ClCG11G013350.1 (mRNA) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG11G013350.1
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Unknown protein
Location	CG_Chr11: 26594180 .. 26594413 (+)
Sequence length	234
RNA-Seq Expression	ClCG11G013350.1
Synteny	ClCG11G013350.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGACGAAGATGATATGGCGATGGAGAGACGACACTGTCAGAGAGGCACTGCGAATGGCGGCGCAGTGAGGGGGGGAGGCTGTGCAGCGAGGGAGAGAACGACTGCACTACTTACGGCTACCAATGGCGGTATCGTCGCCGCCGGGAAATCGTCTTCGGCGAGCCGTCTCGACTGGCAGTCGGCGATTGGTCGCGTGCTTAGATATTCAGCGTGCGCGTGTGAGAGATGA

mRNA sequence

ATGAGAGACGAAGATGATATGGCGATGGAGAGACGACACTGTCAGAGAGGCACTGCGAATGGCGGCGCAGTGAGGGGGGGAGGCTGTGCAGCGAGGGAGAGAACGACTGCACTACTTACGGCTACCAATGGCGGTATCGTCGCCGCCGGGAAATCGTCTTCGGCGAGCCGTCTCGACTGGCAGTCGGCGATTGGTCGCGTGCTTAGATATTCAGCGTGCGCGTGTGAGAGATGA

Coding sequence (CDS)

ATGAGAGACGAAGATGATATGGCGATGGAGAGACGACACTGTCAGAGAGGCACTGCGAATGGCGGCGCAGTGAGGGGGGGAGGCTGTGCAGCGAGGGAGAGAACGACTGCACTACTTACGGCTACCAATGGCGGTATCGTCGCCGCCGGGAAATCGTCTTCGGCGAGCCGTCTCGACTGGCAGTCGGCGATTGGTCGCGTGCTTAGATATTCAGCGTGCGCGTGTGAGAGATGA

Protein sequence

MRDEDDMAMERRHCQRGTANGGAVRGGGCAARERTTALLTATNGGIVAAGKSSSASRLDWQSAIGRVLRYSACACER

Homology

The following BLAST results are available for this feature:

BLAST of ClCG11G013350.1 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG11G013350.1 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG11G013350.1 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG11G013350.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG11G013350	ClCG11G013350	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG11G013350.1-exon	ClCG11G013350.1-exon-CG_Chr11:26594180..26594413	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG11G013350.1-cds	ClCG11G013350.1-cds-CG_Chr11:26594180..26594413	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG11G013350.1	ClCG11G013350.1-protein	polypeptide