Cla97C01G006450.1 (mRNA) Watermelon (97103) v2.5

Overview
NameCla97C01G006450.1
TypemRNA
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr01: 6403982 .. 6407154 (-)
Sequence length396
RNA-Seq ExpressionCla97C01G006450.1
SyntenyCla97C01G006450.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGGAGAGGGAGATCGAGAACAGAGGGAGACGAGGGAAGAGGGAGAGTTGCACAGACCGAGAGCAAAGGGAGATCGAGAGAAGAGGGAGAGTTACATAGACCGAGAGCAGCGTAAGGACCAAGGGCACGGGAGAGTCACTCGTGAGGGAGAGGAAAGCGGCAAACAAAATGAAGATTGAAAAAGATACAAAACCCTAATTTGAAATTTCATTTTCACTTATAATATATATATATATATATATATATATATGTATAAAATTAGTAATTCGGGTTGGGTTGGGTCAATCCGAATTTTGAAAATTTCAACCCGAGACACAACCCAACCCGAAAAAAACCAAATAAAATAACCCAACCCAACCCTTCTACTTCAGGTTGGGTAGTCCGGGTTGTTTAGGTTGTCGGGTTATTTGAACACCCCTAAGGAAACCTCCTTGGCTCCACACTGGGAAATGGCAAAACATTCTGCACCACGCTTTCGACCCTGTGACACCATGTCTTATGGGTGTGATATTTAAAGGCTAAATTATAAAAAATGCCTTTGAACTATGCACTTTGCGTAAAAAATGCCCATAAACTTTCAAAAATTTCAAAAATACCCTTAAACTTTCAGAAAGAAAGAGTTTAAAAATACTATTGTCCTTAGTTTTCGATGGAAACCGTTAAAATTTTGTTTCAAAAATACCCCTCAACTTTTCAAAAGTTTCAAAAATGCCCTTCACTAAAAAAAAGTTCAAAAATACCGTAAGTATATGAACATAAATCATTAATACCTCGTTGCAAAAATAACTTTAAAATTAAAAAAAAATAAAAAAATAAAAAAATAAAATTGCTCCAAACATTAATATTGTGATTAATTTATTTGAAGTTTTCTTAAGTTAGAAAAGAATTAATTTTAAAACAAATTATATAGATATATTCATTTTTTTATAGAGATACTCTTATTTTTCTCTTAATTTTTCAATTCTTAGCTTACACCAATTTTCCCACCAACCAAAATTTTAAGTTAAAACATAAAATATCACAAAATTCTAAAATCAAAATCTCCCCTTCAATATACCAAAACGACAAATAATCAATAATAAAAAATGTATTCGGTTATTAACACACACTCAACTACTAACATACGACTTTGTTAAAAGATTTATGTCCTAAATCCCTGATGATTCCTCTTTCTTCTTATTATAGTCCATATACCTTAACTGGAGTGTGCAATTTCACTCATTCATTTATTTTAGATAAACAAATGTCACACAATTAACAAAAAGGGAGAGTAAGAGGGTATTGAAGAAGGGAGGGGAGAAAAAAGATGGACAATAGAGAAGTAAAGCGACATTGACGGTTTTTATTCACACAACAGAAAGAGTATTTTTGAACTCATTTTGAAAGTTTAAGGGTATTTTTGAAACTTTTGAAAGTTAGAGATATTTTTGACACAAAGTATAAAGTTTAGGGGTATTTTGTATAATTTAGCCTATTTTAAAATTTTAAACTTAAAAAATATATGTGTTTAGTTTTATGAAAAATGAGACACTCAAAATTAAACAAAAATCATAAGGATCTCTATAGTAAAGAATTTGAAAACAAGGGATTCAATAAAAACAAAACTGTATTTCATGTTTTTAGATATGTGTTTGGTAGCAGATTATGGGCTCCTTTAGATTAACTTAAAAAATAGAGACAGTTGCAAATATAACAATCAGGATCAAAGTATTTATAGATATAATATAATGCAAAAAAAAAAAAAATGCAAATATAGCAAAATTTAGATTTTTCTTTCAAAGTCTATTAGCAATTGATCATATTAATAACGGGGTCTATCAATGATATACCATAATACTGATAGAGTCTATCATTGATAAGTTTTGTTATATTTGTAATTTTTAAAAAATGTTGCTGCACAACTAATTATTATCGCTAAAAGTGTTATCCAATGCAATTATTCGAAAATAAATGTTTCCAAAAATTCATTTTCATTTAAACATTTTTATAAGAACTGTTTGAAATAAATACACTAATGGGTTTCAAAATCAATTTTGAGTGGTTGTCAAACATGTATCTTTCTTTTTAAATGACTTGTTTTTTTTAATTAAATATTTGAAAAAGTATTCCAAACACACTCAAAGAAATTGAATTTTAATTTAATCAGTACTTTAAAATGTGTGATGATTATTTTGTAGTATTATATAACCTATAATGTAGTACATAATACATCTTCTATTTTTTTAAAAATTAATTGAATTTAAAACATGATTATATTTTTAAATTTTTTATTTTTATTTAATATAATTTTATATTTTAAAATTTAAAATTCAAAATCTGTAGGGTGAAAACATATAAAAGTTGTTTTTAGAATTTACGCTACAAAATTTGGAAACGATTTTTAACCAAAATTCTTTACCAAATAACCCTTATTTTTTTCATTTTAATTTGAAGCATTTTTCTTTTTAAAATAAAACCTACAACCAAATCTTCATCTTCTTCTCTTCCCCTCCCTCTCATTGTCGTGAAAAGAGGCCAGCCGCAGCTCCTCCCCTTTTCGTTTCAGTCCCGGCACGGCCACCTAGCACAGAAACCCACAACGCCTTTCCTTTCCGGAGACGGGCACCTCCGATTTTGCGACCCACACGAATCTGGCGAGTTAAAGCGTGCGAATCCTTTGCTCGAGTTTTGGTAACTACCCATTCTATTTCCACCAAATATTTGAGTTACTCGCTTCTTAACTGCTTAAATAGGTAGGATTAAGCGTATTCGGACATGTTTCCTTTAGGATTCAAGTCCATTTGGATAAGTTTCAGTGGGTAGAACACTCTAAATATCCTTTCTAACTACTTTAAGGTTCTTTTAAGTTTGTCTCTAATATTTGTAATACTTGAAAGCTCGTATTTGTAGATCTGGAGTATTTTTGGAACTATCTGAACACTTTTTAGTGAGGACCCAAGATGTTTTTGTGAGTTTTAGCCATTAGAACTCTATTTAGATCCTTTTGGAATTAAATTAAAGTGCCGTAAATTAGTTTATAACTTTGGATATTCTCTATTTCTAGTTTAGACTCAGATTTGAGGCTTTCGGACTAAGGTTGAAGGTTGCTTTGGGTATGAATTATGATTACTCATTTTCGAGCACTTTTGAGACTCTGAATCAAGTTCTAGGTAAGTGGAATTCTACTTGA

mRNA sequence

ATGAGAGGAGAGGGAGATCGAGAACAGAGGGAGACGAGGGAAGAGGGAGAGTTGCACAGACCGAGAGCAAAGGGAGATCGAGAGAAGAGGGAGAGTTACATAGACCGAGAGCAGCGTAAGGACCAAGGGCACGGGAGAGTCACTCTCCCGGCACGGCCACCTAGCACAGAAACCCACAACGCCTTTCCTTTCCGGAGACGGGCACCTCCGATTTTGCGACCCACACGAATCTGGCGAGTTAAAGCGTGCGAATCCTTTGCTCGAGTTTTGTTTAGACTCAGATTTGAGGCTTTCGGACTAAGGTTGAAGGTTGCTTTGGGTATGAATTATGATTACTCATTTTCGAGCACTTTTGAGACTCTGAATCAAGTTCTAGGTAAGTGGAATTCTACTTGA

Coding sequence (CDS)

ATGAGAGGAGAGGGAGATCGAGAACAGAGGGAGACGAGGGAAGAGGGAGAGTTGCACAGACCGAGAGCAAAGGGAGATCGAGAGAAGAGGGAGAGTTACATAGACCGAGAGCAGCGTAAGGACCAAGGGCACGGGAGAGTCACTCTCCCGGCACGGCCACCTAGCACAGAAACCCACAACGCCTTTCCTTTCCGGAGACGGGCACCTCCGATTTTGCGACCCACACGAATCTGGCGAGTTAAAGCGTGCGAATCCTTTGCTCGAGTTTTGTTTAGACTCAGATTTGAGGCTTTCGGACTAAGGTTGAAGGTTGCTTTGGGTATGAATTATGATTACTCATTTTCGAGCACTTTTGAGACTCTGAATCAAGTTCTAGGTAAGTGGAATTCTACTTGA

Protein sequence

MRGEGDREQRETREEGELHRPRAKGDREKRESYIDREQRKDQGHGRVTLPARPPSTETHNAFPFRRRAPPILRPTRIWRVKACESFARVLFRLRFEAFGLRLKVALGMNYDYSFSSTFETLNQVLGKWNST
Homology
The following BLAST results are available for this feature:
BLAST of Cla97C01G006450.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C01G006450.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C01G006450.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C01G006450.1 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..46

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cla97C01G006450Cla97C01G006450gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C01G006450.1-exonCla97C01G006450.1-exon-Cla97Chr01:6403982..6404107exon
Cla97C01G006450.1-exonCla97C01G006450.1-exon-Cla97Chr01:6404481..6404605exon
Cla97C01G006450.1-exonCla97C01G006450.1-exon-Cla97Chr01:6407010..6407154exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C01G006450.1-cdsCla97C01G006450.1-cds-Cla97Chr01:6403982..6404107CDS
Cla97C01G006450.1-cdsCla97C01G006450.1-cds-Cla97Chr01:6404481..6404605CDS
Cla97C01G006450.1-cdsCla97C01G006450.1-cds-Cla97Chr01:6407010..6407154CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cla97C01G006450.1Cla97C01G006450.1-proteinpolypeptide