Cla97C02G026730.2 (mRNA) Watermelon (97103) v2.5

Overview


Name	Cla97C02G026730.2
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	MYB transcription factor
Location	Cla97Chr02: 472671 .. 475580 (-)
Sequence length	1131
RNA-Seq Expression	Cla97C02G026730.2
Synteny	Cla97C02G026730.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACTATTACAAAGCCAGCCCATTTACCTAATTAGATCACAAAATGCCTTATAATGGGATCTGTTCTATGTTCTTATAATACAAAACAAATGAAGCCTTGAAGAACCAAAATAAATGAAATAAAGCTGTTTTGTTGGTGTTTTTTCAAATCTCCCAATGCAATTCTCAAATCCCATTTCACAATCTTTTCTTCTTCAATAATAAACTTTCTTTTAACCTCTCTTTCCTTCTGAGGGTTTTTAGGGTTGGATTTTCAGAATGATGAGATCAAGAAGTAGCAGTAGTAGTGGCGGCAGTAGCGGTGGCGGTGGCGGAAGCAGCGGTGTTAGCTGCTACCGAGGCCACTGGCGGCCGGCGGAGGACAATAAACTCCGGCAGCTCGTTGAACAATTTGGCCCTCAAAACTGGAATTACATTGCAGAACACTTTGAAGGCAGATCTGGTAACATTCATTTCATATCCCAATCTCAGCTTTAGGATTTTAGGTCATTTTCTTGGGGTTTTGAATAACATATTTTCACAATGATATAGTTCATGTATTTTTTTTTTTTTATAAAGATTTAGTTTCTATAATTTAAAATTTATTATGATTTAGTTAAAGATTTCGTTAAGAAAAAAATAAATTCTCACTTAGATTGACAGTTTTTCACACCAGATCAACTTTGGAAATACGATCAAAGTCTCACATTGGTTGGATGAGAGGATGATCGTAAGTTTATAAGATCTTTTAGGTGAAACGAAAAGCAAGATCTCATTAGAATTTATGCTTAAAATTGACAATATAGTACCAATGTAAAAATATTTGGAGGTTGGTTGATTAGGAGGCAAAGTTTTATAACATTCTAAACCCTTTTTATGAATGATCTCTCAATCTTGAAAAGCAATTAAGGAAAAGCTAGAGAAAATAAAAGCTTTAATTAAGATCTTAAAATTTGTAATAAAAATTCCTTAATCTCAAATTCTTCCTTCTTCACATCTCCTCTGGGAGACCAAGTTATTATATGTGTTTTTTTTTTTTTTCCTCCTTTGAAGAGGGGACAAAGTGTTCTTAATTAAACCATAAATATAAAAATTTAAAACTACAATGACTAGGACTAGGGATGGTTAATTTCCACGAAAGGTTTTTCCAATCATTAATTACATGATTACAAAGCTCAAATAATTTCATAAATATATAAAAGTAGAAAGACTAAAATAAACGTTTTTGTTCGATAGGAAAAAGCTGTAGATTGAGATGGTACAATCAACTAGATCCAAATATAAACAAGAACCCATTTAGTGAGGAAGAAGAAGAGAGGCTTTTAATGTTTCAACAGCTTCATGGGAACAAATGGGCATTAATAGCTAGACACTTCAAAGGAAGAACAGACAATGCAGTGAAGAATCATTACCATGTAATAATGGCTAGAAGAAGAAGAGAACGCTTCACAATATTCACTAATCACAACAACAATAATAACAACATTCTAAGGACCCGCCATAGCTTACTACCCTTTTCAAAGACCACGGCCGTCAAATGGACTCCTCTTACAGCCGCTCCGCCCGTGGTGCTCGGAAATGGCCGCGGAAAGTCATCTTTGCCAGCTGTAGTTGCGTCGGGCTCCGGTGAGACCGAGGATCACAAGAGGAGGATTCCATTCATAGACTTTCTTGGCATGGGAAGCTCTTAGTTTAGCAAAGTTCAAATTTTTTCTTATGGTGTGTGAGTTTCTTCTTGGTTGTCAAATGTTTTGATATGTTAGGAGAAATTATGAATTGCCAAGTATATTGTAAGAGAAAAATTATTGTCCATTCACCTTTTTTGCTAATAAACTTTTTTTTTTTTTTTTTTGAGTTTTTAAACTTAGAATCTCGAAAAAATACGAATAAGGCTTAGTTTGAGATTGTTGTAGATTTTTAATATGGAAAAAATAAAAAGCTAAAGGAAGTAAAATAACTTATTATTTTAATTATTTTCACATTGATAATTAATTTATAATTTATTATAATACATTTTTTTAAAATTTTATATGATTTGAATTTTAACTAATTTTGTTTAATCTAAATTATTTGATACAAATTTTTAAAAAATAATTGTTATAAAATATTGAATCAAATAGAATTTAAAAATATATGCGAAATATATATTAATATGGAAAAATATTGTTATATTATATATATTTAAATAGTTAAGGAAGTAGTAGCAAAATCTAAAAGTTATTACTATTAGCGTGTACACGTGAGTCAAAATTAAAAAGTGATTCTAATAGATTAATTAATAATTTGATTTACCAAACAAGTAAAACAGTTAAGATTTTCCCAAAATCACTTTTAACATAACCTAAATCTATTGACACTATAAATTATATGCACATGTTAAAGTTGTTTTAAGTTGACTACGCATTCTTAGCTACTAAAATCAAAACGATTATTAGAAAATAGTAATTAAATTGCTTGTAAATGTTTTTATTCTAGAAATTAAAAATTATTTAAGGTCGGTTTGGTAAAAAGTTTAAATCCAGATTTATGTTTTAAAAAATTATTTCTCGTTCTTTTTCATTTTCCACATTCCACATGGCTCACTAGTGACCTTGCTACCCTCCCTAGACCAAGCTTTACAATTTTAGTATGTTCTTTTTATTGTCATCGCTTCAATTAATCTATACCTCCTTGCAACAAGGAATGAACTTGAAGGCAATGAGACCAAACACGTCCTAAGTGGTCTCCAAGCAACTAATCTAGTCCACCTGAAAGAGATAGGGCTCCAAGGAACAAATCTACTAAGGGACTTCCAAAGTGTGGATGTAGTGGAAAAAGAGACTTTCTCCCACATGCGCTTTACACGCATGTCTATTATTATTTTCTTAAACCTGATTTTGGATGATATATAGGTGAGTTTGTCTTATTTTCATTGACAAAAATAATTAGATGC

mRNA sequence

TACTATTACAAAGCCAGCCCATTTACCTAATTAGATCACAAAATGCCTTATAATGGGATCTGTTCTATGTTCTTATAATACAAAACAAATGAAGCCTTGAAGAACCAAAATAAATGAAATAAAGCTGTTTTGTTGGTGTTTTTTCAAATCTCCCAATGCAATTCTCAAATCCCATTTCACAATCTTTTCTTCTTCAATAATAAACTTTCTTTTAACCTCTCTTTCCTTCTGAGGGTTTTTAGGGTTGGATTTTCAGAATGATGAGATCAAGAAGTAGCAGTAGTAGTGGCGGCAGTAGCGGTGGCGGTGGCGGAAGCAGCGGTGTTAGCTGCTACCGAGGCCACTGGCGGCCGGCGGAGGACAATAAACTCCGGCAGCTCGTTGAACAATTTGGCCCTCAAAACTGGAATTACATTGCAGAACACTTTGAAGGCAGATCTGGAAAAAGCTGTAGATTGAGATGGTACAATCAACTAGATCCAAATATAAACAAGAACCCATTTAGTGAGGAAGAAGAAGAGAGGCTTTTAATGTTTCAACAGCTTCATGGGAACAAATGGGCATTAATAGCTAGACACTTCAAAGGAAGAACAGACAATGCAGTGAAGAATCATTACCATGTAATAATGGCTAGAAGAAGAAGAGAACGCTTCACAATATTCACTAATCACAACAACAATAATAACAACATTCTAAGGACCCGCCATAGCTTACTACCCTTTTCAAAGACCACGGCCGTCAAATGGACTCCTCTTACAGCCGCTCCGCCCGTGGTGCTCGGAAATGGCCGCGGAAAGTCATCTTTGCCAGCTGTAGTTGCGTCGGGCTCCGGTGAGACCGAGGATCACAAGAGGAGGATTCCATTCATAGACTTTCTTGGAATGAACTTGAAGGCAATGAGACCAAACACGTCCTAAGTGGTCTCCAAGCAACTAATCTAGTCCACCTGAAAGAGATAGGGCTCCAAGGAACAAATCTACTAAGGGACTTCCAAAGTGTGGATGTAGTGGAAAAAGAGACTTTCTCCCACATGCGCTTTACACGCATGTCTATTATTATTTTCTTAAACCTGATTTTGGATGATATATAGGTGAGTTTGTCTTATTTTCATTGACAAAAATAATTAGATGC

Coding sequence (CDS)

ATGATGAGATCAAGAAGTAGCAGTAGTAGTGGCGGCAGTAGCGGTGGCGGTGGCGGAAGCAGCGGTGTTAGCTGCTACCGAGGCCACTGGCGGCCGGCGGAGGACAATAAACTCCGGCAGCTCGTTGAACAATTTGGCCCTCAAAACTGGAATTACATTGCAGAACACTTTGAAGGCAGATCTGGAAAAAGCTGTAGATTGAGATGGTACAATCAACTAGATCCAAATATAAACAAGAACCCATTTAGTGAGGAAGAAGAAGAGAGGCTTTTAATGTTTCAACAGCTTCATGGGAACAAATGGGCATTAATAGCTAGACACTTCAAAGGAAGAACAGACAATGCAGTGAAGAATCATTACCATGTAATAATGGCTAGAAGAAGAAGAGAACGCTTCACAATATTCACTAATCACAACAACAATAATAACAACATTCTAAGGACCCGCCATAGCTTACTACCCTTTTCAAAGACCACGGCCGTCAAATGGACTCCTCTTACAGCCGCTCCGCCCGTGGTGCTCGGAAATGGCCGCGGAAAGTCATCTTTGCCAGCTGTAGTTGCGTCGGGCTCCGGTGAGACCGAGGATCACAAGAGGAGGATTCCATTCATAGACTTTCTTGGAATGAACTTGAAGGCAATGAGACCAAACACGTCCTAA

Protein sequence

MMRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIMARRRRERFTIFTNHNNNNNNILRTRHSLLPFSKTTAVKWTPLTAAPPVVLGNGRGKSSLPAVVASGSGETEDHKRRIPFIDFLGMNLKAMRPNTS

Homology

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BLAST of Cla97C02G026730.2 vs. NCBI nr
Match: XP_004147366.1 (transcription factor MYB52 [Cucumis sativus] >KGN62164.1 hypothetical protein Csa_006344 [Cucumis sativus])

HSP 1 Score: 393.3 bits (1009), Expect = 1.4e-105
Identity = 198/210 (94.29%), Postives = 200/210 (95.24%), Query Frame = 0


Query: 1   MMRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGR 60
           MMRS+SSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGR
Sbjct: 1   MMRSKSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGR 60

Query: 61  SGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHY 120
           SGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHY
Sbjct: 61  SGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHY 120

Query: 121 HVIMARRRRERFTIFTNHNNNNNNILRTRHSLLPFSKTT-AVKWTPLTAAPPVVLGNGRG 180
           HVIMARRRRERFTIFTNHN NNN I   RHSLL FSKTT AVKWTPLTA  PV+LGNGRG
Sbjct: 121 HVIMARRRRERFTIFTNHNKNNNTI---RHSLLSFSKTTAAVKWTPLTAGAPVLLGNGRG 180

Query: 181 KSSLPAVVASGSGETEDHKRRIPFIDFLGM 210
           KSSLPAVVASGSGE EDHKRRIPFIDFLGM
Sbjct: 181 KSSLPAVVASGSGEGEDHKRRIPFIDFLGM 207

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BLAST of Cla97C02G026730.2 vs. NCBI nr
Match: KAA0040758.1 (transcriptional activator Myb [Cucumis melo var. makuwa] >TYK02073.1 transcriptional activator Myb [Cucumis melo var. makuwa])

HSP 1 Score: 391.3 bits (1004), Expect = 5.3e-105
Identity = 198/210 (94.29%), Postives = 199/210 (94.76%), Query Frame = 0


Query: 1   MMRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGR 60
           MMRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGR
Sbjct: 1   MMRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGR 60

Query: 61  SGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHY 120
           SGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHY
Sbjct: 61  SGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHY 120

Query: 121 HVIMARRRRERFTIFTNHNNNNNNILRTRHSLLPFSK-TTAVKWTPLTAAPPVVLGNGRG 180
           HVIMARRRRERFTIFTNHN NNN I   RHSLL FSK TTAVKWTPLTA  PV+LGNGRG
Sbjct: 121 HVIMARRRRERFTIFTNHNKNNNTI---RHSLLSFSKMTTAVKWTPLTAGAPVLLGNGRG 180

Query: 181 KSSLPAVVASGSGETEDHKRRIPFIDFLGM 210
           KSSL AVVASGSGE EDHKRRIPFIDFLGM
Sbjct: 181 KSSLTAVVASGSGEGEDHKRRIPFIDFLGM 207

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BLAST of Cla97C02G026730.2 vs. NCBI nr
Match: XP_008460890.2 (PREDICTED: transcriptional activator Myb [Cucumis melo])

HSP 1 Score: 389.0 bits (998), Expect = 2.6e-104
Identity = 197/209 (94.26%), Postives = 198/209 (94.74%), Query Frame = 0


Query: 2   MRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRS 61
           MRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRS
Sbjct: 1   MRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRS 60

Query: 62  GKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYH 121
           GKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYH
Sbjct: 61  GKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYH 120

Query: 122 VIMARRRRERFTIFTNHNNNNNNILRTRHSLLPFSK-TTAVKWTPLTAAPPVVLGNGRGK 181
           VIMARRRRERFTIFTNHN NNN I   RHSLL FSK TTAVKWTPLTA  PV+LGNGRGK
Sbjct: 121 VIMARRRRERFTIFTNHNKNNNTI---RHSLLSFSKMTTAVKWTPLTAGAPVLLGNGRGK 180

Query: 182 SSLPAVVASGSGETEDHKRRIPFIDFLGM 210
           SSL AVVASGSGE EDHKRRIPFIDFLGM
Sbjct: 181 SSLTAVVASGSGEGEDHKRRIPFIDFLGM 206

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BLAST of Cla97C02G026730.2 vs. NCBI nr
Match: XP_038902736.1 (transcription factor MYB52-like [Benincasa hispida] >XP_038902737.1 transcription factor MYB52-like [Benincasa hispida])

HSP 1 Score: 389.0 bits (998), Expect = 2.6e-104
Identity = 193/209 (92.34%), Postives = 198/209 (94.74%), Query Frame = 0


Query: 1   MMRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGR 60
           MMRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGR
Sbjct: 1   MMRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGR 60

Query: 61  SGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHY 120
           SGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHY
Sbjct: 61  SGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHY 120

Query: 121 HVIMARRRRERFTIFTNHNNNNNNILRTRHSLLPFSKTTAVKWTPLTAAPPVVLGNGRGK 180
           HVIMARRRRERFTIFTN+NN N   LR RHSLLPFSKTTA+KWTPLTA  PV+LGNGRGK
Sbjct: 121 HVIMARRRRERFTIFTNNNNIN---LRNRHSLLPFSKTTAIKWTPLTATAPVLLGNGRGK 180

Query: 181 SSLPAVVASGSGETEDHKRRIPFIDFLGM 210
           SSLP  VASGS E++D KRRIPFIDFLGM
Sbjct: 181 SSLPTAVASGSSESDDQKRRIPFIDFLGM 206

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BLAST of Cla97C02G026730.2 vs. NCBI nr
Match: KAG6571346.1 (Transcription factor MYB52, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 347.4 bits (890), Expect = 8.8e-92
Identity = 182/219 (83.11%), Postives = 188/219 (85.84%), Query Frame = 0


Query: 1   MMRSRSSS---SSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHF 60
           MMRSRSSS   SSGG  GGG G+S VSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHF
Sbjct: 1   MMRSRSSSSGGSSGGVGGGGCGNSSVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHF 60

Query: 61  EGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK 120
           EGRSGKSCRLRWYNQLDPNINKNPF+EEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK
Sbjct: 61  EGRSGKSCRLRWYNQLDPNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK 120

Query: 121 NHYHVIMARRRRERFTIFTNHNNNNNNILRTRHSLLPFSKT-------TAVKWTPLTAAP 180
           NHYHVIMARRRRERFTIFTNH NNNNNILRTRHSLLPFSK        TAVKWTPL A  
Sbjct: 121 NHYHVIMARRRRERFTIFTNH-NNNNNILRTRHSLLPFSKVLQSSQQKTAVKWTPLMAT- 180

Query: 181 PVVLGNGRGKSSLPAVVASGSGETEDHKRRIPFIDFLGM 210
             VL +G G S+  A V SGS E E+ KRR+PFIDFLGM
Sbjct: 181 -TVLRHGGGMSAPTAAVVSGSDEREEQKRRVPFIDFLGM 216

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BLAST of Cla97C02G026730.2 vs. ExPASy Swiss-Prot
Match: Q6R0C4 (Transcription factor MYB52 OS=Arabidopsis thaliana OX=3702 GN=MYB52 PE=2 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 9.9e-46
Identity = 82/107 (76.64%), Postives = 93/107 (86.92%), Query Frame = 0


Query: 25  CYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSE 84
           C RGHWRPAED KLR+LVEQFGP NWN IA+   GRSGKSCRLRW+NQLDP IN+NPF+E
Sbjct: 3   CSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPFTE 62

Query: 85  EEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIMARRRRER 132
           EEEERLL   ++HGN+W++IAR F GRTDNAVKNH+HVIMARR RER
Sbjct: 63  EEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRER 109

[Close]

BLAST of Cla97C02G026730.2 vs. ExPASy Swiss-Prot
Match: Q9FX36 (Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=1 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.6e-43
Identity = 78/108 (72.22%), Postives = 91/108 (84.26%), Query Frame = 0


Query: 23  VSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPF 82
           + C RGHWRPAED KL+ LVEQ+GP NWN IA    GRSGKSCRLRW+NQLDP IN+NPF
Sbjct: 2   IMCSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNPF 61

Query: 83  SEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIMARRRRE 131
           +EEEEERLL   ++HGN+W++IAR F GRTDNAVKNH+HVIMARR R+
Sbjct: 62  TEEEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTRQ 109

[Close]

BLAST of Cla97C02G026730.2 vs. ExPASy Swiss-Prot
Match: Q5NBM8 (Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV=2)

HSP 1 Score: 176.4 bits (446), Expect = 3.5e-43
Identity = 84/130 (64.62%), Postives = 100/130 (76.92%), Query Frame = 0


Query: 15  GGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLD 74
           G GGG  G  C RGHWRPAED KL+ LV Q+GPQNWN IAE  +GRSGKSCRLRW+NQLD
Sbjct: 37  GHGGGVQGKLCARGHWRPAEDAKLKDLVAQYGPQNWNLIAEKLDGRSGKSCRLRWFNQLD 96

Query: 75  PNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIMARRRRERFTI 134
           P IN+  F+EEEEERL+   + +GNKWALIAR F GRTDNAVKNH+HV+MARR RE+   
Sbjct: 97  PRINRRAFTEEEEERLMAAHRAYGNKWALIARLFPGRTDNAVKNHWHVLMARRHREQSGA 156

Query: 135 FTNHNNNNNN 145
           F     ++++
Sbjct: 157 FRRRKPSSSS 166

[Close]

BLAST of Cla97C02G026730.2 vs. ExPASy Swiss-Prot
Match: Q6R053 (Transcription factor MYB56 OS=Arabidopsis thaliana OX=3702 GN=MYB56 PE=1 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 6.6e-42
Identity = 81/115 (70.43%), Postives = 92/115 (80.00%), Query Frame = 0


Query: 19  GSSGVS---CYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDP 78
           G SG++   C RGHWRP ED KL++LV QFGPQNWN I+ H  GRSGKSCRLRW+NQLDP
Sbjct: 82  GKSGINTKVCSRGHWRPTEDAKLKELVAQFGPQNWNLISNHLLGRSGKSCRLRWFNQLDP 141

Query: 79  NINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIMARRRRE 131
            INK  F+EEEE RLL   + +GNKWALI+R F GRTDNAVKNH+HVIMARR RE
Sbjct: 142 RINKRAFTEEEEFRLLAAHRAYGNKWALISRLFPGRTDNAVKNHWHVIMARRTRE 196

[Close]

BLAST of Cla97C02G026730.2 vs. ExPASy Swiss-Prot
Match: Q9SEZ4 (Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.1e-41
Identity = 79/114 (69.30%), Postives = 94/114 (82.46%), Query Frame = 0


Query: 18  GGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNI 77
           G SS  S  RGHWRPAED KL++LV  +GPQNWN IAE  +GRSGKSCRLRW+NQLDP I
Sbjct: 98  GHSSKASVSRGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRI 157

Query: 78  NKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIMARRRRER 132
           N+  F+EEEEERL+   +L+GNKWA+IAR F GRTDN+VKNH+HVIMAR+ RE+
Sbjct: 158 NRRAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMARKFREQ 211

[Close]

BLAST of Cla97C02G026730.2 vs. ExPASy TrEMBL
Match: A0A0A0LM98 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G302300 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 6.8e-106
Identity = 198/210 (94.29%), Postives = 200/210 (95.24%), Query Frame = 0


Query: 1   MMRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGR 60
           MMRS+SSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGR
Sbjct: 1   MMRSKSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGR 60

Query: 61  SGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHY 120
           SGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHY
Sbjct: 61  SGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHY 120

Query: 121 HVIMARRRRERFTIFTNHNNNNNNILRTRHSLLPFSKTT-AVKWTPLTAAPPVVLGNGRG 180
           HVIMARRRRERFTIFTNHN NNN I   RHSLL FSKTT AVKWTPLTA  PV+LGNGRG
Sbjct: 121 HVIMARRRRERFTIFTNHNKNNNTI---RHSLLSFSKTTAAVKWTPLTAGAPVLLGNGRG 180

Query: 181 KSSLPAVVASGSGETEDHKRRIPFIDFLGM 210
           KSSLPAVVASGSGE EDHKRRIPFIDFLGM
Sbjct: 181 KSSLPAVVASGSGEGEDHKRRIPFIDFLGM 207

[Close]

BLAST of Cla97C02G026730.2 vs. ExPASy TrEMBL
Match: A0A5D3BQW6 (Transcriptional activator Myb OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00600 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 2.6e-105
Identity = 198/210 (94.29%), Postives = 199/210 (94.76%), Query Frame = 0


Query: 1   MMRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGR 60
           MMRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGR
Sbjct: 1   MMRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGR 60

Query: 61  SGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHY 120
           SGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHY
Sbjct: 61  SGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHY 120

Query: 121 HVIMARRRRERFTIFTNHNNNNNNILRTRHSLLPFSK-TTAVKWTPLTAAPPVVLGNGRG 180
           HVIMARRRRERFTIFTNHN NNN I   RHSLL FSK TTAVKWTPLTA  PV+LGNGRG
Sbjct: 121 HVIMARRRRERFTIFTNHNKNNNTI---RHSLLSFSKMTTAVKWTPLTAGAPVLLGNGRG 180

Query: 181 KSSLPAVVASGSGETEDHKRRIPFIDFLGM 210
           KSSL AVVASGSGE EDHKRRIPFIDFLGM
Sbjct: 181 KSSLTAVVASGSGEGEDHKRRIPFIDFLGM 207

[Close]

BLAST of Cla97C02G026730.2 vs. ExPASy TrEMBL
Match: A0A1S3CEN7 (transcriptional activator Myb OS=Cucumis melo OX=3656 GN=LOC103499632 PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 1.3e-104
Identity = 197/209 (94.26%), Postives = 198/209 (94.74%), Query Frame = 0


Query: 2   MRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRS 61
           MRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRS
Sbjct: 1   MRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRS 60

Query: 62  GKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYH 121
           GKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYH
Sbjct: 61  GKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYH 120

Query: 122 VIMARRRRERFTIFTNHNNNNNNILRTRHSLLPFSK-TTAVKWTPLTAAPPVVLGNGRGK 181
           VIMARRRRERFTIFTNHN NNN I   RHSLL FSK TTAVKWTPLTA  PV+LGNGRGK
Sbjct: 121 VIMARRRRERFTIFTNHNKNNNTI---RHSLLSFSKMTTAVKWTPLTAGAPVLLGNGRGK 180

Query: 182 SSLPAVVASGSGETEDHKRRIPFIDFLGM 210
           SSL AVVASGSGE EDHKRRIPFIDFLGM
Sbjct: 181 SSLTAVVASGSGEGEDHKRRIPFIDFLGM 206

[Close]

BLAST of Cla97C02G026730.2 vs. ExPASy TrEMBL
Match: A0A6J1EVU5 (transcription factor CSA-like OS=Cucurbita moschata OX=3662 GN=LOC111438332 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 1.0e-90
Identity = 180/219 (82.19%), Postives = 186/219 (84.93%), Query Frame = 0


Query: 1   MMRSRSSS---SSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHF 60
           MMRSRSSS   SSGG  GGG G+S VSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHF
Sbjct: 1   MMRSRSSSSGGSSGGVGGGGCGNSSVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHF 60

Query: 61  EGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK 120
           EGRSGKSCRLRWYNQLDPNINKNPF+EEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK
Sbjct: 61  EGRSGKSCRLRWYNQLDPNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK 120

Query: 121 NHYHVIMARRRRERFTIFTNHNNNNNNILRTRHSLLPFSKT-------TAVKWTPLTAAP 180
           NHYHVIMARRRRERFTIFTNH  NNNNILRTRHSLLPFSK        TAVKWTPL A  
Sbjct: 121 NHYHVIMARRRRERFTIFTNH--NNNNILRTRHSLLPFSKVLQSSQQKTAVKWTPLMAT- 180

Query: 181 PVVLGNGRGKSSLPAVVASGSGETEDHKRRIPFIDFLGM 210
             VL +G G  +  A V SGS E E+ KRR+PFIDFLGM
Sbjct: 181 -TVLRHGGGMLAPTAAVVSGSDEREEQKRRVPFIDFLGM 215

[Close]

BLAST of Cla97C02G026730.2 vs. ExPASy TrEMBL
Match: A0A6J1I2H4 (transcription factor CSA-like OS=Cucurbita maxima OX=3661 GN=LOC111470309 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 4.0e-90
Identity = 179/219 (81.74%), Postives = 185/219 (84.47%), Query Frame = 0


Query: 1   MMRSRSSS---SSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHF 60
           MMRSRSSS   SSGG  GGG G+S VSCYRGHWRPAEDNKLRQLVEQ GPQNWNYIAEHF
Sbjct: 1   MMRSRSSSSGGSSGGVGGGGCGNSSVSCYRGHWRPAEDNKLRQLVEQLGPQNWNYIAEHF 60

Query: 61  EGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK 120
           EGRSGKSCRLRWYNQLDPNINKNPF+EEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK
Sbjct: 61  EGRSGKSCRLRWYNQLDPNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK 120

Query: 121 NHYHVIMARRRRERFTIFTNHNNNNNNILRTRHSLLPFSKT-------TAVKWTPLTAAP 180
           NHYHVIMARRRRERFTIFTNH  NNNNILRTRHSLLPFSK        TA+KWTPL A  
Sbjct: 121 NHYHVIMARRRRERFTIFTNH--NNNNILRTRHSLLPFSKVLQSSHQKTAIKWTPLMAT- 180

Query: 181 PVVLGNGRGKSSLPAVVASGSGETEDHKRRIPFIDFLGM 210
             VL +G G  +  A VA GS E ED KRR+PFIDFLGM
Sbjct: 181 -TVLRHGGGMLAPTATVAVGSDEREDQKRRVPFIDFLGM 215

[Close]

BLAST of Cla97C02G026730.2 vs. TAIR 10
Match: AT4G33450.1 (myb domain protein 69 )

HSP 1 Score: 186.8 bits (473), Expect = 1.8e-47
Identity = 89/142 (62.68%), Postives = 106/142 (74.65%), Query Frame = 0


Query: 24  SCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFS 83
           SC RGHWRP ED+ LRQLVEQ+GP+NWN+IA+H  GRSGKSCRLRWYNQLDPNI K PF+
Sbjct: 16  SCQRGHWRPVEDDNLRQLVEQYGPKNWNFIAQHLYGRSGKSCRLRWYNQLDPNITKKPFT 75

Query: 84  EEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIMARRRRERF--TIFTNHNNN 143
           EEEEERLL   ++ GN+WA IAR F GRTDNAVKNH+HVIMARR+RE F  T  +  N  
Sbjct: 76  EEEEERLLKAHRIQGNRWASIARLFPGRTDNAVKNHFHVIMARRKRENFSSTATSTFNQT 135

Query: 144 NNNILRTRHSLLPFSKTTAVKW 164
            + +L    SL   +++    W
Sbjct: 136 WHTVLSPSSSLTRLNRSHFGLW 157

[Close]

BLAST of Cla97C02G026730.2 vs. TAIR 10
Match: AT1G17950.1 (myb domain protein 52 )

HSP 1 Score: 184.9 bits (468), Expect = 7.0e-47
Identity = 82/107 (76.64%), Postives = 93/107 (86.92%), Query Frame = 0


Query: 25  CYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSE 84
           C RGHWRPAED KLR+LVEQFGP NWN IA+   GRSGKSCRLRW+NQLDP IN+NPF+E
Sbjct: 3   CSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPFTE 62

Query: 85  EEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIMARRRRER 132
           EEEERLL   ++HGN+W++IAR F GRTDNAVKNH+HVIMARR RER
Sbjct: 63  EEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRER 109

[Close]

BLAST of Cla97C02G026730.2 vs. TAIR 10
Match: AT1G73410.1 (myb domain protein 54 )

HSP 1 Score: 177.6 bits (449), Expect = 1.1e-44
Identity = 78/108 (72.22%), Postives = 91/108 (84.26%), Query Frame = 0


Query: 23  VSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPF 82
           + C RGHWRPAED KL+ LVEQ+GP NWN IA    GRSGKSCRLRW+NQLDP IN+NPF
Sbjct: 2   IMCSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNPF 61

Query: 83  SEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIMARRRRE 131
           +EEEEERLL   ++HGN+W++IAR F GRTDNAVKNH+HVIMARR R+
Sbjct: 62  TEEEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTRQ 109

[Close]

BLAST of Cla97C02G026730.2 vs. TAIR 10
Match: AT5G17800.1 (myb domain protein 56 )

HSP 1 Score: 172.2 bits (435), Expect = 4.7e-43
Identity = 81/115 (70.43%), Postives = 92/115 (80.00%), Query Frame = 0


Query: 19  GSSGVS---CYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDP 78
           G SG++   C RGHWRP ED KL++LV QFGPQNWN I+ H  GRSGKSCRLRW+NQLDP
Sbjct: 82  GKSGINTKVCSRGHWRPTEDAKLKELVAQFGPQNWNLISNHLLGRSGKSCRLRWFNQLDP 141

Query: 79  NINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIMARRRRE 131
            INK  F+EEEE RLL   + +GNKWALI+R F GRTDNAVKNH+HVIMARR RE
Sbjct: 142 RINKRAFTEEEEFRLLAAHRAYGNKWALISRLFPGRTDNAVKNHWHVIMARRTRE 196

[Close]

BLAST of Cla97C02G026730.2 vs. TAIR 10
Match: AT1G69560.1 (myb domain protein 105 )

HSP 1 Score: 171.4 bits (433), Expect = 8.0e-43
Identity = 79/114 (69.30%), Postives = 94/114 (82.46%), Query Frame = 0


Query: 18  GGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNI 77
           G SS  S  RGHWRPAED KL++LV  +GPQNWN IAE  +GRSGKSCRLRW+NQLDP I
Sbjct: 98  GHSSKASVSRGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRI 157

Query: 78  NKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIMARRRRER 132
           N+  F+EEEEERL+   +L+GNKWA+IAR F GRTDN+VKNH+HVIMAR+ RE+
Sbjct: 158 NRRAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMARKFREQ 211

The following BLAST results are available for this feature:

BLAST of Cla97C02G026730.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147366.1	1.4e-105	94.29	transcription factor MYB52 [Cucumis sativus] >KGN62164.1 hypothetical protein Cs...	[more]
KAA0040758.1	5.3e-105	94.29	transcriptional activator Myb [Cucumis melo var. makuwa] >TYK02073.1 transcripti...	[more]
XP_008460890.2	2.6e-104	94.26	PREDICTED: transcriptional activator Myb [Cucumis melo]	[more]
XP_038902736.1	2.6e-104	92.34	transcription factor MYB52-like [Benincasa hispida] >XP_038902737.1 transcriptio...	[more]
KAG6571346.1	8.8e-92	83.11	Transcription factor MYB52, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cla97C02G026730.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6R0C4	9.9e-46	76.64	Transcription factor MYB52 OS=Arabidopsis thaliana OX=3702 GN=MYB52 PE=2 SV=1	[more]
Q9FX36	1.6e-43	72.22	Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=1 SV=1	[more]
Q5NBM8	3.5e-43	64.62	Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV...	[more]
Q6R053	6.6e-42	70.43	Transcription factor MYB56 OS=Arabidopsis thaliana OX=3702 GN=MYB56 PE=1 SV=1	[more]
Q9SEZ4	1.1e-41	69.30	Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1	[more]

BLAST of Cla97C02G026730.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LM98	6.8e-106	94.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G302300 PE=4 SV=1	[more]
A0A5D3BQW6	2.6e-105	94.29	Transcriptional activator Myb OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3CEN7	1.3e-104	94.26	transcriptional activator Myb OS=Cucumis melo OX=3656 GN=LOC103499632 PE=4 SV=1	[more]
A0A6J1EVU5	1.0e-90	82.19	transcription factor CSA-like OS=Cucurbita moschata OX=3662 GN=LOC111438332 PE=4...	[more]
A0A6J1I2H4	4.0e-90	81.74	transcription factor CSA-like OS=Cucurbita maxima OX=3661 GN=LOC111470309 PE=4 S...	[more]

BLAST of Cla97C02G026730.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33450.1	1.8e-47	62.68	myb domain protein 69	[more]
AT1G17950.1	7.0e-47	76.64	myb domain protein 52	[more]
AT1G73410.1	1.1e-44	72.22	myb domain protein 54	[more]
AT5G17800.1	4.7e-43	70.43	myb domain protein 56	[more]
AT1G69560.1	8.0e-43	69.30	myb domain protein 105	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 78..126 e-value: 9.7E-14 score: 61.7 coord: 26..75 e-value: 1.1E-13 score: 61.5
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 27..73 score: 10.882227
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 74..124 score: 8.81522
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 30..71 e-value: 4.91483E-13 score: 59.5114
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 81..121 e-value: 3.48572E-10 score: 51.8074
None	No IPR available	PFAM	PF13921	Myb_DNA-bind_6	coord: 30..90 e-value: 4.7E-18 score: 65.2
None	No IPR available	GENE3D	1.10.10.60		coord: 26..78 e-value: 1.4E-23 score: 84.6
None	No IPR available	GENE3D	1.10.10.60		coord: 80..150 e-value: 4.9E-16 score: 60.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR45614	MYB PROTEIN-RELATED	coord: 19..147
None	No IPR available	PANTHER	PTHR45614:SF100	MYB TRANSCRIPTION FACTOR	coord: 19..147
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..25 score: 6.0
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 78..128 score: 18.979927
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 27..77 score: 22.758425
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 25..120

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla97C02G026730	Cla97C02G026730	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C02G026730.2-exon	Cla97C02G026730.2-exon-Cla97Chr02:472671..472922	exon
Cla97C02G026730.2-exon	Cla97C02G026730.2-exon-Cla97Chr02:473929..474366	exon
Cla97C02G026730.2-exon	Cla97C02G026730.2-exon-Cla97Chr02:475140..475580	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C02G026730.2-three_prime_utr	Cla97C02G026730.2-three_prime_utr-Cla97Chr02:472671..472884	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C02G026730.2-cds	Cla97C02G026730.2-cds-Cla97Chr02:472885..472922	CDS
Cla97C02G026730.2-cds	Cla97C02G026730.2-cds-Cla97Chr02:473929..474366	CDS
Cla97C02G026730.2-cds	Cla97C02G026730.2-cds-Cla97Chr02:475140..475323	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C02G026730.2-five_prime_utr	Cla97C02G026730.2-five_prime_utr-Cla97Chr02:475324..475580	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla97C02G026730.2	Cla97C02G026730.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding