAAGAATCAATACATGGAATCTTCACATTCCACAACACCATTCGTTTGGTGACAAACAAAAGTGTCCTTCCTTGAGGGGCCACCCTTTTCTTCTCCTCTTTCTTCTGTTATTTCTGGTCATGTGTTGCCTCCATTCCGTGATTGTTTCCCGCCTCATTCAACTTTACATGTTTGGCTGCACCCTATAGAAGTTTCTTTCGTTCCCATGTGATCTTGATGGGAAAAGCCTTGATACATTTTTCACCCGCACGTTCGGACATGACATGTCCTCTGGGCCCTAGTTGTTACACGGTCCTTCAACCGGTAAAACGCCGTTGGTTTCGTGTAAGATATTGATTTGTAGGTTATGTTGATAGTTGACCTTAGGATCAGGGTCATTAATTAACGCTCCATGGGCCTTGCTTTTATTGGCTCCACTCCTCTGCAGGTATTTAGAATGTTGAGATGCTTTGAATTTGTTATCCCACGTCCGAAGGAAATAGGAAAGCTACGAGTTCCTATATCCAAAAGGAATTTGGTTATTCTCTCTTTTTACTAGTTGTTTGTTGAATGTGCATTGCTTGAAAAATGACTTTTCATCAATATGATCTTGCATTGCCAATTGATGGGTGCCCAAATTGATTATGTATATAAATGAGATGTGTGTATTCATAAATAGTTAGCTAGCTTAGCTGTAGCTGTGCTTTGAAGTTGTCGGTTCGAACTGCTTCCAAATTTGGGACACAAAGTTTGGTTTGATCTACTCAGATCAATTTTGGAAAAATTGAAAATATCATATGACAGCTGAAAGTGTTTCTGCATATATTCTAAATCCTCATTCAATGTCTTCTTAAATTATTGTTCTAAATGTAAAATGTGAATCTTCTGCAGAAAGAAGGGAGTGAATCAATTGAATTTGAGAAGCCAGCAGGGGAAACAGAGACACTGGAGGCTAAAGAGACAGAAATACATACAAAAGAAGTCGAGATAAAGGCACCTCAAACTGAAGTAGAAACCGAAAAGTGTACCGAGGAGGAGGCCGAGACAAAGGTGCCTCAAACTGTAGTAGTAACTGAGGAAGTTGACACTAAGGCCCCTCAAACTGTAGTAGAGACCGAAAAACATACTGAAGAAGCTGAGAAGAAGGGGCCTGAAACTGCAGTAGAAACTAAAAAACATATCGAAGAAGCTGAGACGAAGGCACCTCAAACTGTAGTAGAGACCGAAAAACACGTCGAAGAAGCTGAGGCGAAGGCACCTCAAACTGTAGTAGAGACCGAAAAACACGTCGAAGAAGCTGAGGCGAAGGCACCTCAAACTGTAGTAGAGACCGAAAAACACGTCGAAGAAGCTGATACGAAGGCACCTCAAACTGTAATGGAGCCTGAAAAATCTGAAATTCCAATTGAAAGGATACAGATCACCGATGTTCCGACAACTTCTGAGAGCATTGTTGTGGAGAAAGTAATTACGCCAACGAGTGAAACATTAGAAGATGTAAAATTGGCCGAGAAAGTCGAGAAAACTGAAGTAGTGACAGTAGTTGAAGCAACACCAGCAACAGATGAGAGTAACACGTCTGAGAAGAAGAAAGAAGAAGATATCAGTGATGTCAAGAAGACCGAGACGGAGACAGCGAAAGATACCGAACCGAAGGCCATTGCTCCAACCGAAAGCATTACCAAACCAGCAAAGGGGAACGATGAAGCAGCGAAGGTAACTGCTGAGGAAAAAACAACAAGTTGA

mRNA sequence

ATGGGAGCTTGTGCGACTAAGCCGAAGGCCGACGGCAGCTTGGCTCCGGCACCGGAACCGGAGAAGAGGGATGTTGATGCTCCAGTCGCTGTTGAACCTGAGAACAAAGTTGACGTTCCGGCGGTGGAAGAAGTTGCCGGAGAGGGAAACCAAAGCGATAGAGGCAAGGAAGTTGTTGATGTTGACGACGATAAGGTGGATGATCAGAGTGTAAAACGCCGCTCACTTAGCAACTTATTTAAGGAGAAAGAAGGGAGTGAATCAATTGAATTTGAGAAGCCAGCAGGGGAAACAGAGACACTGGAGGCTAAAGAGACAGAAATACATACAAAAGAAGTCGAGATAAAGGCACCTCAAACTGAAGTAGAAACCGAAAAGTGTACCGAGGAGGAGGCCGAGACAAAGGTGCCTCAAACTGTAGTAGTAACTGAGGAAGTTGACACTAAGGCCCCTCAAACTGTAGTAGAGACCGAAAAACATACTGAAGAAGCTGAGAAGAAGGGGCCTGAAACTGCAGTAGAAACTAAAAAACATATCGAAGAAGCTGAGACGAAGGCACCTCAAACTGTAGTAGAGACCGAAAAACACGTCGAAGAAGCTGAGGCGAAGGCACCTCAAACTGTAGTAGAGACCGAAAAACACGTCGAAGAAGCTGAGGCGAAGGCACCTCAAACTGTAGTAGAGACCGAAAAACACGTCGAAGAAGCTGATACGAAGGCACCTCAAACTGTAATGGAGCCTGAAAAATCTGAAATTCCAATTGAAAGGATACAGATCACCGATGTTCCGACAACTTCTGAGAGCATTGTTGTGGAGAAAGTAATTACGCCAACGAGTGAAACATTAGAAGATGTAAAATTGGCCGAGAAAGTCGAGAAAACTGAAGTAGTGACAGTAGTTGAAGCAACACCAGCAACAGATGAGAGTAACACGTCTGAGAAGAAGAAAGAAGAAGATATCAGTGATGTCAAGAAGACCGAGACGGAGACAGCGAAAGATACCGAACCGAAGGCCATTGCTCCAACCGAAAGCATTACCAAACCAGCAAAGGGGAACGATGAAGCAGCGAAGGTAACTGCTGAGGAAAAAACAACAAGTTGA

Coding sequence (CDS)

ATGGGAGCTTGTGCGACTAAGCCGAAGGCCGACGGCAGCTTGGCTCCGGCACCGGAACCGGAGAAGAGGGATGTTGATGCTCCAGTCGCTGTTGAACCTGAGAACAAAGTTGACGTTCCGGCGGTGGAAGAAGTTGCCGGAGAGGGAAACCAAAGCGATAGAGGCAAGGAAGTTGTTGATGTTGACGACGATAAGGTGGATGATCAGAGTGTAAAACGCCGCTCACTTAGCAACTTATTTAAGGAGAAAGAAGGGAGTGAATCAATTGAATTTGAGAAGCCAGCAGGGGAAACAGAGACACTGGAGGCTAAAGAGACAGAAATACATACAAAAGAAGTCGAGATAAAGGCACCTCAAACTGAAGTAGAAACCGAAAAGTGTACCGAGGAGGAGGCCGAGACAAAGGTGCCTCAAACTGTAGTAGTAACTGAGGAAGTTGACACTAAGGCCCCTCAAACTGTAGTAGAGACCGAAAAACATACTGAAGAAGCTGAGAAGAAGGGGCCTGAAACTGCAGTAGAAACTAAAAAACATATCGAAGAAGCTGAGACGAAGGCACCTCAAACTGTAGTAGAGACCGAAAAACACGTCGAAGAAGCTGAGGCGAAGGCACCTCAAACTGTAGTAGAGACCGAAAAACACGTCGAAGAAGCTGAGGCGAAGGCACCTCAAACTGTAGTAGAGACCGAAAAACACGTCGAAGAAGCTGATACGAAGGCACCTCAAACTGTAATGGAGCCTGAAAAATCTGAAATTCCAATTGAAAGGATACAGATCACCGATGTTCCGACAACTTCTGAGAGCATTGTTGTGGAGAAAGTAATTACGCCAACGAGTGAAACATTAGAAGATGTAAAATTGGCCGAGAAAGTCGAGAAAACTGAAGTAGTGACAGTAGTTGAAGCAACACCAGCAACAGATGAGAGTAACACGTCTGAGAAGAAGAAAGAAGAAGATATCAGTGATGTCAAGAAGACCGAGACGGAGACAGCGAAAGATACCGAACCGAAGGCCATTGCTCCAACCGAAAGCATTACCAAACCAGCAAAGGGGAACGATGAAGCAGCGAAGGTAACTGCTGAGGAAAAAACAACAAGTTGA

Protein sequence

MGACATKPKADGSLAPAPEPEKRDVDAPVAVEPENKVDVPAVEEVAGEGNQSDRGKEVVDVDDDKVDDQSVKRRSLSNLFKEKEGSESIEFEKPAGETETLEAKETEIHTKEVEIKAPQTEVETEKCTEEEAETKVPQTVVVTEEVDTKAPQTVVETEKHTEEAEKKGPETAVETKKHIEEAETKAPQTVVETEKHVEEAEAKAPQTVVETEKHVEEAEAKAPQTVVETEKHVEEADTKAPQTVMEPEKSEIPIERIQITDVPTTSESIVVEKVITPTSETLEDVKLAEKVEKTEVVTVVEATPATDESNTSEKKKEEDISDVKKTETETAKDTEPKAIAPTESITKPAKGNDEAAKVTAEEKTTS

Homology

[Close]

BLAST of Cla97C02G027010.1 vs. NCBI nr
Match: XP_038902634.1 (probable serine/threonine-protein kinase kinX [Benincasa hispida])

HSP 1 Score: 458.8 bits (1179), Expect = 4.5e-125
Identity = 287/377 (76.13%), Postives = 311/377 (82.49%), Query Frame = 0


Query: 1   MGACATKPKADGSLAPAPEPEKRDVDAPVAVEPENKVDVPAVEEVAGEGNQSDRGKEVVD 60
           MGACATKPKADGSLAPAPEPEK+DVDA VAVEP+NKVDVPAVEEV+GEGNQSD+GKEVVD
Sbjct: 1   MGACATKPKADGSLAPAPEPEKKDVDAVVAVEPQNKVDVPAVEEVSGEGNQSDKGKEVVD 60

Query: 61  VDDDKVDDQSVKRRSLSNLFKEKEGSESIEFEKPAGETETLEAKETEIHTKEVEIKAPQT 120
           VDDDKVDDQSVKRRSLSNLFKEKEGSES+E EKPAGETET+E+KETEIHTKEVEIKAPQT
Sbjct: 61  VDDDKVDDQSVKRRSLSNLFKEKEGSESLECEKPAGETETVESKETEIHTKEVEIKAPQT 120

Query: 121 EVETEKCTEEEAETKVPQTVVVTEEVDTKAPQTVVETEKHTEEAEKKGPETAVETKKHIE 180
           EVE E CT E AETKV QTV+VTE+ DTKAPQTVVET+K T                  E
Sbjct: 121 EVEIETCT-EAAETKVLQTVLVTEDADTKAPQTVVETKKDT------------------E 180

Query: 181 EAETKAPQTVVETEKHVEEAEAKAPQTVVETEKHVEEAEAKAPQTVVETEKHVEEADTKA 240
           EAETK PQTVVET++H EEAE KAP TVVE EK  EE + + PQ VVETEKH EE +TK 
Sbjct: 181 EAETKVPQTVVETKEHTEEAETKAPVTVVEAEKRTEEVKTETPQIVVETEKHTEEDETKV 240

Query: 241 PQTVMEPEKSEIPIERIQITDVPTTSESIVVEKVI-------TPTSET-----LEDVKLA 300
           PQTV+E EKSEIPIERIQITDVPTTSE+I+VEKVI       TPTSET      EDVKL 
Sbjct: 241 PQTVVEAEKSEIPIERIQITDVPTTSETIIVEKVIEPSPSDVTPTSETSEEKRSEDVKLP 300

Query: 301 EKVEKTEVVTVVEATPATDESNTSEKKKEEDISDVKKTETETAKDTEPKAIAPTESITKP 360
           EKVEKT+VVT+VEATPA DESNTSE KK EDISDVKKTETET K+TEPK + PTES TKP
Sbjct: 301 EKVEKTDVVTIVEATPAKDESNTSENKK-EDISDVKKTETETPKETEPKPVGPTESSTKP 357

Query: 361 AKGNDEAAKVTAEEKTT 366
           A+ NDE  KVTAEEKT+
Sbjct: 361 AQENDEVVKVTAEEKTS 357

[Close]

BLAST of Cla97C02G027010.1 vs. NCBI nr
Match: XP_004147382.1 (neurofilament medium polypeptide [Cucumis sativus] >KGN62131.1 hypothetical protein Csa_006087 [Cucumis sativus])

HSP 1 Score: 350.9 bits (899), Expect = 1.3e-92
Identity = 243/382 (63.61%), Postives = 276/382 (72.25%), Query Frame = 0


Query: 1   MGACATKPKADGSLAPAPEPEKRDVDAPV----AVEPENKVDVPAVEEVAGEGNQSDRGK 60
           MGACATKPKADG+LAPAPEPEK+DVDA V    AV+P+  V+V AV EV+GEG+QSD+GK
Sbjct: 1   MGACATKPKADGALAPAPEPEKKDVDAAVAVLDAVDPQKTVEVKAV-EVSGEGDQSDKGK 60

Query: 61  EVVDVDDDKVDDQSVKRRSLSNLFKEKEGSESIEFEKPAGETETLEAKETEIHTKEVEIK 120
           EVVDVDDDKVDDQSVKRRSLSNLFKEKEGSESI+ EKP GET      ETEI TKE++IK
Sbjct: 61  EVVDVDDDKVDDQSVKRRSLSNLFKEKEGSESIDGEKPIGET------ETEIQTKEIDIK 120

Query: 121 APQTEVETEKCTEEEAETKVPQTVVVTEEVDTKAPQTVVETEKHTEEAEKKGPETAVETK 180
           APQTEVETEKC  EE E KVPQTVVV E                                
Sbjct: 121 APQTEVETEKCI-EEPEAKVPQTVVVKE-------------------------------- 180

Query: 181 KHIEEAETKAPQTVVETEKHVEEAEAKAPQTVVETEKHVEEAEAKAPQTVVETEKHVEEA 240
           KHIEEA+ K PQT+ ETEKH EE+E K PQTVVETEK  EE E + P TVVET    +E 
Sbjct: 181 KHIEEADIKVPQTIAETEKHTEESETKLPQTVVETEKQTEEVEVEVPITVVET----KET 240

Query: 241 DTKAPQTVMEPEKSEIPIERIQITDVPTTSESIVVEKVI-------TPTSET-----LED 300
           +TKAP  V+E EKSEIP ERI++TDV TTSE+I VEKVI       TPTSET      E+
Sbjct: 241 ETKAPHPVVEIEKSEIPNERIKVTDVTTTSETITVEKVIAPSPSDVTPTSETSEEKRSEE 300

Query: 301 VKLAEKVEKTEVVTVVEATPATDESNTSEKKKEEDISDVKKTETETAKDTEPKAIAPTES 360
           VK+ EKVEK EVVT+VEATPA DES TSEKKK +D SDVKKTETET K+TEPK +APTE+
Sbjct: 301 VKVPEKVEKAEVVTLVEATPAPDESITSEKKK-DDSSDVKKTETETPKETEPKPVAPTET 337

Query: 361 ITKPAKGNDEAAKVTAEEKTTS 367
             +PA+  +E  KV+AEEK +S
Sbjct: 361 SAEPAEVKNEVVKVSAEEKISS 337

[Close]

BLAST of Cla97C02G027010.1 vs. NCBI nr
Match: XP_008460915.1 (PREDICTED: neurofilament medium polypeptide-like [Cucumis melo] >KAA0040783.1 neurofilament medium polypeptide-like [Cucumis melo var. makuwa] >TYK02099.1 neurofilament medium polypeptide-like [Cucumis melo var. makuwa])

HSP 1 Score: 323.9 bits (829), Expect = 1.7e-84
Identity = 235/380 (61.84%), Postives = 261/380 (68.68%), Query Frame = 0


Query: 1   MGACATKPKADGSLAPAPEPEKRDVDAPV-AVEPENKVDVPAVEEVAGEGNQSDRGKEVV 60
           MGACATKPKADG+LAPAPEPEK+DVDA V AVEPE  V+VPAV EV+GEG+Q D+GKEVV
Sbjct: 1   MGACATKPKADGALAPAPEPEKKDVDAVVDAVEPEKTVEVPAV-EVSGEGDQGDKGKEVV 60

Query: 61  DVDDDKVDDQSVKRRSLSNLFKEKEGSESIEFEKPAGETETLEAKETEIHTKEVEIKAPQ 120
           DVDDDKVDDQSVKRRSLSNLFKEKEGSESI+ EKP GET      ETEI TKE++IKAPQ
Sbjct: 61  DVDDDKVDDQSVKRRSLSNLFKEKEGSESIDGEKPVGET------ETEIQTKEIDIKAPQ 120

Query: 121 TEVETEKCTEEEAETKVPQTVVVTEEVDTKAPQTVVETEKHTEEAEKKGPETAVETKKHI 180
               TEKC EE                +TK PQTVVE EKHT                  
Sbjct: 121 ----TEKCIEES---------------ETKVPQTVVEAEKHT------------------ 180

Query: 181 EEAETKAPQTVVETEKHVEEAEAKAPQTVVETEKHVEEAEAKAPQTVVETEKHVEEADTK 240
           EE ETK PQTVVETEK  EEA       VV+ EK  EEAE + P+TVVET    +E +TK
Sbjct: 181 EEIETKVPQTVVETEKRTEEA-------VVQIEKQTEEAEVEVPKTVVET----KETETK 240

Query: 241 APQTVMEPEKSEIPIERIQITDVP-TTSESIVVEKVI-------TPTSET-----LEDVK 300
           AP  V+E EKSEIPIERIQITDVP TTSE+I VEKVI       TPTSET      EDVK
Sbjct: 241 APHPVVETEKSEIPIERIQITDVPTTTSETITVEKVIAPSPSDVTPTSETSEEKRSEDVK 300

Query: 301 LAEKVEKTEVVTVVEATPATDESNTSEKKKEEDISDVKKTETETAKDTEPKAIAPTESIT 360
           L EKVEK EVVT+VE  P           K++DISD KKTETET K+TEPK +APTE+  
Sbjct: 301 LPEKVEKAEVVTLVEVEP-----------KKDDISDAKKTETETPKETEPKPVAPTETSA 314

Query: 361 KPAKGNDEAAKVTAEEKTTS 367
           KPA+  DE  KV+AEEKT+S
Sbjct: 361 KPAEVKDEVVKVSAEEKTSS 314

[Close]

BLAST of Cla97C02G027010.1 vs. NCBI nr
Match: XP_023007404.1 (serine-aspartate repeat-containing protein I-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 286.6 bits (732), Expect = 3.1e-73
Identity = 224/396 (56.57%), Postives = 258/396 (65.15%), Query Frame = 0


Query: 1   MGACATKPKADGSLAPAPEPEKRDVDAPVAVEPENKVDVPAVEEVAGEGNQSDRGKEVVD 60
           MGACATKPK D    PAP PEK   +  V V+       P   E   E NQSD+GKEV  
Sbjct: 1   MGACATKPKVDSGKVPAPVPEKNVEEKDVFVD----TVAPVEAEKIFEENQSDKGKEV-- 60

Query: 61  VDDDKVDDQSVKRRSLSNLFKEKEGSESIEFEKPAGETETLEAKETEIHTKEVEIKAPQT 120
           VDDDKVDDQSVKRRSLS+LFKEKEG   +  E PAGETE LE+KETE   KE   K PQT
Sbjct: 61  VDDDKVDDQSVKRRSLSHLFKEKEGVNQL-CEGPAGETEKLESKETEKDGKESGTKVPQT 120

Query: 121 EVETEKCTEEEAETKVPQTVVVT----EEVDTKAPQTVVETEKHTEEAEKKGPETAVETK 180
           EVET+KCT +E ETKVPQTVV T    EE +TKAPQTV ETEK  EE E KG +  V+T+
Sbjct: 121 EVETQKCT-QEPETKVPQTVVETEKCVEEPETKAPQTVDETEKCIEEPETKGLQIVVKTE 180

Query: 181 KHIEEAETKAPQTVVETEKHVEEAEAKAPQTVVETEKHVEEAEAKAPQ------------ 240
           K IEE ETKAP+ VVET+K VEE E K P+TVV+ EKH EE+E KAPQ            
Sbjct: 181 KCIEEHETKAPRAVVETKKQVEEVEIKVPRTVVKPEKHAEESEVKAPQTEVETEKSEIPA 240

Query: 241 -----TVVETEKHVEEADTKAPQTVMEPEKSEIPIERIQITDVPTTSESIVVEKVI---- 300
                TVVE EKH EE++ KAPQT +E EKSEIP E+I ITDVPTTS ++  EKV     
Sbjct: 241 EKMPRTVVEPEKHAEESEVKAPQTEVETEKSEIPAEKIPITDVPTTSATVPDEKVTITSP 300

Query: 301 --------TPTSETLEDVKLAEKVEKTEVVTVVEATPATDESNTSEKKKEEDISDVKKTE 360
                   TP  +T E+VKL +KVEK E VT+VEA P   ES TSE+KK EDIS++ KTE
Sbjct: 301 SHVKPISETPVEKTSENVKLPKKVEKPEAVTLVEAAPEKHESTTSEQKK-EDISNIGKTE 360

Query: 361 TETAKDTEPKAIAPTESITKPAKGNDEAAKVTAEEK 364
            ET K          E  T+PA+ N E AKV++EEK
Sbjct: 361 METTK----------ERSTEPAQKNQE-AKVSSEEK 376

[Close]

BLAST of Cla97C02G027010.1 vs. NCBI nr
Match: XP_023532569.1 (uncharacterized protein LOC111794691 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 285.0 bits (728), Expect = 8.9e-73
Identity = 222/386 (57.51%), Postives = 258/386 (66.84%), Query Frame = 0


Query: 1   MGACATKPKADGSLAPAPEPEKRDVDAPVAVEPENKVDVPAVEEVAGEGNQSDRGKEVVD 60
           MGACATKPK D   APAP PEK   +  V V+    V+     E   E NQ D+GKEV  
Sbjct: 1   MGACATKPKVDSGKAPAPVPEKNVEEKDVFVDTVASVEA----EKTFEENQRDKGKEV-- 60

Query: 61  VDDDKVDDQSVKRRSLSNLFKEKEGSESIEFEKPAGETETLEAKETEIHTKEVEIKAPQT 120
           VDDDKVDDQSVKRRSLS LFKEKEG   +  E+PAGETE LE+ ETE   KE   K PQT
Sbjct: 61  VDDDKVDDQSVKRRSLSRLFKEKEGVNQL-CERPAGETEKLESIETEKDGKESGTKVPQT 120

Query: 121 EVETEKCTEEEAETKVPQTVVVT----EEVDTKAPQTVVETEKHTEEAEKKGPETAVETK 180
           EVET+KCT +E ETKVPQTVV T    EE +TKAPQTV ETEK  EE E KG +  V+T+
Sbjct: 121 EVETQKCT-QEPETKVPQTVVETEKCIEEPETKAPQTVDETEKCIEEPETKGLQIVVKTE 180

Query: 181 KHIEEAETKAPQTVVETEKHVEEAEAKAPQTVVETEKHVEEAEAKAPQTVVET------- 240
           K IEE  TKAP+ VVETEK VEE E K P+TVVE EKH EE+E KAPQT VET       
Sbjct: 181 KCIEEHLTKAPRAVVETEKQVEEVEIKVPRTVVEPEKHAEESEVKAPQTEVETKKSEIPA 240

Query: 241 EKHVEEADTKAPQTVMEPEKSEIPIERIQITDVPTTSESIVVEKVI------------TP 300
           EKH EE++ KAP+T +E EKSEIP E+I ITD PTTS ++  EKV             TP
Sbjct: 241 EKHAEESEVKAPRTEVETEKSEIPAEKILITDGPTTSATVPDEKVTITSPSDVEPISETP 300

Query: 301 TSETLEDVKLAEKVEKTEVVTVVEATPATDESNTSEKKKEEDISDVKKTETETAKDTEPK 360
             +T E+VKL +KVEK E VT+VEATP   ES TSE+KK EDIS++ KTE ET K     
Sbjct: 301 VEKTSENVKLPKKVEKPEAVTLVEATPEKHESTTSEQKK-EDISNIGKTEMETTK----- 360

Query: 361 AIAPTESITKPAKGNDEAAKVTAEEK 364
                E  T+PA+ N+E AK+++EEK
Sbjct: 361 -----ERSTEPAQKNEE-AKLSSEEK 366

[Close]

BLAST of Cla97C02G027010.1 vs. ExPASy TrEMBL
Match: A0A0A0LQ67 (Zonadhesin OS=Cucumis sativus OX=3659 GN=Csa_2G301490 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 6.4e-93
Identity = 243/382 (63.61%), Postives = 276/382 (72.25%), Query Frame = 0


Query: 1   MGACATKPKADGSLAPAPEPEKRDVDAPV----AVEPENKVDVPAVEEVAGEGNQSDRGK 60
           MGACATKPKADG+LAPAPEPEK+DVDA V    AV+P+  V+V AV EV+GEG+QSD+GK
Sbjct: 1   MGACATKPKADGALAPAPEPEKKDVDAAVAVLDAVDPQKTVEVKAV-EVSGEGDQSDKGK 60

Query: 61  EVVDVDDDKVDDQSVKRRSLSNLFKEKEGSESIEFEKPAGETETLEAKETEIHTKEVEIK 120
           EVVDVDDDKVDDQSVKRRSLSNLFKEKEGSESI+ EKP GET      ETEI TKE++IK
Sbjct: 61  EVVDVDDDKVDDQSVKRRSLSNLFKEKEGSESIDGEKPIGET------ETEIQTKEIDIK 120

Query: 121 APQTEVETEKCTEEEAETKVPQTVVVTEEVDTKAPQTVVETEKHTEEAEKKGPETAVETK 180
           APQTEVETEKC  EE E KVPQTVVV E                                
Sbjct: 121 APQTEVETEKCI-EEPEAKVPQTVVVKE-------------------------------- 180

Query: 181 KHIEEAETKAPQTVVETEKHVEEAEAKAPQTVVETEKHVEEAEAKAPQTVVETEKHVEEA 240
           KHIEEA+ K PQT+ ETEKH EE+E K PQTVVETEK  EE E + P TVVET    +E 
Sbjct: 181 KHIEEADIKVPQTIAETEKHTEESETKLPQTVVETEKQTEEVEVEVPITVVET----KET 240

Query: 241 DTKAPQTVMEPEKSEIPIERIQITDVPTTSESIVVEKVI-------TPTSET-----LED 300
           +TKAP  V+E EKSEIP ERI++TDV TTSE+I VEKVI       TPTSET      E+
Sbjct: 241 ETKAPHPVVEIEKSEIPNERIKVTDVTTTSETITVEKVIAPSPSDVTPTSETSEEKRSEE 300

Query: 301 VKLAEKVEKTEVVTVVEATPATDESNTSEKKKEEDISDVKKTETETAKDTEPKAIAPTES 360
           VK+ EKVEK EVVT+VEATPA DES TSEKKK +D SDVKKTETET K+TEPK +APTE+
Sbjct: 301 VKVPEKVEKAEVVTLVEATPAPDESITSEKKK-DDSSDVKKTETETPKETEPKPVAPTET 337

Query: 361 ITKPAKGNDEAAKVTAEEKTTS 367
             +PA+  +E  KV+AEEK +S
Sbjct: 361 SAEPAEVKNEVVKVSAEEKISS 337

[Close]

BLAST of Cla97C02G027010.1 vs. ExPASy TrEMBL
Match: A0A5A7TCF0 (Neurofilament medium polypeptide-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00860 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 8.4e-85
Identity = 235/380 (61.84%), Postives = 261/380 (68.68%), Query Frame = 0


Query: 1   MGACATKPKADGSLAPAPEPEKRDVDAPV-AVEPENKVDVPAVEEVAGEGNQSDRGKEVV 60
           MGACATKPKADG+LAPAPEPEK+DVDA V AVEPE  V+VPAV EV+GEG+Q D+GKEVV
Sbjct: 1   MGACATKPKADGALAPAPEPEKKDVDAVVDAVEPEKTVEVPAV-EVSGEGDQGDKGKEVV 60

Query: 61  DVDDDKVDDQSVKRRSLSNLFKEKEGSESIEFEKPAGETETLEAKETEIHTKEVEIKAPQ 120
           DVDDDKVDDQSVKRRSLSNLFKEKEGSESI+ EKP GET      ETEI TKE++IKAPQ
Sbjct: 61  DVDDDKVDDQSVKRRSLSNLFKEKEGSESIDGEKPVGET------ETEIQTKEIDIKAPQ 120

Query: 121 TEVETEKCTEEEAETKVPQTVVVTEEVDTKAPQTVVETEKHTEEAEKKGPETAVETKKHI 180
               TEKC EE                +TK PQTVVE EKHT                  
Sbjct: 121 ----TEKCIEES---------------ETKVPQTVVEAEKHT------------------ 180

Query: 181 EEAETKAPQTVVETEKHVEEAEAKAPQTVVETEKHVEEAEAKAPQTVVETEKHVEEADTK 240
           EE ETK PQTVVETEK  EEA       VV+ EK  EEAE + P+TVVET    +E +TK
Sbjct: 181 EEIETKVPQTVVETEKRTEEA-------VVQIEKQTEEAEVEVPKTVVET----KETETK 240

Query: 241 APQTVMEPEKSEIPIERIQITDVP-TTSESIVVEKVI-------TPTSET-----LEDVK 300
           AP  V+E EKSEIPIERIQITDVP TTSE+I VEKVI       TPTSET      EDVK
Sbjct: 241 APHPVVETEKSEIPIERIQITDVPTTTSETITVEKVIAPSPSDVTPTSETSEEKRSEDVK 300

Query: 301 LAEKVEKTEVVTVVEATPATDESNTSEKKKEEDISDVKKTETETAKDTEPKAIAPTESIT 360
           L EKVEK EVVT+VE  P           K++DISD KKTETET K+TEPK +APTE+  
Sbjct: 301 LPEKVEKAEVVTLVEVEP-----------KKDDISDAKKTETETPKETEPKPVAPTETSA 314

Query: 361 KPAKGNDEAAKVTAEEKTTS 367
           KPA+  DE  KV+AEEKT+S
Sbjct: 361 KPAEVKDEVVKVSAEEKTSS 314

[Close]

BLAST of Cla97C02G027010.1 vs. ExPASy TrEMBL
Match: A0A1S3CDJ8 (neurofilament medium polypeptide-like OS=Cucumis melo OX=3656 GN=LOC103499656 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 8.4e-85
Identity = 235/380 (61.84%), Postives = 261/380 (68.68%), Query Frame = 0


Query: 1   MGACATKPKADGSLAPAPEPEKRDVDAPV-AVEPENKVDVPAVEEVAGEGNQSDRGKEVV 60
           MGACATKPKADG+LAPAPEPEK+DVDA V AVEPE  V+VPAV EV+GEG+Q D+GKEVV
Sbjct: 1   MGACATKPKADGALAPAPEPEKKDVDAVVDAVEPEKTVEVPAV-EVSGEGDQGDKGKEVV 60

Query: 61  DVDDDKVDDQSVKRRSLSNLFKEKEGSESIEFEKPAGETETLEAKETEIHTKEVEIKAPQ 120
           DVDDDKVDDQSVKRRSLSNLFKEKEGSESI+ EKP GET      ETEI TKE++IKAPQ
Sbjct: 61  DVDDDKVDDQSVKRRSLSNLFKEKEGSESIDGEKPVGET------ETEIQTKEIDIKAPQ 120

Query: 121 TEVETEKCTEEEAETKVPQTVVVTEEVDTKAPQTVVETEKHTEEAEKKGPETAVETKKHI 180
               TEKC EE                +TK PQTVVE EKHT                  
Sbjct: 121 ----TEKCIEES---------------ETKVPQTVVEAEKHT------------------ 180

Query: 181 EEAETKAPQTVVETEKHVEEAEAKAPQTVVETEKHVEEAEAKAPQTVVETEKHVEEADTK 240
           EE ETK PQTVVETEK  EEA       VV+ EK  EEAE + P+TVVET    +E +TK
Sbjct: 181 EEIETKVPQTVVETEKRTEEA-------VVQIEKQTEEAEVEVPKTVVET----KETETK 240

Query: 241 APQTVMEPEKSEIPIERIQITDVP-TTSESIVVEKVI-------TPTSET-----LEDVK 300
           AP  V+E EKSEIPIERIQITDVP TTSE+I VEKVI       TPTSET      EDVK
Sbjct: 241 APHPVVETEKSEIPIERIQITDVPTTTSETITVEKVIAPSPSDVTPTSETSEEKRSEDVK 300

Query: 301 LAEKVEKTEVVTVVEATPATDESNTSEKKKEEDISDVKKTETETAKDTEPKAIAPTESIT 360
           L EKVEK EVVT+VE  P           K++DISD KKTETET K+TEPK +APTE+  
Sbjct: 301 LPEKVEKAEVVTLVEVEP-----------KKDDISDAKKTETETPKETEPKPVAPTETSA 314

Query: 361 KPAKGNDEAAKVTAEEKTTS 367
           KPA+  DE  KV+AEEKT+S
Sbjct: 361 KPAEVKDEVVKVSAEEKTSS 314

[Close]

BLAST of Cla97C02G027010.1 vs. ExPASy TrEMBL
Match: A0A6J1L4V0 (serine-aspartate repeat-containing protein I-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499910 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 1.5e-73
Identity = 224/396 (56.57%), Postives = 258/396 (65.15%), Query Frame = 0


Query: 1   MGACATKPKADGSLAPAPEPEKRDVDAPVAVEPENKVDVPAVEEVAGEGNQSDRGKEVVD 60
           MGACATKPK D    PAP PEK   +  V V+       P   E   E NQSD+GKEV  
Sbjct: 1   MGACATKPKVDSGKVPAPVPEKNVEEKDVFVD----TVAPVEAEKIFEENQSDKGKEV-- 60

Query: 61  VDDDKVDDQSVKRRSLSNLFKEKEGSESIEFEKPAGETETLEAKETEIHTKEVEIKAPQT 120
           VDDDKVDDQSVKRRSLS+LFKEKEG   +  E PAGETE LE+KETE   KE   K PQT
Sbjct: 61  VDDDKVDDQSVKRRSLSHLFKEKEGVNQL-CEGPAGETEKLESKETEKDGKESGTKVPQT 120

Query: 121 EVETEKCTEEEAETKVPQTVVVT----EEVDTKAPQTVVETEKHTEEAEKKGPETAVETK 180
           EVET+KCT +E ETKVPQTVV T    EE +TKAPQTV ETEK  EE E KG +  V+T+
Sbjct: 121 EVETQKCT-QEPETKVPQTVVETEKCVEEPETKAPQTVDETEKCIEEPETKGLQIVVKTE 180

Query: 181 KHIEEAETKAPQTVVETEKHVEEAEAKAPQTVVETEKHVEEAEAKAPQ------------ 240
           K IEE ETKAP+ VVET+K VEE E K P+TVV+ EKH EE+E KAPQ            
Sbjct: 181 KCIEEHETKAPRAVVETKKQVEEVEIKVPRTVVKPEKHAEESEVKAPQTEVETEKSEIPA 240

Query: 241 -----TVVETEKHVEEADTKAPQTVMEPEKSEIPIERIQITDVPTTSESIVVEKVI---- 300
                TVVE EKH EE++ KAPQT +E EKSEIP E+I ITDVPTTS ++  EKV     
Sbjct: 241 EKMPRTVVEPEKHAEESEVKAPQTEVETEKSEIPAEKIPITDVPTTSATVPDEKVTITSP 300

Query: 301 --------TPTSETLEDVKLAEKVEKTEVVTVVEATPATDESNTSEKKKEEDISDVKKTE 360
                   TP  +T E+VKL +KVEK E VT+VEA P   ES TSE+KK EDIS++ KTE
Sbjct: 301 SHVKPISETPVEKTSENVKLPKKVEKPEAVTLVEAAPEKHESTTSEQKK-EDISNIGKTE 360

Query: 361 TETAKDTEPKAIAPTESITKPAKGNDEAAKVTAEEK 364
            ET K          E  T+PA+ N E AKV++EEK
Sbjct: 361 METTK----------ERSTEPAQKNQE-AKVSSEEK 376

[Close]

BLAST of Cla97C02G027010.1 vs. ExPASy TrEMBL
Match: A0A6J1L7K1 (neurofilament heavy polypeptide-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499910 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 1.8e-71
Identity = 227/420 (54.05%), Postives = 258/420 (61.43%), Query Frame = 0


Query: 1   MGACATKPKADGSLAPAPEPEKRDVDAPVAVEPENKVDVPAVEEVAGEGNQSDRGKEVVD 60
           MGACATKPK D    PAP PEK   +  V V+       P   E   E NQSD+GKEV  
Sbjct: 1   MGACATKPKVDSGKVPAPVPEKNVEEKDVFVD----TVAPVEAEKIFEENQSDKGKEV-- 60

Query: 61  VDDDKVDDQSVKRRSLSNLFKEKEGSESIEFEKPAGETETLEAKETEIHTKEVEIKAPQT 120
           VDDDKVDDQSVKRRSLS+LFKEKEG   +  E PAGETE LE+KETE   KE   K PQT
Sbjct: 61  VDDDKVDDQSVKRRSLSHLFKEKEGVNQL-CEGPAGETEKLESKETEKDGKESGTKVPQT 120

Query: 121 EVETEKCTEEEAETKVPQTVVVT----EEVDTKAPQTVVETEKHTEEAEKKG-------- 180
           EVET+KCT +E ETKVPQTVV T    EE +TKAPQTV ETEK  EE E KG        
Sbjct: 121 EVETQKCT-QEPETKVPQTVVETEKCVEEPETKAPQTVDETEKCIEEPETKGLQIVVKTE 180

Query: 181 ----------PETAVETKKHIEEAETKAPQTVVETEKHVEEAEAKAPQTVVET------E 240
                     P   VETKK +EE E K P+TVV+ EKH EE+E KAPQT VET      E
Sbjct: 181 KCIEEHETKAPRAVVETKKQVEEVEIKVPRTVVKPEKHAEESEVKAPQTEVETEKSVPAE 240

Query: 241 KHVEEAEAKAPQ-----------------TVVETEKHVEEADTKAPQTVMEPEKSEIPIE 300
           KH EE+E KAPQ                 TVVE EKH EE++ KAPQT +E EKSEIP E
Sbjct: 241 KHAEESEVKAPQTEVETEKSEIPAEKMPRTVVEPEKHAEESEVKAPQTEVETEKSEIPAE 300

Query: 301 RIQITDVPTTSESIVVEKVI------------TPTSETLEDVKLAEKVEKTEVVTVVEAT 360
           +I ITDVPTTS ++  EKV             TP  +T E+VKL +KVEK E VT+VEA 
Sbjct: 301 KIPITDVPTTSATVPDEKVTITSPSHVKPISETPVEKTSENVKLPKKVEKPEAVTLVEAA 360

Query: 361 PATDESNTSEKKKEEDISDVKKTETETAKDTEPKAIAPTESITKPAKGNDEAAKVTAEEK 364
           P   ES TSE+KK EDIS++ KTE ET K          E  T+PA+ N E AKV++EEK
Sbjct: 361 PEKHESTTSEQKK-EDISNIGKTEMETTK----------ERSTEPAQKNQE-AKVSSEEK 400

The following BLAST results are available for this feature:

BLAST of Cla97C02G027010.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902634.1	4.5e-125	76.13	probable serine/threonine-protein kinase kinX [Benincasa hispida]	[more]
XP_004147382.1	1.3e-92	63.61	neurofilament medium polypeptide [Cucumis sativus] >KGN62131.1 hypothetical prot...	[more]
XP_008460915.1	1.7e-84	61.84	PREDICTED: neurofilament medium polypeptide-like [Cucumis melo] >KAA0040783.1 ne...	[more]
XP_023007404.1	3.1e-73	56.57	serine-aspartate repeat-containing protein I-like isoform X2 [Cucurbita maxima]	[more]
XP_023532569.1	8.9e-73	57.51	uncharacterized protein LOC111794691 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cla97C02G027010.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cla97C02G027010.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQ67	6.4e-93	63.61	Zonadhesin OS=Cucumis sativus OX=3659 GN=Csa_2G301490 PE=4 SV=1	[more]
A0A5A7TCF0	8.4e-85	61.84	Neurofilament medium polypeptide-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3CDJ8	8.4e-85	61.84	neurofilament medium polypeptide-like OS=Cucumis melo OX=3656 GN=LOC103499656 PE...	[more]
A0A6J1L4V0	1.5e-73	56.57	serine-aspartate repeat-containing protein I-like isoform X2 OS=Cucurbita maxima...	[more]
A0A6J1L7K1	1.8e-71	54.05	neurofilament heavy polypeptide-like isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Cla97C02G027010.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 301..366
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 308..336
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..133

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla97C02G027010	Cla97C02G027010	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C02G027010.1-exon	Cla97C02G027010.1-exon-Cla97Chr02:706709..706954	exon
Cla97C02G027010.1-exon	Cla97C02G027010.1-exon-Cla97Chr02:708615..709469	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C02G027010.1-cds	Cla97C02G027010.1-cds-Cla97Chr02:706709..706954	CDS
Cla97C02G027010.1-cds	Cla97C02G027010.1-cds-Cla97Chr02:708615..709469	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla97C02G027010.1	Cla97C02G027010.1-protein	polypeptide